"Strain","Refseq Accession (Replicon)","Replicon Name","Locus Tag","Feature Type","Start","Stop","Strand","Gene Name","Product Name","Product Name Rating","Refseq Accession","GI","Entrez","Alternate Gene Name(s)","Alternate Product Names","Comments","References","Genomic Context","Homology","Structure Features","Pathways","EC Number","PseudoCAP Function Class","Subcellular Localization (Localization[Localization Confidence]","Gene Ontology Mappings(NameSpace|Accession|Term|Evidence Code)","TIGRFAM Predictions Using HMMER (Accession|Name|Function|IsologyType|Significance|EC Number|Role|Sub-role)","PFAM Predictions (Accession|Name|Start|Stop|E-value)","COG Predictions (Accession|Name[Category])","DNA Sequence","Protein Sequence"
"Pseudomonas syringae pv. tomato str. DC3000","NC_004578","Chromosome","","misc_featu","4543843","4563492","+","","","","","","","","","Also known as AvrPphE ; Also known as AvrPpiB2 ; Annotation based in part on location in a cluster of genes. ; Annotation is based in part on position in a cluster of transfer genes. ; identified by Glimmer2 ; identified by match to PFAM protein family HMM PF00392 ; identified by match to PFAM protein family HMM PF00991 ; identified by match to PFAM protein family HMM PF01183 ; identified by match to PFAM protein family HMM PF01839 ; identified by match to PFAM protein family HMM PF01850 ; identified by match to PFAM protein family HMM PF02534 ; identified by match to PFAM protein family HMM PF03132 ; identified by match to PFAM protein family HMM PF04066 ; Previously known as HopPtoO (PMID 11872842 ; Previously known as ORF16 (PMID 12032338 ; similar to GP:10177641 ; similar to GP:11640739,  and GP:11640735 ; similar to GP:12750993 ; similar to GP:12750993,  and SP:P55681 ; similar to GP:13259619 ; similar to GP:13926144,  and GP:13926145 ; similar to GP:13926145 ; similar to GP:13926145,  and GP:13926145 ; similar to GP:13926146 ; similar to GP:13926146,  and SP:P23789 ; similar to GP:13926148,  and GP:12053565 ; similar to GP:14488264 ; similar to GP:14488264,  and GP:14488264 ; similar to GP:15667830,  and GP:15667830 ; similar to GP:17431229,  and GP:17982579 ; similar to GP:17865161 ; similar to GP:18077101,  and SP:P22996 ; similar to GP:18077120 ; similar to GP:18077120,  and GP:18077120 ; similar to GP:18077130,  and GP:18077130 ; similar to GP:20521608 ; similar to GP:2664218 ; similar to GP:3064140 ; similar to GP:4512491 ; similar to GP:4512492 ; similar to GP:4512493,  and GP:4903127 ; similar to GP:4512493,  and GP:4903134 ; similar to GP:4512494 ; similar to GP:4512494,  and GP:4512494 ; similar to GP:4512503 ; similar to GP:4512506 ; similar to GP:4512507 ; similar to GP:4512511 ; similar to GP:4512515,  and GP:4512515 ; similar to GP:4512515,  and GP:4903111 ; similar to GP:4512516 ; similar to GP:4512517 ; similar to GP:4512517,  and GP:4512517 ; similar to GP:4512518,  and GP:4512518 ; similar to GP:4512530 ; similar to GP:4512530,  and GP:4512530 ; similar to GP:4903109 ; similar to GP:4903116 ; similar to GP:4903116, SP:P27190,  and GP:4929009 ; similar to GP:4903117 ; similar to GP:4903118 ; similar to GP:4903118, GP:4903117,  and GP:4903117 ; similar to GP:4903121 ; similar to GP:4903121,  and GP:4903121 ; similar to GP:4903124 ; similar to GP:4903126 ; similar to GP:4903127 ; similar to GP:4903128 ; similar to GP:4903136,  and SP:O68609 ; similar to GP:498885 ; similar to GP:5123486,  and GP:5123486 ; similar to GP:5123487,  and GP:5123487 ; similar to GP:5758947,  and GP:5758947 ; similar to GP:6273613 ; similar to GP:8117184 ; similar to GP:8117185,  and GP:5123481 ; similar to GP:8572766 ; similar to GP:9187579 ; similar to GP:9187580 ; similar to SP:P05839 ; similar to SP:P05839,  and SP:P05839 ; similar to SP:P22899,  and GP:5123485 ; similar to SP:P22899,  and SP:P22899 ; similar to SP:P27190 ; similar to SP:Q52561,  and SP:Q52561 ; similar to SP:Q52562,  and SP:Q52562 ; The annotation of this disrupted copy of a multicopy IS21 family element is based in part on an HMM match, the ISFinder database, and on positional information. ; The annotation of this multicopy IS21 family element is based in part on an HMM match, the ISFinder database, and on positional information. ; The C-terminal 20 amino acids of this gene are encoded by an IS element that has inserted into the original translational stop codon. ; This gene assignment is based in part on its location adjacent to a gene for resolvase. ; This gene assignment is based in part on its location adjacent to a Tn3 family transposase. ; PYOCIN001; Putative bacteriocin; Pyocin F-like; Possible F-type Pyocin. Integrated between trpE and trpG genes like P. aeruginosa pyocin. NO capsid or head genes. Tail genes have best hits to Lambdoid phages like Coliphage P27. Note that HopPtoH and HopPtoC are just outside of this region. ; ICEland; putative integrative and onjugative element, degenerate; includes genes for type III effectors HopAJ1, HopAT1', HopD1, HopQ1-1, and HopR1 ; PHAGE02; putative prophage; defective prophage region; no integrase found. ; PHAGE03; putative prophage; putative P2-like integrated prophage; attL/R=a[gt]tggaaatcttcaaa.  Targeted end5 of ORF08953 - 6-pyruvoyl tetrahydrobiopterin syntase ; PHAGE04; putative prophage; defective prophage region; integrase nearby, but likely a Shufflon recombinase for pillin phase variation. Several hypotheticals near shufflon recombinase - pili? ; PHAGE05; putative prophage; defective prophage region.  AvrPto nearby, but also many Tn genes. ; PHAGE06; putative prophage; putative lysogenic prophage region.","","Upstream genes include probable acyl-CoA dehydrogenase, probable enoyl-CoA hydratase/isomerase, probable acyl-CoA dehydrogenase, and probable acyl-CoA thiolase. As with other PhaK homologs, this is probably the transport protein associated with whatever substrate these enzymes are catabolizing. ; Cluster of genes probably involved in carbon compound catabolism ; Downstream of glp regulon. ; Part of glp regulon ; Part of glp regulon ; Part of glp regulon ; Part of glp regulon ; Adjacent to a probable MFS family efflux transporter. ; Adjacent to a probable transcriptional regulator (tetR-family). ; Part of mmsAB operon ; Part of mmsAB operon ; Adjacent to mmsAB operon ; Part of mmsAB operon ; clustered with pstI and fruA. ; clustered with fruKAR ; clustered with ptsI and fruK. ; One of 7 genes homologous to a 7-gene cluster reported to be regulated by PmrA/B in Salmonella typhimurium ; One of 7 genes homologous to a 7-gene cluster reported to be regulated by PmrA/B in Salmonella typhimurium ; One of 7 genes homologous to a 7-gene cluster reported to be regulated by PmrA/B in Salmonella typhimurium ; One of 7 genes homologous to a 7-gene cluster reported to be regulated by PmrA/B in Salmonella typhimurium ; One of 7 genes homologous to a 7-gene cluster reported to be regulated by PmrA/B in Salmonella typhimurium ; One of 7 genes homologous to a 7-gene cluster reported to be regulated by PmrA/B in Salmonella typhimurium ; 18-kb alginate biosynthetic operon ; b2253-b2257 (Ecoli) ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; 18-kb alginate biosynthetic operon ; Adjacent gene is homologous to other bacterioferritin-associated ferredoxins. Other genes with probable redox-related functions are close by. ; Several other genes with probable redox-related functions are in the neighborhood. ; clustered with the gene dowstream ; clustered with probable mexE and mexF ; b1627-1633 (Ecoli) ; rnfABCDGE (Rhodobacter capsulatus) ; b1627-1633 (Ecoli) ; HI1683-1688 (H. influenzae) ; HI1683-1688 (H. influenzae) ; b1627-1633 (Ecoli) ; HI1683-1688 (H. influenzae) ; rnfABCDGE (Rhodobacter capsulatus) ; b1627-1633 (Ecoli) ; rnfABCDGE (Rhodobacter capsulatus) ; HI1683-1688 (H. influenzae) ; b1627-1633 (Ecoli) ; b1627-1633 (Ecoli) ; HI1683-1688 (H. influenzae) ; rnfABCDGE (Rhodobacter capsulatus) ; rnfABCDGE (Rhodobacter capsulatus) ; HI1683-1688 (H. influenzae) ; b1627-1633 (Ecoli) ; Part of rhlAB gene cluster. ; Conserved location adjacent to metG. ; rnfABCDGE (Rhodobacter capsulatus) ; Part of rhlAB gene cluster. ; b0933-b0937 (E. coli) ; b0933-b0937 (E. coli) ; b0933-b0937 (E. coli) ; b0933-b0937 (E. coli) ; Adjacent gene encodes GTP cyclohydrolase I, the first step in the tetrahydrobiopterin biosynthetic pathway. ; The adjacent gene is homologous to folX, another gene in tetrahydrobiopterin biosynthetic pathway. ; FecR-like proteins are usually next to sigma-factor genes as this one is and are part of expression regulation systems. This one could be involved in the expression of the Has genes which are directly adjacent. ; Likely part of Has gene cluster. However, this is not the best PA01 homolog of Serratia marcescens HasF. ; Part of conserved nosLYFDZR gene cluster. ; Part of conserved nosLYFDZR gene cluster. ; Part of conserved nosLYFDZR gene cluster. ; Part of conserved nosLYFDZR gene cluster. ; Part of conserved nosLYFDZR gene cluster. ; Part of conserved nosLYFDZR gene cluster. ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; phnC-N,P (Escherichia coli) ; amiEBCRS (Pseudomonas aeruginosa) ; amiEBCRS (Pseudomonas aeruginosa) ; amiEBCRS (Pseudomonas aeruginosa) ; amiEBCRS (Pseudomonas aeruginosa) ; amiEBCRS (Pseudomonas aeruginosa) ; Adjacent gene is homologous to the adjacent H. influenzae gene, HI1600. ; Adjacent to an acyl-carrier-protein synthase. ; Adjacent gene is homologous to adjacent H. influenzae gene, HI1601. ; Part of conserved minEDC gene cluster. ; Part of conserved minEDC gene cluster. ; Part of conserved minEDC gene cluster. ; Not conserved with B. subtilis. ; Adjacent to other glycolytic/pentose phosphate pathway enzymes. ; Adjacent to other glycolytic/pentose phosphate pathway enzymes. ; Adjacent to other glycolytic/pentose phosphate pathway enzymes. ; Adjacent to other glucose phosphorylative pathway enzymes and sensor protein. ; Adjacent to membrane & ATP-binding subunits. ; Adjacent to substrate-binding & ATP-binding subunits. ; Adjacent to substrate-binding & ATP-binding subunits. ; Adjacent to substrate-binding & membrane subunits. ; Adjacent to 4 ORFs probably producing a glucose transporter. ; Adjacent to zwf, as in E. coli. ; Other genes involved in aromatic amino acid biosynthesis are in the vicinity. ; In cluster with aroA, cmk & himD, as in E. coli. ; In cluster with aroA, cmk & rpsA, as in E. coli. ; Adjacent to hisF. Both of these have paralogs elsewhere, in a locus that also includes hisB and hisA. ; Adjacent to hisH. Both of these have paralogs elsewhere, in a locus that also includes hisB and hisA. ; Near IS1209 element. ; This ORF and adjacent ORF appear to be fragments of a transposon IS element. Pyocin genes are curiously close by. ; This ORF and adjacent ORF appear to be fragments of a transposon IS element. Pyocin genes are curiously close by. ; Adjacent to emrA homolog ; This ORF and adjacent ORF appear to be fragments of a transposon IS element. Pyocin genes are curiously close by. ; Adjacent to emrB homolog ; 5' genes encode LeuCD, 3' gene encodes LeuB ; Local gene organization conserved with E. coli. ; Adjacent to an ORF with some similarity to batB, as in Bacteroides. ; Adjacent to yqjD homolog, as in E. coli. ; Adjacent to yqjE homolog, as in E. coli. ; Adjacent to good homologs of moaB and moeA. A separate locus includes additional copies of moaB and moeA as well as three other molybdopterin biosynthetic genes. ; Adjacent to a homolog of mobA, also involved in synthesis of molybdopterin. In E. coli, molybdopterin co-factor genes moaABCDE are clustered. In P. aeruginosa, homologs of moaBCDE are clustered, separate from the two moaA homologs. A second moaB homolog also exists. ; In a locus with two other molybdopterin biosynthetic gene homologs. A separate locus contains five molybdopterin biosynthetic gene homologs, including another paralog of MoeA. ; Part of conserved foaAB gene cluster. ; Part of conserved foaAB gene cluster. ; Adjacent to lexA gene. ; 6-gene cluster identical in gene order to that of V. alginolyticus ; 6-gene cluster identical in gene order to that of V. alginolyticus ; 6-gene cluster identical in gene order to that of V. alginolyticus ; 6-gene cluster identical in gene order to that of V. alginolyticus ; 6-gene cluster identical in gene order to that of V. alginolyticus ; 6-gene cluster identical in gene order to that of V. alginolyticus ; Part of a 3-gene cluster conserved with E. coli. ; Part of a 3-gene cluster conserved with E. coli. ; Part of a 3-gene cluster conserved with E. coli. ; Adjacent to genes for alpha and beta subunits of another electron transfer flavoprotein ; Adjacent to gene for alpha subunit and to a gene similar to eucaryotic electron transfer flavoprotein-ubiquinone oxidoreductase. ; Adjacent to gene for beta subunit and to a gene similar to eucaryotic electron transfer flavoprotein-ubiquinone oxidoreductase. ; In cluster of cobalamin biosynthetic locus ; Part of hisPMQJ gene cluster conserved with E. coli. ; Part of hisPMQJ gene cluster conserved with E. coli. ; Part of hisPMQJ gene cluster conserved with E. coli. ; cluster of cobalamin biosynthetic genes. ; In a cluster of cobalamin biosynthetic genes. ; In cluster of cobalamin biosynthetic genes. ; Cluster of cobalamin biosynthetic genes. ; Cluster of cobalamin biosynthetic genes. ; Cluster of cobalamin biosynthetic genes. ; Cluster of cobalamin biosynthetic genes ; Not associated with an ATPase. Adjacent to cluster of cobalamin biosynthetic genes ; adjacent to probable outer membrane protein. ; This 1 of an apparent 8-gene cluster involved in some kind of fatty acid metabolism with interesting homologies to eukaryotic and M. tuberculosis enzymes. ; This 1 of an apparent 8-gene cluster involved in some kind of fatty acid metabolism with interesting homologies to eukaryotic and M. tuberculosis enzymes. ; This 1 of an apparent 8-gene cluster involved in some kind of fatty acid metabolism with interesting homologies to eukaryotic and M. tuberculosis enzymes. ; This 1 of an apparent 8-gene cluster involved in some kind of fatty acid metabolism with interesting homologies to eukaryotic and M. tuberculosis enzymes. ; This 1 of an apparent 8-gene cluster involved in some kind of fatty acid metabolism with interesting homologies to eukaryotic and M. tuberculosis enzymes. ; This 1 of an apparent 8-gene cluster involved in some kind of fatty acid metabolism with interesting homologies to eukaryotic and M. tuberculosis enzymes. ; Putative operon, adjacent to emrK-like ORF. Same organization as seen in E. coli ; Adjacent to MFS transporter ; This 1 of an apparent 8-gene cluster involved in some kind of fatty acid metabolism with interesting homologies to eukaryotic and M. tuberculosis enzymes. ; Downstream of rpmI, as in E. coli. ; Between infC & rplT, as in E. coli. ; 3rd gene in cluster of three (pfeRSA) ; pfeRSA ; 2nd gene in cluster of three (pfeRSA) ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; NADH dehyrogenase cluster organization like that of E. coli. nuoA-N ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; Flanking gene arrangement is preserved with E. coli ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) ; nuoA-N (Ecoli) gi|1788622 ; forms an operon with GacA upstream ; flanking gene arrangement is preserved with E. coli ; Context not conserved with E. coli ; Part of a two gene cluster conserved with E. coli. ; Part of a two gene cluster conserved with E. coli. ; Gene cluster similar to the yegMNO of E. coli ; Gene cluster similar to the yegMNO of E. coli ; Gene cluster similar to the yegMNO of E. coli ; 1 of 5 genes in a cluster with compelling homology to the R. eutropha czc cation efflux system. ; 1 of 5 genes in a cluster with compelling homology to the R. eutropha czc cation efflux system. ; 1 of 5 genes in a cluster with compelling homology to the R. eutropha czc cation efflux system. ; 1 of 5 genes in a cluster with compelling homology to the R. eutropha czc cation efflux system. ; Part of a 3 gene cluster (antABC) conserved with Acinetobacter. ; 1 of 5 genes in a cluster with compelling homology to the R. eutropha czc cation efflux system. ; Part of a 3 gene cluster (antABC) conserved with Acinetobacter. ; Part of a 4 gene cluster (catRBCA) conserved with Pseudomonas putida. ; Part of a 4 gene cluster (catRBCA) conserved with Pseudomonas putida. ; Part of a 3 gene cluster (antABC) conserved with Acinetobacter. ; Part of a 4 gene cluster (catRBCA) conserved with Pseudomonas putida. ; Part of a 4 gene cluster (catRBCA) conserved with Pseudomonas putida. ; Part of the mexEF-oprN operon ; Part of the mexEF-oprN operon ; Part of MexEF-OprN operon ; Similar context as paralog ; near a two-component regulatory system. ; Separated from gentisate 1,2-dioxygenase by one intervening gene. This transporter probably transports aromatic compounds that can be metabolized by the gentisate pathway. ; Adjacent to gentisate 1,2-dioxygenase, as in Sphingomonas and Pseudomonas sp. U2 ; Adjacent to one of the three glyA homologs and to gcvP. ; In cluster with other genes involved in glycine metabolism, but not identical to the gcv operon of E. coli. ; Adjacent to a weak HflC homolog. ; Adjacent to a weak HflK homolog. ; Adjacent to a weak HflC homolog. ; pvdD,fpvA,pvdEF (Pseudomonas aeruginosa) ; pvdD,fpvA,pvdEF (Pseudomonas aeruginosa) ; pvdD,fpvA,pvdEF (Pseudomonas aeruginosa) ; Part of msuEDC gene cluster. ; pvdD,fpvA,pvdEF (Pseudomonas aeruginosa) ; Part of msuEDC gene cluster. ; Part of msuEDC gene cluster. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; 1 of 8 contiguous genes conserved with P. fluorescens and involved in sugar uptake and metabolism. Some have demonstrated functions, others have only predictions. ; Adjacent to gene cluster involved in gluconate uptake. ; Adjacent to gluconokinase & transcriptional regulator . ; Adjacent to transcriptional regulator and gluconate permease. ; Adjacent to gluconokinase and gluconate permase. ; Adjacent to rpmA, as in E. coli. ; Adjacent to rplU, as in E. coli. ; Parallel gene arrangement to E. coli and other bacteria: feoA/B ; Parallel gene arrangement to E. coli and other bacteria: feoA/B ; Local organization conserved with E. coli. ; 6th in a cluster of 7 genes involved in acetoin catabolism. ; 5th in a cluster of 7 genes involved in acetoin catabolism. ; 4th in a cluster of 7 genes involved in acetoin catabolism. ; 3rd in a cluster of 7 genes involved in acetoin catabolism. ; 1st in a cluster of 7 genes involved in acetoin catabolism ; Clustered with homologs of secretion proteins CvaA and CvaB. ; clustered with cvaA homolog ; clustered with tauABD ; clustered with tauACD ; clustered with tauABC ; This ORF and it's 5' neighbor are quite similar to the copS/copR copper-sensitive two-component signal transduction system from P. syringae. ; This ORF and it's 3' neighbor are quite similar to the copS/copR copper-sensitive two-component signal transduction system from P. syringae. ; Adjacent to probable ATP-binding subunit ; Fourth ORF of 4 gene cluster. ; Second ORF of 4 gene cluster. ; Third ORF of 4 gene cluster. ; Third ORF of a three subunit gene cluster. ; First ORF of 4 gene cluster. ; Second ORF of a three subunit gene cluster. ; Adjacent to transcriptional regulator PtxR. ; First ORF of a three subunit gene cluster. ; Third of 4 ORF gene cluster. ; Fourth of 4 ORF gene cluster. ; First of four ORF cluster. ; Second of four ORF cluster. ; Fourth of 4 ORF gene cluster ; Second of 4 ORF gene cluster. ; Third of 4 ORF gene cluster. ; First of 4 ORF gene cluster. ; Nearby probable polysaccharide synthesis/export cluster ; Adjacent to 4 ORF branched-chain keto acid dehydrogenase gene cluster. ; Adjacent to ORFs involved in polysaccharide export. ; Adjacent to three ORF cluster involved in polysaccharide synthesis ; Adjacent to ORFs involved in polysaccharide export ; Third of three ORF cluster ; Second of three ORF cluster. ; Adjacent to opdE ORF. ; First of a three ORF cluster. ; Adjacent to opdE gene ; Adjacent to probable transcriptional regulator oprR. ; Adjacent to b2246, probable transporter, as in coli. ; Adjacent to b2247 probable racemase, as in E. coli. ; Putative operon: hcnABC ; Putative operon: hcnABC ; Putative operon: hcnABC ; Near several other ORFs that are probably involved in glycogen synthesis. ; Adjacent to probable glycogen synthase ORF. ; Third of three ORF cluster ; Adjacent to ybdM ORF. ; First of three ORF cluster ; Adjacent to ybdN ORF. ; Adjacent gene is an aldehyde dehydrogenase, with homology to betaine dehydrogenase among others. ; First of a five ORF cluster. ; Second of five ORF cluster. ; Third of a five ORF cluster. ; Fourth of apparent five ORF cluster. ; Third of three ORF cluster. ; Fifth of five ORF cluster. ; First of three ORF cluster. ; Second of three ORF cluster. ; Out of expected context! ; Adjacent to copB/pcoB gene. ; Adjacent to copA/pcoA ; Adjacent genes encode probable permeases, periplasmic binding protein. ; Adjacent to genes probably encoding ATP-binding component, permease, and periplasmic binding protein of an ABC transport system ; Adjacent to genes probably encoding permeases and ATP-binding component of ABC transporter ; Adjacent to cynT & cynS ORFs, as in E. coli. ; Between cynR and cynS homologs, as in E. coli. ; Adjacent to cynT, as in E. coli. ; second gene of a 5-gene cluster ; Adjacent to a probable transmembrane sensor. ; third gene of a 5-gene cluster ; Fourth gene in a 6-gene cluster ; present with beta unit of this carboxylase in a probable 5-gene operon upstream ; First of four ORF cluster ; 6-gene cluster involving CoA-linked metabolism ; Second of four ORF cluster ; Fourth of four ORF cluster ; Third of four ORF cluster ; Several genes in region are homologous to other genes of the ato (short chain fatty acid uptake and utilization) operon of E. coli ; clustered with scoAB and atoE ; clustered with scoAB and atoB, acetyl-CoA acetyltransferase (same direction of transcription), adjacent to 3-hydroxybutyrate dehydrogenase and close to AtoC homolog (regulator of ato operon). ; pqqF is elsewhere. ; clustered with scoB ; clustered with scoA ; Fourth of five ORF cluster ; pqqF is elsewhere. ; Fifth of five ORF cluster ; pqqF is elsewhere. ; Third of five ORF cluster ; pqqF is elsewhere. ; First of five ORF cluster ; pqqF is elsewhere. ; Second of five ORF cluster ; Between exaA, the gene for quinoprotein ethanol dehydrogenase, and the pyrroloquinoline quinone biosynthetic gene cluster. ; Adjacent to gene for exaB, the associated cytochrome c550, and the pyrroloquinoline quinone biosynthetic gene cluster. ; Adjacent to probable response regulator. ; Adjacent to (truncated?) probable sensor kinase. ; Adjacent to probable sensor protein, as in P. denitrificans. ; Adjacent gene encodes a homolog to C-terminus of NadR ; Not in an operon with the five other PQQ biosynthetic genes. ; probable PAO1 operon (rbsB,A,C,R,K) ; Adjacent to pnuC homolog ; probable operon (rbsB,A,C,R,K) ; Probable operon (rbsB,A,C,R,K) ; Third of three ORF cluster, as in E. coli. ; Probable operon (rbsB,A,C,R,K) ; First of three ORF cluster. ; Second of three ORF cluster. ; Adjacent to cirA homolog ; upstream of ufrA, undefined ferric siderophore receptor ; Adjacent to putative sensor and ufrA (undefined ferric siderophore receptor) ; PhzFABCD (Pseudomonas aureofaciens) ; Next to FecI/R pair ; PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzABCDEFG (Pseudomonas fluorescens) PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; A possible type-I secretion system is nearby in one direction and the type-II secretion protein Xqha is nearby in the other direction. ; PA01 has modABC only. ; Immediately upstream of type II secretion system protein XqhA. ; modRABCD (Ecoli) ; modABCD (Azotobacter vinelandii) ; modABC (Ecoli) ; modABCD (Azotobacter vinelandii) ; modABC (Ecoli) ; modABCD (Azotobacter vinelandii) ; This and the adjacent gene are homologous to adjacent genes of unknown function in the denitrification gene cluster of Pseudomonas stutzeri. Many of the other genes in the cluster have homologs elsewhere in the P. aeruginosa genome. ; yejFEBA (Ecoli) ; yejFEBA (Ecoli) ; yejFEBA (Ecoli) ; yejFEBA (Ecoli) ; Near rnhA gene, as in E. coli. ; 1.6KB from the methionine synthase locus (metH). ; This and the adjacent gene are homologous to adjacent genes of unknown function in the denitrification gene cluster of Pseudomonas stutzeri. Many of the other genes in the cluster have homologs elsewhere in the P. aeruginosa genome. ; yejFEBA (Ecoli) ; b0436-b0441 (Ecoli) ; b0436-b0441= Similar organization as in E. coli. ; clpP-clpX (Ecoli) ; b0436-b0441 (Ecoli) ; b0436-b0441 (Ecoli) ; b0436-b0441 (Ecoli) ; clpP-clpX (Ecoli) ; b0436-b0441 (Ecoli) ; rstAB ; rstAB ; clustered with glutamine-tRNA ligase at 5' ; clustered with cysteine-tRNA ligase ; Adjacent to a peptidyl-prolyl isomerase, as in E. coli. ; close to several genes for components of nitrate reductase and nitrite reductase. No good homologs for K. pneumoniae nasD or nasE are in the region or elsewhere in the genome. ; close to several genes for components of nitrate reductase and nitrite reductase. ; Downstream gene is homologous to A. vinelandii NasT ; Upstream gene homologous to nasS of Azotobacter vinelandi ; Surrounded by genes involved in assimilation of nitrate and nitrate. ; Surrounding genes homologous to assimilatory nitrate and nitrate reductases and nitrate transport proteins from Klebsiella, others ; clustered with additional genes for assimilation of nitrate and nitrite ; clustered with additional genes for assimilation of nitrate and nitrite ; clustered with additional genes for assimilation of nitrate and nitrite ; Adjacent to genes for assimilatory nitrate and nitrite reductases and for nitrate transport, as in B. subtilis. Upstream of gene for OprF, as in Pseudomonas fluorescens. ; Same context in P. aeruginosa, P. fluorescens and P. syringae. ; Between two genes that are proposed to be cytoplasmic membrane associated. ; There is another AcoK homolog directly adjacent. ; Adjacent to cysB ; There is another AcoK homolog directly adjacent. ; Sixth of a cluster of hypothetical proteins most similar to ORFs from Synechocystis sp. and/or Mycobacteria. ; Fifth of a cluster of hypothetical proteins most similar to ORFs from Synechocystis sp. and/or Mycobacteria. ; Fourth of a cluster of hypothetical proteins most similar to ORFs from Synechocystis sp. and/or Mycobacteria. ; Third of a cluster of hypothetical proteins most similar to ORFs from Synechocystis sp. and/or Mycobacteria. ; Second of a cluster of hypothetical proteins most similar to ORFs from Synechocystis sp. and/or Mycobacteria. ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; First of a cluster of hypothetical proteins most similar to ORFs from Synechocystis sp. and/or Mycobacteria. ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; exsCBA (Pseudomonsa aeruginosa) ; exsCBA (Pseudomonsa aeruginosa) ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; exsD & pscB-L are an operon ; pcrGVH & popBD form an operon ; pcrGVH & popBD form an operon ; exsCBA (Pseudomonas aeruginosa) ; pcrGVH & popBD form an operon ; pcrGVH & popBD form an operon ; pcrGVH & popBD form an operon ; popN & pcr1-4DR form an operon ; popN & pcr1-4DR form an operon ; popN & pcr1-4DR form an operon ; popN & pcr1-4DR form an operon ; popN & pcr1-4DR form an operon ; yscN-U (Yersinia pseudotuberculosis) ; popN & pcr1-4DR form an operon ; popN & pcr1-4DR form an operon ; yscN-U (Yersinia pseudotuberculosis) ; pscNO (Pseudomonsa aeruginosa) ; yscN-U (Yersinia pseudotuberculosis) ; pscNO (Pseudomonsa aeruginosa) ; yscN-U (Yersinia pseudotuberculosis) ; yscN-U (Yersinia pseudotuberculosis) ; yscN-U (Yersinia pseudotuberculosis) ; yscN-U (Yersinia pseudotuberculosis ; yscN-U (Yersinia pseudotuberculosis) ; Adjacent gene encodes spermidine synthase, for which decarboxylated S-adenosyl methionine is a substrate. ; Adjacent gene has homology to probable protein phosphatases. ; Adjacent gene encodes probable serine/threonine kinase. ; similar context as paralogous ORF. ; Adjacent to a predicted lipoprotein ; Similar context as paralogous ORF. ; Same strand and just downstream of Kdp gene cluster. This context not conserved with E. coli. ; Fifth ORF of kdpABCDE gene cluster. ; Fourth ORF of kdpABCDE gene cluster. ; Third ORF of kdpABCDE gene cluster. ; Second ORF of kdpABCDE gene cluster. ; First ORF of kdpABCDE gene cluster. ; Second ORF of sucCD operon ; Just downstream of several TCA cycle components, a different context than E. coli. ; it is clustered with fabA. ; clustered with fabB ; 11 bp upstream of kdpABCDE gene cluster ; First ORF of sucCD operon. ; Fourth ORF of the sdhCDAB operon ; First ORF of sucAB operon ; Second ORF of sucAB operon ; Linked to but not part of sucAB operon. Between sucAB & sucCD loci, unlike E. coli. ; Third ORF of the sdhCDAB operon ; A similar gene (40%) is separated from this by one intervening gene. ; First ORF of sdhCDAB operon ; Second ORF of sdhCDAB operon ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; A similar gene (46%) is separated from this one by one intervening gene. ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; there is no fixH or fixQ homolog. The sequence fixNOP is repeated twice. ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; In Bradyrhizobium japonicum and Rhizobium meliloti, nitrogen fixation genes fixGHIS are downstream of fixNOPQ, which encodes the cbb3-type heme-copper oxidase complex. This region of the P. aeruginosa genome contains homologs of fixNOP and fixGIS ; Separated from the regulatory gene, anr, by one intervening gene. ; Separated by one gene from one of the genes it controls, hemN. ; Downstream gene encodes HemN, oxygen-independent coproporphyrinogen III dehyrogenase ; upstream gene encodes Anr, a regulator of hemN. ; Two downstream genes have homology to short-chain dehydrogenases and long-chain acyl-CoA dehydrogenases. ; This orf is downstream of apt (adenine phosphoribosyl transferase), anr (anaerobic transcriptional regulator), orf X (gene of unknown function), and hemN (anaerobic coproporphyrinogen III dehyrogenase). ; Adjacent genes are dnaX and recR, as for the E. coli homolog. The E. coli homolog is thought to be transcribed coordinately with recR. ; The upstream two genes, encoding DNA polymerase III gamma and tau subunits (dnaX) and a hypothetical protein, are conserved in E. coli and P. aeruginosa. ; As in E. coli, upstream gene is zipA. ; As in E. coli, the downstream gene encodes DNA ligase. ; Neighboring genes are homologous to xanthine dehydrogenases. No genes in vicinity have clear role in alkane degradation. ; Separated from xanthine dehydrogenase by one intervening gene. ; The adjacent gene is similar to ureidoglycollate hydrolase (DAL3) [Saccharomyces cerevisiae], which is separated from the S. cerevisiae allantoicase gene (DAL2) by only 2 genes. ; in S. cerevisiae, the allantoicase gene (DAL2) and ureidoglycollate hydrolase (DAL3) are in the same cluster (DAL), separated by two genes. ; The adjacent gene encodes a probable allantoicase ; In E. coli, molybdopterin co-factor genes moaABCDE are clustered. In P. aeruginosa, homologs of moaBCDE are clustered, separate from the two moaA homologs. A second moaB homolog also exists. ; First gene of a three gene cluster conserved with E. coli. ; As in E. coli, this is the gene immediately downstream of the gene for glyoxylate carboligase. The gene downstream of this one is also conserved between E. coli and P. aeruginosa. ; The third in a three-gene cluster conserved with E. coli. ; Adjacent gene encodes type I pyruvate kinase ; Not associated with genes of an ABC transporter. This is the case in E. coli also, where the thiosulfate-binding protein and the membrane-associated components of the sulfate-thiosulfate transporter are encoded by genes not linked to the gene for the periplasmic sulfate-binding protein. ; ccmA-C,E-H (Ecoli) ; ccmA-C,E-H (Ecoli) ; ccmA-C,E-H (Ecoli) ; ccmA-C,E-H (Ecoli) ; ccmA-C,E-H (Ecoli) ; ccmA-C,E-H (Ecoli) ; ccmA-C,E-H (Ecoli) ; motAB (B. subtilus) ; ccmA-C,E-H (Ecoli) ; cheYZAB (Ecoli) ; cheYZAB (Ecoli) ; motAB (B.subtilus) ; cheYZAB (Ecoli) ; cheYZAB (Ecoli) ; The adjacent gene is similar (57%), including the serine- and glycine-rich tail. ; The adjacent gene is 57% similar, including the extremely glycine- and serine-rich tail. ; fliMNOPQR (Ecoli) ; fliMNOPQR (Ecoli) ; fliMNOPQR (Ecoli) ; fliMNOPQR (Ecoli) ; fliMNOPQR (Ecoli) ; fliMNOPQR (Ecoli) ; Adjacent gene is probable sensor. ; Adjacent gene is lasR ; Between lasI and lasR genes. ; Adjacent gene is lasI ; Not associated with other potential components of an ABC transport system. ; The adjacent gene encodes a methyl-accepting chemotaxis protein ; In E. coli, ilvB, the gene encoding the large subunit of acetolactate synthase, is in an operon with ilvN, encoding the small subunit. This is not the case for P. aeruginosa. ; The adjacent gene is a probable sensor for a two-component regulatory system. ; it contains a good homolog of CysD and a gene that appears to contain domains homologous to CysN and CysC. This CysC homolog is not in the context of related genes, and may have a different function. ; In E. coli, the sulfate activation locus is cysDNC. In P. aeruginosa, a previously described locus elsewhere in the genome has been characterized as involved in sulfur metabolism ; Other genes in the vicinity encode GalE, putative glycosyl transferases, and an apparent ATPase component of an ABC transporter. Other genes in the region have low homology to putative glycosyl transferases. This may be a locus for synthesis and transport of a polysaccharide. ; Other genes in the vicinity encode GalE, putative glycosyl transferases, and an apparent ATPase component of an ABC transporter. Other genes in the region have low homology to putative glycosyl transferases. This may be a locus for synthesis and transport of a polysaccharide. ; Other genes in the vicinity encode GalE, putative glycosyl transferases, and an apparent ATPase component of an ABC transporter. Other genes in the region have low homology to putative glycosyl transferases. This may be a locus for synthesis and transport of a polysaccharide. ; downstream genes have very poor homology to glycosyl transferases. This might be a locus involved in synthesis and transport of a polysaccharide. However, there is no gene likely to encode a permease. ; This orf is homologous to ATPases in putative ABC transporters consisting of ATPase and permease subunits only, in gene clusters involved in synthesis of O antigens in lipopolysaccharide synthesis. Upstream genes encode GalE and a glycosyl transferase ; The upstream gene is galE, the downstream gene encodes an apparent ATPase component of an ABC transporter. Other genes in the region have low homology to putative glycosyl transferases. This may be a locus for synthesis and transport of a polysaccharide. ; Adjacent genes encode a probable glycosyl transferase and an apparent ATPase component of an ABC transporter. Other genes in the region have low homology to putative glycosyl transferases. This may be a locus for synthesis and transport of a polysaccharide. ; Not associated with other genes of Type II secretion pathway. ; Not part of aceABK operon as in E. coli. ; Not associated with other B6 synthetic genes. Adjacent gene encodes ISOCITRATE DEHYDROGENASE KINASE/PHOSPHATASE. ; 46% similar to FecR, periplasmic regulator for fec (ferric dicitrate transport) operon [Escherichia coli]. ; Adjacent gene is homologous to aerobactin receptors. ; The adjacent gene is homologous to pupR gene product, involved in regulation of outer membrane ferric siderophore receptor PupB [Pseudomonas putida] ; Cluster of genes likely to make up ABC transporter, adjacent to genes for gammaglutamyl transpeptidase and glutaminase-asparaginase ; The upstream gene is homologous to the adjacent Streptomyces coelicolor gene (SC6G4.34), and to the Rhizobium meliloti gene upstream from orfY (orfX, downstream of DnaK). ; Cluster of genes likely to make up ABC transporter, adjacent to genes for gammaglutamyl transpeptidase and glutaminase-asparaginase ; Cluster of genes likely to make up ABC transporter, adjacent to genes for gammaglutamyl transpeptidase and glutaminase-asparaginase ; It may form a operon with dctD. ; Cluster of genes likely to make up ABC transporter, adjacent to genes for gammaglutamyl transpeptidase and glutaminase-asparaginase ; cyoA-E (Ecoli) ; It may form a operon with adjacent gene dctB. ; cyoA-E (Ecoli) ; cyoA-E (Ecoli) ; cyoA-E (Ecoli) ; cyoA-E (Ecoli) ; A similar (42%) orf is separated from this by two intervening orfs, one of which probably encodes a transcriptional regulator. ; The adjacent gene encodes a putative transmembrane protein with homology to numerous putative drug export proteins. ; no emrA homolog is adjacent to this orf. ; no ABC transporter is identified. ; The E. coli emrB gene is in an operon with emrA ; The adjacent gene has the sequence previously reported for 2-aminoethylphosphonate:pyruvate aminotransferase [Pseudomonas aeruginosa] and is homologous to phnW [Salmonella typhimurium]. In S. typhimurium, phnX and phnW are preceded by a GntR-type regulator, the PHO regulon activator protein PhoB, and an ABC transporter. The P. aeruginosa genes are adjacent to a presumed LysR-type regulator ; no ABC transporter is identified. ; The adjacent gene has the sequence previously reported for phosphonoacetaldehyde hydrolase [Pseudomonas aeruginosa] and is homologous to PhnX [Salmonella typhimurium]. In S. typhimurium, phnX and phnW are preceded by a GntR-type regulator, the PHO regulon activator protein PhoB, and an ABC transporter. The P. aeruginosa genes are adjacent to a presumed LysR-type regulator ; Adjacent gene is also probably a peptidase, with homology to signal peptidase I. ; Not in the context of genes homologous to czcR, C, B, or A of A. eutrophus or to zntR of S. aureus. ; This orf may be the regulator for a probable efflux pump encoded by the adjacent gene on the opposite strand. ; both qacA and qacB genes have putative regulatory genes on the opposite strand. ; Adjacent gene on the opposite strand encodes a putative transcriptional regulator ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Adjacent to a cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Flanking genes are homologs of cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Cluster of genes with homology to cobalamin biosynthetic genes of Pseudomonas denitrificans and/or Salmonella typhimurium ; Adjacent to cluster of genes with homology to cobalamin biosynthetic genes. ; Adjacent gene is similar to HcnB [Pseudomonas fluorescens] and to other oxidoreductases. ; the intervening sequence has some similarity to HcnA but with no clear start site. ; Adjacent gene has some similarity to HcnC ; Second ORF upstream of a cluster of three probable amino acid/opine ABC transporter genes. ; Adjacent to genes probably encoding permease and ATP-binding components of an ABC transport system ; Adjacent to genes likely to encode permease proteins. ; Adjacent to probable ATP-binding component of ABC transport system ; Cluster of genes including P.aeruginosa genes aprD, aprE, aprF, aprA, aprI for alkaline protease secretion apparatus, alkaline protease, inhibitor ; Cluster of genes including P.aeruginosa genes aprD, aprE, aprF, aprA, aprI for alkaline protease secretion apparatus, alkaline protease, inhibitor ; Cluster of genes including P.aeruginosa genes aprD, aprE, aprF, aprA, aprI for alkaline protease secretion apparatus, alkaline protease, inhibitor ; Cluster of genes including P.aeruginosa genes aprD, aprE, aprF, aprA, aprI for alkaline protease secretion apparatus, alkaline protease, inhibitor ; Cluster of genes including P.aeruginosa genes aprD, aprE, aprF, aprA, aprI for alkaline protease secretion apparatus, alkaline protease, inhibitor ; Adjacent genes enocode an ABC transport system that exports the alkaline protease, and the structural gene aprA encoding the protease itself. ; The two downstream genes encode homologs of EmrA and EmrB, a multidrug resistance system in Escherichia coli ; the upstream gene encodes a homolog of OprN and other outer membrane components of multidrug efflux systems in Pseudomonas aeruginosa. ; The downstream gene encodes a homolog of EmrB ; The upstream gene is homologous to PmrA and EmrA. ; Adjacent to a gene on the opposite strand also encoding a putative oxidoreductase (50% similar to this orf) ; Adjacent gene encodes an acyl-CoA dehydrogenase ; Adjacent gene probably encodes an alpha-methylacyl-CoA racemase ; Adjoining gene encodes strong homolog of PhoQ ; Adjoining gene is homologous to phoQ. ; NapEFDABC cluster similar in gene organization to periplasmic nitrate-reducing system of Rhodobacter sphaeroides ; Second of six ORF cluster: napEFDABC. ; Third of six ORF cluster: napEFDABC. ; Fourth of six ORF cluster: napEFDABC. ; Fifth of six ORF cluster: napEFDABC. ; Sixth of six ORF cluster: napEFDABC. ; Upstream gene is homolog of OmpC and RstA and is presumed transcriptional regulator controlled by this sensor. ; A homolog of EnvZ and RstB is encoded by the adjacent gene. ; Adjacent gene (nrdB) encodes small chain ; Adjacent gene probably encodes large chain of ribonucleotide reductase ; Adjacent gene is pyocin S2 (killer protein) ; Adjacent gene encodes immunity protein of pyocin S2 ; No other genes with putative lipopolysaccharide biosynthetic function in vicinity. ; Not in association with other genes likely to make up typical procaryotic ABC transport system. ; Adjacent to other genes involved in flagellar biosynthesis. ; fliFGHI (Ecoli) ; fliFGHI (Ecoli) ; fliFGHI (Ecoli) ; fliFGHI (Ecoli) ; fleSR (Pseudomonas aeruginosa) ; fliEFG (P. aeruginosa) ; fleSR (Pseudomonas aeruginosa) ; fleQSR (Pseudomonas aeruginosa) ; fliABCDST (Ecoli & Salmonella typhimurium) ; fliCGDS (P. aeruginosa strain DG1) fliABCDST (Ecoli & Salmonella typhimurium) ; fliC-fliD (Ecoli) ; fliC-fliD (Ecoli) ; fliC-fliD (Ecoli) ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Upstream of FliC and FlaG homologs, as in the Riftia pachyptila endosymbiont. ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Adjacent to genes BraD, BraE, BraF, and BraG, reported to constitute a transport system for branched-chain amino acids ; Cluster of flagellar biosynthetic genes from flgB through flgL ; Adjacent to genes BraC, BraE, BraF, and BraG, reported to constitute a transport system for branched-chain amino acids ; Adjacent to genes BraC, BraD, BraF, and BraG, reported to constitute a transport system for branched-chain amino acids ; Adjacent to genes BraC, BraD, BraE, and BraG, reported to constitute a transport system for branched-chain amino acids ; Adjacent to genes BraC, BraD, BraE, and BraF, reported to constitute a transport system for branched-chain amino acids ; Upstream protein is probable transcriptional regulator ; This is in a cluster of genes homologous to the phaABCDEFG locus of Rhizobium meliloti. ; This is in a cluster of genes homologous to the phaABCDEFG locus of Rhizobium meliloti. ; This is in a cluster of genes homologous to the phaABCDEFG locus of Rhizobium meliloti. ; This is in a cluster of genes homologous to the phaABCDEFG locus of Rhizobium meliloti. ; This is in a cluster of genes homologous to the phaABCDEFG locus of Rhizobium meliloti. ; Adjacent to probable aldehyde dehydrogenase and probable porin. ; In E. coli, pdxH is cotranscribed with tyrS. In P. aeruginosa the two genes are far apart. ; Adjacent to probable aldehyde dehydrogenase and probable oxidoreductase. ; In cluster with genes for several other enzymes probably involved in carbon compound catabolism ; 2 adjacent genes with strong homology to two adjacent genes in Pseudomonas mendocina. ; in Escherichia coli, bcp is downstream from gcvR (glycine cleavage repressor protein) ; Downstream gene is bcp (bacterioferritin comigratory protein) ; The nadB gene is elsewhere in the genome (in E. coli, nadA and nadB are adjoining genes). ; phnA just upstream. PhnB and A known to be cotranscribed. ; PhnB is downstream and has been reported to be cotranscribed. ; Adjacent to proteins probably encoding fimbrial chaperone protein and fimbrial subunit protein ; Between genes probably encoding fimbrial usher protein and for fimbrial subunit ; Adjacent to genes probably encoding fimbrial usher and chaperone proteins ; Adjacent to orf with 42% similarity to ExsD protein ; There is a colicin-like gene adjacent. ; Adjacent to gene identified as oprL, pal (peptidoglycan-associated lipoprotein) ; b0739-b0741 (Ecoli) ; tolQRAB (Pseudomonas aeruginosa) ; TolQRAB (Pseudomonas aeruginosa) ; tolQRAB (Pseudomonas aeruginosa) ; tolQRAB (Pseudomonas aeruginosa) ; operon:orf26, ruvCAB ; operon:orf26, ruvCAB ; operon:orf26, ruvCAB ; Adjacent to gene with homology to cold shock protein (CspA) family ; PurM and PurN are encoded by adjacent genes, as in E. coli. ; PurM and PurN are encoded by adjacent genes, as in E. coli. ; pirRSA (Pseudomonas aeruginosa) ; pirRSA (Pseudomonas aeruginosa) ; pirRSA (Pseudomonas aeruginosa) ; Adjacent orfs have no homology to any sequences in databases. ; Adjacent to arginine-ornithine catabolic locus ; The lysC locus coding for aspartokinase consists of two in-frame overlapping genes. In two Corynebacterium spp. and in M. smegmatis, the aspartokinase gene is followed by the gene for aspartate-semialdehyde dehydrogenase. This is not the case in P. aeruginosa ; Arginine-ornithine catabolic locus, adjacent to arginine-ornithine transport locus ; In arginine-ornithine catabolic locus ; Arginine-ornithine catabolic locus, adjacent to arginine-ornithine transport locus ; Arginine/ornithine catabolic locus, adjacent to arginine/ornithine transport locus ; Arginine-ornithine catabolic locus, adjacent to arginine-ornithine transport locus ; Cluster of arginine/ornithine catabolic genes, adjacent to arginine/ornithine uptake operon ; Within arginine-ornithine uptake locus, adjacent to arginine-ornithine catabolic locus. ; Arginine/ornithine transport locus, adjacent to arginine/ornithine catabolic locus ; Arginine-ornithine transport locus, adjacent to arginine-ornithine catabolic locus ; Arginine-ornithine transport locus, adjacent to arginine-ornithine catabolic locus ; Arginine-ornithine transport locus, adjacent to arginine-ornithine catabolic locus ; Adjacent to homologs for DctQ and DctP ; Adjacent to homologs for DctQ and DctP ; Adjacent to homologs for dctM and dctQ, genes for the membrane components for the C4-dicarboxylate transport system in [Rhodobacter capsulatus] ; Not in association with genes for other components of citryl-CoA ligase. Adjacent to genes probably encoding C4-dicarboxylate transport system. ; No homology to sucA in adjacent orfs. Genes immediately upstream encode enzymes probably involved in carbon compound degradation. ; No similarity to fusA or fusE is found in this orf or in adjoining regions of the genome. ; 4-gene phenylalanine hydroxylase gene cluster ; and in the flanking upstream region, a divergently transcribed gene (phhR) encoding an activator protein. ; The second gene of a 4-gene cluster encoding phenylalanine hydroxylase (PhhA), carbinolamine dehydratase (PhhB), and aromatic aminotransferase (PhhC) ; and in the flanking upstream region, a divergently transcribed gene (phhR) encoding an activator protein. ; The third gene of a 4-gene cluster encoding phenylalanine hydroxylase (PhhA), carbinolamine dehydratase (PhhB), and aromatic aminotransferase (PhhC) ; Neither the P. putida context nor the E. coli context is seen in P. aeruginosa ; Separted by three intervening genes from the Phh locus, also involved in aromatic amino acid metabolism. ; Region contains several other genes involved in aromatic amino acid metabolism: adjacent gene is aroP (general aromatic amino acid transport), which is separated by three intervening genes from the phh locus (phenylalanine hydroxylase). ; Adjacent to putative ATP-binding component of an ABC transporter. ; In E. coli, cysZ is adjacent to cysK and close to other genes involved in cysteine biosynthesis. This is not the case in P. aeruginosa. ; No other genes for amino acid metabolism in region. ; Adjacent to pta gene, like ackA gene in E. coli ; The gene for the hemolytic phospholipase C, plcH, is adjacent. ; Genes for the accessory proteins (plcR1 and plcR2) are adjacent. ; Upstream gene is similar to brg1 [Bordetella pertussis] ; Adjacent to probable ackA gene ; like E. coli ; Adjacent to prpCD ; Adjacent gene in P. aeruginosa is homologous to the B. pertussis gene upsteam of brg1. ; Adjacent to other ORFs involved in propionate catabolism. ; Adjacent to ORFs involved in propionate catabolism. ; Adjacent to putA (proline dehydrogenase). ; Adjacent to other ORFs involved in propionate catabolism, as in S. typhimurium ; Adjacent to PutP (proline permease) ; Adjacent gene is similar to YecP, another hypothetical protein in the aspS-bisZ intergenic region. Haemophilus influenzae has homologs of both yecO and yecP, but in different parts of the genome. ; Adjacent gene is similar to yecO, another hypothetical protein is aspS-bisZ intergenic region [Escherichia coli]. Haemophilus influenzae has homologs of both yecO and yecP, but in different parts of the genome. ; The gene sequence lepA-lepB-rnc-era-recO-pdxJ is found in both E. coli and P. aeruginosa. In E.coli, pdxJ is in an operon with dpj, an essential gene. No dpj homolog was found in the P. aeruginosa genome. ; The gene sequence lepA-lepB-rnc-era-recO-pdxJ is found in both E. coli and P. aeruginosa. ; The gene sequence lepA-lepB-rnc-era-recO-pdxJ is found in both E. coli and P. aeruginosa. ; The gene sequence lepA-lep-rnc-era-recO-pdxJ is found in both E. coli and P. aeruginosa. ; Adjacent to gene for LepA: in E. coli, LepA is a GTP-binding protein whose gene is cotranscribed with lepB. The gene sequence lepA-lepB-rnc-era-recO-pdxJ is found in both E. coli and P. aeruginosa. ; Cotranscribed with lepB. The gene sequence lepA-lepB-rnc-era-recO-pdxJ is found in both E. coli and P. aeruginosa. ; Cluster of genes related to regulation of mucoid phenotype: algUmucA-D (PA01). ; Cluster of genes related to regulation of mucoid phenotype: algUmucA-D (PA01). ; Cluster of genes related to regulation of mucoid phenotype: algUmucA-D (PA01). ; Cluster of genes involved in regulation of mucoid phenotype: algUmucA-D (PA01) . ; Cluster of genes involved in regulation of mucoid phenotype. ; Upstream gene is good candidate for regulator ; Downstream gene is good candidate for sensor protein ; In a cluster of genes that appear similar to pathways involved in degradation of carbon compounds, including genes for beta-oxidation. ; Adjacent to gene similar to mmsA (methylmalonate semialdehyde dehydrogenase), separated from gene similar to mmsB by three intervening genes. These are in a cluster of genes that appear similar to pathways involved in degradation of carbon compounds, including genes for beta-oxidation. ; The two downstream genes encode a probable acyl-CoA dehydrogenase and a probable enoyl-CoA hydratase. ; In cluster of genes that appears similar to pathways involved in degradation of carbon compounds, including genes for beta-oxidation. ; Homologs of mmsA and mmsR are separated from this gene by three intervening genes. ; Upstream and downstream genes also similar to region implicated in degradation of sodium dodecyl sulfate [Pseudomonas sp.] ; Downstream genes similar to sdsB and sdsA (sodium dodecyl sulfate degradation [Pseudomonas sp.] ; Adjacent to cluster of genes from bacteriophage Pf1. ; Cluster of genes from bacteriophage Pf1 ; Cluster of genes from bacteriophage Pf1 ; cluster of genes from bacteriophage Pf1 ; Cluster of genes from bacteriophage Pf1 ; Cluster of genes from bacteriophage Pf1 ; cluster of genes from bacteriophage Pf1 ; Cluster of genes from Pf1 ; cluster of genes from bacteriophage Pf1 ; Cluster of genes from bacteriophage Pf1 ; Cluster of genes from bacteriophage Pf1 ; cluster of genes from bacteriophage Pf1 ; Downstream of this orf is an integrated copy of the bacteriophage Pf1 genome. ; Adjacent to homologs of ExbB and ExbD. ; Adjacent to a TonB homolog and to a gene with homology to TolQ and ExbB ; Downstream genes are homologs of exbD and tonB. ; The gene previously reported to be PhoA is immediately upstream. ; One paralog (77% similar) is immediately downstream. ; 8th of a cluster of 8 genes, 5 of which have similarity (46-70%) to xcp genes. ; 7th in a cluster of 8 genes, 5 of which have similarity (46-70%) to xcp genes. ; 6th of a cluster of 8 genes, 5 of which have similarity (46-70%) to xcp genes ; Second of a cluster of eight genes with similarity (46-70%)to xcp genes ; First of a cluster of eight genes, five of which have similarity(46%-70%)to xcp genes ; 5th of five genes in cluster (pigA-E) ; 3rd of five genes in cluster (pigA-E) ; 2nd of five genes in cluster (pigA-E) ; 1st of five genes in cluster (pigA-E) ; Adjacent to an rRNA cluster. ; This ORF lies near an ABC polyamine transport system. ; trpG, reported to encode component II of this enzyme, is in a different part of the genome. ; A probable two-component system sensor protein is located just upstream. ; A probable two-component system regulator protein is located just downstream. ; 1 of a cluster of 6 genes conserved with E. coli. ; 1 of a cluster of 6 genes conserved with E. coli. ; 1 of a cluster of 6 genes conserved with E. coli. ; 1 of a cluster of 6 genes conserved with E. coli. ; 1 of a cluster of 6 genes conserved with E. coli. ; 1 of a cluster of 6 genes conserved with E. coli. ; Organization NOT conserved with E. coli! ; Upstream of rpsU, as in E. coli. ; There are other folate biosynthesis proteins in this region. ; Part of macromolecular synthesis (MMS) operon ; Part of macromolecular synthesis (MMS) operon ; Adjacent to epd ORF, as in E. coli ; Part of macromolecular synthesis (MMS) operon ; nirSQ-norCB region ; Adjacent to pgk ORF, as in E. coli ; Downstream of norCB ; norCB gene cluster ; norCB gene cluster ; nirQOP ; Downstream of nirQ ; Upstream and divergently transcribed from nirS ; nirSMCFDLGHJEN gene cluster ; nirSMCFDLGHJEN gene cluster ; nirSMCFDLGHJEN ; nirSMCFDLGHJEN ; nirSMCFDLGHJEN gene cluster ; nirSMCFDLGHJEN gene cluster ; nirSMCFDLGHJEN gene cluster ; nirSMCFDLGHJEN gene cluster ; bioBFHCD gene cluster ; bioBFHCD gene cluster ; bioBFHCD gene cluster ; nirSMCFDLGHJEN gene cluster ; nirSMCFDLGHJEN gene cluster ; nirSMCFDLGHJEN gene cluster ; Located in a cluster with the bioBFHCD genes. ; Upstream of the bioFHCD genes ; upstream of a homolog of accA ; Unlike E. coli, not downstream of glcCDEFG ORFs. ; FiuIRA (Pseudomonas aeruginosa) ; fiuIRA (Pseudomonas aeruginosa) ; fiuIRA (Pseudomonas aeruginosa) ; creBCD (Ecoli) ; creBCD (Ecoli) ; creBCD (Ecoli) ; Adjacent to probable permease ; Adjacent to glucose dehydrogenase ; Adjacent to ORF resembling glutamine synthase, as in E. coli. ; Adjacent to probable transporter, as in E. coli. ; AldG, containing a [2Fe-2S] cluster. A three-gene cluster in P. aeruginosa contains homologs of each of these. ; AldH, containing heme B and molybdopterin cofactors ; The aldehyde dehydrogenase complex of Acetobacter polyoxogenes, which catalyzes the oxidation of acetaldehyde to acetic acid, has three subunits: AldF, a cytochrome c ; AldG, containing a [2Fe-2S] cluster. A three-gene cluster in P. aeruginosa contains homologs of each of these. ; AldH, containing heme B and molybdopterin cofactors ; The aldehyde dehydrogenase complex of Acetobacter polyoxogenes, which catalyzes the oxidation of acetaldehyde to acetic acid, has three subunits: AldF, a cytochrome c ; Adjacent to acetylpolyamine aminohydrolase. ; Downstream gene encodes probable PERIPLASMIC SPERMIDINE/PUTRESCINE-BINDING PROTEIN ; Adjacent to a gene on the opposite strand also encoding a putative oxidoreductase (50% similar to this orf) ; No other genes in vicinity are likely to be involved in amino acid synthesis ; The adjacent gene also encodes a probable lipoprotein, with 60% similarity to this one. ; chpABCDE gene cluster ; chpABCDE gene cluster ; pilGHIJKL gene cluster ; Part of the pilGHIJKL gene cluster ; Part of the pilGHIJKL gene cluster ; Part of the pilGHIJKL gene cluster ; Part of the pilGHIJKL gene cluster ; Part of the pilGHIJKL gene cluster ; This probable permease is located in a cluster of gene coding for enzymes in the dihydropyrimidine reductive catabolic pathway. ; Homologs of all three enzymes from the dihydropyrimidine reductive catabolic pathway and a probable allantoin/uracil permease are located in a cluster at this locus. ; With the adjacent gene, may encode a two-component oxidoreductase. ; With the adjacent gene, may encode a two-component oxidoreductase. ; Part of conserved codBA operon. ; Part of conserved codBA operon. ; Part of the mexAB-oprM operon. ; Part of the mexAB-oprM operon. ; Part of the mexAB-oprM operon. ; chpABCDE gene cluster ; chpABCDE gene cluster ; chpABCDE gene cluster ; Upstream of pyrBC genes ; Not in the context of homologs of czcABC, RS as in R. eutropha ; Downstream of pyrB and pyrR ; Downstream of pilT ; Upstream of pilT ; Upstream of the pilU gene. ; Downstream of proC ; ftsYEX (Ecoli) ; ftsYEX (Ecoli) ; ftsYEX (Escherichia coli) ; Upstream of the homolog for the adjacent gene (Y4WB) in Rhizobium sp. ; 3 ORFs 5' of ftsY ; Downstream of the homolog for the adjacent gene (Y4WA) in Rhizobium sp. ; Conserved position next to thyA gene. ; Not in operon with waaA (kdtA) as in E. coli. ; clustered with potF2F3HI ; clustered with potF2F3GI ; clustered with potF2F3GH ; clustered with potF2GHI ; clustered with potF3GHI ; Flanked by two ycjK homologs (homologous to B. subtilis glutamine synthase) ; Adjacent to gabT ORF ; Adjacent to gabD ORF ; cysTWA (Ecoli) ; cysTWA (Ecoli) ; Cluster of genes probably involved in carbon compound degradation ; 1 of 4 contiguous ORFs that look like a polyamine ABC-type transporter. ; Organization of pca genes appears to be somewhat different than in P. putida. ; Cluster of genes in protocatechuate degradative pathway. Another cluster is about 100 kb away. ; 1 of 4 contiguous ORFs that look like a polyamine ABC-type transporter. ; Adjacent to pntA homolog, as in E. coli ; Adjacent to homologs of ExbB and ExbD. ; 1 of 4 contiguous ORFs that look like a ABC-type polyamine transporter. ; 1 of 4 contiguous ORFs that look like a polyamine ABC-type transporter. ; adjacent to pntB, as in E. coli. ; chemotaxis operon ; Adjacent to sulfate ester transporter ; chemotaxis operon ; chemotaxis operon ; Not in phosphonate utilization operon, which is elsewhere. ; chemotaxis operon ; chemotaxis operon ; chemotaxis operon ; chemotaxis operon ; chemotaxis operon ; 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri ; Flanked by genes homologous to a 4-gene cluster in Edwardsiella ictaluri ; 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri ; 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri ; 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri ; similar context as the paralog. ; Adjacent to a predicted lipoprotein ; PpkA kinase directly downstream. ; Probable phosphatase directly upstream. ; trpABI (Pseudomonas aeruginosa) ; trpABI (Pseudomonas aeruginosa) ; trpABI (Pseudomonas aeruginosa) ; b3287-b3290 (Ecoli) ; b3287-b3290 (Ecoli) ; b3287-b3290 (Ecoli) ; glyQS (Ecoli) ; glyQS (Ecoli) ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; Genomic_Context ; Cluster of genes probably involved in carbon compound catabolism ; clustered with other three ORFs downstream ; clustered with potBCD ; clustered with potACD ; clustered with potABD ; clustered with potABC ; clustered with recA ; clustered with recX ; Adjacent to recA, as in E. coli. ; Adjacent to rpoS, as for nlpD [Escherichia coli] ; It might be clustered with three or four genes upstream. ; Adjacent to yedF homolog. ; Adjacent to yedE homolog. ; Adjacent to ygbQ homolog, as in E. coli. ; Adjacent to ygbP homolog, as in E. coli. ; Adjacent and apparentlly linked to upstream pyrG. Adjacent to eno. ; May be of interest ; in E. coli, pyrG & eno are adjacent- in PAO, kdsA is between them in a potential operon. ; lpxD-fabZ-lpxA-lpxB conserved in both E. coli, P. aeruginosa ; lpxD-fabZ-lpxA-lpxB conserved in both E. coli, P. aeruginosa ; lpxD-fabZ-lpxA-lpxB conserved in both E. coli, P. aeruginosa ; lpxD-fabZ-lpxA-lpxB conserved in both E. coli, P. aeruginosa ; Separated by one gene (cdsA) from dxr, involved in synthesis of isopentenyl diphosphate, a precursor of undecaprenol phosphate. ; Between map and tsf, as in E. coli. Part of a large, highly-conserved region. ; form an operon with prfB ; form an operon with lysS ; clustered with yjfI homolog ; clustered with yjfJ homolog ; clustered with hom gene ; clustered with thrC ; Clustered with rpsP, rimM and trmD, as in E. coli. ; Clustered with rpsP, rimM and rplS, as in E. coli. ; Clustered with rpsP, trmD and rplS, as in E. coli. ; Clustered with rimM, trmD and rplS, as in E. coli. ; Adjacent to a probable aminotransferase ; clustered with another putative PTS protein and two genes with similarity to N-acetylglucosamine-metabolizing enzymes (nagS, nagA) ; clustered with another putative PTS protein and two genes with similarity to N-acetylglucosamine-metabolizing enzymes (nagS, nagA) ; Not associated with homologs of P. syringae copRS or copBCD. ; Part of conserved guaBA operon. ; Part of conserved guaBA operon. ; Adjacent to yfgL homolog, as in E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Between YfgM & YfgK, as in E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; Two-gene sequence (at least) conserved with H. influenzae ; part of 15kb region well-conserved between PAO & E. coli, but this is an outlier. ; This and downstream gene are homologous to two adjacent genes of H. influenzae ; part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; Clustered with IscSUA hscB and fdx as in Azotobacter and E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Clustered with IscSUA hscA and fdx as in Azotobacter and E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Clustered with iscSU, hscAB and fdx as in Azotobacter and E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Clustered with iscSA, hscAB and fdx as in Azotobacter and E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Clustered with iscUA, hscAB and fdx as in Azotobacter and E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Gene cluster conserved in Azotobacter, Haemophilus and E. coli. Part of 15kb region well-conserved between PAO & E. coli. ; Identical to Azotobacter context, but while flanking ORFs are part of 15kb region well-conserved between PAO & E. coli, this is an outlier. ; Part of 15kb region well-conserved between PAO & E. coli. ; Part of 15kb region well-conserved between PAO & E. coli. ; clustered with secD ; clustered with secF downstream ; clustered with queA upstream ; clustered with a gene downstream coding for Tgt protein ; Adjacent to a yjgP homolog and near pepA, as in E. coli. ; Adjacent to a yjgQ homolog and near pepA, as in E. coli. ; Between valS & pepA genes, as in E. coli. ; Upstream of gene encoding exoenzyme S. ; Adjacent genes are ORF1 and exoS. ORF2 overlaps with ORF3. ; No other components of an ABC transporter in the vicinity. ; A nearby downstream gene is similar to periplasmic binding proteins in transporters for basic amino acids. ; A nearby gene downstream has low-level similarity to ornithine cyclodeaminase ; In-house transposon mutant sequence data indicates this ORF is adjacent to a region of sequence divergence between PA01 and PAK. A probable DNA recombinase gene is nearby. ; In E. coli, molybdopterin co-factor genes moaABCDE are clustered. In P. aeruginosa, homologs of moaBCDE are clustered, separate from the two moaA homologs. A second moaB homolog also exists. ; It is clustered with narK1K2GHJ. ; clustered with narK1K2GHI. ; clustered with narK1K2GJI ; clustered with narK1K2HIJ ; clustered with narK1GHIJ ; clustered with narK2GHIJ ; It is clustered with narL to form a two-component system. ; It is clustered with narX. ; It is clustered with proV, W and X homologs. ; It is clustered with ProV, W and Z homologs. ; It is clustered with B. subtilis proV, X and Z homologs. ; It is clustered with B. subtilis proW, X, and Z homologs. ; It forms a cluster with pupI and pupR gene homologs. ; First ORF of 5 ORF cluster without similarity to anything. ; Second ORF of 5 ORF cluster without similarity to anything. ; Third ORF of 5 ORF cluster without similarity to anything. ; Fourth ORF of 5 ORF cluster without similarity to anything. ; Fifth ORF of 5 ORF cluster without similarity to anything. ; clustered with four other molybdenum cofactor biosynthesis gene homologs, but separate from a locus of three molybdenum cofactor biosynthesis genes including another moeA paralog. ; in a cluster of moaCDEB and moeA. In E. coli, molybdopterin co-factor genes moaABCDE are clustered. In P. aeruginosa, homologs of moaBCDE are clustered, separate from the two moaA homologs. A second moaB homolog also exists. ; in a cluster of moaCDEB and moeA. In E. coli, molybdopterin co-factor genes moaABCDE are clustered. In P. aeruginosa, homologs of moaBCDE are clustered, separate from the two moaA homologs. A second moaB homolog also exists. ; in a cluster of moaCDEB and moeA. In E. coli, molybdopterin co-factor genes moaABCDE are clustered. In P. aeruginosa, homologs of moaBCDE are clustered, separate from the two moaA homologs. A second moaB homolog also exists. ; in a cluster of moaCDEB and moeA. In E. coli, molybdopterin co-factor genes moaABCDE are clustered. In P. aeruginosa, homologs of moaBCDE are clustered, separate from the two moaA homologs. A second moaB homolog also exists. ; Adjacent gene is probable acyl-CoA thiolase ; clustered with cioA ; clustered with cioB ; 5-gene cluster conserved with E.coli. ; 5-gene sequence conserved with E. coli ; five-gene cluster conserved with E. coli ; One of a five-gene cluster conserved with E. coli ; Near leuS, as in E. coli. ; Next to lipoate-protein ligase. ; Next to a lipoate synthetase. ; Adjacent genes encode homologs of lipB and dacA, as in E. coli. ; Similar but not identical to that in E. coli, with mrdB homolog upstream (separated by one gene and dacA, ybeD, lipBA downstream ; 3-gene cluster conserved with E.coli, related to peptidoglycan and cell shape. ; 3-gene cluster conserved with E. coli, concerned with peptidoglycan and cell shape. ; Next to RodA, a rod shape determining protein. ; 2 adjacent genes strongly homologous to 2-gene cluster of both E. coli and H. influenzae. ; 2 adjacent genes strongly homologous to 2-gene cluster of both E. coli and H. influenzae. ; Adjacent to two genes probably encoding ethanolamine ammonia lyase. ; Probable small subunit of ethanolamine ammonia-lyase encoded by downstream gene, probable permease by upstream. ; Adjacent genes encode probable ethanolamine permease (EutP) and ethanolamine ammonia-lyase large subunit (EutB). ; [CATALYTIC ACTIVITY] PYROPHOSPHATE + H(2)O = 2 ORTHOPHOSPHATE. [SUBUNIT] HOMOHEXAMER. [COFACTOR] THIS ENZYME REQUIRES THE PRESENCE OF DIVALENT METAL CATION. MAGNESIUM CONFERS THE HIGHEST ACTIVITY. BINDS 4 DIVALENT CATIONS PER SUBUNIT. [SUBCELLULAR LOCATION] CYTOPLASMIC. [SIMILARITY] TO OTHER PPASES. ; Adjacent gene encodes pyrophosphatase. ; Upstream of ispA gene, as in E. coli. ; dxs and ispA ( in the same pathway) are adjacent in both P. aeruginosa and E. coli ; Adjacent to riboflavin biosynthetic gene ribE, as in E. coli ; 4-gene cluster of riboflavin biosynthetic genes in same order as the B. subtilis homologs, with an additional ribA homolog 5 genes downstream. Adjacent to homolog of E. coli nusB, as in E. coli. ; 4-gene cluster of riboflavin biosynthetic genes in same order as the B. subtilis homologs, with an additional ribA homolog separated by 5 genes. ; 4-gene cluster of riboflavin biosynthetic genes in same order as the B. subtilis homologs, with an additional ribA homolog 5 genes downstream. ; 4-gene cluster of riboflavin biosynthetic genes in same order as the B. subtilis homologs, with an additional ribA homolog 5 genes downstream. ; Next to another protein possibly involved in sugar metabolism based upon slim homology. ; Next to another conserved hypothetical protein possibly involved in sugar metabolism based upon slim homology. ; Cluster of genes involved in pilin assembly ; Next to probable 4-hydroxyphenylacetate 3-hydroxylase small chain ; coupling protein of 4-HPA hydroxylase. ; Next to 4-hydroxyphenylacetate 3-monooxygenase large chain. ; Next to the ampC gene, expressing a Class C beta-lactamase. ; Next to the ampR gene, expressing a Beta-lactamase regulatory protein. ; 1st in a cluster of 7 genes probably involved in the (meta-cleavage) HOMOPROTOCATECHUATE catabolic pathway. ; 3rd in a cluster of 7 genes probably involved in the (meta-cleavage) HOMOPROTOCATECHUATE catabolic pathway. ; 4th in a cluster of 7 genes probably involved in the (meta-cleavage) HOMOPROTOCATECHUATE catabolic pathway. ; Cluster of genes probably involved in the (meta-cleavage) homoprotocatechuate catabolic pathway. ; 5th in a cluster of 7 genes probably involved in the (meta-cleavage) HOMOPROTOCATECHUATE catabolic pathway. ; 6th in a cluster of 7 genes probably involved in the (meta-cleavage) HOMOPROTOCATECHUATE catabolic pathway. ; 7th in a cluster of 7 genes probably involved in the (meta-cleavage) HOMOPROTOCATECHUATE catabolic pathway. ; Not in fixNOPQ operon as homologs are. A FixG homolog is two genes away. ; clustered with CvaB homolg ; Separated from cluster of fep genes (ferric enterobactin transport) by one intervening gene. ; In a cluster with several homologs to other fep genes of E. coli. The gene order is fepCBDG, which is different from E. coli. ; In a cluster with several homologs to other fep genes of E. coli. The gene order is fepCBDG, which is different from E. coli. ; In a cluster with several homologs to other fep genes of E. coli. The gene order is fepCBDG, which is different from E. coli. ; In a cluster with several homologs to other fep genes of E. coli. The gene order is fepCBDG, which is different from E. coli. ; fixLJ ; Third ORF in gene cluster resembling RND efflux pump organization. ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; PhzABCDEFG (Pseudomonas fluorescens) ; PhzFABCD (Pseudomonas aureofaciens) ; fptAB ; fptAB (Pseudomonas aeruginosa) ; pchABCDREF (Pseudomonas aeruginosa) ; pchABCDREF (Pseudomonas aeruginosa) ; gene cluster:pchABCDR ; iron-regulated pchDCBA (Pseudomonas aeruginosa) ; pchDCBA (Pseudomonas aeruginosa) ; iron-regulated pchDCBA operon in Pseudomonas aeruginosa ; iron-regulated pchDCBA operon in Pseudomonas aeruginosa ; b3298-b3294 (Ecoli) alpha operon ; b3298-b3294 (Ecoli) alpha operon ; b3298-b3294 (Ecoli) alpha operon ; b3298-b3294 (Ecoli) alpha operon ; b3298-b3294 (Ecoli) alpha operon ; b3300-3301 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3301-3310 (Ecoli) spc operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) S10 operon ; b3311-3321 (Ecoli) [S10 operon] ; b3311-3321 (Ecoli) S10 operon ; b3342-b3339 (Ecoli)[str operon] ; b3342-b3339 (Ecoli)[str operon] ; b3342-b3339 (Ecoli)[str operon] ; b3342-b3339 (Ecoli)[str operon] ; b3980-b3988 (Ecoli) L10 operon ; b3980-b3988 (Ecoli) L10 operon ; b3980-b3988 (Ecoli) L10 operon ; b3980-b3988 (Ecoli) L10 operon ; b3980-b3988 (Ecoli) L11 operon ; b3980-b3988 (Ecoli) L11 operon ; b3980-b3988 (Ecoli) ; b3980-b3988 (Ecoli) ; b3980-b3988 (Ecoli) ; 3' of probable sbcD homolog. Similar organization to E. coli. ; Gene cluster of probable recC/B/D ORFs, similar arrangement to E. coli and other bacteria ; Gene cluster of recCBD ORFs, similar arrangement to E. coli and other bacteria. ; Gene cluster of recCBD ORFs, similar arrangement to E. coli and other bacteria ; pctBC ; pctC orf1 pctA pctB (Pseudomonas aeruginosa) ; pctC orf1 pctA pctB (Pseudomonas aeruginosa) ; pctC orf1 pctA pctB (Pseudomonas aeruginosa) ; 3' to groES (CPN10) ; 5' to groEL (CPN60) ; Potential sensor in downstream ORF ; Similar gene arrange to E. coli, downstream of fts genes ; probable operon ftsQ/A/Z. Same gene arrangement as E. coli ; Probable operon ftsQ/A/Z. Same gene arrangement as E. coli ; Probable operon ftsQ/A/Z. Same gene arrangement as E. coli ; Same gene arrangement as E. coli, 5' of fts cell division gene cluster ; Identical flanking gene arrangement to E. coli ; Flanking gene arrangement is identical to E. coli ; Flanking gene arrangement is identical to E. coli ; Flanking gene arrangement is identical to E. coli ; Flanking gene arrangement is identical to E. coli ; Flanking gene arrangement is identical to E. coli ; Flanking gene arrangement is identical to E. coli ; Flanking gene arrangement is identical to E. coli ; flanking gene arrangement is identical to E. coli. ; Flanking gene arrangement is identical to E. coli ; Downstream gene arrangement is identical to E. coli ; Similar gene arrangement to E. coli (yraL,M,N,O,P) ; Similar gene arrangement to E. coli (yraL,M,N,O,P) ; Similar gene arrangement to E. coli (yraL,M,N,O,P) ; Similar gene arrangement to E. coli (yraL,M,N,O,P) ; Similar gene arrangement to E. coli (yraL,M,N,O,P) ; Same arrangement as in E. coli: sspA-sspB ; same arrangement as in E. coli: sspA-sspB ; Downstream of probable cytochrome b gene ; Upstream of probable cytochrome c1 precursor gene ; Upstream of probable cytochrome b and c1 genes. ; Adjacent to rplM, as in E. coli. ; Adjacent to rpsI, as in E. coli. ; Downstream of cysD, parallel gene arrangement to E. coli except PAO1 sequence shows fusion of the ATP sulfurylase GTP-binding subunit and the APS kinase protein (CysN and CysC) ; Upstream of cysN ; parallel gene arrangment to E. coli except PAO1 sequence shows fusion of the ATP sulfurylase GTP-binding subunit and the APS kinase protein (CysN and CysC) ; Gene cluster: hisG/D/C. Parallel gene arrangement to E. coli. ; Gene cluster: hisG/D/C ; Gene cluster: his G/D/C ; This region of PAO1 from murA through rpoN shows very similar ORF organization to E. coli. ; Upstream of rpoN gene cluster ; same genomic arrangment as is seen in E. coli ; Upstream of rpoN gene cluster ; same genomic arrangment as is seen in E. coli ; Upstream of rpoN gene cluster ; same genomic arrangment as is seen in E. coli ; Upstream of rpoN gene cluster ; same genomic arrangment as isseen in E. coli ; Upstream of rpoN gene cluster ; same genomic arrangment as is seen in E. coli ; Upstream of rpoN gene cluster ; same genomic arrangment as is seen in E. coli ; PAO1 and E. coli share the same gene arrangement in the region of the rpoN operon, described in E. coli ; PAO1 and E. coli share the same gene arrangement in the region of the rpoN operon, described in E. coli ; PAO1 and E. coli share the same gene arrangement in the region of the rpoN operon, described in E. coli ; PAO1 and E. coli share the same gene arrangement in the region of the rpoN operon, described in E. coli. ; fagA, fumC, orfX, and sodA genes reside together on a small operon ; fagA, fumC, orfX, and sodA genes reside together on a small operon ; fagA, fumC, orfX, and sodA genes reside together on a small operon ; fagA, fumC, orfX, and sodA genes reside together on a small operon ; Adjacent to yjgA, as in E. coli. ; Adjacent to pmbA, as in E. coli. ; PAO1 and E. coli share a similar gene arrangement in this region: mreBCD cluster, yhdE hypothetical gene, and cafA. ; Same genomic arrangement as in E. coli: adjacent to mreBCD gene cluster ; mreB, C, and D genes are clustered as in E. coli ; mreB, C, and D genes are clustered as in E. coli ; mreB, C, and D genes are clustered as in E. coli ; Adjacent to ORFs encoding probable Glu tRNA gln subunits A and B ; Adjacent to ORFs encoding probable Glu tRNA Gln subunits B and C ; Adjacent to ORFs encoding probable Glu tRNA gln subunits A and C ; Similar arrangement to E. coli hypothetical ORFs b2225 thru b2230 ; Similar arrangement to E. coli hypothetical ORFs b2225 thru b2230 ; Similar arrangement to E. coli hypothetical ORFs b2225 thru b2230 ; Similar arrangement to E. coli hypothetical ORFs b2225 thru b2230. ; Similar arrangement to E. coli hypothetical ORFs b2225 thru b2230. ; Similar arrangement to E. coli hypothetical ORFs b2225 thru b2230 ; dppFDCB (b3540-b3543)(Ecoli) ; dppFDCB (b3540-b3543)(Ecoli) ; dppFDCB (b3540-b3543)(Ecoli) ; dppFDCB (b3540-b3543)(Ecoli) ; piuCAB (Pseudomonas aeruginosa) ; piuCAB (Pseudomonas aeruginosa) ; piuCAB (Pseudomonas aeruginosa) ; Adjacent to AmpD homologue. ; Type IV-A pilus assembly operon: pilABCD and yacE ; Type IV-A pilus assembly operon: pilABCD and yacE ; Type IV-A pilus assembly operon: pilABCD and yacE ; Type IV-A pilus assembly operon: pilABCD and yacE ; Type IV-A pilus assembly operon: pilABCD and yacE ; b2595-b2592 (E. coli) ; b2595-b2592 (E. coli) ; b2595-b2592 (E. coli) ; b2595-b2592 (E. coli) ; It forms a operon with pilR ; pilRS (Pseudomonas aeruginosa) ; fimUT (Pseudomonas aeruginosa) ; fimUT (Pseudomonas aeruginosa) ; PilEY2Y1XWV (Pseudomonas aeruginosa) ; PilEY2Y1XWV (Pseudomonas aeruginosa) ; PilEY2Y1XWV (Pseudomonas aeruginosa) ; PilEY2Y1XWV (Pseudomonas aeruginosa) ; PilEY2Y1XWV (Pseudomonas aeruginosa) ; PilEY2Y1XWV ; b0025-b0029 (Ecoli) ; Context of five ORFs found in P. fluorescens, E. coli, and Enterobacter aerogenes. ; b0025-b0029 (Ecoli) ; b0025-b0029 (E. coli) ; b0025-b0029 (Ecoli) ; mviN-like gene has replaced b0024 between the rpsT (b0023) and yaaC-like gene (b0025) upstream of ileS (b0026) in PA01. ; b3419-b3422 (+2 insertions)Ecoli ; b3419-b3422 (+2 insertions) E. coli. ; b3419-b3422 (+2 insertions)Ecoli ; b3419-b3422 (+2 insertions)Ecoli ; Part of the mexCD-oprJ operon ; Part of the mexCD-oprJ operon ; 1 of 3 contiguous ORFs conserved with E. coli. ; 1 of 3 contiguous ORFs conserved with E. coli. ; Adjacent gene is weakly homologous to hxuA and genes of other surface-exposed H. influenzae proteins ; Adjacent to homolog of hxuB [Haemophilus influenzae] ; Conserved location adjacent to uracil permease gene, uraA. ; Conserved location adjacent to uracil phosphoribosyltransferase gene, upp. ; The E. coli gene sequence prsA-ychB-hemM-hemA-prfA-hemK is maintained in P. aeruginosa, with one gene intervening between hemA and the hemM homolog. ; The E. coli gene sequence prsA-ychB-hemM-hemA-prfA-hemK is maintained in P. aeruginosa, with one gene intervening between hemA and the hemM homolog. ; The E. coli gene sequence prsA-ychB-hemM-hemA-prfA-hemK is maintained in P. aeruginosa, with one gene intervening between hemA and the hemM homolog. ; Region of about 7 genes with homology to clustered E. coli genes. ; Conserved location upstream of prs ; Adjacent to ychF as in E. coli. ; ilvIHC gene cluster ; ilvIHC gene cluster ; ilvIHC gene cluster ; phuR-W (Pseudomonas aeruginosa) ; phuRSTUVW (Pseudomonas aeruginosa) ; phuR-W ; phuR-W ; phuR-W (Pseudomonas aeruginosa) ; phuR-W (Pseudomonas aeruginosa) ; In the pcnB-dksA intergenic region ; Upstream of a probable response regulator. ; Downstream of a probable sensory transduction histidine kinase. ; Adjacent to folK gene, as in E. coli ; Adjacent to pcnB gene, as in E. coli ; Adjacent to panCD ORFS, as in E. coli ; Between panB and panD genes, as in E. coli ; Adjacent to panBC ORFs, as in E. coli ; b3164-b3169 (E. coli) ; b3164-b3169 (E. coli) ; b3164-b3169 (E. coli) ; b3164-b3169 (E. coli) ; b3164-b3169 (E. coli) ; b3164-b3169 (E. coli) ; conserved location upstream of nusA ; Upstream of dnaJ ; Adjacent to dnaK and dnaJ genes, unlike E. coli. ; Adjacent genes also are strongly homologous to genes of the L-lactate operon of E. coli, lldP and lldD. ; Located between a homolog for lldD and a homolog for lldR ; Downstream of homologs to the lldP and lldR genes. ; Adjacent to L-lactate dehydrogenase operon. ; Immediately upstream from the top hit for ygiY. ; Immediately downstream of the top hit for ygiX. ; Upstream of selB. ; Downstream of fdnGHI and upstream of selAB. ; Only lipoamide dehydrogenase that is not part of operon ; Similar context as paralog ; near a two-component regulatory system. ; form a 2-gene cluster with ACC in upstream ; forms a probable operon with accB in downstream ; Adjacent to purD, as in E. coli. ; Adjacent to purH, as in E. coli. ; clustered with ureA ; ureEFG (Klebsiella aerogenes) ; ureEFG (Klebsiella aerogenes) ; ureEFG (Klebsiella aerogenes) ; b3458-b3454 (E. coli) This is the correct genomic context for both LivJ and LivK orthologs, but the best hit for both is one gene elsewhere in the genome. ; In cluster with rpsF, rpsR, & a hypothetical ORF ; a context similar, but not identical to E. coli. ; In cluster with rpsF, rpsR, rplI. To what end? ; In cluster with rpsF, hypothetical ORF & rplI ; a context similar, but not identical to E. coli. ; In cluster with rpsR, hypothetical ORF & rplI ; a context similar, but not identical to E. coli. ; Between purA & yjfH, as in E. coli. ; The hflC-hisX-purA sequence is common to both P. stutzeri and PA01. ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; adjacent gene is mutL ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; b4165-b4175 (E. coli) ; motAB (Pseudomonas aeruginosa) ; motAB (Pseudomonas aeruginosa) ; Near parE gene, as in E. coli. ; b3034-b3030 (E. coli) & near parC gene, as in E. coli. ; b3034-b3030 (E. coli) ; b3034-b3030 (E. coli) ; b3034-b3030 (E. coli) ; b3034-b3030 (E. coli) ; Not in operon with other thiamine biosynthetic proteins as in E. coli. ; Just downstream of waa/wap gene cluster. ; Just downstream of waa gene cluster. ; Just downstream of waa gene cluster. ; Cluster of waa (rfa) genes (waaF,C,G,P) ; Cluster of waa (rfa) genes (waaF,C,G,P) ; Cluster of waa (rfa) genes (waaF,C,G,P) ; Cluster of waa (rfa) genes (waaF,C,G,P) ; No apparent operon structure as in E. coli ilvGMEDA ; E1 and E2 components confirmed to be single polycistronic transcript. ; E1 and E2 components confirmed to be single polycistronic transcript. ; MetX and MetY are not adjacent as they are in L. meyeri. ; conserved location adjacent to ynfM. ; In operon with gltB ; In operon with gltD ; Adjacent to aroB, as in E. coli ; pilMNOPQ (Pseudomonas aeruginosa) ; pilMNOPQ (Pseudomonas aeruginosa) ; pilMNOPQ (Pseudomonas aeruginosa) ; pilMNOPQ (Pseudomonas aeruginosa) ; pilMNOPQ (Pseudomonas aeruginosa) ; Adjacent to priA, as in E. coli. Downstream context differs. ; Adjacent to rpmE, as in E. coli. ; This ORF's location adjacent to hslV is consistent with it being the PA01 homolog of E. coli FtsN. ; form an operon with hslU ; form an operon with hslV ; phaIF and phaDCBA gene cluster ; phaIF and phaDCBA gene cluster ; phaIF and phaDCBA gene cluster ; Adjacent to phaIF and phaDCBA homologs ; Downstream genes are phaFDCBA homologs ; upstream gene is homologous to the gene upstream of phaI in P. oleovorans ; Adjacent to phaIF and phaDCBA homologs ; Adjacent to gene encoding ubiquinone/menaquinone biosynthesis methlytransferase UbiE ; Adjacent gene (hisE) encodes phosphoribosyl-ATP pyrophosphohydrolase, which carries out the previous step in histidine synthesis. ; Adjacent gene (hisI) encodes phosphoribosyl c-AMP hydrolase, which carries out the next step in histidine synthesis. ; Adjacent to tatBC (formerly mttAB ; yigTUW) ; a tatD (mttC) homolog is elsewhere. ; Adjacent to tatA and tatC (formerly mttAB ; yigTU) ; a tatD (yigW, mttC) homolog is elsewhere. PA01 has 3 adjacent genes that are good homologs of tatA and tatC, but the tatB homolog is only 43% similar. Quality is poor. Note also that the tatB and tabC homologs are very similar to different parts of orf4 of Azotobacter. Frameshift? ; Adjacent to tatAB (formerly mttA ; yigT and W) ; a tatD (mttC) homolog is elsewhere. ; two genes form the mdoGH operon ; Adjacent to hutU, as in P. putida. ; forms a cluster with ntrC ; forming a probable operon with ntrB at upstream ; hisBHA and F are adjacent genes, as in E. coli. In a separate part of the PA01 genome are paralogs of hisH and F. ; hisBHA and F are adjacent genes, as in E. coli. ; hisBHA and F are adjacent genes, as in E. coli. In a separate part of the PA01 genome are paralogs of hisH and F. ; hisBHA and F are adjacent genes, as in E. coli. ; Adjacent to mutY, as in E. coli. ; First of four ORF cluster. ; Second of four ORF cluster. ; Third of four ORF cluster. ; Fourth of four ORF cluster. ; First of four ORF cluster. ; Second of four ORF cluster ; Third of four ORF cluster. ; Fourth of four ORF cluster. ; First of four ORF cluster. ; Second of four ORF cluster. ; Third of four ORF cluster. ; Fourth of a four ORF cluster. ; clustered with probable dctDPM ; clustered with dctBPM ; Third of five ORF cluster. ; Fourth of five ORF cluster. ; Fifth of five ORF cluster. ; 3-gene arginine deiminase cluster arcCBA, followed by arginine/ornithine antiporter arcD ; 3-gene arginine deiminase cluster arcCBA, followed by arginine/ornithine antiporter arcD ; 3-gene arginine deiminase cluster arcCBA, followed by arginine/ornithine antiporter arcD ; 3-gene arginine deiminase cluster arcCBA, followed by arginine/ornithine antiporter arcD ; Unlike E. coli, not adjacent to yrfH. ; Unlike E. coli, not in operon with yrfL ; Adjacent to ompR, as in E. coli. ; Adjacent to envZ, as in E. coli. ; Adjacent to a probable permease, as in H. influenzae. ; Third ORF of gcvTHP operon ; Second ORF of gcvTHP operon ; First ORF of gcvTHP operon ; Adjacent to ynfM-like ORF, as in E. coli. ; Adjacent to ORF with similarity to ynfL, as in E. coli. ; Downstream of visB, as in E. coli, but unlike coli, separated by >400 bp. ; Downstream of pepP, as in E. coli. ; Upstream of ubiH, as in E. coli. ; Upstream of pepP, ubiH, and visC, as in E. coli. ; Third of three ORF cluster, as in E. coli. ; Second of three ORF cluster, as in E. coli. ; First of three ORF cluster, as in E. coli. ; Adjacent to ppx, an exopolyphosphatase, as in E. coli. ; In Alg region ; Downstream of hemCDX, as in E. coli. ; Downstream of hemCD ORFs, as in E. coli. ; algZR ; algZR ; First of six ORF cluster. ; Seocnd of six ORF cluster. ; Third of six ORF cluster. ; Between xerC & dapF, as in P. fluorescens and E. coli. Fourth of six ORF cluster. ; Downstream of dapF, as in P. fluorescens and E. coli. Fifth of six ORF cluster. ; Downstream of xerC/sss, as in E. coli and P. fluorescens. Sixth of six ORF cluster. ; Adjacent to glnK, as in E. coli ; Adjacent to amtB, as in E. coli. ; Near dadX, but unlike E. coli, not adjacent to it. ; Adjacent to rpmB, as in E. coli. ; Adjacent to rpmG, as in E. coli. ; Adjacent to dut and dfp genes, as in E. coli. ; Between dut and radC genes, as in E. coli. ; Adjacent to dfp and radC genes, as in E. coli. ; Between yicC and purE, similar to E. coli. ; Adjacent to pair of rubredoxin ORFs. ; Fourth of four ORF cluster. ; Third of four ORF cluster. ; Second of four ORF cluster. ; First of four ORF cluster. ; Adjacent to glcDEFG ; Upstream of phoR. ; phoRB ; Gene order of the pst operon is pstC, pstA, pstB, phoU. ; Gene order of the pst operon is pstC, pstA, pstB, phoU. ; Gene order of the pst operon is pstC, pstA, pstB, phoU. ; Gene order of the pst operon is pstC, pstA, pstB, phoU. ; Adjacent to betI and betB genes, like E. coli ; Between betI and betA genes, like E. coli ; Between betT and betB genes, like E. coli ; Adjacent to and transcribed oppositely from betIAB ORFs, like E. coli ; The immediately upstream genes encode probable permease and ATPase components of an ABC transporter, with strongest homology to glycine-betaine/proline transport proteins ProV and ProW. Further upstream genes are betABIT for betaine metabolism. ; Adjacent to yeiH ORF, as in E. coli ; 3-gene cluster with probable FMN oxidoreductase, probable ferredoxin, and probable electron transfer flavoprotein ; 3-gene cluster with probable FMN oxidoreductase, probable ferredoxin, and probable electron transfer flavoprotein ; 3-gene cluster with probable FMN oxidoreductase, probable ferredoxin, and probable electron transfer flavoprotein ; Adjacent protein is a ferredoxin. The two together probably make up a ring-hydroxylating dioxygenase. ; Adjacent gene encodes glutathione-independent formaldehyde dehydrogenase. ; purEK are adjacent, as in E. coli. ; purEK are adjacent, as in E. coli. ; adjacent gene is homologous to biotin carboxylase subunit of acetyl-CoA decarboxylase ; Adjacent gene encodes the alpha subunit of a biotin-requiring decarboxylase (or transcarboxylase) ; Eighth of eight ORF cluster ; Seventh of eight ORF cluster ; Sixth of eight ORF cluster ; Fifth of eight ORF cluster. ; Fourth of eight ORF cluster ; Third of eight ORF cluster ; Second of eight ORF cluster. ; First of eight ORF cluster ; next to cytochrome c4. Also the case in [Azotobacter vinelandii] ; In E. coli, glmS and glmU form a single operon. In PA they are separated by this orf and a putative regulator. ; Downstream of ATP synthase operon ; Part of ATP synthase operon ; Part of ATP synthase operon ; Part of ATP synthase operon ; Part of ATP synthase operon ; Part of ATP synthase operon ; Part of ATP synthase operon ; Part of ATP synthase operon ; Part of ATP synthase operon ; Adjacent to ATP synthase operon ; Conserved location adjacent to soj gene. ; Conserved location adjacent to soj gene. ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; Genomic_Context ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; b3699-b3706 (Ecoli) ; glyQS (Ecoli) ; glyQS (Ecoli) ; b3287-b3290 (Ecoli) ; b3287-b3290 (Ecoli) ; b3287-b3290 (Ecoli) ; trpABI (Pseudomonas aeruginosa) ; trpABI (Pseudomonas aeruginosa) ; trpABI (Pseudomonas aeruginosa)",""SPTR top hit: 'Q52417 RulB. Pseudomonas syringae., evalue=0.0, 77% identity hit'" ; "SPTR top hit: 'Q881F2 Feruloyl-CoA-synthetase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 93% identity hit'" ; "SPTR top hit: 'Q881F8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-160, 95% identity hit'" ; "SPTR top hit: 'Q881J1 Glutamine amidotransferase, putative. Pseudomonas syringae (pv. tomato)., evalue=1e-123, 87% identity hit'" ; "SPTR top hit: 'Q87UN0 Zinc ABC transporter, ATP-binding protein. Pseudomonas syringae (pv. tomato)., evalue=1e-139, 93% identity hit'" ; "SPTR top hit: 'Q79E79 Aminoglycoside 3'-phosphotransferase. Plasmid pLS88., evalue=1e-117, 100% identity hit'" ; "SPTR top hit: 'Q8XQ30 PUTATIVE OUTER MEMBRANE LIPOPROTEIN. Ralstonia solanacearum (Pseudomonas solanacearum)., evalue=1e-124, 53% identity hit'" ; "SPTR top hit: 'Q92EU6 Lin0362 protein. Listeria innocua., evalue=3e-72, 55% identity hit'" ; "SPTR top hit: 'Q88AQ1 Sensory box histidine kinase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 93% identity hit'" ; "SPTR top hit: 'Q881S5 GGDEF domain protein. Pseudomonas syringae (pv. tomato)., evalue=1e-151, 73% identity hit'" ; "SPTR top hit: 'Q9I2G0 Hypothetical protein. Pseudomonas aeruginosa., evalue=0.0, 73% identity hit'" ; "SPTR top hit: 'Q881U9 UvrD/REP helicase family protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 91% identity hit'" ; "SPTR top hit: 'Q881X6 Outer membrane efflux protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 91% identity hit'" ; "SPTR top hit: 'Q882D8 Lipoprotein, putative. Pseudomonas syringae (pv. tomato)., evalue=4e-25, 70% identity hit'" ; "SPTR top hit: 'Q882F7 Transcriptional regulator, GntR family. Pseudomonas syringae (pv. tomato)., evalue=1e-128, 95% identity hit'" ; "SPTR top hit: 'Q882G9 NAD(P)H-flavin oxidoreductase. Pseudomonas syringae (pv. tomato)., evalue=1e-108, 93% identity hit'" ; "SPTR top hit: 'Q882I5 Sensor histidine kinase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 80% identity hit'" ; "SPTR top hit: 'Q882L1 GAF domain protein. Pseudomonas syringae (pv. tomato)., evalue=3e-74, 82% identity hit'" ; "SPTR top hit: 'Q882T8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=3e-41, 93% identity hit'" ; "SPTR top hit: 'Q882V4 Bacterial extracellular solute-binding domain protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q9I125 Hypothetical protein. Pseudomonas aeruginosa., evalue=3e-62, 45% identity hit'" ; "SPTR top hit: 'Q9I125 Hypothetical protein. Pseudomonas aeruginosa., evalue=4e-63, 56% identity hit'" ; "SPTR top hit: 'Q882W1 Methyl-accepting chemotaxis protein. Pseudomonas syringae (pv. tomato)., evalue=6e-46, 91% identity hit'" ; "SPTR top hit: 'Q87ZW1 General secretion pathway protein K, putative. Pseudomonas syringae (pv. tomato)., evalue=8e-12, 61% identity hit'" ; "SPTR top hit: 'Q87ZW1 General secretion pathway protein K, putative. Pseudomonas syringae (pv. tomato)., evalue=2e-55, 68% identity hit'" ; "SPTR top hit: 'Q8KPR7 Hypothetical protein SEE0027. Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2)., evalue=2e-43, 37% identity hit'" ; "SPTR top hit: 'Q882L7 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=5e-73, 84% identity hit'" ; "SPTR top hit: 'Q882G8 Aldehyde dehydrogenase family protein. Pseudomonas syringae (pv. tomato)., evalue=4e-28, 68% identity hit'" ; "SPTR top hit: 'Q883J8 Ureidoglycolate dehydrogenase. Pseudomonas syringae (pv. tomato)., evalue=1e-177, 91% identity hit'" ; "SPTR top hit: 'Q883Q7 Esterase/lipase/thioesterase family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-166, 85% identity hit'" ; "SPTR top hit: 'Q883Q8 Phosphoenolpyruvate synthase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 98% identity hit'" ; "SPTR top hit: 'Q88BD4 Phosphomannomutase/phosphoglucomutase (EC 5.4.2.8) (EC 5.4.2.2) (PMM / PGM). Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q883R6 Membrane protein, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 97% identity hit'" ; "SPTR top hit: 'Q883T2 Acyl-CoA thioesterase I. Pseudomonas syringae (pv. tomato)., evalue=1e-99, 92% identity hit'" ; "SPTR top hit: 'Q883U9 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-178, 93% identity hit'" ; "SPTR top hit: 'Q883Y4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H- dependent glycerol-3-phosphate dehydrogenase). Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q884B1 Electron transfer flavoprotein, beta subunit. Pseudomonas syringae (pv. tomato)., evalue=1e-128, 98% identity hit'" ; "SPTR top hit: 'Q884D0 Aspartate aminotransferase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q884F1 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-85, 82% identity hit'" ; "SPTR top hit: 'Q884G2 Sensor histidine kinase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 86% identity hit'" ; "SPTR top hit: 'Q87ZN6 DNA adenine methylase, putative. Pseudomonas syringae (pv. tomato)., evalue=1e-37, 77% identity hit'" ; "SPTR top hit: 'Q87ZJ7 C-5 cytosine-specific DNA methylase family protein. Pseudomonas syringae (pv. tomato)., evalue=3e-42, 95% identity hit'" ; "SPTR top hit: 'O03965 Hypothetical protein (P14). Bacteriophage Mx8., evalue=5e-14, 48% identity hit'" ;  ; "SPTR top hit: 'Q9KXM0 Putative integral membrane efflux protein. Streptomyces coelicolor., evalue=5e-25, 26% identity hit'" ; "SPTR top hit: 'Q884H6 Response regulator. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q842M5 RulB. Pseudomonas cichorii., evalue=5e-10, 76% identity hit'" ; "SPTR top hit: 'Q884M9 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 99% identity hit'" ; "SPTR top hit: 'Q884N6 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-86, 93% identity hit'" ; "SPTR top hit: 'Q884Q3 GTP cyclohydrolase I 2 (EC 3.5.4.16) (GTP-CH-I 2). Pseudomonas syringae (pv. tomato)., evalue=2e-93, 97% identity hit'" ; "SPTR top hit: 'Q9I372 Probable transcriptional regulator. Pseudomonas aeruginosa., evalue=5e-48, 65% identity hit'" ; "SPTR top hit: 'Q59654 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase). Pseudomonas aeruginosa., evalue=1e-115, 92% identity hit'" ; "SPTR top hit: 'Q87YV3 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 91% identity hit'" ; "SPTR top hit: 'Q7WMX0 Putative ArsR-family transcriptional regulator. Bordetella bronchiseptica (Alcaligenes bronchisepticus)., evalue=9e-13, 64% identity hit'" ; "SPTR top hit: 'Q87YS6 ABC transporter, periplasmic substrate-binding protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 97% identity hit'" ; "SPTR top hit: 'Q88B12 HAD-superfamily hydrolase. Pseudomonas syringae (pv. tomato)., evalue=1e-121, 92% identity hit'" ; "SPTR top hit: 'Q87YJ8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-172, 86% identity hit'" ; "SPTR top hit: 'Q87YF7 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-KDO synthetase) (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS). Pseudomonas syringae (pv. tomato)., evalue=1e-135, 94% identity hit'" ; "SPTR top hit: 'Q87YE5 ABC transporter, ATP-binding protein. Pseudomonas syringae (pv. tomato)., evalue=1e-167, 97% identity hit'" ; "SPTR top hit: 'Q88AZ5 33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33). Pseudomonas syringae (pv. tomato)., evalue=1e-164, 95% identity hit'" ; "SPTR top hit: 'Q8GPQ7 Putative DNA topoisomerase III. Pseudomonas aeruginosa., evalue=8e-12, 64% identity hit'" ; "SPTR top hit: 'Q88FR4 DNA topoisomerase III. Pseudomonas putida (strain KT2440)., evalue=4e-14, 68% identity hit'" ; "SPTR top hit: 'Q88A06 ImpB/mucB/samB family protein. Pseudomonas syringae (pv. tomato)., evalue=2e-46, 80% identity hit'" ; "SPTR top hit: 'Q93TD6 Hypothetical protein. Pseudomonas syringae (pv. maculicola)., evalue=1e-173, 94% identity hit'" ; "SPTR top hit: 'Q93TE4 Hypothetical protein. Pseudomonas syringae (pv. maculicola)., evalue=1e-21, 88% identity hit'" ; "SPTR top hit: 'Q93TE4 Hypothetical protein. Pseudomonas syringae (pv. maculicola)., evalue=2e-99, 80% identity hit'" ; "SPTR top hit: 'Q8GQ47 Hypothetical protein ORF C63. Pseudomonas aeruginosa., evalue=0.0, 74% identity hit'" ; "SPTR top hit: 'Q87Y28 Cold shock domain family protein. Pseudomonas syringae (pv. tomato)., evalue=7e-36, 100% identity hit'" ; "SPTR top hit: 'Q886L5 Acid phosphatase surE (EC 3.1.3.2). Pseudomonas syringae (pv. tomato)., evalue=1e-133, 93% identity hit'" ; "SPTR top hit: 'Q886M1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT). Pseudomonas syringae (pv. tomato)., evalue=1e-128, 95% identity hit'" ; "SPTR top hit: 'Q886P7 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-134, 83% identity hit'" ; "SPTR top hit: 'Q886T8 Single-stranded-DNA-specific exonuclease RecJ. Pseudomonas syringae (pv. tomato)., evalue=0.0, 97% identity hit'" ; "SPTR top hit: 'Q886V0 tRNA (Guanine-N(1)-)-methyltransferase (EC 2.1.1.31) (M1G- methyltransferase) (tRNA [GM37] methyltransferase). Pseudomonas syringae (pv. tomato)., evalue=1e-140, 99% identity hit'" ; "SPTR top hit: 'Q886W7 Periplasmic binding domain/transglycosylase SLT domain fusion protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 95% identity hit'" ; "SPTR top hit: 'Q88AW5 TonB system transport protein, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 98% identity hit'" ; "SPTR top hit: 'Q9L6V9 Hypothetical protein. Pseudomonas syringae (pv. syringae)., evalue=3e-65, 100% identity hit'" ; "SPTR top hit: 'Q9L6V8 Hypothetical protein. Pseudomonas syringae (pv. syringae)., evalue=3e-81, 100% identity hit'" ; "SPTR top hit: 'Q9L6V8 Hypothetical protein. Pseudomonas syringae (pv. syringae)., evalue=0.0, 100% identity hit'" ; "SPTR top hit: 'Q60243 HrpE. Pseudomonas syringae (pv. syringae)., evalue=5e-97, 96% identity hit'" ; "SPTR top hit: 'Q887E0 Isochorismatase family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-128, 94% identity hit'" ; "SPTR top hit: 'Q887G5 Acetyltransferase, CysE/LacA/LpxA/NodL family. Pseudomonas syringae (pv. tomato)., evalue=1e-100, 89% identity hit'" ; "SPTR top hit: 'Q887H4 Acetyltransferase, GNAT family. Pseudomonas syringae (pv. tomato)., evalue=9e-54, 67% identity hit'" ; "SPTR top hit: 'Q887K1 Sensor histidine kinase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q887L2 Transcriptional regulator TyrR, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q87UU8 Conserved domain protein. Pseudomonas syringae (pv. tomato)., evalue=1e-23, 88% identity hit'" ; "SPTR top hit: 'Q98KW9 Aspartate transaminase. Rhizobium loti (Mesorhizobium loti)., evalue=9e-16, 23% identity hit'" ; "SPTR top hit: 'Q7VTY0 Hypothetical protein. Bordetella pertussis., evalue=7e-13, 34% identity hit'" ; "SPTR top hit: 'Q66BI8 Hypothetical protein. Yersinia pseudotuberculosis IP 32953., evalue=9e-48, 42% identity hit'" ; "SPTR top hit: 'Q884J6 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=3e-12, 70% identity hit'" ; "SPTR top hit: 'Q884J6 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=3e-08, 75% identity hit'" ; "SPTR top hit: 'Q66BI8 Hypothetical protein. Yersinia pseudotuberculosis IP 32953., evalue=6e-21, 39% identity hit'" ; "SPTR top hit: 'Q6FEY9 Putative acyl-CoA dehydrogenase. Acinetobacter sp. (strain ADP1)., evalue=6e-17, 33% identity hit'" ; "SPTR top hit: 'Q881B1 Acyl-CoA dehydrogenase family protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 93% identity hit'" ; "SPTR top hit: 'Q880W4 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 92% identity hit'" ; "SPTR top hit: 'Q82XZ7 RecQ; ATP-dependent DNA helicase (EC 3.6.1.-). Nitrosomonas europaea., evalue=0.0, 70% identity hit'" ; "SPTR top hit: 'Q880T0 ABC transporter, ATP-binding/permease protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 92% identity hit'" ; "SPTR top hit: 'Q880Q5 Multidrug efflux RND membrane fusion protein MexE. Pseudomonas syringae (pv. tomato)., evalue=0.0, 93% identity hit'" ; "SPTR top hit: 'Q880P9 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=5e-94, 83% identity hit'" ; "SPTR top hit: 'Q880P3 Sensory box histidine kinase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 82% identity hit'" ; "SPTR top hit: 'Q880P0 Lipoprotein, putative. Pseudomonas syringae (pv. tomato)., evalue=1e-46, 96% identity hit'" ; "SPTR top hit: 'Q88HF1 Cobalamin biosynthesis protein cobE, putative. Pseudomonas putida (strain KT2440)., evalue=1e-23, 51% identity hit'" ; "SPTR top hit: 'Q6D6W3 Putative membrane protein. Erwinia carotovora (subsp. atroseptica) (Pectobacterium atrosepticum)., evalue=2e-44, 46% identity hit'" ; "SPTR top hit: 'Q87UR5 Oxidoreductase, zinc-binding. Pseudomonas syringae (pv. tomato)., evalue=8e-57, 94% identity hit'" ; "SPTR top hit: 'Q8PIU6 Acriflavin resistance protein. Xanthomonas axonopodis (pv. citri)., evalue=2e-66, 86% identity hit'" ; "SPTR top hit: 'Q8PIU6 Acriflavin resistance protein. Xanthomonas axonopodis (pv. citri)., evalue=0.0, 60% identity hit'" ; "SPTR top hit: 'Q881K0 PAP2 superfamily protein. Pseudomonas syringae (pv. tomato)., evalue=2e-89, 56% identity hit'" ; "SPTR top hit: 'Q880B3 Peptidase, U32 family. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q87ZW8 Major facilitator family transporter. Pseudomonas syringae (pv. tomato)., evalue=0.0, 95% identity hit'" ; "SPTR top hit: 'Q87ZR8 Isocitrate dehydrogenase, NADP-dependent. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q87ZG9 D-isomer specific 2-hydroxyacid dehydrogenase family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-155, 90% identity hit'" ; "SPTR top hit: 'Q87ZG6 CDP-diacylglycerol--serine O-phosphatidyltransferase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 94% identity hit'" ; "SPTR top hit: 'Q87ZC4 Cytochrome b561, putative. Pseudomonas syringae (pv. tomato)., evalue=9e-87, 84% identity hit'" ; "SPTR top hit: 'Q87ZA9 Universal stress protein family. Pseudomonas syringae (pv. tomato)., evalue=2e-63, 82% identity hit'" ; "SPTR top hit: 'Q87UU2 Autotransporter, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 93% identity hit'" ; "SPTR top hit: 'Q87Z96 Glycosyl hydrolase, family 5. Pseudomonas syringae (pv. tomato)., evalue=0.0, 89% identity hit'" ; "SPTR top hit: 'Q87Z90 Transcriptional regulator, LysR family. Pseudomonas syringae (pv. tomato)., evalue=1e-154, 88% identity hit'" ; "SPTR top hit: 'Q9WWH9 Histidine protein kinase-response regulator hybrid protein CvgSY. Pseudomonas syringae (pv. syringae)., evalue=0.0, 99% identity hit'" ; "SPTR top hit: 'Q87Z12 Sulfate ABC transporter, periplasmic sulfate-binding protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 95% identity hit'" ; "SPTR top hit: 'Q87Z07 Cytochrome c-type biogenesis protein CcmE. Pseudomonas syringae (pv. tomato)., evalue=5e-69, 85% identity hit'" ; "SPTR top hit: 'Q884S7 Autotransporter, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 76% identity hit'" ; "SPTR top hit: 'Q884T9 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=9e-79, 80% identity hit'" ; "SPTR top hit: 'Q884X5 Flagellum-specific ATP synthase FliI. Pseudomonas syringae (pv. tomato)., evalue=0.0, 98% identity hit'" ; "SPTR top hit: 'Q885F6 Transcriptional regulator, LysR family. Pseudomonas syringae (pv. tomato)., evalue=1e-129, 95% identity hit'" ; "SPTR top hit: 'Q51509 Transducer (Chemotactic transducer PctA). Pseudomonas aeruginosa., evalue=0.0, 63% identity hit'" ; "SPTR top hit: 'Q98IX9 Probable transcriptional regulator. Rhizobium loti (Mesorhizobium loti)., evalue=9e-72, 46% identity hit'" ; "SPTR top hit: 'Q885J1 Threonine aldolase, low-specificity. Pseudomonas syringae (pv. tomato)., evalue=1e-175, 93% identity hit'" ; "SPTR top hit: 'Q885K2 Histidine ABC transporter, ATP-binding protein. Pseudomonas syringae (pv. tomato)., evalue=1e-138, 98% identity hit'" ; "SPTR top hit: 'Q885N1 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-55, 96% identity hit'" ; "SPTR top hit: 'Q885Q9 Phospho-2-dehydro-3-deoxyheptonate aldolase, class II. Pseudomonas syringae (pv. tomato)., evalue=0.0, 98% identity hit'" ; "SPTR top hit: 'Q885U2 GGDEF domain protein. Pseudomonas syringae (pv. tomato)., evalue=1e-165, 96% identity hit'" ; "SPTR top hit: 'Q885V1 NAD(P)H dehydrogenase, quinone family. Pseudomonas syringae (pv. tomato)., evalue=1e-110, 91% identity hit'" ; "SPTR top hit: 'Q87UX6 Membrane protein, putative. Pseudomonas syringae (pv. tomato)., evalue=1e-37, 87% identity hit'" ; "SPTR top hit: 'Q885W4 Cobalamin synthase (EC 2.-.-.-). Pseudomonas syringae (pv. tomato)., evalue=1e-118, 87% identity hit'" ; "SPTR top hit: 'Q885W9 Cobalamin biosynthesis protein CobC. Pseudomonas syringae (pv. tomato)., evalue=1e-172, 88% identity hit'" ; "SPTR top hit: 'Q87UX6 Membrane protein, putative. Pseudomonas syringae (pv. tomato)., evalue=2e-48, 68% identity hit'" ; "SPTR top hit: 'Q886C0 Ribonucleoside-diphosphate reductase, beta subunit. Pseudomonas syringae (pv. tomato)., evalue=7e-29, 83% identity hit'" ; "SPTR top hit: 'Q886G6 Transcriptional regulator, LuxR family. Pseudomonas syringae (pv. tomato)., evalue=4e-34, 89% identity hit'" ; "SPTR top hit: 'Q886K5 Mechanosensitive ion channel family protein. Pseudomonas syringae (pv. tomato)., evalue=5e-64, 91% identity hit'" ; "SPTR top hit: 'Q6J2J5 IS222 transposase protein orfA. Pseudomonas syringae (pv. maculicola)., evalue=6e-15, 87% identity hit'" ; "SPTR top hit: 'Q93TE4 Hypothetical protein. Pseudomonas syringae (pv. maculicola)., evalue=2e-10, 80% identity hit'" ; "SPTR top hit: 'Q87XT2 3-oxoacyl-(Acyl-carrier-protein) synthase III, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 94% identity hit'" ; "SPTR top hit: 'Q87XP4 Repressor protein c2, putative. Pseudomonas syringae (pv. tomato)., evalue=1e-115, 94% identity hit'" ; "SPTR top hit: 'Q87XK2 Sigma-54 dependent transcriptional regulator/response regulator. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q87XG7 Lipoprotein, putative. Pseudomonas syringae (pv. tomato)., evalue=3e-64, 90% identity hit'" ; "SPTR top hit: 'Q87XG6 Methyltransferase, putative. Pseudomonas syringae (pv. tomato)., evalue=1e-126, 92% identity hit'" ; "SPTR top hit: 'Q87XF1 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=3e-43, 98% identity hit'" ; "SPTR top hit: 'Q9I5J6 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (Uracil hydrolyase). Pseudomonas aeruginosa., evalue=7e-84, 66% identity hit'" ; "SPTR top hit: 'Q87X35 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-104, 93% identity hit'" ; "SPTR top hit: 'Q87WZ8 Sensory box histidine kinase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q87WX3 Hypothetical UPF0102 protein PSPTO4420. Pseudomonas syringae (pv. tomato)., evalue=2e-56, 83% identity hit'" ; "SPTR top hit: 'Q87WR3 Tat (Twin-arginine translocation) pathway signal sequence domain protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 94% identity hit'" ; "SPTR top hit: 'Q87XA1 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=3e-11, 22% identity hit'" ; "SPTR top hit: 'Q87WB1 Ferredoxin--NADP reductase. Pseudomonas syringae (pv. tomato)., evalue=1e-136, 93% identity hit'" ; "SPTR top hit: 'Q87W98 Membrane protein, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 94% identity hit'" ; "SPTR top hit: 'Q87W96 Conserved domain protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 97% identity hit'" ; "SPTR top hit: 'Q87W92 Histone deacetylase family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-171, 95% identity hit'" ; "SPTR top hit: 'Q9I6U1 Hypothetical protein. Pseudomonas aeruginosa., evalue=8e-14, 78% identity hit'" ; "SPTR top hit: 'Q88NU4 Serine O-acetyltransferase, putative. Pseudomonas putida (strain KT2440)., evalue=1e-68, 69% identity hit'" ; "SPTR top hit: 'Q87VS7 Thiol:disulfide interchange protein DsbD. Pseudomonas syringae (pv. tomato)., evalue=0.0, 90% identity hit'" ; "SPTR top hit: 'Q87VR7 Sensor histidine kinase/response regulator. Pseudomonas syringae (pv. tomato)., evalue=0.0, 93% identity hit'" ; "SPTR top hit: 'Q88AX1 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=5e-25, 53% identity hit'" ; "SPTR top hit: 'Q87VN5 Phosphate starvation-inducible protein PsiF. Pseudomonas syringae (pv. tomato)., evalue=1e-44, 91% identity hit'" ; "SPTR top hit: 'Q87VM6 Urease accessory protein UreF. Pseudomonas syringae (pv. tomato)., evalue=1e-115, 92% identity hit'" ; "SPTR top hit: 'Q889S1 NAD-dependent epimerase/dehydratase family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-161, 93% identity hit'" ; "SPTR top hit: 'Q877J9 ISPpu14, transposase Orf3. Pseudomonas putida (strain KT2440)., evalue=1e-119, 92% identity hit'" ; "SPTR top hit: 'Q9RBW2 Hypothetical protein. Pseudomonas syringae (pv. phaseolicola)., evalue=1e-21, 90% identity hit'" ; "SPTR top hit: 'Q9L6V8 Hypothetical protein. Pseudomonas syringae (pv. syringae)., evalue=2e-85, 96% identity hit'" ; "SPTR top hit: 'Q88A73 Conserved domain protein. Pseudomonas syringae (pv. tomato)., evalue=1e-28, 88% identity hit'" ; "SPTR top hit: 'Q88A84 Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone biosynthesis protein E). Pseudomonas syringae (pv. tomato)., evalue=0.0, 95% identity hit'" ; "SPTR top hit: 'Q88A85 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 88% identity hit'" ; "SPTR top hit: 'Q88AA2 Ser/Thr protein phosphatase family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-155, 94% identity hit'" ; "SPTR top hit: 'Q88AA7 Transcriptional repressor, LacI family. Pseudomonas syringae (pv. tomato)., evalue=1e-175, 91% identity hit'" ; "SPTR top hit: 'Q88AC0 Response regulator. Pseudomonas syringae (pv. tomato)., evalue=7e-61, 93% identity hit'" ; "SPTR top hit: 'Q88AC1 Nucleotidyltransferase, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 95% identity hit'" ; "SPTR top hit: 'Q88AH1 Transcriptional reguator, TetR family. Pseudomonas syringae (pv. tomato)., evalue=1e-112, 89% identity hit'" ; "SPTR top hit: 'Q87V95 NLP/P60 family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-113, 91% identity hit'" ; "SPTR top hit: 'Q88AL2 DNA-binding heavy metal response regulator. Pseudomonas syringae (pv. tomato)., evalue=1e-122, 99% identity hit'" ; "SPTR top hit: 'Q87UM6 Urocanate hydratase (EC 4.2.1.49) (Urocanase) (Imidazolonepropionate hydrolase). Pseudomonas syringae (pv. tomato)., evalue=0.0, 97% identity hit'" ; "SPTR top hit: 'Q87UJ6 Penicillin amidase family protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 94% identity hit'" ; "SPTR top hit: 'Q87UH0 Peptidase, M23/M37 family. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q87UD6 DnaJ domain protein. Pseudomonas syringae (pv. tomato)., evalue=1e-167, 86% identity hit'" ; "SPTR top hit: 'Q87UB4 Outer membrane porin, OprD family. Pseudomonas syringae (pv. tomato)., evalue=0.0, 95% identity hit'" ;  ; "SPTR top hit: 'Q88I98 ADP-ribosylglycohydrolase family protein. Pseudomonas putida (strain KT2440)., evalue=4e-93, 71% identity hit'" ; "SPTR top hit: 'Q87VB5 Potassium efflux system protein KefA, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 97% identity hit'" ; "SPTR top hit: 'Q87U29 Phosphate ABC transporter, permease protein, putative. Pseudomonas syringae (pv. tomato)., evalue=0.0, 92% identity hit'" ; "SPTR top hit: 'Q87U27 Major facilitator family transporter. Pseudomonas syringae (pv. tomato)., evalue=0.0, 97% identity hit'" ; "SPTR top hit: 'Q87U16 Aspartate ammonia-lyase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 98% identity hit'" ; "SPTR top hit: 'Q87U10 Transcriptional regulator, putative. Pseudomonas syringae (pv. tomato)., evalue=8e-93, 81% identity hit'" ; "SPTR top hit: 'Q87U02 Transcriptional regulator, RpiR family. Pseudomonas syringae (pv. tomato)., evalue=1e-155, 98% identity hit'" ; "SPTR top hit: 'Q87TZ6 Pyridoxal kinase. Pseudomonas syringae (pv. tomato)., evalue=1e-159, 96% identity hit'" ; "SPTR top hit: 'Q87TZ4 Cobalamin synthesis protein/P47K family protein. Pseudomonas syringae (pv. tomato)., evalue=1e-161, 84% identity hit'" ; "SPTR top hit: 'Q87TX2 Acyltransferase family protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 83% identity hit'" ;  ; "SPTR top hit: 'Q882H6 Response regulator. Pseudomonas syringae (pv. tomato)., evalue=4e-54, 82% identity hit'" ; "SPTR top hit: 'Q88B74 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-97, 96% identity hit'" ; "SPTR top hit: 'Q87X60 ISPs1, transposase OrfB. Pseudomonas syringae (pv. tomato)., evalue=1e-18, 61% identity hit'" ;  ;  ;  ; "SPTR top hit: 'Q88AQ5 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-27, 80% identity hit'" ;  ;  ;  ;  ; "SPTR top hit: 'Q87U55 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-11, 96% identity hit'" ; "SPTR top hit: 'Q8KRZ2 Putative tyrosine recombinase xerC. Pseudomonas syringae., evalue=3e-44, 85% identity hit'" ; "SPTR top hit: 'Q52537 AvrPmaA1 protein. Pseudomonas syringae., evalue=3e-65, 59% identity hit'" ; "SPTR top hit: 'Q888K3 Integrase/recombinase XerC, putative. Pseudomonas syringae (pv. tomato)., evalue=7e-83, 93% identity hit'" ; "SPTR top hit: 'Q6VE99 Orf28. Pseudomonas syringae (pv. syringae)., evalue=2e-55, 83% identity hit'" ; "SPTR top hit: 'Q93TE4 Hypothetical protein. Pseudomonas syringae (pv. maculicola)., evalue=2e-44, 65% identity hit'" ; "SPTR top hit: 'Q877P1 ISPpu14, transposase Orf1. Pseudomonas putida (strain KT2440)., evalue=2e-21, 68% identity hit'" ; "SPTR top hit: 'Q886X3 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=4e-09, 70% identity hit'" ; "SPTR top hit: 'Q888U3 Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase). Pseudomonas syringae (pv. tomato)., evalue=1e-106, 92% identity hit'" ; "SPTR top hit: 'Q87ZD8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=9e-09, 69% identity hit'" ;  ;  ; "SPTR top hit: 'Q87U55 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-11, 96% identity hit'" ; "SPTR top hit: 'Q888G9 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-08, 71% identity hit'" ;  ; "SPTR top hit: 'Q87UI5 Conserved domain protein. Pseudomonas syringae (pv. tomato)., evalue=4e-10, 62% identity hit'" ;  ;  ;  ;  ;  ;  ;  ; "SPTR top hit: 'Q8FL04 Hypothetical protein c0222. Escherichia coli O6., evalue=6e-50, 39% identity hit'" ;  ; "SPTR top hit: 'Q8FD85 Hypothetical protein c3928. Escherichia coli O6., evalue=1e-07, 83% identity hit'" ;  ; "SPTR top hit: 'Q9X063 Hypothetical protein. Thermotoga maritima., evalue=2e-18, 25% identity hit'" ; "SPTR top hit: 'Q87WE2 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-41, 98% identity hit'" ; "SPTR top hit: 'Q87WD4 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-40, 98% identity hit'" ;  ; "SPTR top hit: 'Q6C5E6 Similarity. Yarrowia lipolytica CLIB99., evalue=3e-06, 34% identity hit'" ; "SPTR top hit: 'Q6X3S1 Putative DNA binding protein. Pseudomonas aeruginosa., evalue=1e-07, 36% identity hit'" ;  ;  ;  ; "SPTR top hit: 'Q88FU5 Site-specific recombinase, phage integrase family. Pseudomonas putida (strain KT2440)., evalue=3e-20, 49% identity hit'" ;  ; "SPTR top hit: 'Q87YA8 Glyoxalase, putative. Pseudomonas syringae (pv. tomato)., evalue=3e-62, 90% identity hit'" ; "SPTR top hit: 'Q9HZB8 Hypothetical protein. Pseudomonas aeruginosa., evalue=7e-50, 41% identity hit'" ; "SPTR top hit: 'Q87YM8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=7e-26, 68% identity hit'" ; "SPTR top hit: 'Q8FKA6 Hypothetical protein c0552. Escherichia coli O6., evalue=2e-46, 31% identity hit'" ; "SPTR top hit: 'Q7PC42 Putative type III effector HolPtoACPsy. Pseudomonas syringae pv. syringae B728a., evalue=0.0, 100% identity hit'" ;  ; "SPTR top hit: 'Q884P6 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-162, 88% identity hit'" ; "SPTR top hit: 'Q842M6 RulA. Pseudomonas cichorii., evalue=7e-08, 64% identity hit'" ; "SPTR top hit: 'Q888K3 Integrase/recombinase XerC, putative. Pseudomonas syringae (pv. tomato)., evalue=1e-130, 94% identity hit'" ;  ; "SPTR top hit: 'Q884F0 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-56, 95% identity hit'" ;  ;  ;  ; "SPTR top hit: 'Q883M4 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=3e-44, 75% identity hit'" ;  ; "SPTR top hit: 'Q882A2 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=7e-09, 87% identity hit'" ;  ; "SPTR top hit: 'Q7BD68 Hypothetical protein. Pseudomonas syringae (pv. syringae)., evalue=2e-37, 100% identity hit'" ; "SPTR top hit: 'Q6J2J4 IS222 transposase protein orfB. Pseudomonas syringae (pv. maculicola)., evalue=4e-08, 89% identity hit'" ; "SPTR top hit: 'Q87VE8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=0.0, 87% identity hit'" ; "SPTR top hit: 'Q88EN6 Hypothetical protein. Pseudomonas putida (strain KT2440)., evalue=4e-26, 52% identity hit'" ;  ; "SPTR top hit: 'Q8YGE1 Putative regulatory protein (EC 3.4.24.-). Brucella melitensis., evalue=2e-23, 33% identity hit'" ; "SPTR top hit: 'Q87Y70 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-23, 49% identity hit'" ;  ; "SPTR top hit: 'Q884J6 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-08, 61% identity hit'" ;  ; "SPTR top hit: 'Q88B27 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-09, 36% identity hit'" ; "SPTR top hit: 'Q9HYK5 Hypothetical protein. Pseudomonas aeruginosa., evalue=1e-13, 44% identity hit'" ;  ; "SPTR top hit: 'Q7P0Q1 Probable glycosyltransferase (EC 2.4.1.-). Chromobacterium violaceum., evalue=1e-122, 55% identity hit'" ; "SPTR top hit: 'Q87U55 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-11, 96% identity hit'" ; "SPTR top hit: 'Q87VF3 Lipid A export ATP-binding/permease protein msbA. Pseudomonas syringae (pv. tomato)., evalue=0.0, 96% identity hit'" ; "SPTR top hit: 'Q87ZJ3 Lipoprotein, putative. Pseudomonas syringae (pv. tomato)., evalue=2e-48, 85% identity hit'" ;  ; "SPTR top hit: 'Q87Z76 Maleylacetoacetate isomerase. Pseudomonas syringae (pv. tomato)., evalue=5e-09, 65% identity hit'" ;  ;  ; "SPTR top hit: 'Q883S9 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-06, 72% identity hit'" ; "SPTR top hit: 'Q885F8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-13, 60% identity hit'" ; "SPTR top hit: 'Q885I4 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-40, 87% identity hit'" ;  ; "SPTR top hit: 'Q8CKV7 Hypothetical. Yersinia pestis., evalue=1e-44, 50% identity hit'" ; "SPTR top hit: 'Q885V6 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=1e-22, 87% identity hit'" ;  ;  ;  ;  ; "SPTR top hit: 'Q87X48 Insecticidal toxin protein, putative. Pseudomonas syringae (pv. tomato)., evalue=3e-08, 92% identity hit'" ; "SPTR top hit: 'Q87WT5 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=2e-08, 67% identity hit'" ; "SPTR top hit: 'Q8FD88 Hypothetical protein c3919. Escherichia coli O6., evalue=1e-115, 39% identity hit'" ; "SPTR top hit: 'Q87VF9 3-deoxy-D-manno-octulosonic-acid transferase. Pseudomonas syringae (pv. tomato)., evalue=0.0, 90% identity hit'" ; "SPTR top hit: 'Q8FD86 Hypothetical protein c3925. Escherichia coli O6., evalue=3e-74, 36% identity hit'" ; "SPTR top hit: 'P95577 Protein-export membrane protein secG. Pseudomonas syringae (pv. syringae)., evalue=1e-64, 100% identity hit'" ; "SPTR top hit: 'Q8FLC6 Putative glutamate dehydrogenase. Escherichia coli O6., evalue=1e-150, 47% identity hit'" ;  ;  ;  ; "SPTR top hit: 'Q8FCZ9 Hypothetical protein c4084. Escherichia coli O6., evalue=6e-56, 48% identity hit'" ; "SPTR top hit: 'Q87U55 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-11, 96% identity hit'" ;  ; "SPTR top hit: 'Q8FDG2 Hypothetical protein c3820. Escherichia coli O6., evalue=3e-76, 57% identity hit'" ;  ; "SPTR top hit: 'Q882N9 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=6e-07, 76% identity hit'" ; "SPTR top hit: 'Q88AJ8 Hypothetical protein. Pseudomonas syringae (pv. tomato)., evalue=5e-11, 97% identity hit'" ;  ;  ;  ;  ; "SPTR t