LOCUS NC_004129 7074893 bp dna circular UNK DEFINITION Pseudomonas fluorescens Pf-5, Chromosome, complete sequence. ACCESSION NC_004129 COMMENT Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. Class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known). Class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene. Class 4: Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences. COMMENT Subcellular localization confidence: Class 1: Subcellular localization experimentally demonstrated in same species. Class 2: Subcellular localization of highly similar gene experimentally demonstrated in another organism. BLAST expect value of 10e-10 for query within 80-120% of subject length. Class 3: Subcellular localization computationally predicted by PSORTb V2.0. FEATURES Location/Qualifiers source 1..7074893 /db_xref="taxon:220664" /mol_type="genomic DNA" /strain="Pf-5" /organism="Pseudomonas fluorescens" gene 101..1642 /locus_tag="PFL_0001" /db_xref="GeneID:3480601" /name="dnaA" CDS 101..1642 /db_xref="GI:70733514" /db_xref="GeneID:3480601" /protein_id="YP_257153" /localization_and_confidence="Cytoplasmic, Class 3" /product="chromosomal replication initiation protein" /translation="MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPN RFVLDWVNEKYLGRVLELLDEHGNGMAPVLSLLIGSKRSSAPRAAPNAPLAAAASQAL QAAAANAAPAAAPAPAPAPTSAPAKKAAAQKAAEVSEEPSRDSFDPMAGASSQQAPVR AEQRTVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHGYNPLFLYG GVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVD ALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGW GLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAH SHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVA RPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKNLL RTLTT" gene 1681..2784 /locus_tag="PFL_0002" /db_xref="GeneID:3480602" /name="dnaN" CDS 1681..2784 /db_xref="GI:70733515" /db_xref="GeneID:3480602" /protein_id="YP_257154" /localization_and_confidence="Cytoplasmic, Class 3" /product="DNA polymerase III subunit beta" /translation="MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSL TGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLVVKAG RSRFTLSTLPANDFPTVEEGPGSLTCQLEQSRLRRLIERTSFAMAQQDVRYYLNGMLL EVSAGIIRAVATDGHRLAMCSMQADIGQPDRHQVIVPRKGILELARLLTEPDGNVSIV LGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSN EKYRGIRLQLANGQLKIQANNPEQEEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTT EQVRLILSDSNSSALVQESDNDDSAYVVMPMRL" /EC_number="2.7.7.7" gene 2805..3908 /locus_tag="PFL_0003" /db_xref="GeneID:3480603" /name="recF" CDS 2805..3908 /db_xref="GI:70733516" /db_xref="GeneID:3480603" /protein_id="YP_257155" /localization_and_confidence="Cytoplasmic, Class 3" /product="recombination protein F" /translation="MSLSRVSVTAVRNLHPVTFSPSPRINLLYGANGSGKTSVLEAIH LLGLARSFRSARLLPVIQYEQLACTVFGQVELAQGGHSSLGISRDRQGEFQIRIDGQN ARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALR QRNSWLRHGTLDAASQAAWDRELCQASAEIDEYRRAYIKALKPVFERTLGELLQLEGL TLSYYRGWDKDRELSEVLATALHRDQQMGHTQAGPQRADLRLRLGGHNAADILSRGQQ KLVVCALRIAQGHLVSQARRGQCIYLVDDLPSELDEQHRRALCRLLEDLRCQVFITCV DHELLREGWQTETPVALFHVEQGRITQTHDHRE" gene 3913..6330 /locus_tag="PFL_0004" /db_xref="GeneID:3480604" /name="gyrB" CDS 3913..6330 /db_xref="GI:70733517" /db_xref="GeneID:3480604" /protein_id="YP_257156" /localization_and_confidence="Cytoplasmic, Class 3" /product="DNA gyrase subunit B" /translation="MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFE VVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHA GGKFDDNSYKVSGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHGVPQERMKIVG DSETTGTQIHFKPSAETFKNIHFSWDVLAKRIRELSFLNSGVGIVLKDERSGKEELFK YEGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQ RDGGTHLVGFRSALTRNLNNYIEQEGLAKKHKVATTGDDAREGLTAIISVKVPDPKFS SQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREM TRRKGALDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRKTQAILPLKGK ILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIR TLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEDYMTQSALEDAS LHLNEEAPGISGEALERLVNDFRMVMKTLKRLSRLYPQELTEHFIYLPAVTMEQLSDH AAMQDWLAKYDARLRTSEKSGLVYKASLREDRERNVWLPEVELISHGLSNYVTFNRDF FGSNDYKTVVSLGAQLSTLLDEGAYVQRGERKKAVTEFKEALDWLMAESTKRHTIQRY KGLGEMNPDQLWETTMDPSMRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNAL AVSNLDF" /EC_number="5.99.1.3" gene 6669..7193 /locus_tag="PFL_0005" /db_xref="GeneID:3480605" CDS 6669..7193 /db_xref="GI:70733518" /db_xref="GeneID:3480605" /protein_id="YP_257157" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MDTSTAQFHKIIFKLTVDADGYPPVEYESMWGIQRGADVYQLDN TPYYLYGVSKGDWVLTRAEAHERIATGVVRQSGHSTLRVFAERESERSEIVQYLRSLG ARCTVTRGLSLFTVDIAPEVSFCAIDQYLASISDDQHVAYEDACLQHEAIEPARLSEC SSLASLECVTWRDH" gene 7345..7830 /locus_tag="PFL_0006" /db_xref="GeneID:3480606" CDS 7345..7830 /db_xref="GI:70733519" /db_xref="GeneID:3480606" /protein_id="YP_257158" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MDDENQEISIRVVAGQNSRGPVYEPLHVRRIDEDSYEILYSPGL ALNLAKGDIISIKDPQAPAVVLKRGGNFCIHIYSDHIPEEHIMALAADVASELGGMLD GRYKGNLTLSVPARSGMDNIALFFNRFRETTGSEWYYANIYKNLDDTDDETLLDWWLA L" gene 7812..8147 /locus_tag="PFL_0007" /db_xref="GeneID:3480607" CDS 7812..8147 /db_xref="GI:70733520" /db_xref="GeneID:3480607" /protein_id="YP_257159" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MVAGPMNERQQLICERYDLAPQAPEPMIALAIGSLAQSPIYGTR VELPENGTVSWFIHCGEHSTAVDFYQPLCAEHLLELLPEVIDYLYLPSGTRFIIDRAG YEDVWRDPE" gene complement(8175..8903) /locus_tag="PFL_0008" /db_xref="GeneID:3480608" CDS complement(8175..8903) /db_xref="GI:70733521" /db_xref="GeneID:3480608" /protein_id="YP_257160" /localization_and_confidence="Cytoplasmic, Class 3" /product="DNA-binding response regulator" /translation="MRVAILDDEPAELARVEQTLREIPGPGEQPWTLHSFERGEDLLR QLRRETFDLLILDWQVPDLSGLSLLRWTREHMDSPPAAIMLTSRDAESDIVQALNTGA DDYLSKPFRPNELKARVNAVLRRHGLQRNHSEEVQSFNDLSFDDAELTVTRAGAPISL TEREYRLARCLFANLGRPLSREYLYERFWTHEEIVSSRPLDTHIYRLRNKLGLTADRG WQLLTIYGYGYRLESVASPEEQGS" gene 9819..10817 /locus_tag="PFL_0009" /db_xref="GeneID:3480609" CDS 9819..10817 /db_xref="GI:70733522" /db_xref="GeneID:3480609" /protein_id="YP_257161" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MNDLCPFPSTGRPQVARVALLLAGLILPLCAAQAAAPRLPYIDD NQQCRGQPLPATVEHLTGEAWKLDAKGREVLLQEGMSIDEKEGVRTSPSAFVSLSLGD GSRVVLPSSSQVTLQLNNQYAIPQVVLEQGQIESYVIKRTSDHDRFQIVTPVGVLGVR GTHFRVRNDDQQSLVEVLNGQVAVNREEDAPQPGPRRPRQRPVDKPAGPVPGEVQVMA RQGLRIQKQGELKPVELLSAPRLLGQAGQTGALPVWQLILQPLPGASRYRAQVATDKD FLNIKQEQFSSTPQVNFTGLQAFFYHVRLSAFDEHGLEGETGVYDIFYYPRTTRVE" gene 10836..13154 /locus_tag="PFL_0010" /db_xref="GeneID:3480610" CDS 10836..13154 /db_xref="GI:70733523" /db_xref="GeneID:3480610" /protein_id="YP_257162" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="CHASE domain/sensory box histidine kinase" /translation="MSVWRRRAEGREPTQAQRLFRGLVREWLWVSLILLPLTAVLSLS HGLALNNLFYDNLRRFTPLPVDPRILLVTIDDYSLQQLGRWPWPRAIHGQLLDRLSAA EAKGVLFDVILSEPGSTVENDTRLAAALCRAGNVFLPVLRQGVARYGQDIEEIPPVPL LRNCARGLGHINAEADADGTVRSVYLREGPMLAPRAQLTWLLYQLTEAEPAFPHMPGP GEPRVAQGWLRSNPVRIPFISADAGFPSVPYVSVLRGEVPPELLRDRLILVGSTAPGL GDRYVTPQSGSQGTTPGVEIQANLLNGLLQHRSVVALGQWSGMLLSMALTAVLLGLLL WRPRHALWITLGCMGLGLAGSVLMLRLGYWWSPVASLLGMLLAYLIWNWRRLSVILAY FGWELARLDSEPKVLPERRRSQAPAGDVLQGQIVALEQALSRTRDTRRFIADGLEYLP VATLISDPDGKILLANRNAREVFAHSLVGEGLIAQLAALGYPGLTEPALYPRLEQLPA VEFRDVQQRSLRMELAPLLPVDSDTAIGWLLSLTDLSVERDAEQQRSVLLRFLSHDLR APHSAILALLDVQRHQPATPRQVYGQIEQQVRRALALTEAFVQLAKAESEAYQFEPSM FAMLVLDAFDQATTLAQLKDIHLEHDLDDEAEGLVLADQSLLTRALFNLLENAIKYSP VESRVSVRVSCTPGWLRCEISDEGRGIDAADLPQLFGQYQRFASAKGIDGLGLGLSMV KAVVDRHQGRISCQSVVGRGSCFILELPLLEE" gene complement(13335..14105) /locus_tag="PFL_0011" /db_xref="GeneID:3480611" CDS complement(13335..14105) /db_xref="GI:70733524" /db_xref="GeneID:3480611" /protein_id="YP_257163" /localization_and_confidence="Unknown, Class 3" /product="acylhomoserine lactone synthase HdtS, putative" /translation="MSILQAIRTFFFYLLLGTSSLLWCSLSFFIAPFLPFKARYRFIN VYWCRCALWLTKVFLNIRVEVKGAENVPERPCVIVSNHQSTWETFFLSAYFEPLSQVL KRELLYVPFFGWAMAMLRPIAIDRDNPKAALKQVASKGDELLKDNVWVLIFPEGTRVP HGQIGKFSRSGSALAVNADLPVLPVAHNAGKFWPKTGWAKRPGTITVTIGAPMYAEGS GPRAIAELNDRVAAWNEQAQRDMGSLPPLATSTDKVAV" /EC_number="3.2.2.20" gene complement(14189..14722) /locus_tag="PFL_0012" /db_xref="GeneID:3480612" CDS complement(14189..14722) /db_xref="GI:70733525" /db_xref="GeneID:3480612" /protein_id="YP_257164" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MKLLILDRDGVINHDSDAYIKSVQEWIPLPGAIEAIAQLSKAGW TVAIATNQSGIARGYYDLATLDAMHARLRELVAEQGGEVGLIVYCPHGPDEGCACRKP KPGMLRTIAEHYQAELTGLWFVGDSLGDLEAAKAVDSQPVLVKTGKGEKTLGKTLPVG TLIFDDLAAVAAELIHN" gene complement(14740..16794) /locus_tag="PFL_0013" /db_xref="GeneID:3480613" /name="glyS" CDS complement(14740..16794) /db_xref="GI:70733526" /db_xref="GeneID:3480613" /protein_id="YP_257165" /localization_and_confidence="Cytoplasmic, Class 3" /product="glycyl-tRNA synthetase beta subunit" /translation="MSAQDFLVELGTEELPPKALNTLAEAFLAGIEKGLQSAGLSFQA KHVYAAPRRLAVLITQLATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGVEL SEIDQSGPKLRYSQSIKGKPTASLLPTIVEDSLNDLPIPKRMRWAARKEEFVRPTQWL VMLLGDEVIDCTILAQKAGRDSRGHRFHHPQSVRITAPANYLADLRAAYVLADANERR ELISKRTAELATLQEGTAIVPADLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTM QDNQKYFCLLDVDGKLLPRFITVANIESKDPRQIIEGNEKVVRPRLTDAEFFFKQDKK QKLEDFNLRLQNVVFQEKLGSVYDKAERISKLAAFIAPRIGGDAQRAARAGLLSKCDL ATEMVGEFPEMQGIAGYYYALNDGEPEDVALALNEQYMPRGAGAELPSTVTGAAVAIA DKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKKFDLDLNDAVAFAVSAFGS KVKAAGLADQVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQAVQAFR KLPEAAALAAVNKRVSNLLSKIEGNVPTTIEAKYFDNANEFSLYSAIQQADQAVQPMA AARQYSETLARLAALREPVDAFFEAVMVNAEDAKVRANRYALLARLRGLFLGVADISV LS" /EC_number="6.1.1.14" gene complement(16791..17744) /locus_tag="PFL_0014" /db_xref="GeneID:3480614" /name="glyQ" CDS complement(16791..17744) /db_xref="GI:70733527" /db_xref="GeneID:3480614" /protein_id="YP_257166" /localization_and_confidence="Cytoplasmic, Class 3" /product="glycyl-tRNA synthetase alpha subunit" /translation="MSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHT ATFLRAIGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLG SLKHVGLDPLVHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGIECYP VTGEITYGLERLAMYLQGVDSVYDLVWADGPFGKVTYGDVFHQNEVEQSTYNFEHANV EKLFELFDFYESEAKRLIELDQPLPLPSYEMVLKASHTFNLLDARRAISVTARQQYIL RVRTLARSVAQAYLLARAKLGFPMATPDLRDEVLAKLEAAQ" /EC_number="6.1.1.14" gene 17826..18389 /locus_tag="PFL_0015" /db_xref="GeneID:3480615" /name="tag" CDS 17826..18389 /db_xref="GI:70733528" /db_xref="GeneID:3480615" /protein_id="YP_257167" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="DNA-3-methyladenine glycosylase I" /translation="MPRCFWCSEDPLYMAYHDQEWGVPLRDGQRLFELLLLEGFQAGL SWITVLKKREHYRQVLFGFDVQRVAQMSDAEIDDLMQDPGIIRNRLKLNAARRNAQAW LELEDPVAFLWAFVGGVPKINHFNDRSEVPAVTPEAEAMSRGLRKAGFTFVGPTICYA LMQASGMVMDHTLDCDRYAILADARLE" /EC_number="3.2.2.20" gene 18432..19319 /locus_tag="PFL_0016" /db_xref="GeneID:3480616" CDS 18432..19319 /db_xref="GI:70733529" /db_xref="GeneID:3480616" /protein_id="YP_257168" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="lipid A biosynthesis lauroyl acyltransferase" /translation="MDKFKGALLVGALRLFALLPWRAVQAVGAAIGWIMWKTPNRSRE VVRINLAKCFPQMDPAERERLVGQSLKDIGKSLTESACAWIWPAERSIALVREVEGLE VLKDALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQL GNRVAASTKEGILSVIKEVRKGGAVGIPADPEPAESAGIFVPFFATQALTSKFVPNML AGGKAVGVFLHALRLPDGSGYKVILEAAPEDMYSTDTETSCAAMSKVVERYVGAYPSQ YMWSMKRFKKRPPGEARWY" gene 19392..19631 /locus_tag="PFL_0017" /db_xref="GeneID:3480617" CDS 19392..19631 /db_xref="GI:70733530" /db_xref="GeneID:3480617" /protein_id="YP_257169" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MSDHRKSFRIKISHESIGECLGQTRNLSASGVYVQSPALARLPK GAVVYGQVQGLPVTAPRVRMEVVQVDAEGIALRYL" gene complement(19803..20120) /locus_tag="PFL_0018" /db_xref="GeneID:3480618" CDS complement(19803..20120) /db_xref="GI:70733531" /db_xref="GeneID:3480618" /protein_id="YP_257170" /localization_and_confidence="Cytoplasmic, Class 3" /product="TPR domain protein" /translation="MLESLEKMLAKGVDNALLRFGLGKGYLDQGDFAKAAEHLQRCVA FDPKYSAAWKLLGKACQGQGDLPAARQAWEQGLEAARGHGDKQAEKEMTVFLKKLDRQ SQG" gene complement(20245..21618) /locus_tag="PFL_0019" /db_xref="GeneID:3480619" CDS complement(20245..21618) /db_xref="GI:70733532" /db_xref="GeneID:3480619" /protein_id="YP_257171" /localization_and_confidence="Cytoplasmic, Class 3" /product="potassium uptake protein TrkA" /translation="MKIIILGAGQVGGTLAEHLASEANDITVVDTDGERLRDLGDRLD IRTVQGRASFPTVLRQAGADDADMLVAVTNSDETNMVACQVAHTLFHTPTKIARVREA AYLTRAGLFDNDAIPVDVLISPEQVVTNYIKRLIEHPGALQVIDFAEGKAQLVAVKAY YGGPLVGQQLRQLREHMPNVDTRVAAIFRRDRPIMPKGDTVIEADDEVFFIAAKAHIR AVMSEMRRLEESYKRIVIAGGGQIGERLAEAIESRYQVKIIEMNPARCRYLSDTLDST VVLQGSASDRDLLLEENIADADIFLALTNDDEANIMSSLLAKRLGAKKVMTIINNPAY VDLIQGGDIDIAISPQLATIGTLLAHVRRGDIVSVHSLRRGAAEAIEAIAHGDAKSSK VIGRAIENIGLPPGTTIGAIIRDEEVLIAHDDTVIEAGDHVILFLVDKKHIRDVEKLF HVGLSFF" gene complement(21641..22966) /locus_tag="PFL_0020" /db_xref="GeneID:3480620" /name="sun" CDS complement(21641..22966) /db_xref="GI:70733533" /db_xref="GeneID:3480620" /protein_id="YP_257172" /localization_and_confidence="Cytoplasmic, Class 3" /product="sun protein" /translation="MNPRLAAAKALTAVLNGKASLNSSLPIQLDKVEARDRGFTQDLA FGTARWQPRLSALAAKLLQKPFKAADADVEALLLVGLYQLLYARVPAHAAIGETVGCA DKLKKPWAKALLNAVLRRAQRESETLLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEA ICAANNAHPPMILRVNRRHHSRDAYLKLLSEAGVAAKACVYSQDGIVLDEALDVRSLP GFAEGWISVQDEAAQLAAELLELAPGQRVLDACCAPGGKTCHILEVQPALAGVVAVDL EAKRLVRVRENLDRLGLDAQLIAADGRDTQAWWDGKPFQRILLDAPCSATGVIRRHPD IKLTRQPEDIAALAQLQGELLDAMWQALEVGGILLYATCSTLPTENTEVIEAFLARTP GARELDIGGQLGQPAAGLKQPHGRQLLAQEGGHDGFYYAKLIKIAAARG" /EC_number="2.1.1.-" gene complement(22963..23922) /locus_tag="PFL_0021" /db_xref="GeneID:3480621" /name="fmt" CDS complement(22963..23922) /db_xref="GI:70733534" /db_xref="GeneID:3480621" /protein_id="YP_257173" /localization_and_confidence="Unknown, Class 3" /product="methionyl-tRNA formyltransferase" /translation="MTEPLRIVFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAGRG QKLMPSPVKQLALENDIPVLQPPTLRNAEAQAELAALKPDLMVVVAYGLILPQAVLDI PRLGCINSHASLLPRWRGAAPIQRAVQAGDAQSGVTVMRMEAGLDTGPMLLKVSTPIS AEDTGGSLHDRLAEMGPPAVLQAIEGLAAGTLEGEVQDDSLATYAHKLNKDEARIDWS RPAVELERLVRAFNPWPICHSSLNGEALKVLAATLAEGKGAPGEILGASKDGLIVACG EQALCLTRLQLPGGKALNFSDLFNSRREKFAIGTVLGQTADAQ" /EC_number="2.1.2.9" gene complement(23992..24633) /locus_tag="PFL_0022" /db_xref="GeneID:3480622" /name="def" CDS complement(23992..24633) /db_xref="GI:70733535" /db_xref="GeneID:3480622" /protein_id="YP_257174" /localization_and_confidence="Cytoplasmic, Class 3" /product="peptide deformylase" /translation="MCVRVKRQSLHGSLHPRARFAPAAQVQNLRGRRLRPYFTRVAIT LMAILNILEFPDPRLRTIAKPVAVVDDEVRQLVDDMFETMYEAPGIGLAATQVNVHKR VVVMDLSEDRSEPRVFINPEFEALTDEMDQYQEGCLSVPGFYENVDRPQRVKIKALDR DGQPYELIAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIKKKLEKQHRQQA" /EC_number="3.5.1.88" gene 24601..25662 /locus_tag="PFL_0023" /db_xref="GeneID:3480623" CDS 24601..25662 /db_xref="GI:70733536" /db_xref="GeneID:3480623" /protein_id="YP_257175" /localization_and_confidence="Unknown, Class 3" /product="LysM domain protein" /translation="MQALAFHANAHNKGIQPMRKSLFALLLAGWTAIGQAQVQLRDSY PQHYRVQPGDTLWSVASLYLQQPWQWRELWPAGFAGQIFPGDRLQLVRNDGPPRLQLE RPAAPPTVKLAPQARRLPPAPIPSIPLQAISSFLLDNRIVDQPGALERAPYIVAGEGE RVLGGMGDRLFARGRLDPEQPVYELFRQGKVYRDPLSQELLGVNADAIGSARVVASEG DLATLALQSSNQEVRLGDRLLAADTSGLPGSFSPSAPQRPVEGLIIDVPRGVTQIGAL DVVTLNRGRRDGLLEGNVLAVIKTGETVRDRQTGEPLKIPDEAAGWLMVFRSYDRLSY GLVLKATRSLAVLDKVRNP" gene 25762..26856 /locus_tag="PFL_0024" /db_xref="GeneID:3480624" /name="dprA" CDS 25762..26856 /db_xref="GI:70733537" /db_xref="GeneID:3480624" /protein_id="YP_257176" /localization_and_confidence="Unknown, Class 3" /product="smf protein" /translation="MSGSISPAELEARLRLHVLPELGPMRFQRLLQAFGCASKALRAP ASAWRSLDLPPACSEARRSPQVRDGARRALAWIDSQAQHLLMWDQPGYPPLLAQLEDA PPLLFVAGDPSILERPQLAMVGSRRASRPGLDTAGAFSRSLARAGFVITSGLALGIDG AAHQAALDVGGRTVGVLGTGLENFYPQRHRALARAMIDQGSAVVSEFPLDTPARAEHF PRRNRIISGLALGVLVVEASVASGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLI RDGAVLVESVQHILETLAGWQNLPPSASLPTAACTHPLLALLHAAPHSSEALASASGW PLPRVLAALTELEIEGRAVDENGRWYARLS" gene 26911..27468 /locus_tag="PFL_0025" /db_xref="GeneID:3480625" CDS 26911..27468 /db_xref="GI:70733538" /db_xref="GeneID:3480625" /protein_id="YP_257177" /localization_and_confidence="Unknown, Class 3" /product="Sua5/YciO/YrdC/YwlC family protein" /translation="MVSSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLL AIKSRSVDKGLILIADNIHQFDFLFEDFPDTWIDRMSSTWPGPNTWLVPHQNLLPEWV TGVHDTVALRVSDHPLVRELCSLVGPLISTSANPQGRPAARTRLRIEQYFRGQLDLVL SGSLGGRKNPSLIRDLATGKVVRPS" gene complement(27533..28510) /locus_tag="PFL_0026" /db_xref="GeneID:3480626" /name="qor" CDS complement(27533..28510) /db_xref="GI:70733539" /db_xref="GeneID:3480626" /protein_id="YP_257178" /localization_and_confidence="Unknown, Class 3" /product="quinone oxidoreductase" /translation="MAKRIQFRAHGGPEVLEYVDYQPAEPGPQQVRVSNKAIGLNFID TYFRSGLYAPPALPSGLGAEGAGVVEAVGSAVTRFKVGDRVAYGSGPLGAYSDVHVLP EANLVRLPDAISFEQAAGVMLKGLTVQYLLRQTYELQGGETVLFHAAAGGVGSLACQW AKALGVKLIGTVSSPEKAAIAKALGAWETIDYSHEDVARRVLELTGGKKCPVVYDGVG KDTWLTSLDCLAPRGLMVSFGNASGAVDGVNLGILSAKGSLYVTRPTLASYANNAENL QRMADDLFGMIASGKLKIEIGQRFALVDAAKAHIELSARRTTGSTVLLP" /EC_number="1.6.5.5" gene 28678..29595 /locus_tag="PFL_0027" /db_xref="GeneID:3480627" /name="hemF" CDS 28678..29595 /db_xref="GI:70733540" /db_xref="GeneID:3480627" /protein_id="YP_257179" /localization_and_confidence="Unknown, Class 3" /product="coproporphyrinogen III oxidase" /translation="MTTRTEAVKAYLLDLQDRICAALETEDGGARFIEDAWTRPAGGG GRTRVIGDGAVIEKGGVNFSHVFGSGLPPSASAHRPELAGRGFEALGVSLVIHPHNPH VPTSHANVRFFIAEKEGEEPVWWFGGGFDLTPYYGNIDDCVHWHRVAERACAPFGADV YPRYKAWCDSYFHIKHRNEPRGIGGLFFDDLNEWDFDTSFAFMRAIGDAYIEAYLPIV QRRKAAAYTAQQREFQEFRRGRYVEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWG YDWKAEPGSEEARLTEYFLQDRDWLAASN" /EC_number="1.3.3.3" gene 29689..30510 /locus_tag="PFL_0028" /db_xref="GeneID:3480628" /name="aroE" CDS 29689..30510 /db_xref="GI:70733541" /db_xref="GeneID:3480628" /protein_id="YP_257180" /localization_and_confidence="Unknown, Class 3" /product="shikimate 5-dehydrogenase" /translation="MDQYVVFGNPIGHSKSPLIHRLFAQQTGQQLEYNTLLAPLDDFT GTARSFFAHGRGANVTVPFKEEAYRLCDSLTERAQRAGAVNTLSKQADGRLLGDNTDG AGLVRDLKVNAGVSLKGKRILVLGAGGAVRGALEPLLAEQPEALVIANRTVEKAELLA ELFADLGPVSASGFDWLQESVDLIINATSASLSGELPPIAGSLIEAGKTVCYDMMYAK EPTPFCRWASEQGAALVLDGLGMLAEQAAEAFYLWRGVRPDSGPVLAELRRQLAQ" /EC_number="1.1.1.25" gene complement(30626..32194) /locus_tag="PFL_0029" /db_xref="GeneID:3480629" CDS complement(30626..32194) /db_xref="GI:70733542" /db_xref="GeneID:3480629" /protein_id="YP_257181" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="sulfate transporter family protein" /translation="MAWPDRQSLLPLLSWLPRQTRASVGRDLLVGLSGAILALPQSIA YALIAGLPPEYGLYAAIVPVLIACLWGSSWHLICGPTAAISIVLYASVSPLAVPASED YITLILLLTLLAGVFQWLLGMLRFGALVNFVSHSVVLGFTLGAAVVIALGQLPNLLGL ELPNQATALNSLSQLLQHLGEVDRPSLLLGLGTLALGVAFKLLAPRWPGLLLSLVFSA LVVWLLPGVFGHVQLVSAFVGRLPPFSPLPLDLELILRLLPSAVAVGMLGLVTSLSIA RSLSARSEQLLDANQEVRAQGLSNMVGAFFSGYLSSGSFTRSGLSYEAGACSPLAGVF SALWVALFAVAGAGLIAHIPIPAMAGSILLICWGLVDHRGIRALFRVSRAEFVVMSLT CVATLLLELQTAIYAGVLASLFFYLKRTSQPRVQQSSEGDEDILRVGGSIFFGASHYL QVRMQRCHAPRLVIDARQINFIDYSGVEMLHQEARRLRRQERSLILRRARQAVKEELI KLEGPERCPIHFED" gene complement(32295..33212) /locus_tag="PFL_0030" /db_xref="GeneID:3480630" CDS complement(32295..33212) /db_xref="GI:70733543" /db_xref="GeneID:3480630" /protein_id="YP_257182" /localization_and_confidence="Unknown, Class 3" /product="glycine/betaine family, ABC transporter, substrate-binding protein" /translation="MQRLSTALTLGLLALGSASAWADSCETVKMADPGWSDIAATNAI TGFLLDGMGYKAKIDTLAVPITFGGLKDGRVDVFLGNWMPAQQGFHDKFVANGDVTQL AKNLEGTEFTLAVPDYVWEAGVHDFADLDKFADKFDKKLYGIGSGAPANLSLQEIIKS NQFNLGQWKLIESSEQAMLAEVSRATKKQRFITFLGWTPHPMNVQLKMRYLTGGEKYF GASGSVYTLTRKGYAQACPNVGKLLGNLRFTQEMENSIMAAVVNSKLSNTEAAKAWIK AHPAVLEQWLEGVRTIDDKEALAAVKSRL" gene complement(33230..34744) /locus_tag="PFL_0031" /db_xref="GeneID:3480631" /name="betC" CDS complement(33230..34744) /db_xref="GI:70733544" /db_xref="GeneID:3480631" /protein_id="YP_257183" /localization_and_confidence="Cytoplasmic, Class 3" /product="choline-sulfatase" /translation="MKRKNILFIMADQMAAPLLPFYGPSPIKLPHLSRLAAQGVVFDA AYCNSPLCAPSRFTLVSGQLPSRIGAYDNAADFPADVPTYAHYLRRLGYRTALSGKMH FCGPDQLHGYEERLTSDIYPADYGWAVNWDQPDVRPSWYHNMSSVLQAGPCVRTNQLD FDEEVVFKAQQYLFDHVREAGDQPFCLTVSMTHPHDPYTIPRAFWDLYRDDQIPLPQT PPQSELDPHSQRLLKVYDLWDKPLPVDKIRDARRAYFGACSYIDSNVGKLLQTLEDTG LADDTLIVFSGDHGDMLGERGLWYKMHWFEMAARVPLLICAPGQFTASRVSAAVSTAD LLPTLVELAGGRVEPDLPLDGRSLVPHLQGQGGHDEVFGEYMAEGTIGPLMMIRRGAY KFIYSEDDPCLLFDLHHDPQERFDLGQSPEHRPLFAAFLAEARAKWDIPRIHQQVLAS QRRRRLVAEALSRGKLKSWDHQPLVDASQQYMRNHIDLDDLERKARYPQPCQNQ" /EC_number="3.1.6.6" gene 34859..35809 /locus_tag="PFL_0032" /db_xref="GeneID:3480632" CDS 34859..35809 /db_xref="GI:70733545" /db_xref="GeneID:3480632" /protein_id="YP_257184" /localization_and_confidence="Cytoplasmic, Class 3" /product="transcriptional regulator, LysR family" /translation="MYEALCDLSLDLLRVFEAAARLRSFTAAAVELGTTQPAISQQIK RLEEQLGVRLFDRIYRGIELTESAALLLDQVQAGLQSIDAGLSALSQQHQHEVLQVAT DFAFAAYWLMPRLHRFHEANPQVDVSLVTSERSHSMLRSDIDVAVLFGDGRFRQGESH WLFSEEVFPVCSPLLLKDRAAPLPAPSLLELPLLHLRGEGSNHWFDWSGVFRELGLAG APAPGQLRFDNYTLLIQAAIGGQGVAIGWRHLVDDLLEQGLLCRPIAESALSAYGYYV VLPQRKRRGPLIQRFVDWLMSEQAGSAQSLKGLALPSIAR" gene complement(35806..36450) /locus_tag="PFL_0033" /db_xref="GeneID:3480633" CDS complement(35806..36450) /db_xref="GI:70733546" /db_xref="GeneID:3480633" /protein_id="YP_257185" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MVKLVLYGAMSSLGSALMAESLRRQHEVIAILDDLTALAPRPGL RAKGGDLFDPDRVKQSVAGSSAVICLLDAPDLPGSTTPGQAPDPVNQVRAVDALIEGM QGAGIRRLMLVGEFSVLDNPPSSTSLPHHAAQEILDALRSSALDWTLINAPRGVAGLG IEHFNQVGDSLEPGLAEPLRRLNGVAIGISDELRLNLHLREHVSFIATQPQAAT" gene 36554..36880 /locus_tag="PFL_0034" /db_xref="GeneID:3480634" CDS 36554..36880 /db_xref="GI:70733547" /db_xref="GeneID:3480634" /protein_id="YP_257186" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MQRIKGYHAHVYFDASTIDQARALCERAAQLFELKMGRVHERPV GPHPDWSCQLAFGPEVFAQVVPWLALNRQGLVVFLHPDTGDDLLDHTDHAIWMGAMRP LDLRGF" gene complement(36936..37379) /locus_tag="PFL_0035" /db_xref="GeneID:3480635" CDS complement(36936..37379) /db_xref="GI:70733548" /db_xref="GeneID:3480635" /protein_id="YP_257187" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="hypothetical protein" /translation="MKMPKRLIAGAAVLMLSASPLLQVMADERGGYDRGGPQQGHWDN RGNEHRGPGDDRHGGPPRDFGPVRQTIRDNHGYFVRGAPPPPGIHLVRGQPLPRGYYG ERLEPRALSRLPVYPGYEWRRMGGDIVLIAVGTGIVYEILDGVLY" gene complement(37501..38313) /locus_tag="PFL_0036" /db_xref="GeneID:3480636" /name="trpA" CDS complement(37501..38313) /db_xref="GI:70733549" /db_xref="GeneID:3480636" /protein_id="YP_257188" /localization_and_confidence="Cytoplasmic, Class 3" /product="tryptophan synthase subunit alpha" /translation="MSRLQTRFAQLKEQNRAALVTFVTAGDPNYDTSLAILKGLPAAG ADVIELGMPFTDPMADGPAIQLANIRALGAKQNLAKTLQMVREFREGNSDTPLVLMGY FNPIHHYGVPRFIADAKAAGVDGLIVVDMPPEHNSELCDPAQAAGIDFIRLTTPTTDD ARLPKVLDGSSGFVYYVSVAGVTGAGAATLEHVEEAVARLRRHTDLPISIGFGIRTPE QAAAIARLADGVVVGSALIDHIASAESSEQAVDGVLSLCAALSEGVRKARVS" /EC_number="4.2.1.20" gene complement(38313..39533) /locus_tag="PFL_0037" /db_xref="GeneID:3480637" /name="trpB" CDS complement(38313..39533) /db_xref="GI:70733550" /db_xref="GeneID:3480637" /protein_id="YP_257189" /localization_and_confidence="Cytoplasmic, Class 3" /product="tryptophan synthase subunit beta" /translation="MTQSQLRNGPDDNGLFGAFGGRYVAETLMPLILDLAREYEKAKE DPEFLKELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQ ILLARRMGKKRIIAETGAGMHGVATATVAARFGLDCVIYMGTTDIERQQANVFRMKLL GAEVIPVVAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGK ETREQMQAQEGRLPDSLVACIGGGSNAMGLFHPFLDDKSVEIIGVEAAGYGIETGKHA ASLNGGVPGVLHGNRTFLLQDDDGQIIDAHSISAGLDYPGIGPEHAWLHDIGRVEYTS VTDDEALAAFHQCCRLEGIIPALESAHALAEVFKRAPNLPKDHLMVVNLSGRGDKDMQ TVMHHMQQSQQEKH" /EC_number="4.2.1.20" gene 39681..40574 /locus_tag="PFL_0038" /db_xref="GeneID:3480638" /name="trpI" CDS 39681..40574 /db_xref="GI:70733551" /db_xref="GeneID:3480638" /protein_id="YP_257190" /localization_and_confidence="Cytoplasmic, Class 3" /product="transcriptional regulator TrpI" /translation="MSRDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVL EEHLGLSLFVKEGRGLKLTDAGIRLRDASSEAFERLRDVCAELTQGSADAPFVLGCSG SLLARWLIPRLGRLNADLPDLRLHLSAGEGDLDPRRPGLDALLVFAEPPWPADMQVYE LASERIGPVLSPRYAGYPRLRQAPAGVLASEALLHTTSRPQAWPSWARRNDLNPETLK YGQGFEHLYYLLEAAVAGLGVAIAPQPLVAEDLLAGRLVAPWGFSDTPGQLALWLPKR AADGRARQLAQWLENELRQQL" gene complement(40571..40897) /locus_tag="PFL_0039" /db_xref="GeneID:3480639" CDS complement(40571..40897) /db_xref="GI:70733552" /db_xref="GeneID:3480639" /protein_id="YP_257191" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MANTSLRKASLESMEAEISSLLKSLESLKDDASDESRKTLKALK SNAESALKHSRSLLSDAYEEVKVKTRETGIATRDYAQEHPWTTAGVAVGAIGLLAAYL LCKRGD" gene 41056..41271 /locus_tag="PFL_0040" /db_xref="GeneID:3480640" CDS 41056..41271 /db_xref="GI:70733553" /db_xref="GeneID:3480640" /protein_id="YP_257192" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MTDHHTYKKVELVGSSPNSIEDAINNALAEAHKSIKHLEWFEVT ETRGHIKDGKAAHFQVTLKVGFRIANS" gene 41406..41630 /locus_tag="PFL_0041" /db_xref="GeneID:3480641" CDS 41406..41630 /db_xref="GI:70733554" /db_xref="GeneID:3480641" /protein_id="YP_257193" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MKKLVLAAALLSLAGTALAAGKPCEELKSEIAAKIDANGATHYS LEVVDKGAAADGKVVGSCEAGTKEIVYKRG" gene complement(41691..42692) /locus_tag="PFL_0042" /db_xref="GeneID:3480642" CDS complement(41691..42692) /db_xref="GI:70733555" /db_xref="GeneID:3480642" /protein_id="YP_257194" /localization_and_confidence="Unknown, Class 3" /product="bacterial luciferase family protein" /translation="MKPLSAVKYSTLDLVPVRENGSPGQSLRNSLDLAQHVEKLGYTR FWVAEHHNMDGIASSATSVLIGYLAGGTSTIRVGSGGVMLPNHAPLVIAEQFGTLESL YPGRIDLGLGRAPGSDQMTARALRRERSGSADDFPEDVAELMAYLGPRTPEQRVIAMP GTGTNVPVWLLGSSLFSAQLAGERGLPYAFASHFAPRYMHEAIRVYRNHFKPSAVLDK PYVMLGVPLVAADTDEQADYLATSVYQRILALMRGQSLVQRKPVQSMDGLWLPHEKEA VASFLGLAMVGSPAKIRAKLQVLIEQTGADELIFTCDLYEHADRLHSYELLSQVMKG" gene 42933..43364 /locus_tag="PFL_0043" /db_xref="GeneID:3480643" /name="osmC" CDS 42933..43364 /db_xref="GI:70733556" /db_xref="GeneID:3480643" /protein_id="YP_257195" /localization_and_confidence="Unknown, Class 3" /product="hydroperoxide resistance protein OsmC" /translation="MSIKKKASAHWEGDLKTGIGSISTETGVLREAPYGFKARFEGGK GTNPEELIGAAHAGCFSMAFSMILGEAGLKADSIDTQAEVTLDQVDGGFAITAVHLIL KAKIPGASQQQFDELSKKAKEGCPVSKVLNAKISLDATLLS" /EC_number="1.11.1.-" gene 43521..43754 /locus_tag="PFL_0044" /db_xref="GeneID:3480644" CDS 43521..43754 /db_xref="GI:70733557" /db_xref="GeneID:3480644" /protein_id="YP_257196" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="hypothetical protein" /translation="MKRFALAVVSCALATSALAAPKPCEELKAEIEAKIQAQGVPSYT LEIVTNDEVHDNNMVVGSCENGTRKIIYQKNDR" gene complement(43761..44180) /locus_tag="PFL_0045" /db_xref="GeneID:3480645" CDS complement(43761..44180) /db_xref="GI:70733558" /db_xref="GeneID:3480645" /protein_id="YP_257197" /localization_and_confidence="Unknown, Class 3" /product="lipoprotein, putative" /translation="MRPFLLFLALGTLSACTTPLPGVDPQQAWIDLATPTPGGKLVMA ERLDNQRLDDGRFFQVSPGSHELMVRFDFEVFAGGMGMNNDPQERLCYLSLRYDHFQA GQRYRLEARNLGFTPSARLYNAQREIVAEERMINCVP" gene complement(44223..44636) /locus_tag="PFL_0046" /db_xref="GeneID:3480646" CDS complement(44223..44636) /db_xref="GI:70733559" /db_xref="GeneID:3480646" /protein_id="YP_257198" /localization_and_confidence="Unknown, Class 3" /product="lipoprotein, putative" /translation="MRVLLLTTGLLTLGGCAGLPDPDPAQAWVDLAPPRDTHLQALEV DAKNIDDPRYFQVQPGSHELTLRYQFAVQPSNIGPDAEPLWRDCQLNVKFKDFGAGQR YQVQAGNIGFHPWARLYDEQHTLLDKARPAGCQRS" gene 44696..45805 /locus_tag="PFL_0047" /db_xref="GeneID:3480647" CDS 44696..45805 /db_xref="GI:70733560" /db_xref="GeneID:3480647" /protein_id="YP_257199" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="hypothetical protein" /translation="MTRPCSSHGLLDPLLRFLFPALMLLLLNGCSSVGYYSQLASGQL QLLRARVPVAQVVADPSRDASLRAHLAQSQQARRFASEHLHLPDNRSYRLYVDIGRPY VVWNVFATPEFSLNPQTHCFPIAGCVAYRGYYSQGAARGEAALQQLKGMDVAIGGVEA YSTLGWFDDPIISSMMHWGDERLATLIFHELAHQRFYVKDDTEFNESYATFVEQEGTR QWRAYRGLAPLSDGELRQRDQFTQLVLDTRKRLEQLYALPLPAEQMRQRKAAEFERMR SEYRQLRDSQWAGSKRYDAWINTPLNNARLLPFGLYDQWVPAFAALFRQVKGDWPAFF AAVETLGRLPAEERKAALIRLQDTVALAPAPASGL" gene complement(45834..46484) /locus_tag="PFL_0048" /db_xref="GeneID:3480648" CDS complement(45834..46484) /db_xref="GI:70733561" /db_xref="GeneID:3480648" /protein_id="YP_257200" /localization_and_confidence="Cytoplasmic, Class 3" /product="HAD-superfamily hydrolase, subfamily IA, variant 1" /translation="MHYQTVLFDLDGTLTDPREGITRSIQFALGKLGIDEPDLSKLEH FIGPPLLQAFMQFYGFDEARAWEAVNFYRERFKVTGLYENRVFDGVTPLLETLGGQGR QLYIATSKPWVFAREIARHFDFAKHFKVIYGSELDGTRTDKVELIAHLLEQEQLDPAS TLMIGDRKHDLIGARRNGLDAAAVGYGFGSHEELTAEAPAYHFQTLGELHQAFLPR" gene complement(46513..47058) /locus_tag="PFL_0049" /db_xref="GeneID:3480649" CDS complement(46513..47058) /db_xref="GI:70733562" /db_xref="GeneID:3480649" /protein_id="YP_257201" /localization_and_confidence="Unknown, Class 3" /product="carbonic anhydrase, family 3" /translation="MAIRSYQNHTPNLGERAFVDHSAVVIGDVEIGADSSVWPLTVIR GDMHRIRIGARTSVQDASVLHITHAGPFNPDGFPLLIGDDVTIAHKVMLHGCSIGNRV LIGMGSIVMDGAVVEDDVIVGAGSLVPPGKRLESGFLYVGSPVKQARPLTDKERAFFT YSAANYVKLKDLHLAEGYDRP" gene 47134..49212 /locus_tag="PFL_0050" /db_xref="GeneID:3480650" /name="prlC" CDS 47134..49212 /db_xref="GI:70733563" /db_xref="GeneID:3480650" /protein_id="YP_257202" /localization_and_confidence="Cytoplasmic, Class 3" /product="oligopeptidase A" /translation="MFLPAKVPTVSVNNPLLQPYDLPPFSAIRAEHVQPAIEQILADN RAAIADILKTQATQPTWAGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACL PALSAYSTEMGQNRELFQAFDALAKSPEAAGFDVAQKTILEHSLRDFRLSGIDLPPEQ QKRYAEVQSKLSELGSRFSNQLLDATQAWTKHITDEAALAGLTDSAKAQMAAAAQAKD LEGWLITLEFPSYYAVMTYAQDRALREEVYAAYSTRASDQGPNAGQNDNGPVMEEILD LRQELAKLLGFASFSELSLATKMAESSDQVLSFLRDLAKRSKPFAAQDLEQLKAYAAE QGCPDLQSWDSGFYGEKLREQRYSVSQEALRAYFPIDKVLSGLFAIVQRLYGIEIAEQ KGFDTWHPDVRLFEIKENGQHVGRFFFDLYARANKRGGAWMDGARDRRRTLDGVLQSP VANLVCNFTPAVSGKPALLTHDEVTTLFHEFGHGLHHLLTRVEHAGVSGINGVAWDAV ELPSQFMENWCWEPEGLALISGHYESGEPLPQDLLQKMLAAKNFQSGLMMVRQLEFSL FDFELHATHGDGRSVLQVLETVRDEVSVMRPPAYNRFPNSFAHIFAGGYAAGYYSYKW AEVLSADAFSRFEEEGVLNSATGRAFREAILARGGSQEPMVLFVDFRGRAPSIDALLR HSGLSEDAAA" /EC_number="3.4.15.5" gene 49209..49487 /locus_tag="PFL_0051" /db_xref="GeneID:3480651" CDS 49209..49487 /db_xref="GI:70733564" /db_xref="GeneID:3480651" /protein_id="YP_257203" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MSDAPVKTKKRFIAGAVCPACSEQDKLMMWSEDDVPHRECVACG YSDTLNEQGLSVPKELGTRVNSATPKVADIKVQSVQFFPNPKLKKKTD" gene complement(49607..50278) /locus_tag="PFL_0052" /db_xref="GeneID:3480652" CDS complement(49607..50278) /db_xref="GI:70733565" /db_xref="GeneID:3480652" /protein_id="YP_257204" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MIPRMSSIRFIPALCLSLLALLAGPQVQAAEAPSRRPDQWAQPV EKQYNLYQMSPTLYRSALPDKGAVPLLQQLKVATVINFLPESDASWLSAPGINQVQLP YRTNHVDDADVLKALRAIQSAEAQGPVLMHCKHGSDRTGLMSAMYRVVIQGWSKEEAL NEMTQGGYGDSSHFKDGIRYMMQADVDKLRTALANGDCSTSVFATCSVKSWFETVSAT KPLSN" gene 50560..51315 /locus_tag="PFL_0053" /db_xref="GeneID:3480653" CDS 50560..51315 /db_xref="GI:70733566" /db_xref="GeneID:3480653" /protein_id="YP_257205" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MSDQDRDNPRREFLRKSLTLIPVVTVASTGLGGSLLAAASETAI AATPATPGKQPAGSGQGYEPGYFTAEEWAFIKAAVERLIPADEMGPGALEAGVPEYID RQMNTPYAAGALWYMQGPFKADAAPEMGWQSKLVPKDIYRLGIAATDAWCKELKGQTF AAQDSATRDDLLKQLEAGTPQFDAVPAKLFFNLLLQNTKEGFFSDPIHGGNKGLVGWT LIGFPGARADFMDWVERNEQYPFPAVSIRGERA" gene 51318..53102 /locus_tag="PFL_0054" /db_xref="GeneID:3480654" CDS 51318..53102 /db_xref="GI:70733567" /db_xref="GeneID:3480654" /protein_id="YP_257206" /localization_and_confidence="Unknown, Class 3" /product="gluconate dehydrogenase, putative" /translation="MATVMKKVDAVIVGFGWTGAIMAKELTEAGLNVLALERGPMQDT YPDGNYPQVIDELTYSVRKKLFQDISKETVTIRHSVNDVALPNRQLGAFLPGNGVGGA GLHWSGVHFRVDPIELRMRSHYEERYGKNFIPKDMTIQDFGVSYEELEPFFDYAEKVF GTSGQAWTVRGQLVGDGKGGNPYAPDRSDHFPLESQKNTYSAQLFQKAANDVGYKPYN LPSANTSGPYTNPYGAQMGPCNFCGFCSGYVCYMYSKASPNVNILPALKPLPNFELRP NSHVLRVNLDSSKTRATGVTYVDGQGREIEQPADLVILGAFQFHNVRLMLLSGIGKPY DPITGEGVVGKNFAYQNMATIKAYFDKDVHTNNFIGAGGNGVAVDDFNADNFDHGPHG FVGGSPMWVNQAGSRPIAGTSNPPGTPAWGSAWKKATADYYTHQVSMDAHGAHQSYRG NYLDLDPVYRDAYGLPLLRMTFDWQENDIKMNRFMVEKMGKIAEAMNPKAIALLGKKV GEHFNTASYQTTHLNGGAIMGTDPKTSALNRYLQSWDVHNVFVPGASAFPQGLGYNPT GLVAALTYWSARAIREQYLKNPGPLVQA" gene 53115..54419 /locus_tag="PFL_0055" /db_xref="GeneID:3480655" CDS 53115..54419 /db_xref="GI:70733568" /db_xref="GeneID:3480655" /protein_id="YP_257207" /localization_and_confidence="Unknown, Class 3" /product="cytochrome c family protein" /translation="MKALVIATLALLGSAAANAAEADQQALVQQGEYLARAGDCVACH TAKDGKPFAGGLPMETPIGVIYSTNITPDKTGIGDYSFEDFDKAVRHGVAKGGSTLYP AMPFPSYARVSDADMQALYAYFMKGVAPVARDNQDSDIPWPLSMRWPLSIWRWMFAPS VETPAPAAGSDPVISRGAYLVEGLGHCGACHTPRALTMQEKALSASGGSDFLSGSAPL EGWIAKSLRGDHKDGLGSWSEEQLVQFLKTGRSDRSAVFGGMSDVVVHSMQYMTDADL TAIARYLKSLPANDPKDQPHQYDKQVAQALWNGDDSKPGAAVYIDNCAACHRTDGHGY TRVFPALAGNPVLQSADATSLIHIVLKGGTLPATHSAPSTFTMPAFAWRLSDQEVADV VNFIRSSWGNQASAVKPGDVAALRNGDLQSTSNDDLGQVTSH" gene complement(54465..54821) /locus_tag="PFL_0056" /db_xref="GeneID:3480656" CDS complement(54465..54821) /db_xref="GI:70733569" /db_xref="GeneID:3480656" /protein_id="YP_257208" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MPRTPGTLEKIFYAAEAYLPSYEQGADLIIVRAPDGQLWGVACE FELCTQDIEKATLSGQQPFDEADPKFAEVRWSPCHDGIGLLPASWQDLMTAGLADCIA GYQLESRLGIQRFTQG" /EC_number="2.7.7.7" gene 55021..56079 /locus_tag="PFL_0057" /db_xref="GeneID:3480657" CDS 55021..56079 /db_xref="GI:70733570" /db_xref="GeneID:3480657" /protein_id="YP_257209" /localization_and_confidence="Cytoplasmic, Class 3" /product="radical SAM domain protein" /translation="MFNPLPPRGRGTASNPHNRFAPNRSVAEDDGWYQEVPLTQGTEV RFETAKSIITRNSSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGLDFETKLI AKSNTAALLEQQLSKPGYRCAPINLGSNTDPYQPIEREQQLTRRTLEVLLRYRHPVTI VTKGSLILRDLDLLSELARQRLVAVMISLTTLDDELKRILEPRAAAPKARLRAIRVMR GAGIPVGVLCSPMIPMINDSELESLLSEAHAAGAQSAAYMMLRLPLEVAPLFEEWLAA HYPQRAAHVLSLIRQSRGGELYDSRFGARMRGEGPFADLLAQRFAKALKRLGLNRREG FDLDCSAFCPPGGQMSLL" gene 56347..57057 /locus_tag="PFL_0058" /db_xref="GeneID:3480658" CDS 56347..57057 /db_xref="GI:70733571" /db_xref="GeneID:3480658" /protein_id="YP_257210" /localization_and_confidence="Unknown, Class 3" /product="carbonic anhydrase" /translation="MAASAPAPTEVAETADAALQHIVDGFLHFHHEVFPQQEELFKKL ATAQRPRAMFIACADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYA VLALGVHHIIVCGHSDCGAMRAVLNPQSLEKMPTVKAWLRHAEVARTMVHENCDCADE SSSMHVLTEENVIAQLQHLRTHPSVASRMANGQLFIHGWVYDIETSSIKAYDADKGCF LPLDGSHPIPVATPKARF" /EC_number="2.7.1.39; 4.2.1.1" gene 57149..58684 /locus_tag="PFL_0059" /db_xref="GeneID:3480659" CDS 57149..58684 /db_xref="GI:70733572" /db_xref="GeneID:3480659" /protein_id="YP_257211" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="sulfate transporter family protein" /translation="MRAAQLKSVLPRELLASVVVFLVALPLCMGIAIASGLPPAKGLI TGIIGGLVVGWLAGSPLQVSGPAAGLAVLVFELVRQHGVAMLGPILLLAGLLQLLAGR LRLGCWFRVTAPAVVYGMLAGIGVLIVLSQVHVMLDAAPQASGLDNLVGFPQALAQAL PSLGWQAGLLGLATIAVMWGWDKWRPQALRFIPGALLGVGLATLASLLLALPVKRVEV PANLAEAIDWLRPADLLNLADPNLLIAAFAVAFIASAETLLSAAAVDRMHSGQRSDFD RELSAQGVGNMLCGLLGALPMTGVIVRSSANVQAGAQTRYSTIFHGLWLLGFVLVLSS VLQSIPVASLAGVLVYTGFKLVDLKVFRGLGRYGRMPMLTYAVTALAIVFSDLLTGVL IGFALTLAKLAFKASRLKISLIDLAEEGEMELRLVGAATFLKVPALTRVLATIPPATT VHVPLSNLSYIDHACLELLEDWNRANSAKGSRLVIETRGLKRRLEGRLTTTSGVGAAA ARG" gene 58930..59466 /locus_tag="PFL_0060" /db_xref="GeneID:3481448" CDS 58930..59466 /db_xref="GI:70734360" /db_xref="GeneID:3481448" /protein_id="YP_257212" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MVHRFVQLVGEGFADQLVGDEVGDSHVQGDQRTAEMLDVQVVDL FHQTVGQIGFIQQAVEADVAIHDGRRLEEELLGDLQHRLDLRLDAGFPGYRVGGVQKV WNLVDIGADKTGHDALGVDFGQLDGGVQVRQLALQLTGQEAGTGFVLLGQFDLLAQCG GVHENSREQGQLNRENIS" gene 59792..60919 /locus_tag="PFL_0061" /db_xref="GeneID:3480660" CDS 59792..60919 /db_xref="GI:70733573" /db_xref="GeneID:3480660" /protein_id="YP_257213" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="cytochrome c oxidase, subunit II" /translation="MMRHPHVWMGLLLWSVFSQAQAAWTVNMTPGATEISHAVFDLHM TIFWICVVIGVIVFGAMFWSMIVHRRSVGQVPAKFHESTTVEILWTIIPFLILVAMAV PATATLIKMYDTSEPDVDIQITGYQWKWHYKYLGQDVEFFSNLATPADQIHNQSTKGE HYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRVDKPG IYRGQCAELCGKDHGFMPIVVEVKSQADYDTWMGERKAEAAKLKELTSKEWTLDELVA RGDKIYHTTCVACHQAEGQGLPPMFPALKGSKIATGPKEAHLSLVFHGKPGTAMAAFG KQLSEVDIAAVVTYERNAWGNNKGDMVTPKEVLALKQAESK" /EC_number="1.9.3.1" gene 61002..62597 /locus_tag="PFL_0062" /db_xref="GeneID:3480661" CDS 61002..62597 /db_xref="GI:70733574" /db_xref="GeneID:3480661" /protein_id="YP_257214" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="cytochrome c oxidase, subunit I" /translation="MSAVIDDHGHAGHDDHAHGPAKGLMRWVLTTNHKDIGTLYLWFS FCMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTTMHGLVMVFGAVMPAFVGLANWM IPLMIGAPDMALPRMNNFSFWLLPAAFLLLISTLFMPGGGPNFGWTFYAPLSTTYAPE SVTFFIFAIHLMGVSSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVM PVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSI IPTFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPLVGELFFMYATLLIAVPT GVKVFNWVSTMWQGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYQDTYFVV AHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVG LAGMPRRIPDYNLQFADFNMVSSIGAFTFGATQIFFLFIVIKCIRGGKAAPAKPWEGA EGLEWSIPSPAPYHTFVTPPEVK" /EC_number="1.9.3.1" gene 62697..63254 /locus_tag="PFL_0063" /db_xref="GeneID:3480662" CDS 62697..63254 /db_xref="GI:70733575" /db_xref="GeneID:3480662" /protein_id="YP_257215" /localization_and_confidence="Unknown, Class 3" /product="cytochrome C oxidase assembly protein" /translation="MAEVTLKKLVTRLLLVVVAMFVFGFALVPIYDVMCKALGINGKT GGQYADQGQQVDVSRQVRVQFLSTNAIDMVWDFYPKSDDIVVHPGAVNEMIFIARNPS DHPMSAQAIPSISPSSAAMYFHKTECFCFTQQVLQPGEKIEMPVRFIVDRDMPKDVKH LTLAYTLFDITARHPPVAVAAKNGG" gene 63288..64175 /locus_tag="PFL_0064" /db_xref="GeneID:3480663" CDS 63288..64175 /db_xref="GI:70733576" /db_xref="GeneID:3480663" /protein_id="YP_257216" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="cytochrome c oxidase, subunit III" /translation="MATHEHYYVPAQSKWPIIATVGMFVTVVGLGTWFNDLKAARPES HGPLIFFVGGLLLAYMLFGWFGAVVKESRAGLYSAQLDRSFRWGMSWFIFSEVMFFMA FFGALFYVRHMSGPWLGGEGHKGIAHMLWPNFEFVWPLLNNPDPKLFPSPKGTISPWG LPLLNTILLVSSSVTVTIAHHALKKGHRGALKIWLALTVLLGCAFLGFQAEEYIHAYH ELGLTLGSGIYGATFFMLTGFHGAHVTIGTLILFVMLMRIMRGHFDAEHQFGFEAASW YWHFVDVVWIGLFVFVYVL" /EC_number="1.11.1.6; 1.9.3.1" gene complement(64182..64361) /locus_tag="PFL_0065" /db_xref="GeneID:3480664" CDS complement(64182..64361) /db_xref="GI:70733577" /db_xref="GeneID:3480664" /protein_id="YP_257217" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MLIATVVSLFSGLFFLVKDDSSSKRLVTSLSIRVALAVVTVGLI AWGFFSGQLVSHAPW" gene 64348..65196 /locus_tag="PFL_0066" /db_xref="GeneID:3480665" CDS 64348..65196 /db_xref="GI:70733578" /db_xref="GeneID:3480665" /protein_id="YP_257218" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MAISIRTMAALSMVGLRGKRDVQQYSEWISQPCRPAMKGFRPGI GPTLVVLLLLPVLVALGFWQLGRGEQKRQLLASYAERRAAEPVALFELLASEDPAFRR VRLHGHFDADHSLLLDNRLHDGKVGVELLQPFLDQASGRWLLVNRGWLPWPDRRTPPV FSTPQQSLSLDAWVYVSPGAAFQLHADPSGASWPRLITAVGPQALWAELGRSGFDHEV RLESGPGAYLTEWPVVAMGPEKHQAYAVQWFAMALALFALYLYFGWHNTREKRHGNGH ESTQHL" gene 65252..65752 /locus_tag="PFL_0067" /db_xref="GeneID:3480666" CDS 65252..65752 /db_xref="GI:70733579" /db_xref="GeneID:3480666" /protein_id="YP_257219" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MVIGPMILATGMYKLQFWVPESRSYHGELIGNGQTRAQIGVQAE EDRWQVLVTAPGECAVDCQQLVYLARQIQIALGRDASRASHALASARPLSAEYEAKLQ REYPQLQRYPLDLATFTKGANDKEAPQLWIVDPHSNLVLRYDARVKGKDLLNDLRHLL KLSNIG" gene 65763..66842 /locus_tag="PFL_0068" /db_xref="GeneID:3480667" CDS 65763..66842 /db_xref="GI:70733580" /db_xref="GeneID:3480667" /protein_id="YP_257220" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="cytochrome oxidase assembly protein" /translation="MAKPGFRLALFATLLALIVVLLGAYTRLTHAGLGCPDWPGCYGF ISVPKGEAQLAHAELHFPDTPVEAHKGWNEMIHRYFAGTLGLLIVLLAARAWTHRRHP GQPLKLPLFLLAVVFAQAAFGMWTVTLKLWPQVVTAHLLGGFATLSLLFLLTLRLSGV LPALIVPRRLQYWATAGLVLVIGQIALGGWVSSNYAAVACIDLPTCHGQWWPNMDFAN GFHLTQHIGPNYLGGQLDSDARTAIHMTHRVGAVLVTLVLLGLAWQLRQTGMTRLAGL VLVALGAQVSLGLSNVFFHLPLPVAVAHNAGGAALLLTLVLVNYHARTSLVRARDRLP LGWRLSPRKQMAGPITIKGEMPWRL" gene 66830..67732 /locus_tag="PFL_0069" /db_xref="GeneID:3480668" CDS 66830..67732 /db_xref="GI:70733581" /db_xref="GeneID:3480668" /protein_id="YP_257221" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="protoheme IX farnesyltransferase" /translation="MATLISERQHPQAIWRDYLELTKPKVVVLMLITSLVGMFLATRA GVPWTVLVFGNLGIALCAGGAAAVNHVVDRRIDALMARTHKRPLAEGRVSPRAALAFA LLLALAGQALLLTFTNPLTAWLTLASLLGYAVVYTGFLKRATPQNIVIGGLAGAAPPL LGWVAATGHMSAEPLLLVLIIFAWTPPHFWALAIHRKEEYAKADIPMLPVTHGEHYTK VHILLYTFALLAVSLLPYVIHMSGVLYLVCALALGGRFLQWAWVLYRGTRPHAAINTF KYSIYYLFLLFIALLVDHYLLLNL" /EC_number="2.5.1.-" gene 67729..68364 /locus_tag="PFL_0070" /db_xref="GeneID:3480669" CDS 67729..68364 /db_xref="GI:70733582" /db_xref="GeneID:3480669" /protein_id="YP_257222" /localization_and_confidence="Unknown, Class 3" /product="Sco1/SenC family protein" /translation="MTRTQKTVFILVALVALVLGLTVNKVLSGKGQGDPTALIDAGII LLPQNRTLPAVKMVDQDGQPVVIDELKGKWSLLFFGYTFCPDICPTTLAQLRQIKSEL PKDAVDKLQVVLVSVDPNRDTPQQLKQYLGYFDKDFKGLTASSVEDLQKLANAVSIPF IPADTSKPNYTVDHSGNLAVIGPDGTQRGFIRAPLNNQKLVAQLPVMLQRK" gene complement(68548..69321) /locus_tag="PFL_0071" /db_xref="GeneID:3480671" CDS complement(68548..69321) /db_xref="GI:70733584" /db_xref="GeneID:3480671" /protein_id="YP_257223" /localization_and_confidence="Unknown, Class 3" /product="D-methionine-binding lipoprotein MetQ" /translation="MKKLLVAFAAVAAFSAHAAETLTVAATPVPHAEILEFVKPALAK EGVDLKVKVFTDYVQPNVQVAEKRLDANFFQHQPYLDEFNKAKGTKLVNVAGVHVEPL GAYSSKYKQLSELPGGATVVIPNDATNGGRALLLLDKAGLIKLKDSNNILATIKDITE NPKDLKFRELEAATIPRVLTQVDLALINTNYALEAKLDPSKDALVIEGKDSPYVNILV ARPDDKDSDAMNKLVAALHSPEVKQFILEKYKGAIVPAF" gene complement(69381..70046) /locus_tag="PFL_0072" /db_xref="GeneID:3480670" CDS complement(69381..70046) /db_xref="GI:70733583" /db_xref="GeneID:3480670" /protein_id="YP_257224" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="probable ABC transporter permease" /translation="MDTFFANIDWLEIWLATGDTLMMLGGSLLFTVLLGLPLGVLLFL CSPRQLLEQKSLYALLSLVVNILRSLPFIILLIVMIPFTVLITGTSLGVAGAIPPLVV GATPFFARLVETALREVDRGIIEATQSMGASTRQIITNALLPEARPGIFAAITVTAIT LVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTVVLLLVLVQVLQTVGDKLVVHF SRK" gene complement(70046..71053) /locus_tag="PFL_0073" /db_xref="GeneID:3480672" CDS complement(70046..71053) /db_xref="GI:70733585" /db_xref="GeneID:3480672" /protein_id="YP_257225" /localization_and_confidence="Cytoplasmic, Class 3" /product="D-methionine ABC transporter, ATP-binding protein" /translation="MIEFQNVHKTYRVAGKDIPALHPTSLRVENGQVFGLIGHSGAGK STLLRLINRLENPSGGTIVVDDEDVTALDASGLRRFRQQVGMIFQHFNLLSSKTVADN VALPLTLAGELSRSDIDRRVAELLDRVGLADHAKKYPAQLSGGQKQRVGIARALATKP KILLCDEATSALDPQTTASVLQLLAEINRELNLTIVLITHEMDVIRRVCDQVAVMDAG VIVEQGPVADVFLHPKHPTTRRFVQEDEQIDENEQRDDFAHVPGRIVRLTFQGDSTYA PLLGTVARETGVDYSILAGRIDRIKDTPYGQLTLAITGGDMEAAFARFTAADVHMEVL R" gene 71323..73461 /locus_tag="PFL_0074" /db_xref="GeneID:3480673" /name="katE" CDS 71323..73461 /db_xref="GI:70733586" /db_xref="GeneID:3480673" /protein_id="YP_257226" /localization_and_confidence="Cytoplasmic, Class 3" /product="catalase HPII" /translation="MSTKKPDTPKSQMAGTDTLDRGNSNSKLKSLETFRSDATGQALR TNQGVKIADNQNTLKAGARGPSLLEDFIMREKITHFDHERIPERIVHARGVGAHGYFQ SYDNHSALTKAGFLRDPGKKTPVFVRFSTVQGPRGSGDTVRDVRGFAVKFFTDEGNFD LVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFWDFVSLQPESAHMVIW AMSDRAIPKSLRAMQGFGVHTFRLINAQGRSSFVKFHWRPTVGTCSLVWDEAQKLAGK DTDFHRRDLWESIEAGDYPEWEFGVQIIAEEDEHNFDFDILDPTKLIPEELVPITPLG KMVLNRNPDNYFAETEQVAFCPGHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFH ELPINRPLAPFHNSQRDAMHRITLDKGRASYEPNSIDGGWPRETPPAAEDGGFESYNE RIDAHKIRQRSESFSDHFSQARLFYKSMSKHEQEHIIAAYSFELGKVEREWIRERQVN EILANIDLQLAARVAENLGLAAPKKATVAERKTSLSRSPALSQANLLPGNIKTRKVAI LAANGVDGAAIDALKKALKAEGAHAKLLGPTSAPVTTADGKSLPVDASMEGLPSVAFD AVFVPGGAQSIKALSGNGVALHYLLEAYKHLKAIALHGDARELLHSLRLEADEGLIVG ADAKALKAFIAAIAQHRVWSREEKAKAIPA" /EC_number="1.11.1.6" gene complement(73518..74237) /locus_tag="PFL_0075" /db_xref="GeneID:3480674" CDS complement(73518..74237) /db_xref="GI:70733587" /db_xref="GeneID:3480674" /protein_id="YP_257227" /localization_and_confidence="Unknown, Class 3" /product="lipoprotein, putative" /translation="MKPFASRYLLLVAFSLLLGACQSTPPAATEVPDARATAIAQLEQ NIASSELATAEDQLSALQAQTPDDPQLVQYQRQLAEAYLQRSQIVLQKGDVNAAATAL SRARALMPKAPALTGGVNNAIAHARKAELDKAEAALKAAEARPAAKLIDPTAESTTVA LNVTDIRKLRHQLDALAADVVNYQCDVSIQIPRTEDYPWLSTLLGKRVKKLDPDFEQK ISRQIVRHVPAQMVLTPRKAQ" gene complement(74275..75063) /locus_tag="PFL_0076" /db_xref="GeneID:3480675" /name="psaC" CDS complement(74275..75063) /db_xref="GI:70733588" /db_xref="GeneID:3480675" /protein_id="YP_257228" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="zinc ABC transporter, permease protein" /translation="MADFLLYALLAGLALAVVAGPLGSFVVWRRMAYFGDTLSHAALL GVALGFLLDVSPAVAVTVGCLLLAVLLVTLQQRQPLASDTLLGILAPSTLSLGLVVLS FMHEVRIDLMAYLFGDLLAISPGDLAWILGGSAAVLLLLVALWRPLLAITVHEELARV EGLPVASLRLALMLLIAVVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMALGAS LLGMLAVCGGLALSWFKDTPAGPSIVVTAATLFLLSFVLPRRGV" gene complement(75056..75841) /locus_tag="PFL_0077" /db_xref="GeneID:3480676" CDS complement(75056..75841) /db_xref="GI:70733589" /db_xref="GeneID:3480676" /protein_id="YP_257229" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="zinc ABC transporter, ATP-binding protein" /translation="MSNALIRLEQVGVTFAGQNVLENIQLSVEPGQIVTLIGPNGAGK TTLVRAVLGLLKPDTGSVWRKPKLRVGYMPQKLHVDPTLPLSVLRFLRLVPGVDRTRA LAALKEVGAEQVIDSPVQSISGGEMQRVLLARALLREPELLVLDEPVQGVDVAGQAEL YSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELF GKNAPSLAIYHHHHDHAHDLHGSVVTQPASGHAHVHGENCKHG" gene complement(75841..76323) /locus_tag="PFL_0078" /db_xref="GeneID:3480677" CDS complement(75841..76323) /db_xref="GI:70733590" /db_xref="GeneID:3480677" /protein_id="YP_257230" /localization_and_confidence="Unknown, Class 3" /product="transcriptional regulator, Fur family" /translation="MPKTPLASRPHDHSHCVHSALSEADALCARQGLRLTALRRRVLE LVWQSHKPLGAYDILAVLSEQDGRRAAPPTVYRALDFLLENGLVHRIASLNAFVGCNH PEHAHQGQFLICRECHAAIELEQKSISDAIISSARDVGFVVEGQTVEVVGLCSGCQGA " /EC_number="1.9.3.1" gene 76381..77310 /locus_tag="PFL_0079" /db_xref="GeneID:3480678" CDS 76381..77310 /db_xref="GI:70733591" /db_xref="GeneID:3480678" /protein_id="YP_257231" /localization_and_confidence="Periplasmic, Class 3" /product="zinc ABC transporter, periplasmic zinc-binding protein" /translation="MSIVPRLFRLFVAFTFSLFAIGSAQAEVRVLTSIKPLQLIAAAV LDGVAVPEVLLPPGASPHNYALRPSDVRKVQSVDLLYWIGPDMEGFLPRVLKGRSLPS VAVQDLPGMRLRHFAEDSHSHAEDADEHDHDHRPGTLDAHLWLSPINARVIATRMAAD LSAADPANAARYQNNLKAFSERLDALDARLKARLAGIAGKPYFVFHEAFDYFEDAYGL KHAGVFSVAAEVQPGAQHVAAMRARLQQVGKTCVFSEPPLRPRLAETLVAGLPVKLAE LDALGGYTPATAQGYEQVLEKLGNDLAGCLEQL" gene complement(77402..78352) /locus_tag="PFL_0080" /db_xref="GeneID:3480679" /name="thrB" CDS complement(77402..78352) /db_xref="GI:70733592" /db_xref="GeneID:3480679" /protein_id="YP_257232" /localization_and_confidence="Cytoplasmic, Class 3" /product="homoserine kinase" /translation="MSVFTPLARPELETFLAPYGLGRLLDFQGIAAGSENTNFFISLE QGEFVLTLVERGPVQEMPFFIELLDVLHQANLPVPYALRTTDGVALRELAGKPALLQP RLAGKHIKQANAQHCAQVGELLGHLHVATKDHMIKRKTDRGLDWMQEEGRQLLSHLAP TAQDLLQRALDEIAAQKVKILALPRANIHADLFRDNAMFEGTHLTGLIDFYNACSGPM LYDVAIALNDWCSDDEGVLDGQRARALLGAYAALRPFTAAEAELWPTLLRVACVRFWL SRLIAAESFAGQDVLIHDPMEFQQRLAQRQQVSIALPFAL" /EC_number="2.7.1.39" gene complement(78418..78705) /locus_tag="PFL_0081" /db_xref="GeneID:3480680" CDS complement(78418..78705) /db_xref="GI:70733593" /db_xref="GeneID:3480680" /protein_id="YP_257233" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MRTLNRLLLTGLIAIAPLAAIAAEDAPSADPEVTIRTEGDKTIQ EYRQNGFLYAIKITPKGGKPYFLVRADGSDGNFIRSDQPDMLIPSWKIFEW" gene 78780..81569 /locus_tag="PFL_0082" /db_xref="GeneID:3480681" /name="polA" CDS 78780..81569 /db_xref="GI:70733594" /db_xref="GeneID:3480681" /protein_id="YP_257234" /localization_and_confidence="Unknown, Class 3" /product="DNA polymerase I" /translation="MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLK SLRKQYPDSPFAVVFDAKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHASVIALGFP LLCVEGVEADDVIGTLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVE GVKEKFGVAPEQIIDYLALMGDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDI VPTLPIRGAKTLPAKLEEHKEMAFLSYQLATIKVDVPLDVGLDDLHLGEPDREKLVEL YSLLEFKSWLDELQRDAKRVELSGAEATPAAVPPQAVEQAPLELQYETILDQERFDAW LEKLKGAKLIAFDTETTGIDAQQAQLVGLSFSVKAGEAAYVPLTHSYMGAPAQLDRDS VLLALKPLLEDPKLLKVGQHAKFDMNILANCAIGGDQANGITVRGVAFDTMLESYVLN STATRHDMDSLAQKYLDHSTVSFQDIAGKGAKQLTFDQIPLEQAGPYAAEDADVTLRL HQVLFDKLSAIPSLASVLTDIEMPLVPVLARIERQGALVDDKLLGVQSIELGDKMVAL EREAFEIAGEEFNLGSPKQLGSILYDKLGLPVLKKTAKGQPSTAEEVLAKLAEDDYPL PRVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVASTGRLSSSDPNLQNIPV RTAEGRRIRQAFIAPPGYKLLAADYSQIELRIMAHLSRDEGLLNAFRNNLDVHTATAA EVFKVELKDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKQAKAYIDTYFARYPG VREYMDRTRAQAADQGYVETIFGRRLYLPEINSNKPQERAGAERTAINAPMQGTAADI IKKAMVAVDNWLASSGLDARVILQVHDELVLEVREDLVDQVREEIRGHMSGAATLDVP LLVEVGVGNNWDEAH" /EC_number="2.7.7.7" gene complement(81985..82791) /locus_tag="PFL_0083" /db_xref="GeneID:3480682" CDS complement(81985..82791) /db_xref="GI:70733595" /db_xref="GeneID:3480682" /protein_id="YP_257235" /localization_and_confidence="Unknown, Class 3" /product="GTP-binding protein" /translation="MLRSNAHSRFIALVNFILRWDKAHTKSAALYTGVTETETTPLAA STLGIAPIGNPMQLKNPILGLCQQATFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSA LNTLTHASLARTSKTPGRTQLLNFFKLDDDRRLVDLPGYGYAKVPIPLKQHWQRHLEA YLGSRESLKGLILMMDIRHPMTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTL LKVQSQIRKGWGEAVTIQLFSAPKRMGLEEAYTVLAGWMELADKGAEAEA" gene 83154..83759 /locus_tag="PFL_0084" /db_xref="GeneID:3480683" CDS 83154..83759 /db_xref="GI:70733596" /db_xref="GeneID:3480683" /protein_id="YP_257236" /localization_and_confidence="Periplasmic, Class 3" /product="cytochrome c4" /translation="MNKLLVSLLLTLGITGVAHAAGDAAAGQAKAAVCGACHGPDGNS MAPNFPKLAGQGEKYLNKQLHDIKSGKRQVLEMTGLLTNLSDQDLADIAAYFASQKGS VGAADPKVVARGEELFRGGKLDQGMPACTGCHSPNGAGNAAAGFPHLGGQHAQYVAKQ LTDFREGNRTNDGDTLVMRSIAGKLSNKDIEAVSSYIQGLH" gene 83957..84586 /locus_tag="PFL_0085" /db_xref="GeneID:3480684" CDS 83957..84586 /db_xref="GI:70733597" /db_xref="GeneID:3480684" /protein_id="YP_257237" /localization_and_confidence="Periplasmic, Class 3" /product="thiol:disulfide interchange protein, DsbA family" /translation="MRNLILSAALVTASLFGVTAQAAEPLEAGKQYVELSSAVPVAVP GKIEVVELFWYGCPHCYAFEPTINPWAEKLPADVNFVRIPAMFGGIWNIHGQLFITLE AMGVEHKVHKAVFEAIHGGKKLATPEEMAEFLAGEGVDKDKFLSTYNSFAVKGKVEDA KKKAQAYQITGVPTMVVNGKYRFDLGTAGGPEGALSVADQLIAKERAAK" gene 84599..85477 /locus_tag="PFL_0086" /db_xref="GeneID:3480685" CDS 84599..85477 /db_xref="GI:70733598" /db_xref="GeneID:3480685" /protein_id="YP_257238" /localization_and_confidence="Cytoplasmic, Class 3" /product="endonuclease/exonuclease/phosphatase family protein" /translation="MPRWSSERIVGLHDPQVNEHHLASSGLPADSRLRLLSFNIQVGI STERYRHYLTRGWQHLLPHHGRADNLQKIGNLLGDFDLVALQEADGGSLRSGYVNQVE HLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWAIEDHPLPGPKGRGAILVRFGE GPEALVVVMMHLALGARTRTRQLAYIRELIGGYKHQVLMGDMNTHASDLLEHSPLRDL SLLAPQLQATFPSWRPQRCLDHILLSPSLTLERVEVLAQPISDHLPVAVEIRLPGSLT ADALPALSPAPRGTDE" gene 85474..87657 /locus_tag="PFL_0087" /db_xref="GeneID:3480686" CDS 85474..87657 /db_xref="GI:70733599" /db_xref="GeneID:3480686" /protein_id="YP_257239" /localization_and_confidence="Cytoplasmic, Class 3" /product="diguanylate cyclase, putative" /translation="MSDDANRWKEKYLKSIEQQEKLERRWAARLDLLRRGLVRSTLAA EGTDRAVDQCMKEMREVVRTDDMDAGLAALLPRLEKAVLDSEQRRETRVEQMSSALTA LVSQLQSLPLPREVSRPLKAFAKQLDGRVGQAREIPLLLGELSSLQGKALSQLETPAE PDRPSLLQRLFGSREASETPAPAEEAVATNPPLPAAAAEAHPQAEEAPAPEDGAREHY QTPTQALPEAVSAPAAPAPAQPEVQLEPEPGAQPVASDEPEVAAVPAPAPVVAFVPPV LVQEAPAEPVPAIEVEPQATISPVAEPQAPVDPGVVAASDSPPAPVAEAALNPDELVP LPTVSPAVLLDSLPLPAVMAEALAAIDPEQSEHDVLYALPDSPEPSYSSVAKHIEHTL LGLLDDLSLPERHRPQAEAMRDRLQHGLNWYELLPILDDLAVLMLAITDSGQHEFETY LKQLNERLEAFQSNLQAASDGHADSSSAARAMDSQIREQVDGLQSSVQEAADLDDLKQ VLESHLEGLLGTMDHHQKQRDEREREVAARLQSLAERVSSMEQEAQGYREHLEEQRQK ALIDPLTGLPNRAAWSERLEHEVGQWQQHGNSLLLAMLDLDHFKRINDNYGHLAGDKV LKIIANVLRKRLRGSDFIARFGGEEFVLLLPNTPWPVGVRIVEALRAAIEACPFHFKG EPVTITVSVGLSAFKAGDRSDLVIKRADQALYRAKDAGRNRVEAG" gene 87759..88538 /locus_tag="PFL_0088" /db_xref="GeneID:3480687" CDS 87759..88538 /db_xref="GI:70733600" /db_xref="GeneID:3480687" /protein_id="YP_257240" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="N-acetylmuramoyl-L-alanine amidase" /translation="MKLLALALSLLILAGCASGPRIDTSHPSVNYDQRAQFIIVHYTS ASLERSLALLTHGQVSSHYLIGDDKSATIYKLVDEQYRAWHAGDSQWQGRTWLNSSSI GIEIVNPGFRDGPSGRLWYPYSEAQIQNLIVLLKDISKRNNISPRHIIGHSDIAPMRK LDPGPLFPWKRLAEAGLGLWPDAQAVARQQAFFTVSPPSIGWYQQQLAQLGYATPQTG ELDKATRNVLAAFQMHYRPGRFDGTPDAESAAILMVLNQTK" /EC_number="3.4.24.70" gene 88615..90234 /locus_tag="PFL_0089" /db_xref="GeneID:3480688" CDS 88615..90234 /db_xref="GI:70733601" /db_xref="GeneID:3480688" /protein_id="YP_257241" /localization_and_confidence="Unknown, Class 3" /product="EAL domain protein" /translation="MPAAREPLRTWFHRPWTLAMLAAVLSAVILLLGSAGLAMHQVQQ RESEQMNAQGQRFLERLEQLFGQLREGLDVLEAQPLRECNADLIAALQQVSYSYRFIY EAAYRDATHTCSNWPRQNLLPAARPPDIRGPTYSYWLNTSTQPNENLAALMLGRGNFR VATSRGHLTDVVDLPPGGSLMVVVDHGARAIPVLGPARAWPPAQPWRGGRDGPLQVTP DLLIYRMPTRNPEYQLVLITPRASLQGEVLDGWWWLLPSSLVLALFIGGLVYQLVRQR QSLGAELQGALRRGELQVLYQPIFDLSSRLCVGAEALLRWRRPDGTLTSPDLFIPLAE NTGQIRQITDFVLQRLLEQLGHVLRANPQLYISVNLAACDVMVPRIGMVMARLLATHR VAARQIAFEVTERGLIDVVVARNNLQALRDVGHQVLIDDFGTGYCSLAYLQSLPVDCL KIDKAFIDALGHDAASSGVAPHIIRMAHALKLKVIAEGIEFEDQALLLSSEGVSFGQG WLFAHALSALQFTELITRGRRLVARRVDDEA" gene complement(90239..92023) /locus_tag="PFL_0090" /db_xref="GeneID:3480689" /name="kinB" CDS complement(90239..92023) /db_xref="GI:70733602" /db_xref="GeneID:3480689" /protein_id="YP_257242" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="alginate biosynthesis sensor protein KinB" /translation="MKLAMKLRTRLFLSISALITVALLGLVLGLVSVMQMASTQESLI RNNFITLDLGLKLRQTLGDQLIIMLGKQPDRAALETSRQHYLELLDEGIAHDRQTQVQ SGFQQARSDYLSFYQAFERNSTASGLHDNNELTERFNALRGGLINEHKRALDNISQVE QQARNRAWLVAGLLGLVALAVLIIGFVTAHAIARRFGGPIEALAKAADKIGEGNFDVT LPISAAAEMNLLTRRFGIMAEALRQHQATNVDELLAGQQRLQAVLDSIDDGLLMIDRQ GRLEHLNPVAQRQLGWDQERLGQGLGSALQRPELDEQLQLVLRGGNLERAPDDLDIEV DGESRLLTYSLTPVSHTQGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTG MHMAFGLLQERLHFPEESRETDLLNTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLAP CPLEELLVQAQGRFSEQAQQQGIDLLLEIQAPLPRLHADRAQLERVLDNLIDNALRHT ASEGQIRLQARRHGERVIVSVEDNGEGIAYGQQGRIFEPFVQVGRKKGGAGLGLALCK EIVQLHGGRMGVYSRPGQGTQFYLALPL" gene complement(92034..93380) /locus_tag="PFL_0091" /db_xref="GeneID:3480690" /name="algB" CDS complement(92034..93380) /db_xref="GI:70733603" /db_xref="GeneID:3480690" /protein_id="YP_257243" /localization_and_confidence="Unknown, Class 3" /product="alginate biosynthesis transcriptional regulatory protein AlgB" /translation="MESAPENQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQA DALLQRQVFDLCFLDLRLGEDNGLDVLAQMRTQAPWMRVVIVTAHSAVDTAVDAIQAG AADYLVKPCSPDQLRLATAKQLEVRQLSARLEALEGEVRKPKDGLDSHSPAMKVVLET ARQVASTDANILILGESGTGKGELARAIHGWSKRAKKSCVTINCPSLTAELMESELFG HSRGAFTGASESTLGRVNQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVT RRADVRILAATNLNLEDMVRDGRFREDLLYRLNVITLHLPPLRERSEDILTLADRFLA RFVKEYSRPARVFSDEAREALLNYRWPGNIRELRNVVERASIICPQERVEISHLGMAE QPTNNAPRIGAALSLDELEKAHIGAVLATSDTLDQAAKTLGIDASTLYRKRKQYNL" gene 93822..94106 /locus_tag="PFL_0092" /db_xref="GeneID:3480691" CDS 93822..94106 /db_xref="GI:70733604" /db_xref="GeneID:3480691" /protein_id="YP_257244" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MNRQRLAQLRIAPLHLQQGLFAVLALLVTLIAGQQFQRWQDSQA PAPRMPVHHFTQTHFSSVSSQLNDQAPMQLMAVDQAQPVADAPRQERWVF" gene 94188..94352 /locus_tag="PFL_0093" /db_xref="GeneID:3480692" CDS 94188..94352 /db_xref="GI:70733605" /db_xref="GeneID:3480692" /protein_id="YP_257245" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MLSWAITFLIIAIVAAVLGFGGIAGTATGIAKILFVVFLVMFIA SFFFGRRGRG" gene 94367..94822 /locus_tag="PFL_0094" /db_xref="GeneID:3480693" CDS 94367..94822 /db_xref="GI:70733606" /db_xref="GeneID:3480693" /protein_id="YP_257246" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MKTLTAALLLGASALASAANDGQARANQLLGSDPQFRETWQGVV HKEERLPEWVMNLSGDAPQQMNAMTEDGDQYLVGPLCETAQSCQNQRLIVAFSFDKKH AYAMLVDVPAGLPVDKSPTRHANYRFLGKPDDGMQALLQEQLRKDPNWY" gene 95568..96899 /locus_tag="PFL_0095" /db_xref="GeneID:3480694" /name="gltT" CDS 95568..96899 /db_xref="GI:70733607" /db_xref="GeneID:3480694" /protein_id="YP_257247" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="proton/glutamate symporter" /translation="MKKAKLSLAWQILIGLVLGIAIGALLNHFSAEKAWWISNVLQPA GDIFIRLIKMIVIPIVISSLIVGIAGVGDAKKLGRIGLKTIIYFEIVTTIAIVVGLLL ANLFHPGAGIDMSTLGTVDISKYQATAAEVQHEHAFIETILNLIPSNIFAAMARGEML PIIFFSVLFGLGLSSLQSDLREPLVKMFQGVSESMFKVTHMIMNYAPIGVFALIAVTV ANFGFASLLPLAKLVILVYVAIAFFAFVILGLIARLFGFSVIKLMRIFKDELVLAYST ASSETVLPRVIEKMEAYGAPKAICSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDL SISQQLLLVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRVMDMAR TALNVIGNALAVLVISRWEGMYDDAKGQRYWNSLPHWRSKEKLPAGEASKG" gene 97076..98305 /locus_tag="PFL_0096" /db_xref="GeneID:3480695" CDS 97076..98305 /db_xref="GI:70733608" /db_xref="GeneID:3480695" /protein_id="YP_257248" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="nucleoside transporter" /translation="MLNGLWLGFFIVATVSALAQWLVGGNAGIFAAMVESIFAMAKLS VEVMVLLFGTLTLWLGFLRIAEKAGIVEWLAKVLGPLFKRLMPEVPPGHPALGLITLN FAANGLGLDNAATPIGLKAMRALQELNPSATTASNAQILFLVLNASSLTLLPVTIFMY RAQQGAADPTLVFLPILLATSASTLVGLLSVAVMQRLRLWDPVVLAYLVPGALALGAF MALLATLSATALASLSSILGNLTLFGLIMLFLVVGALRKVKVYEAFVEGAKEGFDVAK SLLPYLVAMLCAIGVLRASGALDFGLDGIRHLVEWAGWDTRFVDALPTALVKPFSGSA ARAMLIETMQTQGVDSFPALVAATIQGSTETTFYVLAVYFGAVGIQRVRHAVGCALLA ELAGVVAAIAVCYWFFG" gene complement(98378..99007) /locus_tag="PFL_0097" /db_xref="GeneID:3480696" CDS complement(98378..99007) /db_xref="GI:70733609" /db_xref="GeneID:3480696" /protein_id="YP_257249" /localization_and_confidence="Unknown, Class 3" /product="lipoprotein, putative" /translation="MKRAYRLLAPLGLSAALALTGACSILPKGEPLDIYRLPVSQAGA TAPNQALPWSLQLLKPQAGDALNSARIAVIPQGNLISSYKASRWSDPAPILLRNRLLD GFQRDGRVQLLSTDDSNLQTDLALGGDLQAFQTEYQGNAAQVVIRLDARLIRGYDQKI LASRRFEVRQALAETGVPAVVTGFGQAGDALTRQVVDWAVGQGNRALKH" gene complement(99004..99942) /locus_tag="PFL_0098" /db_xref="GeneID:3480697" CDS complement(99004..99942) /db_xref="GI:70733610" /db_xref="GeneID:3480697" /protein_id="YP_257250" /localization_and_confidence="Unknown, Class 3" /product="mce related protein family" /translation="METRAHHVLIGLFTVIVVAGALLFGLWLAKSSVDSAFQDYQIVF NEAVSGLSKGSSVQYSGIKVGDVVNLRLDPKDPRRVLAQIRLGSETPIKEDTQAKLAL TGITGTSIIQLSGGTPQSPTLKGKDGELPTIIASPSPIARLLNNSNDLMTGVNLLLHN ANRMFSPDNVARVSSTLDNLQKTSASIAEQRDDLRQLMQQLGSISKQTGAMLEQTTAL MRNANGLLNDQGKQMFGSAEHAMRSLEQSSATLNKLLSDNQDSLNNGMQGLNGLAPAV RELRETLSSLRAITRRLEANPGGYLLGNEKNKEFTP" gene complement(99944..100747) /locus_tag="PFL_0099" /db_xref="GeneID:3480698" CDS complement(99944..100747) /db_xref="GI:70733611" /db_xref="GeneID:3480698" /protein_id="YP_257251" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="ABC transporter, ATP-binding protein" /translation="MSRPPRAPAKAVIEVRGLCNRFGKQSVHENLDLDVYQGEILGVV GGSGSGKSVLLRSIVGLRQPSEGSVRVFGQDLPSLPEQQRSLIERRFGVLFQKGALFT SLTVTENVALPLIEHAGLSRADAEHLAAVKLALAGLPLSAADKYPASLSGGMIKRAAL ARALALDPDILFLDEPTAGLDPVGAAAFDQLILTLRDALGLSVFLVTHDLDTLYTITD RVAVLAQKKVLVADAIDIVAETDDEWIHQYFHGPRGRAAYQAATQTNEG" gene complement(100744..101892) /locus_tag="PFL_0100" /db_xref="GeneID:3480699" CDS complement(100744..101892) /db_xref="GI:70733612" /db_xref="GeneID:3480699" /protein_id="YP_257252" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="ABC transporter, permease protein, putative" /translation="MTSSVTPGTAQLDLAHSPAQLRIGGDWTLAHYSDLKRLSQSLDG RYDSSTHIDLNGLGALDTAGASLLVELLGAERLGQSAEHPDCTLSAADRALLHTVYTS LNDFCVPVKEPEISVSVQLLSRIGSAVYTVWQDTLKVLGFIGLILETLARGLLRPKRW RITPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGATVLANFGASIFTVDLVAFSFLR EFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLGLDPVELLVLPRVLALLVSL PMLTFLAMLSGIVGGAVVCALSLDISPAMFLSLLHSDIGVKHFLLGLVKAPIFAFLIA AIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVIDAVAALFFMEMGW" gene complement(101947..103002) /locus_tag="PFL_0101" /db_xref="GeneID:3480700" CDS complement(101947..103002) /db_xref="GI:70733613" /db_xref="GeneID:3480700" /protein_id="YP_257253" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="hypothetical protein" /translation="MIPPMPNLTLLIQRILELMKRYPGIIALGGFISGVGSFILVDRQ QSLASWIAVILLVSWVWLMLENSLTQLFTKVFKREIPQPLLRYATQMIHQESLFFVLP FFFITTSWNSGQLVFTGLLGAAALISITDPLYYKWLAPRRWLFLALHTLTLFAALLTA LPLILHLTTAQSFKLALGIAMLLSFPSLASILPIRSLRSALTVLAITLAIGSTGWLLR SWVPPATLWLTEDAISTQLQDRTPGDSLEQISTAQVSSTGLYAYTAINAPRGLDERIY HVWQFNGSEVDRVALDIHGGRKEGYRAWSHKQNFPANPAGDWQVRVITEDGQVIGVLR FEITAPDQDAAKTGEAK" gene complement(103170..104552) /locus_tag="PFL_0102" /db_xref="GeneID:3480701" CDS complement(103170..104552) /db_xref="GI:70733614" /db_xref="GeneID:3480701" /protein_id="YP_257254" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="peptidase, M16 family" /translation="MRCLLFACLLLGSAQGWALDRFQVEGYTLPNGLQLLLKPGSERG HVAIRLVVGVGLDDFACADKELPHLLEHLLFSGVDDSGEGGLEERMQALGGEWNAYTS NADTTFVIEAPARNQRKVLDLLLSLLTHTRLDDNAVAAAKQVVEREGGGHYSHLQRWL DRQDLGHKAGNQLAVELGLKCAERAEVGNLTLAQLEQVRKDWYAPNNMTLIVVGELDR LLPAYLERTYGALEPVEPSEHPDLPQIQGTAAPERTLVHGWVGQSAQLHWLFPEPVLD QQHDETFDLLKDYLDWALYRQLRLEHELSYGPWSDREVFGGVGFLSLNADLERDDLPQ ARQVVEQLKARLLKDGLDPATFARLKQAAIDRQAWAVQGNSALADYYWSALGDFDNGR FSDPAKRLKAVSLEQANLALRQLLQQPGYLRIEQPLLSDEQLLWLIGGLLSLILLGSF GVYLLRRRAR" gene complement(104609..106267) /locus_tag="PFL_0103" /db_xref="GeneID:3480702" CDS complement(104609..106267) /db_xref="GI:70733615" /db_xref="GeneID:3480702" /protein_id="YP_257255" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="Na+/Pi cotransporter family protein" /translation="MLTLLNLLSAVALLIWGTHIVRTGILRVYGSNLRHVIGQNMARR PLAFIAGILVTAMVQSSNATAMLVTSFVGQGLMALTPALATMLGADVGTALMARVLTF DLSWLSPLLIFLGVIFFLSRKQTRAGQLGRVGIGLGLIILALQLIVEAAAPITHAQGV KVLFASLTGDILLDALMGAVFAMVSYSSLAAVLLTATLAGAGVISLPVAIGLVIGANI GSGVLAFLSTSMQNAAGRQVALGSLLYKLIGLLLIIPVLDPLAHWMDSLDFSPQEVVI GFHLLYNTARCLLLLPTVGPMARLCAWLLPERPQENGRARPRHLDPTALATPSLALAN AARETLRIGDLIDSMLEAMRDALQGKQTAITQELRALSDDVEALYSAIKLYLAQMPRE DLSDQDSRRWAEIIELAFNLKLASDLIERMLRKVQQQKTSQRRSFSEVGLEELTGLHA QLIANLRLGLSVFLSADPESARQLLREKRRFRAQERRLAHAHVSRLQRKIVQSIETSS LHLELIADMKRLNSLFCSSAYVVLETSDTGALEVEEMADITHSP" gene complement(106484..107251) /locus_tag="PFL_0104" /db_xref="GeneID:3480703" CDS complement(106484..107251) /db_xref="GI:70733616" /db_xref="GeneID:3480703" /protein_id="YP_257256" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="membrane protein, TerC family" /translation="MEWLTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQA RTRIFGLALAMVTRILLLLSITWVMRLTADLFVVFGQGISGRDLILFFGGLFLLWKSS QEMYHALEGEDETIDEPKGKGGNFLYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVA AIIVAVLVMMLAAGTISEFIDKHPSLKMLALSFLLVVGTVLIAEAFEVHVPKGYVYFA MAFSLAVEAINIKMRTAIAKKKKQQDPVKLRKDVPGQ" gene complement(107319..108626) /locus_tag="PFL_0105" /db_xref="GeneID:3480704" CDS complement(107319..108626) /db_xref="GI:70733617" /db_xref="GeneID:3480704" /protein_id="YP_257257" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="citrate transporter" /translation="MLTFLGFAMVITFMFLIMTKRLSALIALIIVPILFALFGGFAPK IGPMMLEGITKLAPTGVMLMFAILYFALMIDSGLFDPAVRKILKLVKGDPLKVSVGTA VLALVVSLDGDGATTYMICVAAMLPLYSRIGMSPRIMAGLIILAGGVMNMTPWGGPTA RAASALHVDPSDIFVPMIPAMLAGVVAILAIAYMYGKRERARLGELHLAGDEIDHSEI SVSQYPDARRPKLIWFNGALTFALMCTLIAGLLPLPVLFMVAFSIAMIVNYPCLQQQK DRVAAHAGSVLAVVGLIFAAGIFTGILSGTGMVDAMSKSLLAVIPEALGPYLAVITAL VSMPFTFFMSNDAFYYGVLPVLAEAASHYGITAVEMARASIVGQPVHLLSPLVPSTYL LVALAGIEFGDHQRFTLKWAVLVCLCIMFAALLMGIFPLFSTL" gene 108946..109347 /locus_tag="PFL_0106" /db_xref="GeneID:3480705" CDS 108946..109347 /db_xref="GI:70733618" /db_xref="GeneID:3480705" /protein_id="YP_257258" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MRELHTGGCHCGRLRYQFSGPLRDIAHCHCSICRRVSGGLVTTW ITLPASAFEWLEGVPARYDSSGSCARYFCGNCGAHLALITHLSPDSIDVTIATLDHPE RAPADRHIWTDSRLPWLHLDEHLPQEPQETL" gene complement(109459..111420) /locus_tag="PFL_0107" /db_xref="GeneID:3480706" CDS complement(109459..111420) /db_xref="GI:70733619" /db_xref="GeneID:3480706" /protein_id="YP_257259" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MKPLLAWLLAGTLALLCGTAQADLQLRLKADGLSPAQQHASQAL LDEAMQALPPRFIQQLDRTIDVGWTDRMPDNAYGEASLVSELDLNRALLPSLTDGSAA TQKTSRPHGTVRREMLATVLHELTHIYDRARLWPGAERSLIQRCTRKNSTSGLIGLPD ECRGQNDRRFTLSDDPRLLDLAGWPQYVGRRGEREQHNRQVARSPDIYEITNPKEFVA VNMEYFLLDPSYACRRPTLYRYYQEHFGWAPAAKDSCAKSFAFLNAGNDFAKTPLGQV DPERVYAVDYLLAEANQNWVSRWGHSMLRLVICAPGRPRGPDCRLDLDQHLVLSYRAF VGDVQLSSWDGLVGKYPSRLFVLPLSQVIDEYTKTELRSLASVPLKLSRSEIEEVVEH AAEMHWSYDGNYYFLSNNCAVESLKLLRSGSNNKQLIGLDSIMPNGLLEVLKGRGLAD TSVLDDPREALRLGYRFDSFRDRYQAMFEVIKKRLPIKQASVEDWLSLSAEERRHWFD QADLRTSAALLLLEQASYRRQLLLAQDEVKQRYLGARELKNGGMEQANKTLQQILANS GFLSRPAELLGSGGYGLPQPAEWQRLESESSQRQKQLQSLTGDLDKEVRALLEPARAA EIAANEANLKLVGEHLRTLHKAAGGLELP" gene complement(111417..111737) /locus_tag="PFL_0108" /db_xref="GeneID:3480707" CDS complement(111417..111737) /db_xref="GI:70733620" /db_xref="GeneID:3480707" /protein_id="YP_257260" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MRSPLIAATLGLLLLADVAQAHTLVATSNIIVRASGRTIDFTSD TTTSIRDSKVVREAHDDAASFVASNGDIRGAQLEAAFNALRTQLPEARDASDQVLAEA ILAL" gene complement(111765..112073) /locus_tag="PFL_0109" /db_xref="GeneID:3480708" CDS complement(111765..112073) /db_xref="GI:70733621" /db_xref="GeneID:3480708" /protein_id="YP_257261" /localization_and_confidence="Unknown, Class 3" /product="lipoprotein, putative" /translation="MGLFRISLSAPVLIAACWAGSVQAFDLTTQSLVVTVYATGQVTS APFDHKLLLAAQDDAAAFVATDGQLRGARLESALEYLRQDPAKLHASDLELAQAILVQ " gene complement(112177..112494) /locus_tag="PFL_0110" /db_xref="GeneID:3480709" CDS complement(112177..112494) /db_xref="GI:70733622" /db_xref="GeneID:3480709" /protein_id="YP_257262" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MSRLRLLSAAALLALAANAHATSLIVTTDAIVGALKATTDATSD ATSSLRDNKIVRAARDDAASFVATDGAIRGVKLESAFAHIRQQAPQLQASDAQLAQAI LAI" gene complement(113134..113349) /locus_tag="PFL_0111" /db_xref="GeneID:3480710" CDS complement(113134..113349) /db_xref="GI:70733623" /db_xref="GeneID:3480710" /protein_id="YP_257263" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MERTLSSELFFEDKAEKTQASLPLRVIANLMLWQRRISSRHQLA RLDSRLLADAGISEAQRYEELSKPFWR" /EC_number="3.1.2.1" gene complement(113669..115162) /locus_tag="PFL_0112" /db_xref="GeneID:3480711" /name="abfT-1" CDS complement(113669..115162) /db_xref="GI:70733624" /db_xref="GeneID:3480711" /protein_id="YP_257264" /localization_and_confidence="Cytoplasmic, Class 3" /product="acetyl-CoA hydrolase/transferase family protein" /translation="MYRDRIRLPSLLDKVMSAADAAALIEDGMTVGMSGFTRAGEAKA VPHALAERAKVTPLKISLMTGASLGNDLDKQLTEAGVLARRMPFQVDSTLRKAINAGE VMFIDQHLSETVEQLRNQQLKLPDIAVIEAVAITEQGHIVPTTSVGNSASFAIFAKQV IVEINLAHNPNLEGLHDIYIPTYRPTRTPIPLVKVDDRIGSTAIPIPADKIVAIVITN QSDSPSTVSTPDSETQGIANHLIDFLKQEVDAGRMSNKLGPLQAGIGNIANAVMCGLI ESPFENLTMYSEVLQDSTFDLIDAGKLSFASGSSITLSSRRNADVFGNLERYKDKLVL RPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVCGTRMMNGIGGSGDFARNAHL AIFVTKSIAKGGAISSVVPMVSHVDHTEHDVDILVTEIGLADLRGLAPRERARVIIDN CVHPSYRDALNDYFTKACALGGHTPHILRDALSWHINLEETGKMLVE" gene complement(115342..116778) /locus_tag="PFL_0113" /db_xref="GeneID:3480712" /name="pntB" CDS complement(115342..116778) /db_xref="GI:70733625" /db_xref="GeneID:3480712" /protein_id="YP_257265" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="NAD(P) transhydrogenase, beta subunit" /translation="MSMNLVTTLYLIASVCFIQALKGLSHPTTSRRGNLFGMLGMALA VLTTVGLIYKLGAELATAGIGYVIVGLLIGGTAGSIMAKRVEMTKMPELVAFMHSMIG LAAVFIAIAAVVEPQSLGIVKHLGDAIPAGNRLELFLGAAIGAITFSGSVIAFGKLSG KYKFRLFQGAPVQFAGQHKLNLVLGLATLGLGVTFMVTGNLGAFTLMLALAFVMGVLI IIPIGGADMPVVVSMLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAM NRSFFNVLLGGFGNTADAGGPAGSKEARPVKSGSADDATFLLTNADTVIIVPGYGLAV ARAQHALKELTEKLTHRGVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINS EFGQADVVLVLGANDVVNPAAKNDPKSPIAGMPILEAFKAKTIIVNKRSMASGYAGLD NELFYLDKTMMVFGDAKKVIEDMVKAVE" /EC_number="1.6.1.1" gene complement(116778..117101) /locus_tag="PFL_0114" /db_xref="GeneID:3480713" /name="pntAB" CDS complement(116778..117101) /db_xref="GI:70733626" /db_xref="GeneID:3480713" /protein_id="YP_257266" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="NAD(P) transhydrogenase, alpha subunit part 2" /translation="MEELISPGIYNLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAI SAIVIVGAMLAAALTVTPLGKTMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKAVK EEVQK" /EC_number="1.6.1.2; 1.6.1.1" gene complement(117117..118238) /locus_tag="PFL_0115" /db_xref="GeneID:3480714" /name="pntAA" CDS complement(117117..118238) /db_xref="GI:70733627" /db_xref="GeneID:3480714" /protein_id="YP_257267" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="NAD(P) transhydrogenase, alpha subunit part 1" /translation="MHIGVPLETQTGETRVAATPETIKKLIGQGHKVTVQSGAGINAS VVDSAYEAAGATIGNANDAFGAELILKVVAPSDSELALIKSGTVLVGMLNPFSNETIA KLAERGITAFALEAAPRTSRAQSLDVLSSQANIAGYKAVLLAAHYYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFVDVPYETD EERECAVGVGGYARPMPASWMQRQAQAVHERAKQADIVITTALIPGRKAPTLLSADTV AQMKPGSVVIDLAAAQGGNCPLTVADQVVVEHGVTIVGPTNLAGAVAADASALYARNL LDFLKLVFTKEGQFEVNLEDDIVAACLMCRDGQVIRKNA" /EC_number="1.6.1.1" gene complement(118690..119604) /locus_tag="PFL_0116" /db_xref="GeneID:3480715" /name="gcvA" CDS complement(118690..119604) /db_xref="GI:70733628" /db_xref="GeneID:3480715" /protein_id="YP_257268" /localization_and_confidence="Cytoplasmic, Class 3" /product="glycine cleavage system transcriptional activator" /translation="MRLPYMRRKIPSTTALISFEAAARHESFTKAAQELSLTQGAVCR QIASLEEFLGLELFRRSRRGVKLTEAGLSYSRRVATQLDAVERDTLSVMGQQGANVIE LAVVPTFGTQWLLPRLKDFQQQHPEVTVNLTNRTRPFLFADTPFDAAIYFGDADWSGT QSHWLMGENPMPVCSPAMLGKQQELSAEAIAELPLLQQTTRPYAWRQWFNSQQLNIPR DMTGPRYELFSMLAQAAMHDMGIALIPPFLIQRELAEKRLVIANPQALSSIKAYYLMI PERKVESASLRAFRDWLVNQANSYNLEK" gene 119749..120930 /locus_tag="PFL_0117" /db_xref="GeneID:3480716" /name="gcdH" CDS 119749..120930 /db_xref="GI:70733629" /db_xref="GeneID:3480716" /protein_id="YP_257269" /localization_and_confidence="Unknown, Class 3" /product="glutaryl-CoA dehydrogenase" /translation="MGGKASFNWIDPLLLDQQLTEEERMVRDSAEQFAQDKLAPRVLE AFRHEKTDPAIFREMGEVGLLGATIPEQYGGSGLNYVCYGLIAREVERVDSGYRSMMS VQSSLVMVPINEFGTEAQKQKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARKVDG GYSLTGSKMWITNSPIADVFVVWAKDDAGDIRGFVLEKGWKGLSAPAIHGKVGLRASI TGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARYGISWGALGAAEFCWHTARQYTLD RQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVEITSIMKRNSCG KSLDIARMARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHALILGRAQTGIQAF Y" /EC_number="1.3.99.7" gene 120944..122164 /locus_tag="PFL_0118" /db_xref="GeneID:3480717" CDS 120944..122164 /db_xref="GI:70733630" /db_xref="GeneID:3480717" /protein_id="YP_257270" /localization_and_confidence="Cytoplasmic, Class 3" /product="CAIB/BAIF family protein" /translation="MGALSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGNGDDT RAWGPPFLKDAYGENTTEAAYYLSANRNKQSVTIDFTRPEGQQLVRELAAKSDIVIEN FKVGGLAAYGLDYESLKAVNPRLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTG RPEGDEGAGPVKVGVALTDILTGLYSTVAILAALAHRDQGGGGQHIDMALLDVQVACL ANQAMNYLTTGVAPKRLGNAHPNIVPYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQ WADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVSQLELAGVPCGPINDLAQVFA DPQVVARGLAVELPHALAGMVPQVASPIRLSQTPVEYRNAPPLLGEHTAEVLQRVLGM RVEAVDALRHSRVV" gene 122811..124349 /locus_tag="PFL_0119" /db_xref="GeneID:3481476" /name="rrsA" rRNA 122811..124349 /db_xref="GI:70728250" /db_xref="GeneID:3481476" /product="16S ribosomal RNA" gene 124473..124549 /locus_tag="PFL_0120" /db_xref="GeneID:3481527" tRNA 124473..124549 /db_xref="GI:70728250" /db_xref="GeneID:3481527" /product="tRNA-Ile" gene 124560..124635 /locus_tag="PFL_0121" /db_xref="GeneID:3481492" tRNA 124560..124635 /db_xref="GI:70728250" /db_xref="GeneID:3481492" /product="tRNA-Ala" gene 124869..127769 /locus_tag="PFL_0122" /db_xref="GeneID:3481481" /name="rrlA" rRNA 124869..127769 /db_xref="GI:70728250" /db_xref="GeneID:3481481" /product="23S ribosomal RNA" gene 127896..128023 /locus_tag="PFL_r01" /db_xref="GeneID:5228969" rRNA 127896..128023 /db_xref="GI:70728250" /db_xref="GeneID:5228969" /product="5S ribosomal RNA" gene 128126..128244 /locus_tag="PFL_0123" /db_xref="GeneID:3481486" /name="rrfA" rRNA 128126..128244 /db_xref="GI:70728250" /db_xref="GeneID:3481486" /product="5S ribosomal RNA" gene complement(128398..129579) /locus_tag="PFL_0124" /db_xref="GeneID:3480718" CDS complement(128398..129579) /db_xref="GI:70733631" /db_xref="GeneID:3480718" /protein_id="YP_257271" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="PepSY-associated TM helix domain protein" /translation="MRAILVLLHRYMGLATAVFLLLAGLTGSVLAFHHELDEWLNPEF YHTSGKGPVLAPGSLVDSVQAEHPRLQVWYMEYPQEAGHAALLAAVPRTDPATGQPYT ERNQVFYLDPVTAHQQGQRFWGACCFQRQNLVPFLLEFHYNLSLPGNWGLWLMGLVAI AWVIDCFVALLLTLPRGRPFWHKWSTAWKIKGGHAYRLNFDLHRAAGLWLWLLLLPIA ISSVAMNLPSQVFKPVMSLLSSIEPSVYEARGRVPAAELGITRLTYQQAYERALEEGQ RLGLKETIGELYYSFEYNFYGAGFGRHDSQAHGKSWLFFHGTDGRLLGQEIAGQGTLG ERFYRLQLPIHGGRIIGTTGQVIIALLGVLIAVLALTGIYIWWRKLIARRSSKMRKNR A" gene complement(129651..132221) /locus_tag="PFL_0125" /db_xref="GeneID:3480719" CDS complement(129651..132221) /db_xref="GI:70733632" /db_xref="GeneID:3480719" /protein_id="YP_257272" /localization_and_confidence="Outer Membrane, Class 3" /product="outer membrane ferrichrome-iron receptor" /translation="MAGFARTSGLVSKHFNLLPATSTEPTMTLRDTRPSSPCARPLCQ AIRAALLCSSIGLGTVAPQVLAAASAVDAPRHSYSVAPGNLGDALNQFARQAGITLST TPALTQGRQSPGLQGDYSIPQGLNQLLRGSGLEAVSQDGGSYVLRPLPQGSALTLPAT EVKGFALGNALGSMEGYNATHSQIATKTSTALLETSQSVSVVTREQIDDQGAQTVAQT MRYTPGVLTNPYGATHRYDYVAMRGFNDGSVDNIYLDGLKSMGDSGTYSSMQVDPYFL ERVDILKGPSSVLYGRSSPGGLVALTSKKPLYEPYHQIQATVGTQGKQGLGFDFSGPL DDDKHIAYRLIGLTDKSDTQFDHAKEKRFALSPTLSIDFSEDTSLTLQAYLQNDPDGG YHGGMPANGTLNQRNGQRISEHFFEGEPGVDGYKRDQQSFGYQFEHRFNDTFTARQNF RYLDSKVKLDQVYAYGWTNATSNDLNRYYSGGGEKLHSFIVDNMLQAEFLTGDVKHTL LLGADYQRRKTVVDWDQGTLQPINAFNPVYGNSTINYYSHTSYLRRLEQTGVYLQDLI ELDKWRFSLGLRQDWVETSDENRLAEAQRPLGTEISDKRTKLTGRAGALYLFDNGLAP YVSYSESFNPNSYADSAGNPLPPTDGTQWEVGLKYQPPGTDNLFTASLFRIDQENLAS KLPQENFYRAVGAVRSQGLELEAHMQLTDNLKLLGSYTFTDIQYSKSMTSTLSSATNL IENKGNSPTQAPRQMASLWADYKFDSATLDGLRLGGGVRYVGYSWADAENTMKVPAYT LFDASIGYDLGKLGLKGVDVRLNANNLTNESYVASCASLSYCYLGEERNVAATVSYQF " gene complement(132243..133247) /locus_tag="PFL_0126" /db_xref="GeneID:3480720" CDS complement(132243..133247) /db_xref="GI:70733633" /db_xref="GeneID:3480720" /protein_id="YP_257273" /localization_and_confidence="Unknown, Class 3" /product="sigma factor regulatory protein, FecR/PupR family" /translation="MDNFPASLPLKPNPDHLVVKQAINWLLRLRNNGANPKLQQQCDL WRAAHQEHELAWQRVQSLQQELTDNLRSVPGAQVALHTLEHSSQRLGRRQALKLLSGA LLLGSSAWVGKDLLGWQQWNADFATAVGEQRGFQLPDGTRLELNTDSAADLNFNAEQR LIKLRRGEIMVSCGADHGPARPLLVESRHALLEGFDARFVVRVEDRCTRLSVTHGSVA IHAPHTADGRSARVEAGQSYQISHGLAEPAAPLAMDVGAWADGLIVTRNMRLDDFLQE VGRYRHGYLGCSAAVGNLRLSGVFRLEDTDKLLAILPQTLPVQLRYRTRWWVTLGPVA " gene complement(133253..133753) /locus_tag="PFL_0127" /db_xref="GeneID:3480721" CDS complement(133253..133753) /db_xref="GI:70733634" /db_xref="GeneID:3480721" /protein_id="YP_257274" /localization_and_confidence="Cytoplasmic, Class 3" /product="RNA polymerase sigma-70 factor, ECF subfamily" /translation="MSSPEFAVQTLYSHHHGWLNRWLRQRLGNAADAADLAQDTFVRL LQKTERLELKAPRAFLRTIARGLVIDHWRREEIERAYLETIAHLPEAETPGAEARALI LELLESIARMLEGLKPKVRQAFLLAQCEELTHKQIAQQMGLSLRTVERYVAQALYHCY LLRYES" gene 134068..135948 /locus_tag="PFL_0128" /db_xref="GeneID:3480722" CDS 134068..135948 /db_xref="GI:70733635" /db_xref="GeneID:3480722" /protein_id="YP_257275" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="methyl-accepting chemotaxis transducer" /translation="MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLESSI QQAGELTSSSVQNWMSGRILVLENLAQNVAHQGQNADFPGLVDQPAFTSNFQFTYVGQ ANGTFTQRPDAKMPDGYDPRQRPWYKQAVAADKTMLTPPYMAAVGGLVVTIAMPVKKQ GELLGVVGGDLSLETLVKIINSVDFGGLGHAFLVSADGQVIVSPDKDQVMKNLKDIYP GANVRIENGNQEVVLNKQERILSFTPVTGLPNAEWYIGLSIDKDKAYAPLSQFRTSAL IAMFIAVAVIAVLLTLLIQVLMRPLITMGRAMQDIAQGEGDLTRRLVVESKDEFGELG SSFNQFVERIHASISEVSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINE LGAATQEIARNAADASQHASGASEQADDGRQVVEQTIQAMTELSQKISLSCTQIETLN ASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQES AEEIHKMITSLQVGSREAVSTMNASQASSEESVEVANQAGARLVSVTQRIGEIDGMNQ SVAAATEEQTAVVETLNVDINQINLLNQQGVANLNETLKDCDALSQQASRLKQLVDSF KI" gene complement(136014..136778) /locus_tag="PFL_0129" /db_xref="GeneID:3480723" CDS complement(136014..136778) /db_xref="GI:70733636" /db_xref="GeneID:3480723" /protein_id="YP_257276" /localization_and_confidence="Unknown, Class 3" /product="thioesterase" /translation="MYTDTRQWTLVIKPGQATRIRLICFPQAGAAAEQMRVWSSGLAD HIELVVLNLPGHGPRRDEAPCDNWPSLLENTFTALDPWLGEPHALFGHGLGALLAYET SKHAQERFPQQTRHLFVSGCRSPDSLPRRPLLHSLPIAAFREAILTLGASPLEMPRGQ NDLQSYERLLRNGLKLFETWYDTSSGCLDVPLTAFYGSEDPLATANLMLNWREFTGRE FELIEVAGNHFFIKSQRQRLLQVINTHLGLLGDHPA" gene 137069..137761 /locus_tag="PFL_0130" /db_xref="GeneID:3480724" CDS 137069..137761 /db_xref="GI:70733637" /db_xref="GeneID:3480724" /protein_id="YP_257277" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MAARLALSRTLRWFCAALLLAGALLGSLHADWDFSLISRRATAL YGPLGEGQPRIDAWQHLLATQKQVPEREQLKVVNLFFNKNMRYVEDIDLWHQVDYWET PIEALWKGAGDCEDYAIAKYFSLRHLGVSSDKLRITYVKALRQNRAHMVLTYYSSPEA MPLVLDSLEDSIRPASERTDLLPVYSFNAEGLWLPGAKGNKRVGDTKRLSRWQDVLKK MQAEGFPVETTN" gene 137776..139722 /locus_tag="PFL_0131" /db_xref="GeneID:3480725" CDS 137776..139722 /db_xref="GI:70733638" /db_xref="GeneID:3480725" /protein_id="YP_257278" /localization_and_confidence="Unknown, Class 3" /product="GGDEF domain protein" /translation="MSLFKQLLIAICVFLVVAFSGSFMVSLESSRTQYVNQLRSHAQD AATALALSLTPNIDDPAMVELMVSSIFDSGYYASIRVVDLATEKTLVERSGIPEVGNV PQWFVSLIGLEPAGGDAIVSRGWEQAARVEVLSHPMFAVAKLWQSALGSLGWLLICGA VSAVLGALLLRRQLKPLDYMVQQSHAIARREFLSLPQLPRTPELRRVVQAMNQMVEKL KALFQEQAERSEKLRTESYQDSLTGLANRRYFEMQLHARVSNPEQASSGYLLLLRVKD LAGLNQRLGGQRTDQLLKAVGEQLLRECDKYPETHNLVTRVRGGEFAVLAPGLVREEA IQLAQSLDSALGNLHATGATDVASVASIGLAAFAHGDSPQAVLSLGDQALAQAEAQGD TSWACLDQGASAQVGDDHHAWHRLLDRALSEQHFQLYFQPVVAARDTHLVLHYKVLSR LLDEQGQTIPAGRFLPWLERFGWTSRLDLLMLEQVLRQMASHEDCLALNLSAATLADP HALNRVFEILRQHSDLGPRLTLEIGEEQLPEQAMLEQLTRRLRELGFSLSLQRFGGRF SMIGNLARLGLAYLKIDGSYIRDIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGE LQVIREMGLYGVQGQLFGEPAPWG" gene complement(139816..140154) /locus_tag="PFL_0132" /db_xref="GeneID:3480726" CDS complement(139816..140154) /db_xref="GI:70733639" /db_xref="GeneID:3480726" /protein_id="YP_257279" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MFYVQRDAQGQLIRVEAAAYAEATETLPADHHEIQTWYANEAVE VSLKQLKQSDLEMIRVLDDLIQLLTLKGVIRITDLPAAAQAKLMDRTQAREALGGLSR LINDDETGLI" gene complement(140316..155078) /locus_tag="PFL_0133" /db_xref="GeneID:3480727" CDS complement(140316..155078) /db_xref="GI:70733640" /db_xref="GeneID:3480727" /protein_id="YP_257280" /localization_and_confidence="Extracellular, Class 3" /product="calcium-binding outer membrane-like protein" /translation="MSSVVAIVKSIVGQVFVVSPEGIRRVLIEGDRLFVGDQVDTGPA GAVTLELTDGRTLDLGRDTQWSGAAPDSSTDLAQATAQAAPSVAELQQAIAAGADPTT DLEATAAGPTAAGNGGAAGGGHSFVQLEETAGRVDPTIGFPTAGLGLANSTQDNTFGG LTNNGGLGNGNGNGSGSDSLRPATLTLGATPTITEAGGTLVYTATLTQAPLTDLTVTL SNGAVIVISAGQTTGSVQVPLAPQDNVYIDPGQISVSVTGTTGGGGLLVTVNPTPAVT QVTDTIDTTTVSLTADASVTEGGQITYTATLTNPAQTPVTITLSNGSVITIEAGKSSG SIDVPAPANDVYKNGDTIEVGITKAEGGNFENLQPSPDKAVTTVTDSIDDTGLSLSAT DTVAEGGSIVYTATLTNPAGTPVTVTLSNGAVITIAAGATSGTATVAAPADDVYKDAG KVEVTITKADGGNFENLVTDPAPAVTDVTDTIDTSTVSLTATPSVAEGGTVVYTASVT APVTGSPVVVTLSNGQTITIPVGESSASVNFTAPNDALAGGSSLSTTITKADGGNYEK LEISDKPAETSVTDTPDTTTLSVTATDTVAEGGSIVYTATLTNAAGTPVTVTLSNGAV ITIAAGATTGTTTVAAPADDVYKDAGKVEVTITKADGGNFENLETNPTPAVTDVTDTI DTSTVSLTATPNVAEGGTVVYTASVTAPVTGSPVVVTLSNGQTITIPVGESSASVNFT APNDALAGGSSLSTTITKADGGNYEKLEVSDKPAETSVTDTPDTTTLSLSATESVAEG GSIVYTATLTNAAGTPVTVTLSNGAVITIAAGATSGTATVAAPADDVYKDAGKVEATI TKAEGGNFENLETNPTPAVTDVTDTIDTSTVSLTATPSVAEGGTVVYTASVTAPVTGS PVVVTLSNGQTITIPVGESSASVNFTAPNDALAGGSSLSTTITKADGGNYEKLEISDK PAETSVTDTPDTTTLSLSATESVAEGGSIVYTATLTNAAGTPVTVTLSNGAVITIAAG ATSGTATVAAPADDVYKDAGKVEATITKAEGGNFENLETNPAPAVTDVTDTIDTSTVS LTATPSVAEGGIVVYTASVTAPVTGSPVVVTLSNGKTITIPVGESSGSVNFTAPNDAL AGGSSLSTTITKADGGNYEKLEISDKPAETSVTDTPDTTTLSLSATESVTEGGSIVYT ATLTNAAGTPVTVTLSNGAVITIAAGATSGTATVAAPADDVYKDAGKVEATITKAEGG NFENLETNPAPAVTDVTDTIDTSTVSLTATPSVAEGGIVVYTASVTAPVTGSPVVVTL SNGQTITIPVGESSGSVNFTAPNDALAGGSSLSTTITKADGGNYEKLEVSDKPAETSV TDTPDTTTLSLSATESVAEGGSIVYTATLTNAAGTPVTVTLSNGAVITIAAGATSGTA TVAAPADDVYKDAGKVEATITKAEGGNFENLETNPAPAVTDVTDTIDTSTVSLTATPS VAEGGTVVYTASVTAPVTGSPVVVTLSNGQTITIPVGESSASVNFTAPNDALAGGSSL STTITKADGGNYEKLEVSDKPAETSVTDTPDTTTLSLSATESVAEGGSIVYTATLTNA AGTPVTVTLSNGAVITIAAGATSGTATVAAPADDVYKDAGKVEATITKAEGGNFENLE TNPTPAVTDVTDTIDTSTVSLTATPNVAEGGTVVYTASVTAPVTGSPVVVTLSNGQTI TIPVGESSASVNFTAPNDALAGGSSLSTTITKADGGNYEKLEISDKPAETSVTDTPDT TTLSLSATESVAEGGSIVYTATLTNAAGTPVTVTLSNGAVITIAAGATSGTATVAAPA DDVYKDAGKVEATITKAEGGNFENLETNPAPAVTDVTDTIDTSTVSLTATPSVAEGGI VVYTASVTAPVTGSPVVVTLSNGQIITIPVGESSASVNFTAPNDALAGGSSLSTTITK ADGGNYEKLEVSDKPAETSVTDTPDTTTLSLSATESVAEGGSIVYTATLTNAAGTPVT VTLSNGAVITIAAGATTGTTTVAAPADDVYKDAGKVEATITKAEGGNFENLETNPAPA VTDVTDTIDTSTVSLTATPSVAEGGTVVYTASVTAPVTGSPVVVTLSNGQTITIPVGE SSASVNFTAPNDALAGGSSLSTTITKADGGNYEKLEVSDKPAETSVTDTPDTTTLSLS ATESVAEGGSIIYTATLTNAAGTPVTVTLSNGAVITIAAGATSGTATVAAPADDVYKD AGKVEATITKAEGGNFENLETNPAPAVTDVTDTIDTSTVSLTATPSVAEGGTVVYTAS VTAPVTGSPVVVTLSNGQTITIPVGESSASVNFTAPNDALAGGSSLSTTITKADGGNY EKLEVSDKPAETSVTDTPDTTTLSLSATESVAEGGSIVYTATLTNAAGTPVTVTLSNG AVITIAAGATSGTATVAAPADDVYKDAGKVEATITKAEGGNFENLETNPTPAVTDVTD TIDTSTVSLTATPNVAEGGTVVYTASVTAPVTGSPVVVTLSNGQTITIPVGESQGSVN FTAPNDALAGGSSLSTTITKADGGNYEKLEVSDKPAETSVTDTPDTTTLSLSATESVA EGGSIIYTATLTNAAGTPVTVTLSNGAVITIAAGATSGTATVAAPADDVYKDAGKVEA TITKAEGGNFENLETNPAPAVTDVTDTIDTSTVSLTATPNVAEGGTVVYTASVTAPVT GSPVVVTLSNGQTITIPVGESSASVNFTAPNDALAGGSSLSTTITKADGGNYEKLEIS DKPAETSVTDTPDTTTLSLSATESVAEGGSIVYTATLTNAAGTPVTVTLSNGAVITIA AGATSGTATVAAPADDVYKDAGKVEATITKAEGGNFENLETNPAPAVTDVTDTIDTST VSLTATPNVAEGGTVVYTASVTAPVTGSPVVVTLSNGQTITIPVGESSASVNFTAPND ALAGGSSLSTTITKADGGNYEKLEISDKPAETSVTDTPDTTTLSLSATESVAEGGSIV YTATLTNAAGTPVTVTLSNGAVITIAAGATSGTATVAAPADDVYKDAGKVEATITKAE GGNFENLETNPAPAVTDVTDTIDTSTVSLTATPSVAEGGTVVYTASVTAPVTGSPMVV TLSNGQTITIPVGESSGSVNFTAPNDALAGGSSLSTTITKADGGNYEKLEVSDKPAET SVTDTPDTTTLSLSATESVAEGGSIIYTATLTNAAGTPVTVTLSNGAVITIAAGATTG TTTVAAPADDVYKDAGKVEATITKAEGGNFEKLVPNTTPAVTDVTDTIDNSTVSLKAT PSAAEGGNVTYTATVTAPVTGSPVVVTLANGEKITIPVGETTGSVSISAPNDVLVGHT PLTNSITNVSGGNYENLVADKTPVSTTVTDTVDTTSVSLTATGTVAEGGQITYTATLT NAAGTPVTVTLSNGAVITIAAGATTGTTTVAAPADDVYKDAGKVEATITKAEGGNFEK LVPNTTPAVTDVTDTIDNSTVSLKATPSAAEGGNVTYTATVTAPVTGSPVVVTLANGE KITIPVGETTGSVSISAPNDVLVGHTPLTNSITNVSGGNYENLVADKTPVSTTVTDTV DTTSVSLTATGTVAEGGQITYTATLTNAAGTPVTVTLSNGSVIHIEAGKTTGTVTVPA PADDVYIDAGKVNATITNATGGNFEKLVTDTTPAVTNVTDTLDTTSVGISGSASVTEG QTASYTVSLTHPAQTEVTLKISYSGTATDGSDFSGVYTVKIPAGASSATFNVATIDDK ITEGTENFTVKIDSATGGNFENLVVGSNNSVTTSIIDNDAPPVIDLDANNSSGATGAD YKVTFTEGTTGPGVSIADTDLSITDPDSTLLTGATIVLTNRQPGDSLNLGNSVNGITI NANSKDGSITLTLSGSATLADYMQQIKNITFTNNSEDPSTTPRTITVTVTDGGNYSNV ATTTVNVVAVNDAPTATGGAVTGNEDTPLALTWSNFGVSDVDSPASSLGVKITQLPSD GKLQYLDGSTWKDVANNQTFSKADIDAGKLRFTPDANESGTNGYGGNGVGNQQADYAQ IKFQPTDGQALGNTGTVTVDITPVADAPTLSVAGNSVNSVGLLKEVWTNLSGLGTDGS GASASTLKSVIDAAGTPNSSSLATNVQSDGNITPGTASKTSGLIYLEAGKAYTFSGTG DDSLLVTIGGKNVASTTWGAGGNLNGTFTPTTSGYYTIDIYHHNQSGPGSYDVNLSVN GGAAADLSNAGVPLYTGVTDLTNAGVSVSDLHGTNGEGYYDGYKLNEGGEGGSVHLSK ITTGLTDTDGSETLSVKISGIPAGSVLSDGAGHTFTATATSGEANVTGWNLGNLTVTP PPYYNGTFNLNVTSTSTESLGGSASTSAQIPVKVYPAVYNSVVATSGDDTVTGTDGND IVVADIGGLTVVPGTNYNIAFMVDSSGSMSSASITAAKNSLTSVFNTLKNSIGGSSSG TVNIFLADFDTQVNKSVSVNLNDPNALAQLKAVLDSMTSGGGTNYEDVFKATANFFQS SQATGNSNATNLTYFITDGKPTYYQSGEQTNPTLYGNVRLDDVVTTSNYKLGDTFSSY IDNTHYLSVNSSGSVVLQTYTNGWGWSSKTLGTLHAQGDGTYELSNLAGSGSSTDYYT TTNSNSGFALLSGLSNVEAIGINSGVSLNDLKPYDSDGKPQTNIDPNDLANSIIGHTE ATMPGADKVSGGDGNDILFGDLVSFNGVAGEGYQAMQAYVAKQTGVDVSKVTTSNVHQ YITEHYTEFDVSGSHDGNDTLLGGAGNDILFGQGGNDLLDGGKGNDILLGGTGNDTLI GGQGNDILIGGSGADTFVWKAGDTGNDVIKDFKASEGDRIDLRDLLQGESASTIDNFL KITTVDGVSTLQVSSEGKLNAAGGLANADVTIKLEGNNWSNANINSLIAGSDPTIKID HNNS" gene 155440..156792 /locus_tag="PFL_0134" /db_xref="GeneID:3480728" CDS 155440..156792 /db_xref="GI:70733641" /db_xref="GeneID:3480728" /protein_id="YP_257281" /localization_and_confidence="Outer Membrane, Class 3" /product="agglutination protein" /translation="MRFHLFKALPFALAASFVQAQTLPEAMQKALDVHPEIQAGVNSR LAADYQLKAAKGGYLPRVDMLAGYGREGTDNPTTRAGTGSNHWETLNRGESSLRLQQM VFDGFATSSEVGRQQATVNSRAYSLLGTSERTALTVAQVYLDVLTRRQFVQLAEDNLR NHERIYDQIKLRTQRGVGSGADLDQAEARMAQARNNLITEQTNLADAQTNYLSAVGEM PDQLERPASFMALLPANLDEARHQMLENSPILRSAESDIVAAEKQYDAAKSAFYPRFD AELGRTADNDLDGQNGHNNEWQAMLRMRFNLFAGGSNKADLESKAYQSNQALDIRNNA LRVLNEELGLAWNALNNANAQVPIAQQYVDHSTSVRTAYQKQFSLGERTLLDLLDSEN ELFTASRRLAEIQNIQLFTQYRIKATMGELLKSQGVVAPMASVVQSDVKPKVQLPGMN " gene 156831..158984 /locus_tag="PFL_0135"