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Search Burkholderia and Pseudomonas databases

You may use this search function to search both Burkholderia spp. and Pseudomonas spp. annotations and/or sequences and then compare selected annotations. By default, wild cards are enabled for all searches.
Note: Hint for improving your search results

Simple Search

  Search all genomes by   Explanation of Simple Search Fields ExactExplanation of Exact search   

Advanced Boolean search of updated annotations


Please select from one or more of these genomes: (required)


All Genomes
Burkholderia cenocepacia AU 1054
Pseudomona aeruginosa PAO1
Burkholderia cenocepacia HI2424
Pseudomonas aeruginosa PA14
Burkholderia cenocepacia MC0-3
Pseudomonas aeruginosa PA7
Burkholderia cepacia AMMD
Pseudomonas entomophila L48
Burkholderia mallei ATCC 23344
Pseudomonas fluorescens Pf-5
Burkholderia pseudomallei K96243
Pseudomonas fluorescens PfO-1
Burkholderia sp. 383
Pseudomonas mendocina ymp
Burkholderia thailandensis E264
Pseudomonas putida KT2440
Burkholderia vietnamiensis G4
Pseudomonas putida F1
Burkholderia xenovorans LB400
Pseudomonas putida W619
Pseudomonas stutzeri A1501
Pseudomonas syringae B728a
Pseudomonas syringae DC3000
Pseudomonas syringae phaseolicola 1448A

We discourage searches of the original Pseudomonas aeruginosa PAO1 annotation since it is not updated, however, if you wish to search it you can find it here: Pseudomonas aeruginosa PAO1 (Sep2000)

Filter transposon mutantsExplanation of Filter by Transposon Mutant search

Filter human homologs?

Specify subcellular localization(s) Explanation of Localization Classes:
All (Including unknown/unassigned)
Cytoplasmic Cytoplasmic Membrane Periplasmic
Extracellular Fimbrial Flagellar
Outer Membrane
Confidence Rating(s) Explanation of Localization Classes:
Class 1 Class 2
Class 3 Unclassified

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Exact Explanation of Wildcard search
Exact Explanation of Wildcard search
Exact Explanation of Wildcard search
Exact Explanation of Wildcard search

Search hint: We also recommend, as a complement to searching the annotations, that you search, using BLAST, for homologs to a protein of interest, to find additional genes/proteins of interest that may have annotations that don't show up in your annotation search (i.e. if you want all homologs of a particular membrane protein, but the particular membrane protein has been named differently by different Burkholderia Genome Projects). From a BLAST search you can also select genes/proteins of interest for further study, and compare them using the Compare feature with other genes/proteins you hold on your clipboard.

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