LOCUS NC_009439 5072807 bp dna circular UNK DEFINITION Pseudomonas mendocina ymp, Chromosome, complete sequence. ACCESSION NC_009439 COMMENT Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. Class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known). Class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene. Class 4: Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences. COMMENT Subcellular localization confidence: Class 1: Subcellular localization experimentally demonstrated in same species. Class 2: Subcellular localization of highly similar gene experimentally demonstrated in another organism. BLAST expect value of 10e-10 for query within 80-120% of subject length. Class 3: Subcellular localization computationally predicted by PSORTb V2.0. FEATURES Location/Qualifiers source 1..5072807 /db_xref="taxon:399739" /mol_type="genomic DNA" /strain="ymp" /organism="Pseudomonas mendocina" gene 82..1566 /locus_tag="Pmen_0001" /db_xref="GeneID:5105694" CDS 82..1566 /db_xref="GI:146305043" /db_xref="GeneID:5105694" /protein_id="YP_001185508" /localization_and_confidence="Cytoplasmic, Class 3" /product="chromosomal replication initiator protein DnaA" /translation="MELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRF VLDWVNEKYLSRLLELLGERAGGLVPALSLLIGSKRAATARVAPTAPLPAAARAAQVQ AAATASKPVPPPAQEEPSRASFDSMAGAAPQPPTPAVAPRAERTVQVEGGLKHTSYLN RTFTFDNFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLA KNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAKKERSQEE FFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILM KKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKD LLALQDKLVSIDNIQRTTAEYYKIKISDLLSKRRSRSIARPRQVAMALSKELTNHSLP EIGVAFGGRDHTTVLHACRKIAELRESDADIREDYKNLLRTLTT" gene 1601..2704 /locus_tag="Pmen_0002" /db_xref="GeneID:5106313" CDS 1601..2704 /db_xref="GI:146305044" /db_xref="GeneID:5106313" /protein_id="YP_001185509" /localization_and_confidence="Cytoplasmic, Class 3" /product="DNA polymerase III, beta subunit" /translation="MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSL TGTDLEVELVGRVTLEDAAEPGEITVPARKLMDICKSLPSDALIDIRVDDQKLLVKAG RSRFTLSTLPANDFPTVEEGPGSLTFNLPQAKLRRLIERTSFAMAQQDVRYYLNGMLL EVQSGMLRAVATDGHRLAMCSMEAAIQQDGKHQVIVPRKGILELARLLTEQDAEVAIV LGQHHIRANTGEFTFTSKLVDGKFPDYERVLPRGGDKLVLADRQGLREAFSRTAILSN EKYRGIRLTLAAGLLKIQANNPEQEEAEEEIVVDYAGGGLEIGFNVSYLLDVLGVMGT EQVRLILSDSNSSALLQEADNDDSAYVVMPMRL" /EC_number="2.7.7.7" gene 2712..3815 /locus_tag="Pmen_0003" /db_xref="GeneID:5106678" CDS 2712..3815 /db_xref="GI:146305045" /db_xref="GeneID:5106678" /protein_id="YP_001185510" /localization_and_confidence="Cytoplasmic, Class 3" /product="DNA replication and repair protein RecF" /translation="MSLSRIMVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIH LLGLARSFRSTRLQPVIHYEQPACTVFGQVQLAEGGSSNLGISRDRQGELQIRIDGQN ARSAAQLADLLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEHRFLGAWQRLQKALR QRNSWLRHGTLDGASQAAWDRELCSASQEIDTYRRAYIQALKPVFERTLAELLQLEGL TLSYYRGWDKDRELSEVLASSLLRDQQLGHTQAGPQRADLRLRLAGHNAAEILSRGQQ KLVVCALRIAQGHLVNEAKRGQCIYLVDDLPSELDEQHRQALCRLLEDLHCQVFITCV DHELLREGWHTDTPVAMFHVEHGRITQTQDHRE" gene 3820..6240 /locus_tag="Pmen_0004" /db_xref="GeneID:5106679" CDS 3820..6240 /db_xref="GI:146305046" /db_xref="GeneID:5106679" /protein_id="YP_001185511" /localization_and_confidence="Unknown, Class 3" /product="DNA gyrase, B subunit" /translation="MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFE VVDNSIDEALAGYCSEIVITIHPDESISVRDNGRGIPVDIHKEEGVSAAEVIMTVLHA GGKFDDNTYKVSGGLHGVGVSVVNALSEELRLTIRRAGKVWEQIYHHGVPQAPLATVG DTDGTGTEIHFKASAETFSNIHFSWDILAKRLRELSFLNSGVGILLRDERSGKEELFK YEGGLKAFVEYLNTNKNVVNQVFHFNIQREEDGVGVEVALQWNDSFNENILCFTNNIP QRDGGTHLAGFRSALTRHLNNYIEQEGLAKKFKVATTGDDAREGLTAIISVKVPDPKF SSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKARE MTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKTQAILPLKG KILNVEKARFDKMLSSAEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHI RTLLLTFFFRQLPELIERGYVYIAQPPLYKVKKGKQEQYIKDDEAMDEYMTQSALEDA SLHVNENAPGLSGGALEKLVGEYRGVMKTLDRLSRVYPKEITEHFVYLPRIGLEQLAD HAGMQAWLEQFSARLKTMEKSGQTYTASLREDRERHVWLPEVEVKAHGLSSYTTFNRD FFASNDYKTVTALGDQLNNLLEDSAYVQRGERKKPVATFKEALDWLMAESTKRHSIQR YKGLGEMNPDQLWETTMDPEVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNA LAVSNLDF" /EC_number="5.99.1.3" gene complement(6506..7438) /locus_tag="Pmen_0005" /db_xref="GeneID:5106680" CDS complement(6506..7438) /db_xref="GI:146305047" /db_xref="GeneID:5106680" /protein_id="YP_001185512" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="phosphatidate cytidylyltransferase" /translation="MDRNTLLLFAGIGALLLLASLVGFVLKRRSGDQPNPVIDNLNAR INAWWVMVLVIGIAFLFGNIGVVVLFYFVSFYALREFMTLTPTRRSDYPALVAAFYFA LPMQYLLIALDWYGLFAIFIPVYLFLLLPILASLGGDTTRYLERAAKAQWGLMIAVYC ISSVPALLTLDIPGYEGRNLLLIAWLIIVVQLSDVLQYVCGKLFGKHKIAPSLSPSKT VEGFVGGVALATLIGGLLCWITPFAFWQAALFALLVCLLGFAGGLVMSAIKRDRGVKD WGHMIEGHGGMLDRLDSVCFAAPVFFHMVRYWWA" gene complement(7440..8063) /locus_tag="Pmen_0006" /db_xref="GeneID:5106681" CDS complement(7440..8063) /db_xref="GI:146305048" /db_xref="GeneID:5106681" /protein_id="YP_001185513" /localization_and_confidence="Unknown, Class 3" /product="phospholipid/glycerol acyltransferase" /translation="MLAALTAFAITSAARLLTGARALWLGSTAQATQRLYYANHSSHG DFVLLWASLPPELRKRTRPVAGADYWQKPGVRSFLINNVFNGVLVDRERKEAGVNPLQ AMLDALDGGDSLIIFPEGTRNLGDEPLLPFKSGLYHLAQARPEVELVPVWIANLNRVM PKGRALPLPLLCTLSFGAALERIEGEGKEAFLERARNALLALAPEEA" gene complement(8073..8507) /locus_tag="Pmen_0007" /db_xref="GeneID:5106682" CDS complement(8073..8507) /db_xref="GI:146305049" /db_xref="GeneID:5106682" /protein_id="YP_001185514" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="hypothetical protein" /translation="MQADLLLVAALLRRGRSLDHFSSALSLVAVIFGLAPWLGAPPSL MLALLCAALLILGLAEKYWALRVALDAELFQRLAEAGEQLDGQTHALDQARQKLGLQN AQLAGRDWSLRAQGALGLLRKQALCLLLQSVIVVLGFFIVFA" gene complement(8497..9834) /locus_tag="Pmen_0008" /db_xref="GeneID:5106683" CDS complement(8497..9834) /db_xref="GI:146305050" /db_xref="GeneID:5106683" /protein_id="YP_001185515" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="dual specificity protein phosphatase" /translation="MDNTREQGLWKRGVLWLLLLGPLFFASYGFANWLTGQRDDVGSL VFAWEPQIPLWPWTIVPYWSIDLLYGLSFLLPACRREMDRHALRLLAAQVICVACFLL WPLRFTFERPPLDGAFGLMFDVLMGFDKPFNQAPSLHITLLVIIWAMFANHTRGPFWR GLLHGWMALIGISVLTTWQHHFIDLPTGALAGFFCLWLLPLQGATPLTQMRLTSDPRR WRLALRYGLGATLSAVLAVKLGGAWLWLFWPTVALAMVALNYLLFDAAGFQKQANGRL SPAATALLAPYLLGAWINSRLWTYRQPMPSQVVEGIHLGRLPATGELGSYAAMVDLCA ELPLLRTPSAYCSLPSLDLVTPDALTCQRAAEAIERLRHEGPLLVCCALGYSRSATAV AAWLLHSGRCQSVDAAVALIRQARPQVVLGPQHLAALQGMLVASPALEVAHAG" gene complement(9834..11588) /locus_tag="Pmen_0009" /db_xref="GeneID:5106684" CDS complement(9834..11588) /db_xref="GI:146305051" /db_xref="GeneID:5106684" /protein_id="YP_001185516" /localization_and_confidence="Cytoplasmic, Class 3" /product="alpha/beta hydrolase fold" /translation="MRPVQLHTFTTHDGVELSYCHWPATVPADGSRQAVVLFHRGHEH GGRMAHLVDELELPHCDFFAWDARGHGLSPGARGDSPSFATSVRDVQTFIEHIGSAHG IAEEDLSVVAQSVGAVIVSTWAHDYAPKVRCLVLASPAFKVKLYVPFARPGLKLLHAW RGNFFVNSYVKARFLSHDPERIASFENDSLIARPISVTMLLGLYEAAERVVADAQAIQ VPTQLLISGADFVVHRKPQEDFFERLGSLRKEKHLLPGFFHDTLGERDRAHALSRARR FILRNFEEPVTRPSLLDADRLGATCAEAEALAAPLPRNSLRDLYWRATRAGMRLGSTL SAGVKLGFDTGFDSGSTLDYVYRNQPTGKGALGRLIDANYLDSIGWRGIRQRKLHAEE LLRLAMTRLRETGRAVRIVDIAAGHGRYILESLEGQQQRPDSILLRDYSDINVRDGNA LIEQKGLADIARFVKGDAFDREDLAALEPKPTLAVVSGLYELFGSNQMVGDSLAGLAA AVEEGGYLVYTGQPWHPQLELIARALTSHRDGQAWVMRRRSQAEMDQLVEAAGFRKVA QRIDQWGIFSVSLAQRVK" gene complement(11614..12219) /locus_tag="Pmen_0010" /db_xref="GeneID:5106685" CDS complement(11614..12219) /db_xref="GI:146305052" /db_xref="GeneID:5106685" /protein_id="YP_001185517" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="CDP-alcohol phosphatidyltransferase" /translation="MPSIYQLKPAFQNLLRPGVERLYARGVTANQVTLAAALISVLLG VLLAAFSHVVWLFALIPLWMLLRMALNAVDGMLAREFGQQSKLGAYLNELCDVVADSA LYLPFALLPGVSPLLVVTVVLLAVISEYAGVLGPMIGASRRYDGPMGKSDRAFCFGVL GAGVATGLLPALWINLLLALILVLLLYTLYNRVRQGLAEAA" gene complement(12430..13197) /locus_tag="Pmen_0011" /db_xref="GeneID:5106686" CDS complement(12430..13197) /db_xref="GI:146305053" /db_xref="GeneID:5106686" /protein_id="YP_001185518" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="phospholipid/glycerol acyltransferase" /translation="MAILQALRITLFYLLLSSSSFFWCLISLVVAPFLPFRQRYRFVV QAWCSCAVWLARVIVGIRYEVRGLENIPERPCVILANHQSTWETFFLSSYFEPLSQVV KRELLRVPFFGWGMALLKPIAIDRSNPKAALKQLAKQGEERLKQGAWVLVFPEGTRIP PGQIGKFSRGGTSLAVNAGLPVLPIAHNAGEFWPKAGWGKRPGTIQVIIGQPMYAEGE GPRAIAELNERAFQWVCRQQTELRGEEPQLSRLSEPV" gene complement(13211..13741) /locus_tag="Pmen_0012" /db_xref="GeneID:5106687" CDS complement(13211..13741) /db_xref="GI:146305054" /db_xref="GeneID:5106687" /protein_id="YP_001185519" /localization_and_confidence="Unknown, Class 3" /product="histidinol-phosphate phosphatase family protein" /translation="MKLLILDRDGVINEDSDAYIKTLDEWIPIASSITAIARLSQAGW TVAVATNQSGIARGYYDLATLESMHARLRELVGEQGGEVGLIVYCPHGPDDGCECRKP KAGMLRQIAAHYGTDLAGIWFVGDSSGDLQAALAVDCQPVLVKTGKGERTLAKPLPPG TLVFDDLAAVADQLLS" gene complement(13811..15865) /locus_tag="Pmen_0013" /db_xref="GeneID:5106688" CDS complement(13811..15865) /db_xref="GI:146305055" /db_xref="GeneID:5106688" /protein_id="YP_001185520" /localization_and_confidence="Cytoplasmic, Class 3" /product="Glycine--tRNA ligase" /translation="MSAKDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLNYAA SRVYAAPRRLAVLVEQLEEQQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVDI AEIDRSGAKLRFAQHIPGQPAVNLLPTIVQDSLNDLPIPKRMRWAARRDEFVRPTQWL VMLFGDAVVDCEILAQKAGRVSRGHRFHANREVRISSPANYAEDLRSAYVLADFAERR EIISRRVDELAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTM QDNQKYFCLLDAGGKLLPRFITVANIESKDPAQIVSGNEKVVRPRLTDAEFFFKQDKK QKLEGFNQRLANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDEARAARAGLLSKCDL ATEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPSTLTGAAVAVA DKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDFAVAQYAG KVKSDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQAVQAFR KLPQAEALAAANKRVSNLLSKAEGGVAAQVEAHYFDNPSEFALHAAIQQADQAVQPLA AARQYNEALAKLASLREPVDAFFEAVLVNAEDARVRANRYALLARLRGLFLGVADISV LG" /EC_number="6.1.1.14" gene complement(15862..16809) /locus_tag="Pmen_0014" /db_xref="GeneID:5106689" CDS complement(15862..16809) /db_xref="GI:146305056" /db_xref="GeneID:5106689" /protein_id="YP_001185521" /localization_and_confidence="Cytoplasmic, Class 3" /product="Glycine--tRNA ligase" /translation="MSQNKPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHT ATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLG SLKAIGLDPEVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYP VTGEITYGLERLAMYLQGVDSVYDLIWTDGPFGTVTYGDVFHQNEVEQSTYNFEHANV EKLFELFDFYESEANRLIELELPLPTYEMVLKASHTFNLLDARRAISVTARQQYILRV RTLARAVAQSYLQARAKLGFPMATPELRDEVLAKLEAQA" /EC_number="6.1.1.14" gene 17057..17623 /locus_tag="Pmen_0015" /db_xref="GeneID:5106690" CDS 17057..17623 /db_xref="GI:146305057" /db_xref="GeneID:5106690" /protein_id="YP_001185522" /localization_and_confidence="Unknown, Class 3" /product="DNA-3-methyladenine glycosylase I" /translation="MPRCFWCTDDPLYQAYHDEEWGVPQRDARQLFEMLLLEGAQAGL SWITVLKKRERYRQVLHGFDPERLARLSDEEIEALMQEPGIIRNRLKLKAVRQNAQAW LKLEDPVSWLWSFVGGAPKINHFSDRSQMLAVTPEAEAMSKALRKAGFNFVGPTICYA FMQATGMVMDHTTDCDRYPELSGSAATA" /EC_number="3.2.2.20" gene 17672..18604 /locus_tag="Pmen_0016" /db_xref="GeneID:5106691" CDS 17672..18604 /db_xref="GI:146305058" /db_xref="GeneID:5106691" /protein_id="YP_001185523" /localization_and_confidence="Unknown, Class 3" /product="lipid A biosynthesis acyltransferase" /translation="MAGTMPAFHATLESFVEAFKGRLVVGFLRLFALLPWRAVQAVGN AIGWLMWKLPNGSRDVVRINLSKCFPELNQAELDRLVGQSLKDIGKTLTESACAWIWP AQKSLKLIREVEGLEVLQQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPK LKAVDELLQQQRVQMGNRVAPSTKEGILSVIKEVRKGGAVGIPADPEPSRSAGVFVPF LGTTALTSKFVPGMLTGGKAVGVFLHALRLPDGSGYKVILEAAPEGMYSENVEEGVAA MSEVVSRYVRNYPSQYMWSMKRFKKRPDGEAKWY" gene 18721..18987 /locus_tag="Pmen_0017" /db_xref="GeneID:5106692" CDS 18721..18987 /db_xref="GI:146305059" /db_xref="GeneID:5106692" /protein_id="YP_001185524" /localization_and_confidence="Cytoplasmic, Class 3" /product="type IV pilus assembly PilZ" /translation="MSNQRHQVRTPMKCRIKISHPSFGELVAQTRDLSDSGVYVKHPD MTSLTVGAEVTGQVQDLPFPAPVLKMEVVRVDSEGAGLRFLDED" gene 19365..19931 /locus_tag="Pmen_0018" /db_xref="GeneID:5106693" CDS 19365..19931 /db_xref="GI:146305060" /db_xref="GeneID:5106693" /protein_id="YP_001185525" /localization_and_confidence="Cytoplasmic, Class 3" /product="NLP/P60 protein" /translation="MQCLDSEGLPRKGQSPGSLGLNKFFMSLCLAGALLLGICTQASA TFRIHTIPATAPAAEPKPASEVIDRALAALGTPYRWGGSSLRHGFDCSGLVQYAFKTQ EDLELPRTSRALSRLDAPSVKSSDLQPGDLLFFRIRSRSVDHVAIYIGEGRFVHAPRR GTKVRIDRLNDAYWQRHFQLAKRVVSQA" gene 20108..20545 /locus_tag="Pmen_0019" /db_xref="GeneID:5106694" CDS 20108..20545 /db_xref="GI:146305061" /db_xref="GeneID:5106694" /protein_id="YP_001185526" /localization_and_confidence="Unknown, Class 3" /product="Tir chaperone family protein" /translation="MPSAAYCRLVDDLCQLALLPNPKALYERTALTVGKVNFSLVERS GDPYSEVLIYTDLGPLPSQRRDAVLLRLLDINFHLFVGAGSPSCSYNSETQRLMLGVS LLLQAATGQRLLALLGQLADMAHNWRDDHFLERPSPRHAQVRL" gene 20545..22776 /locus_tag="Pmen_0020" /db_xref="GeneID:5106695" CDS 20545..22776 /db_xref="GI:146305062" /db_xref="GeneID:5106695" /protein_id="YP_001185527" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MDRIHQPSSASAHGVGHSPSPSVTGARPASPVSQPSVTVASEAP LQGRQAERAARPQSALERYESTFPTLRELRQKAQREAARQADTDRPAYHPLEAAKRRM LIEGELLRAHPSLSLQQASEILNMGHVEQLASPIPYGDSLEKLATALDQLFAPGLQDE LPSLVQLGAILDQGLGEISRHLEGQLDLYRQVLQHTLLDDTERAQVKAGQQALQAMAE RWTEDIKGKVLGKAQALAESRLQDQQRAQQQSPDQMEVQTRQWQNIRDYLKSAQDAFD TQGEFGTALQHVRLDSQVEAMNASNQGLFSAMRSFMANGVPPGIASTLLYVMARAYVS PQLAGAEFVARALGSGMAIGAVHETLDNFAKPAAREVLASLGMTELREVDPSEVIPDP PRAVIVEGRYQERDAGQMAEAQAEVEQARKAFLNAQQDYKTGTLKGDAITLTSLPGAQ AARELVNLLSSQNAASTGAMALAAFLGNAGMYGLQAMGQRQKTFSHEGHDLPTHVPKP APQEALGRRLGNVLKDGLSTINPLDASVRQKYDSKGWSAALGMMGYNSVEGSIRQLDT STTGGMASSVILTGLQTFLMQQVFYANKPAGDEAEAGGTGRFDNALNNIRDPDRETLP HGSRPGTTERRIENTYDRLRGVIQGPPQAATEITEAVTSTVVSGLGQLGRQVAEQASR QQQRLASEVSTRVFNTLAGGLEHVGRQVAEQAMRQRDRFRAAEPPGDIEMGLQAPRDR DNV" gene complement(22972..23322) /locus_tag="Pmen_0021" /db_xref="GeneID:5106696" CDS complement(22972..23322) /db_xref="GI:146305063" /db_xref="GeneID:5106696" /protein_id="YP_001185528" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MKQVSQKLAFYEHVAAERSAVWPVASGVTFVSRREHQDWGIALH VESLAMSPEQLRNALERRFVESDRYSDYFLFLNVQQDFVVWHASPDVEGVGDSLDDIC REQLQLAGLGHLQS" gene complement(23325..23528) /locus_tag="Pmen_0022" /db_xref="GeneID:5106697" CDS complement(23325..23528) /db_xref="GI:146305064" /db_xref="GeneID:5106697" /protein_id="YP_001185529" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MTIRSLTVLLALSLLAGCASKIGCSGYACERPDSTNRALVIWWP EDMRQGLNDRDPARDYTVVPLKD" gene complement(23528..25618) /locus_tag="Pmen_0023" /db_xref="GeneID:5106698" CDS complement(23528..25618) /db_xref="GI:146305065" /db_xref="GeneID:5106698" /protein_id="YP_001185530" /localization_and_confidence="Outer Membrane, Class 3" /product="type III secretion outer membrane pore, YscC/HrcC family" /translation="MRNTLISLSWLLWLVSIPAHAVPPESWKQTAYAYDARQTDLNSA LADFAREFGLSLDMPPMDGIVDGRIRASNPQEFLERLGREYQFQWFVYNETLYISPTR EQTSARIEVSPDAVDDLENALTAIGLLDPRFGWGTLPEEGLVLVRGPAQYVQFIREYS QKVEEPEKAEKQDVIVFTLKYANAADRSIRYRDQELRVAGVASILRELLETRSRGEPI SGVGIFQPSGTTQGLAPTRPMGLPYAGMSGLDGGLLEQGLDNVLGLAQSSSRKRSESR SRSQIRVSADVRNNAVLIYDLPERKAIYQGLIQQLDVPRNLIEIDAVILDIDRNELAE LSSRWAFNSGSVSGGANLFEPGTTSTLFIQDAGRFAAELRALEGTGAASIMGNPSILT LENQPAVIDFSRTEYLTALAERVANIQPITAGTSLQVIPRSLNQGSRSQVQLIVDIED GQIIESNISEEQPSVRRGNVSTQAVIAEHGSLVIGGFHSLEANDRINKIPLLGDIPVI GKLLFQSRNREFNRRERLFILTPRLIGDQVNPARYVQHGNPHNLDRQLREIDERRRGT ERPSRGDIEHAFTQLLDGIHPSGFDSAPLPLRAETLCNSDHGLTLDAERSQWFARDGW GVAVVVARNDTAQPIRIDESRCGGRWAMGVSAWPRAWLQPGEESEVFIALRQPQSLQK TGQGRTSLLHRSTP" gene complement(25620..26045) /locus_tag="Pmen_0024" /db_xref="GeneID:5106699" CDS complement(25620..26045) /db_xref="GI:146305066" /db_xref="GeneID:5106699" /protein_id="YP_001185531" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MEFSEFSDVIAQWCEASALPLDCWIDDANARLAEMGGGVRCSLE VLNPFEASDQQRLQAVLSQGGAGLACACDGAFAIDPDTHALVLVNWHRAPCSVDQLLA SLERLANQRAALISLLHVSIREAALIAPQPSFNALHPGV" gene complement(26032..26256) /locus_tag="Pmen_0025" /db_xref="GeneID:5106700" CDS complement(26032..26256) /db_xref="GI:146305067" /db_xref="GeneID:5106700" /protein_id="YP_001185532" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MSSLEALRNRLDRAQESAVRNKDDALLQAAESADINDMHAYNEA ARKAQLVSTVVSEELRAQHGLTKAIIDGIQ" gene complement(26417..27004) /locus_tag="Pmen_0026" /db_xref="GeneID:5106701" CDS complement(26417..27004) /db_xref="GI:146305068" /db_xref="GeneID:5106701" /protein_id="YP_001185533" /localization_and_confidence="Cytoplasmic, Class 3" /product="type III secretion apparatus protein, HrpE/YscL family" /translation="MLTKRRFTLGSAVLEEPILRRQLLAESLRADELLAQARLQAEQL LQQAHEQRQHYLDEAVARFWSEANALLQAIQEERASYQRDALSAVDSLLNIALSRLLD ETDLPQRISALLRNLVVGLPSKAEANLACHPEAASTVRAWLQTMGFDALWQVQEDPGM APESLRLSNTLGTFHIDWPSLRRGLIPSLPEARHA" gene complement(26994..27527) /locus_tag="Pmen_0027" /db_xref="GeneID:5106702" CDS complement(26994..27527) /db_xref="GI:146305069" /db_xref="GeneID:5106702" /protein_id="YP_001185534" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MSDAAERWVRWWCEAWHFAHPGWRRSSPVLAAAADCSHSRHAAL AQSLGIGATQPPPPHEGVLQWLALNERQRQHALALAQHICSAKAPCQALPADADWCRS LGKALRPGLWLTAEATDPRLLLGAWAGPACWERLRLQWAPGSLEELPPDLPARRLATL WAAVLWRTSQMERTRAD" gene complement(27524..28342) /locus_tag="Pmen_0028" /db_xref="GeneID:5106703" CDS complement(27524..28342) /db_xref="GI:146305070" /db_xref="GeneID:5106703" /protein_id="YP_001185535" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="type III secretion apparatus lipoprotein, YscJ/HrcJ family" /translation="MKWTLSIVALCLLLLSGCSDRTDLFSGLSELDANEVIASLGEHR ISARKRAEKAGVVVTVDTAEINRAVRVLEAAGLPRRARTSLGEIFKKEGVISTPLEER ARYIYALSQELESTLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHAASLEPD AVQRRIQQMVVSSIPGLASTGVESSEKFSIVFVPAAELQDADTLVPFGPFLIESQKLG FWQLMSWLIPLGGLLLLAVLTLLVRQDWRSVLLRRVRPRQPASHNVSTLPSRVA" gene complement(28353..28721) /locus_tag="Pmen_0029" /db_xref="GeneID:5106704" CDS complement(28353..28721) /db_xref="GI:146305071" /db_xref="GeneID:5106704" /protein_id="YP_001185536" /localization_and_confidence="Unknown, Class 3" /product="type III secretion apparatus protein, YscI/HrpB family" /translation="MSISKIDGLTSPDLKLDQGLVSEPSQADVDLFSSLMRDNGNTAD QPSHLAAVIAETVNARMTSVDDLSRQAMRHMKEAVTGNDVSAITDMSRALSQYSLQMA VTTKVVSKTGQALEKLTNMQ" gene complement(28765..29664) /locus_tag="Pmen_0030" /db_xref="GeneID:5106705" CDS complement(28765..29664) /db_xref="GI:146305072" /db_xref="GeneID:5106705" /protein_id="YP_001185537" /localization_and_confidence="Unknown, Class 3" /product="HrpZ family protein" /translation="MNMISNMPGLVAGNFSNFSIGSQSNSERPQNMDQVVDKLADMLK GSDLSSSPLGQMVKDKLDDSGGLMGILKKGGMENAVKDALKDIISEKLGDNFGAAQSF GLGNGSGTGGAGGAGGGQQPDLLERVLSGLAKSSLDDLLGKQGEGTKFSNKDMPMLEE IAKFMDDPRSGIKPPDSGSWANELKEDNYLNKEETAAFRAALDQVGGALDQKASGQPS GMPGGLGMPGNAGQNMLGGEGGLGGSGTGSAAGNPLQQLNDLIQGLQGLASQLSLQNL ASSAMDTANALVGAMLPNNSRTA" gene complement(29716..30009) /locus_tag="Pmen_0031" /db_xref="GeneID:5106706" CDS complement(29716..30009) /db_xref="GI:146305073" /db_xref="GeneID:5106706" /protein_id="YP_001185538" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MAMDPINGGMQLFNQATSSLNMNNNIADAAGDSKSSKAMEDAMA RSDASSARMIDLQSRHAEKMKVENTLQAMQSAEDDAANKKISSTAQNAKGISY" gene complement(30305..31210) /locus_tag="Pmen_0032" /db_xref="GeneID:5106707" CDS complement(30305..31210) /db_xref="GI:146305074" /db_xref="GeneID:5106707" /protein_id="YP_001185539" /localization_and_confidence="Cytoplasmic, Class 3" /product="sigma54 specific transcriptional regulator, Fis family" /translation="MSEFDWPDAFWMNDGGLPNLEVVASSISELNIDVLLTGETGSGK DTLAQYLHKLSGRKGPFVAMNCAAIPESLFESELFGVTSGAYTGADHSRMGYVEAAQG GTLYLDEIDSMPAFLQAKLLRVLETRQIERLGSTTPVPLDICVVASAQRSLDALVEQG EFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAFEASQDMDTALPVIDPAIEHVLL NHDWPGNLRELKSAAKRHVLGINLLGIEAEQPIECDLKCQLRLIEKVLIQESLQRHEH CIEAVLHELDIPRRTLYHRMKELDV" gene complement(31594..32523) /locus_tag="Pmen_0033" /db_xref="GeneID:5106708" CDS complement(31594..32523) /db_xref="GI:146305075" /db_xref="GeneID:5106708" /protein_id="YP_001185540" /localization_and_confidence="Cytoplasmic, Class 3" /product="sigma54 specific transcriptional regulator, Fis family" /translation="MSRGVAAEKSARRHGGTDVPELGITLSAGHFRMDLLLCGETGTG KDVLARHIHDLSGRTGAFVGINCAAIPEALAESQLFGVASGAFTGANRSRQGYIEASN DGTLYLDEIDSMPLQLQAKLLRVLETRGVERLGTTKFIPLNLRIIASTQRPLEELVEQ GLFRRDLLFRLNAMTLSLPPLRQRRELILPLFKRFTRSLGAKQANGAQALDSQLIQLL LSHPWPGNIRELKSAAKRYVIGLPPIDAGVLADLEDGDFPHDRGLKKRMRAVEKMLIQ DALKRHKNGLEAVAEELGISRRTLYQRIKELDV" gene complement(32882..33268) /locus_tag="Pmen_0034" /db_xref="GeneID:5106709" CDS complement(32882..33268) /db_xref="GI:146305076" /db_xref="GeneID:5106709" /protein_id="YP_001185541" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MPTTHMRPAEHGRSLREEEWLKNDQAIDQGRYSSIALTGSFEHQ HLAQSDGQLAAAAQEYPRRCKGVRCKIAEPSLTSAKPAKCNHGFCKKAGRVLFCFNPA IAFRHRHIPLVVFYLSNQTITAHLLG" gene complement(33299..35920) /locus_tag="Pmen_0035" /db_xref="GeneID:5106710" complement(33299..35920) /db_xref="GeneID:5106710" /product="" gene complement(33458..35032) /locus_tag="Pmen_0036" /db_xref="GeneID:5106934" CDS complement(33458..35032) /db_xref="GI:146305077" /db_xref="GeneID:5106934" /protein_id="YP_001185542" /localization_and_confidence="Unknown, Class 3" /product="transposase IS66" /translation="MIAVPAPLPDDPILLKHLLLLASEQAAAKDARIEQLQEQVALLR HKLFSPKSERSPEDADSPQLAMFNEVEELIEAAAAPSEAEAEAEAEAEAEAEEIVAPV KRRGKRKPLPANLPRVEVIHDLPEHELTCACGACKQVIGEETSEQLEIIPMQVRVIRH IRKTYACKACEAAPLTADKPAQLIEKSLASPSVLAMLLTTKYADGIPLYRFEKMLSRH GVDIPRQTLARWVIQSGEQLQPLLNLLRDKLLEYPVLHCDETRLQVLHEPGRDPTAQS WMWVQSGGPPDKPVILFDYTASRAQEVPLRLLDGYRGYLMTDDYAGYNAVAAQEGIER LGCWAHARRKFVEAQKVQPKGKTGRADMALNLINKLYGIERDLKDACDTERLVARQQR SQPLLDQLKTWLDKTQPQVVGQTALGRAVNYLASNWRKLVRYVEGGHLPIDNNRAENA IRPFVIGRKNWLFSDTPKGATASAQIYSLIETAKANGQEPYAWLRHILERLPAANSVE DYEALLPWNCSPVSAS" gene complement(35052..35411) /locus_tag="Pmen_0037" /db_xref="GeneID:5106711" CDS complement(35052..35411) /db_xref="GI:146305078" /db_xref="GeneID:5106711" /protein_id="YP_001185543" /localization_and_confidence="Cytoplasmic, Class 3" /product="IS66 Orf2 family protein" /translation="MMRPDAKVQKVYLYPKPVDFRKSINGLAALVELDIKVEVFNPVL FVFLNRTRSQVKILYWERNGFCLWLKRLEAERFKTKPDAGDEAIELTVDELNWLLDGI DLWRNRPHQILTPRFVT" gene 36171..37328 /locus_tag="Pmen_0038" /db_xref="GeneID:5106712" CDS 36171..37328 /db_xref="GI:146305079" /db_xref="GeneID:5106712" /protein_id="YP_001185544" /localization_and_confidence="Unknown, Class 3" /product="type III secretion effector delivery regulator, TyeA family" /translation="MIRPIPNASSILHIPSVARAASPATPLAQVRSGAATTTGTSAQQ ASKFAAALVQNSRELGRRDLFAKINALQSQASKQHELAHLLLATHERGMEESARALRK TLKNGQLLRMERGKLLKQIVDSMAGDAAKAHALLQAAARQAKGEKSLNEQQALNQQLQ LLRQQHGRNPRPLFNTGNNTRILARGGEDPQRRDKLRSLYSVAVTEQLNVVGLIEALL NSTQDDGQKDGREGFEAVLREIRQVVARDMAELDGSASPQKLRTMMYAMSTAQYVATL FGGCEHLLGRMRNKNPAMQVETSAFLKNLLGLIGKGMALNDTLQLTQQIGGRQLKHQL AFLNGLRPMLHQLPIMLWRDIKSRQNALGNLLSLMAALTSEEQKRLKEGIA" gene 37328..39412 /locus_tag="Pmen_0039" /db_xref="GeneID:5106713" CDS 37328..39412 /db_xref="GI:146305080" /db_xref="GeneID:5106713" /protein_id="YP_001185545" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="type III secretion protein, HrcV family" /translation="MGAVIDFLNGIALAAMRRSEIVGAFVVIAIIFMMITPMPTELMD VLIAINICISCLMIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTTRLILLEQDAG HIVEAFGEFVVGGNLAVGVVIFLILTIVNFLVITKGSERVAEVGARFTLDAMPGKQMS IDSDLRANLISVSEARNRRAELNKESQLFGAMDGAMKFVNGDAIASLIIIAINMIGGM AIGVAQMGMSAGDALQVYTILTIGDGLVSQIPALMISVTAGIVITRVPNEQRQQTNIG REIAEQLTSQPKAWIIASVAMLGFAALPGMPTLTFIIIAIICGCGGLLQLQRARTSSA AEDDPEVIPPEMNGQEDLRTFSPSRQFVLQFHPSQDAHQVAALLSEIRQRRNRLVVQY GLTLPSFIIEQSPLLPPDEFRFSVYEVPLFKATLTQSQLAVPARSLPPGAVCGSNERQ EEDWVWMPADDPMLQNDELEIVSAATLIVERMERAMQACGPQFIGLQETKAILGWLES EQPELAQEMQRVLPLARFSAILQRLAAECVPLRSVRLIAETLIEHAQHERDVTVLTDY VRIALKSQIYHQYSSAEGLLVWLLTPESEGILRDGLRQTQTETFFALNHETSQLLLQQ LHMAFPMRAPEQAVLLVPQDLRSPLRTLLQEEFHHVPVLSFAEISSAARIKVMGRFDL EESVALDNDYAA" gene 39429..40343 /locus_tag="Pmen_0040" /db_xref="GeneID:5106714" CDS 39429..40343 /db_xref="GI:146305081" /db_xref="GeneID:5106714" /protein_id="YP_001185546" /localization_and_confidence="Unknown, Class 3" /product="type III secretion apparatus protein, YscD/HrpQ family" /translation="MYELRVLTGLHKGAALPLIGEQWLIGAEEGRDLALHDPGVETLH CRLQRAGDSWQLLAEEGAVLDGEGHSHASMEVLLDCPLVLGSVWVYLAAAESPWPTLP ALVGHPGEDGDSKASAEVGERGRVRLLNRGTGIALGVLLGVMGSAWSLSWPVGSASGP AAVPTSEPAAVSDGRTLLQKDEAVRVLKQMLSERLLTAVSVEPNEQGVALMGSLQGEG MLVYERMLQRFEKDYETDFVLQDQVSSGAAGLPFVIVQIIAGPRGHLVMEDGRRLHVG DKLDGLRLVRIDNERILFDGVRRYEVAW" gene 40340..41698 /locus_tag="Pmen_0041" /db_xref="GeneID:5106715" CDS 40340..41698 /db_xref="GI:146305082" /db_xref="GeneID:5106715" /protein_id="YP_001185547" /localization_and_confidence="Cytoplasmic, Class 3" /product="ATPase, FliI/YscN family" /translation="MNAPATELQEWVRFQAARLGTLSAVQVSGRVSAVSGILLECQVP AAKVGELCEVSKADGSNMLAEIVGFTPDCTLLSALGTPDGIQVGATIRPLGIAHRIGV DDSLLGSVLDGFGRPLLGQAQGAFAGPHDARQTLPVIADALPPTQRPRITTALPTGIR SIDSAMLLGEGQRVGLFAGAGCGKTTLMAELARNMACDVIVFGLIGERGRELREFLDH ELDDTLRKRSVLVCATSDRSSMERARAAFTATAIAEAYRARGLKVLLLIDSLTRFARA QREIGIAAGEPLGRGGLPPSVYTLLPQLVERAGMSESGSITALYTVLIEQDSMNDPVA DEVRSLLDGHIVMSRKLAEKGHYPAIDVPASISRVLSNVAPREHQRANNRLRRLMAAY RQVEMLLRLGEYQPGTDPVTDCAVQLHEPINAFLRQDLREPSPLPVTLEALMQLTAAL PE" gene 41701..42147 /locus_tag="Pmen_0042" /db_xref="GeneID:5106716" CDS 41701..42147 /db_xref="GI:146305083" /db_xref="GeneID:5106716" /protein_id="YP_001185548" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MEDELEADPQRLALEQAIQVLRPLRQHRQASAERQQRQMQQTLA SSRERLAETRERLGSERQAQLARREALAQQHVDRCLSLDEVELWHNQERAMLDRLAHM RQDIHRQGLAIEQQQHQLQVMQAQAKAAQRAVEKLSCLAEAINDEN" gene 42137..42673 /locus_tag="Pmen_0043" /db_xref="GeneID:5106717" CDS 42137..42673 /db_xref="GI:146305084" /db_xref="GeneID:5106717" /protein_id="YP_001185549" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MKTEHAARPQLMQTLQQGAAPQGNLAALKETGWSRRSDFESSLS SWSNSAVPTLADGQLFAQLIQPVHSGGDQSGFGGSGVASFQARPDGMAGELVDELTQR LPSLPSGPINVTLLMPNLGRVQVRAGKRDQQLEVELGFERQDVLERLRAQERTCESAL GEALGQPVRLWMREEASV" gene 42670..43386 /locus_tag="Pmen_0044" /db_xref="GeneID:5106718" CDS 42670..43386 /db_xref="GI:146305085" /db_xref="GeneID:5106718" /protein_id="YP_001185550" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MTPLALGAISSVLAQASRALGAGVTLNFRARGHDGELKLLPMLP NAPSRAGTWLHTNVGPLCLGDAGAVLSLLGELPVTCEGDDQPWYWQLISQRLSQGVAG ALGAISPLDGDAPAGALLHAQLHVRLGDERVQAQLAAPPETWLNWLQAPEWQRIRTAL HEALVLHIPLQLGQLELSAEQLASLQPGDIVLPAQASFTCDGSGHLALASRYWAAQVS SRGEKLFLNLRHEESSQHEH" gene 43376..43777 /locus_tag="Pmen_0045" /db_xref="GeneID:5106719" CDS 43376..43777 /db_xref="GI:146305086" /db_xref="GeneID:5106719" /protein_id="YP_001185551" /localization_and_confidence="Cytoplasmic, Class 3" /product="surface presentation of antigens (SPOA) protein" /translation="MSTEHLSQESLQEMAEMDADALPEGFEERPGEMHLEGQEFAPQD EHASAVEPQQMAALGSIAHLPLQLTLRCGQLTLSVDQLRQLGSGSVLEIHGVAPGHAT LCHGERVVGEGELVDVDGRLGLQITRMATLS" gene 43774..44427 /locus_tag="Pmen_0046" /db_xref="GeneID:5106720" CDS 43774..44427 /db_xref="GI:146305087" /db_xref="GeneID:5106720" /protein_id="YP_001185552" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="Yop virulence translocation R" /translation="MILDGMNPIMLALFLGALSLIPFLLIVCTAFLKIAMTLMITRNA IGVQQVPPNMAIYGIALAATMFVMAPVAYEIQNRLSDNPLDLSSTDSLQASAGNVVEP LQDFMVNNTDPDIATHLLENTQRMWPREMSEKASKSDLLLAIPAFVLSELQAAFQIGF LIYIPFIVIDLIISNLLLALGMQMVSPMTISLPLKLLLFVLVDGWTRLLNSLFYSYM" gene 44435..44698 /locus_tag="Pmen_0047" /db_xref="GeneID:5106721" CDS 44435..44698 /db_xref="GI:146305088" /db_xref="GeneID:5106721" /protein_id="YP_001185553" /localization_and_confidence="Unknown, Class 3" /product="type III secretion protein, HrpO family" /translation="MEALALFKQGMFLVVILTAPPLAVAVLVGVTTSLVQALMQMQDQ TLPFGLKLAAVGLTLAMTGRWIGLELIQFTNMAFDLIARSGGN" gene 44699..45499 /locus_tag="Pmen_0048" /db_xref="GeneID:5106722" CDS 44699..45499 /db_xref="GI:146305089" /db_xref="GeneID:5106722" /protein_id="YP_001185554" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="type III secretion protein SpaR/YscT/HrcT" /translation="MPLDAQAAFELMLGLGLGVARLLPCMLLVPAFCFKHLKGILRYG VVIAVAMIPAPSIGEALASEGASFGVVMGLLIKEVMLGALLGVLLHMPFWMFASVGAL LDSQRGALSGGQLNPALGPDVTPMGELLQEVLVMLVILFGGLPLITQVIWDSYLIWPP TVWLPILTEDGLGVLLSQLSRTLQHMLLYAAPFIALLLLIEAAMAIISLYAQQLNVFI LAMPAKSIAGLAFLLIYLPTLLELGGGEVQQFQLLKQLLGSLVQVPVP" gene 45496..46575 /locus_tag="Pmen_0049" /db_xref="GeneID:5106723" CDS 45496..46575 /db_xref="GI:146305090" /db_xref="GeneID:5106723" /protein_id="YP_001185555" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="type III secretion protein, YscU/HrpY family" /translation="MSEKTEKATPKQLRDAREKGQIAQSQDVSKLLILLMVSEITWSL ATESVQRLQHLMALAINATGQPFLRIVGQLVDEAVTVLLGFLIFSVGVAMVMRLAGGW AQFGFLFAPKALKIDFNKLNPFPQLKQMFSAQNLTNLLMSILKAAVIGITLYVLLWPE LGTLILLANSDLDTYWQSLMEVFRYILRCTLGLLLVLAAVDFGLQKYFHAKKLRMSKD DVKKEYKQSEGDPMVKGQRRQLAHELLNQPPSTAARPVEEADMLVVNPTHYAVALYYR PGKTPLPMIHCKGEDEDALALIARAKKARIPVVQSVWLARTLYKVNAGRHIPRPTLEA VAHIYQLVKQLDEVTDEIIQADSGL" gene 46762..47412 /locus_tag="Pmen_0050" /db_xref="GeneID:5106724" CDS 46762..47412 /db_xref="GI:146305091" /db_xref="GeneID:5106724" /protein_id="YP_001185556" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="hypothetical protein" /translation="MTLIPASVSRPVLAGLIAFHILIIIASNYLVQLPITLFGWHTTW GAFSFPFIFLATDLTVRLIGKHAARVVIARVMLPALVASYVVSVLFHEGVFGGLAVLG DFNLFVFRIAVASFLAYAFGQLLDIQVFDRLRQMRQWWIAPTASTIFGNLLDTFLFFS VAFWRSDDPFMAANWVEIATVDYVIKLAISLMLFVPLYGMLLSAIVRALPQRPATA" gene complement(47452..47766) /locus_tag="Pmen_0051" /db_xref="GeneID:5106725" CDS complement(47452..47766) /db_xref="GI:146305092" /db_xref="GeneID:5106725" /protein_id="YP_001185557" /localization_and_confidence="Cytoplasmic, Class 3" /product="Tetratricopeptide TPR_2 repeat protein" /translation="MSTEALEKMLAKGMDNALLRFGLGKAHLDAGNAAQAAEHLQRCV EFDPGYSAAWKLLGKALQAEGDIEAARRAWQQGLNAAQSKGDKQAEKEMSVFLRKLDK VR" gene complement(47855..49228) /locus_tag="Pmen_0052" /db_xref="GeneID:5106237" CDS complement(47855..49228) /db_xref="GI:146305093" /db_xref="GeneID:5106237" /protein_id="YP_001185558" /localization_and_confidence="Cytoplasmic, Class 3" /product="TrkA-N domain protein" /translation="MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLD IRTVQGKGSFPTVLRQAGADDADMLVAVTNSDEVNMIACQVAYTLFHTPTKIARVRES AYLTREALFDNEAIPVDVLISPEQVVTNYIKRLIEYPGALQVIDFADGKAQLVAVKAY YGGPLVGQQLRQLRQHMPNVDTRVAAIFRRNRPIMPQGDTVIEADDEVFFIAAKAHIR AVMSEMRRLEDSYKRVVIAGGGNIGERLAEAIESRYQVKIIEMNPARCRYLSENLDSA IVLQGSASDRDLLVEENINDADIFLALTNDDEANIMSSLLAKRLGARKVMTIINNPAY VDLVQGGEIDIAISPQLATIGTLLTHVRRGDIESVHSLRRGAAEALEVIAHGDAKSSK VIGRMIEEIALPPSTTIGAIIRDEEVLIAHDDTVIESGDHVILFLVDKKYIRDVERLF QAGLTFF" gene complement(49240..50553) /locus_tag="Pmen_0053" /db_xref="GeneID:5106238" CDS complement(49240..50553) /db_xref="GI:146305094" /db_xref="GeneID:5106238" /protein_id="YP_001185559" /localization_and_confidence="Unknown, Class 3" /product="sun protein" /translation="MNPRLAAARALTAVLSGKASLGSSLPPQLDKVEHHDRALAQDLA FGAARWQPRLQLLADKLLEKPFKAADKDVEALLLIGLYQLLHSRIPEHAAIGETVGCA GALKKPWAKGLLNAVLRRAQREHEALFAELDRDPVLHTAHPRWLQKQLKSFWPEYWQA ICAANNAHPPLILRVNRRHGSRDAYLEELRGAGFAAEPCTFSRDGVRLLQPCDVTALP GFREGRVSVQDEAAQLAADLLELAPGQRVLDACAAPGGKTCHLLEAEPALAEVIAVDL EEKRLTRVRENLQRLGLEARLIAADGRATKVWWDGTPFQRILLDAPCSATGVIRRHPD IKLTRKSEDIPALAQLQGELLDALWPTLAPGGILLYATCSVLPTENSDTIAAFLARTP DAQEVAIGGDFGLQAAHGRQLLPQLDGHDGFYYAKLIKSAVPSHS" gene complement(50550..51494) /locus_tag="Pmen_0054" /db_xref="GeneID:5106239" CDS complement(50550..51494) /db_xref="GI:146305095" /db_xref="GeneID:5106239" /protein_id="YP_001185560" /localization_and_confidence="Unknown, Class 3" /product="methionyl-tRNA formyltransferase" /translation="MPDSLRIVFAGTPEFAAEHLKALLASQHEVIAVYTQPDRPAGRG QKLMPSPVKQLAVEHGIPVHQPASLRNEEAQAELAALKPDLMVVVAYGLILPQVVLDT PRLGCINSHASLLPRWRGAAPIQRAVQAGDLESGVTVMQMEAGLDTGPMLLKVSTPIS AEDTGGSLHDRLARLGPQAVLQAIDGLAAGTLIGELQDDAQANYAHKLNKDEARLDFS RPAVELERLIRAFHPWPICHTTLNGDALKVHAAELGEGSGAPGTILAADKNGLTVACG EGALRLTRLQLPGGKPLAFSDLYNSRREQFAPGLVLGQ" gene complement(51547..52053) /locus_tag="Pmen_0055" /db_xref="GeneID:5106240" CDS complement(51547..52053) /db_xref="GI:146305096" /db_xref="GeneID:5106240" /protein_id="YP_001185561" /localization_and_confidence="Cytoplasmic, Class 3" /product="peptide deformylase" /translation="MAILNILEFPDPRLRTIAKPVDVVDDSIRQLVDDMFETMYDAPG IGLAATQVNVHKRVVVMDLSEDKSEPRVFINPEFESLTDEMDQYQEGCLSVPGFYENV DRPQKVKIKALDRDGQPFELIAEGLLAVCIQHECDHLNGKLFVDYLSNLKRDRIKKKL EKQHRQRA" /EC_number="3.5.1.88" gene 52207..53244 /locus_tag="Pmen_0056" /db_xref="GeneID:5106241" CDS 52207..53244 /db_xref="GI:146305097" /db_xref="GeneID:5106241" /protein_id="YP_001185562" /localization_and_confidence="Unknown, Class 3" /product="Peptidoglycan-binding LysM" /translation="MRKSLLALLFAAGGLALTSLAQAEVQLKDGHPDRYTVVKGDTLW DISGKFLRQPWKWPEIWHANPQVANPHLIYPGDTLNLVYVDGQPRLMLNRGESRGTIK LSPQVRSTPMAEAIPTIPLEAINSFLLSNRIVDTPEEFNGKPYIVAGNAERVVSGAGD RVYARGQFDEQHPIYGIFRQGKTYVDPETKEFLGINADDIGSGEIVAEEGDVGTLLLK RSTQEVRLGDRLFPTEERAINSTFMPSEPAGEIKGLILDVPRGVSQIGQFDVVTLNKG ARDGLEIGNVLAVYKTGETVRDRVTGESVKIPDERSGLLMVFRTYDKLSYGLVLQASR QLAVMDKVRNP" gene 53331..54437 /locus_tag="Pmen_0057" /db_xref="GeneID:5106242" CDS 53331..54437 /db_xref="GI:146305098" /db_xref="GeneID:5106242" /protein_id="YP_001185563" /localization_and_confidence="Cytoplasmic, Class 3" /product="DNA protecting protein DprA" /translation="MPLPSSHSPAELEARLRLHLLPELGPRRFRKLLSAFDSASAALS APASAWRSLGLPAVCAEPRRSAEIRQRAAAAMHWLDQTDQHLLMWDDPRYPALLAELA DAPPLLFVGGDPLLLEAPQLAMVGSRRASRPGLDNAHAFARSLAAGGFVITSGLALGI DGAAHQGALDGGGKTVAVLGTGLECLYPARHKRLAAQIIEQGGALVSELPLDCPPQAS NFPRRNRIISGLSLGVLVVEASPSSGSLITARLAAEQGREVYAIPGSIHHPGARGCHQ LIRDGATLVESIEHILEALRGWQTPSGQQASAAQPGAEQHPLLTLLHAAPHSSEALAH SSGWPLAQVLAALTELELDGLVCCEAGRWLARGP" gene 54504..55061 /locus_tag="Pmen_0058" /db_xref="GeneID:5106243" CDS 54504..55061 /db_xref="GI:146305099" /db_xref="GeneID:5106243" /protein_id="YP_001185564" /localization_and_confidence="Cytoplasmic, Class 3" /product="SUA5/yciO/yrdC, N-terminal domain" /translation="MASNWQVQQAARVVCEGGVIAYPTEAVWGLGCDPWNEVAVDRLL ALKERPVHKGLILVADDIEQFDFLLDDLPAIWQERLAASWPGPNTWLVPHQDRLPAWI TGVHDSVALRVSDHPLVRALCRLTGPLISTSANPAGRPAARSRLRVEQYFPRQLDKVL GGALGGRKNPSLIRDLRTGDVIRSS" gene complement(55173..56150) /locus_tag="Pmen_0059" /db_xref="GeneID:5106244" CDS complement(55173..56150) /db_xref="GI:146305100" /db_xref="GeneID:5106244" /protein_id="YP_001185565" /localization_and_confidence="Unknown, Class 3" /product="Alcohol dehydrogenase, zinc-binding domain protein" /translation="MAKRIQFSQHGGSEVLEYRDYQPAAPGPREVRVANRAIGLNFID TYFRSGLYAPPALPSSLGTEGAGVVEAVGSEVRNFAVGDRVAYATGPLGAYSELHVLP ADKLVRLPEAISFEQAAAVMLKGLTVQYLLRQTYELKGGETILFHAAAGGVGSFACQW ARALGVNLIGTVSSAEKAARAKEQGAWATIDYSHENVVQRVLELTDGKKCPVVYDGVG KDTWETSLDCVAPRGLLVSFGNASGAVTGVNLGVLAQKGSLYVTRPTLAGYADTPERL QTMADELFGMIAGGQLQVEISNRYALKDAAAAQDALSARQTTGSTILLP" gene 56295..57209 /locus_tag="Pmen_0060" /db_xref="GeneID:5106245" CDS 56295..57209 /db_xref="GI:146305101" /db_xref="GeneID:5106245" /protein_id="YP_001185566" /localization_and_confidence="Cytoplasmic, Class 3" /product="Coproporphyrinogen oxidase" /translation="MTDRTEAVKAYLLDLQDRICAALEAEDGQALFREDAWQRPAGGG GRTRVIENGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPY VPTSHANVRFFSAEKEGEEPVWWFGGGFDLTPYYANEEDCRYWHQVAFDACAPFGAEV YPRFKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFMRAIGDAYIQAYLPIV QRRKLTPFGEREREFQAFRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPMVRWG YDWKPEPGSEEARLTEYFLTDRDWLSGA" /EC_number="1.3.3.3" gene 57317..58138 /locus_tag="Pmen_0061" /db_xref="GeneID:5106246" CDS 57317..58138 /db_xref="GI:146305102" /db_xref="GeneID:5106246" /protein_id="YP_001185567" /localization_and_confidence="Cytoplasmic, Class 3" /product="shikimate 5-dehydrogenase" /translation="MDRYCVFGNPIGHSKSPLIHRLFAEQTGQVLTYEARLAPLDDFI GDARAFFAEGLGANVTVPFKEEAFRLADELSERARRAGAVNTLKKLEGGRLLGDNTDG AGLTRDLQDNAGFALTGKRILVLGAGGAVRGVLEPFLAQKPAVLVIANRTVAKAEQLV REFADLGPLVAAGFDWLDAPVDLIVNGTSASLGGELPPIAPSLIQPGHTLCYDMMYGK EPTAFNRWAFDQGAARCLDGLGMLVEQAAEAFELWRGVRPNTAPVLAELRRQLAG" gene complement(58342..59982) /locus_tag="Pmen_0062" /db_xref="GeneID:5106247" CDS complement(58342..59982) /db_xref="GI:146305103" /db_xref="GeneID:5106247" /protein_id="YP_001185568" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="sulphate transporter" /translation="MRSGATLGSCELPESNPTCLAPTMPLPDLQTLLPFLRWLPGTSR KTLGNDLLVGLTGAVLALPQSLAYALIAGLPAEYGLYAAIVPVIVACLWGSSWHLICG PTAAISIVLFTSVSPLAKAGSEQFIALVLLLTFLAGLFQWLLGLLRFGALVNFVSQSV VLGFTLGAALVIAIGQIPNLLRVEIVSQATALASLLQIGQHLNDVHWPSLALAAFTLL LCLAVRRLWPKAPALLLGLVAGSALVWLLPERLVGGIALVSAFEGGLPPFTPLQFDLN SLLQLLPAAVACGMLGLVTSLSIARALAVKSHQFLDANQEVRAQGLSNMLGPWFAGSL SAGSFTRSALNLQAGARTPLAGVFSALLVALFALFGAALLAHIPLPVMAAGILLICWG LVDLAAIRALRRVSRAEFAVMLLTLLATLLLELQTAIYAGVLASLFFYLKRTSQPRVR LWQDGDDEVLRIEGSIFFGACHYIQQLLQRSRGQRLVIDARHINFIDYAGVEMLHQEA RRLLAGQRSLVLRQARPQVVEEILKLEGAERCPVQFED" gene complement(60029..60949) /locus_tag="Pmen_0063" /db_xref="GeneID:5106248" CDS complement(60029..60949) /db_xref="GI:146305104" /db_xref="GeneID:5106248" /protein_id="YP_001185569" /localization_and_confidence="Unknown, Class 3" /product="Substrate-binding region of ABC-type glycine betaine transport system" /translation="MNRINALLLAGALSASANVWAEDAACATVKLGDPGWSDIAVTNG IASFLLEGLGYQTQSQTLAVPIIYAGLQKGQLDVFLGNWMPAQQSNYDKFVASGEVDQ LAQNLDGTEYTLAVPTYAFDAGVKTFADLDKHADKFGKKLYGIASGSPANESIKQMIA ADEFGLGDWQLVESSEQAMLVQVGRAVKREQFVVFLGWTPHPMNVQYDMKYLRGGEKY FGDSGQVNTLARKGYAQQCPNAGKLLSNLKFTQEMENSIMDRVLSKQASNAQAIKDWL QANPQVLDAWLDGVTTRDGGDGLAAVKARL" gene complement(60993..62501) /locus_tag="Pmen_0064" /db_xref="GeneID:5106249" CDS complement(60993..62501) /db_xref="GI:146305105" /db_xref="GeneID:5106249" /protein_id="YP_001185570" /localization_and_confidence="Cytoplasmic, Class 3" /product="sulfatase" /translation="MKRPNILFIMADQMAAPILPLHDAASPVQMPNLMKLAERAVVFD SAYCNSPLCAPSRFTLVSGRLPSQIGAYDNAADFPADVPTYAHYLRRLGYRTALSGKM HFCGPDQLHGYEERLTSDIYPADYGWAVNWDEPDVRASWYHNMSSVLQAGPCVRSNQL DFDEEVVFKARQYLYDHVRLTPEQPFCLTVSMTHPHDPYTIPREYWERYEGVDIPMPR QHIEQAEQDPHSQRLLKVIDLWDKPLPADKIRDARRAYFGACSYIDDNIGKLLKTLEE CGLAEDTLIVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPQRFAAHRVSQSVST LDLLPTLVELAGGRVEEGLALEGRSLLAHLTGEGGHDEVIGEYMAEGTTSPLMMIRRG PWKFVYSEQDPLLLFHLQQDPQERENLAGSADHQGVLAEFLAEARARWDIPAIHAATL ASQRRRRLVAEALSQGKLTSWDHQPWVDASQQYMRNHIDLDDLERRARYPQV" gene 62616..63569 /locus_tag="Pmen_0065" /db_xref="GeneID:5106250" CDS 62616..63569 /db_xref="GI:146305106" /db_xref="GeneID:5106250" /protein_id="YP_001185571" /localization_and_confidence="Cytoplasmic, Class 3" /product="transcriptional regulator, LysR family" /translation="MRKVLDEISLDSLRVFESAARLLSFTAAANEQGSSQPAISQQIK RLEQQLAVRLFDRVHRGLVLTEAGELLLRYVQEGLHSLDSGLQAVVARQQHEVLQVAT DFAFAAYWLMPRLQRFHQLHPEVDVSLVTTERDLGGNLPGEIDVAISFGDGRCKHGES LLLFGEEVFPVCSPHLLHGREPVDSAALLARLPLLHLRPEARANWFAWDGVFRALGIA EPPSAGALRFDNYTLLIQAAIAGQGVAIGWRYLVDELLAQGLLVRMLDTSIRSAYGYY VVMPERKRRARLVRCFVDWLQDELASLQRQPPQGGWAGVAI" gene 63685..64587 /locus_tag="Pmen_0066" /db_xref="GeneID:5106251" CDS 63685..64587 /db_xref="GI:146305107" /db_xref="GeneID:5106251" /protein_id="YP_001185572" /localization_and_confidence="Periplasmic, Class 3" /product="Serine-type D-Ala-D-Ala carboxypeptidase" /translation="MKLRYSILGLLLSAGLVVSNLQAAPAQPQQELAAGSALLIDLKT GKELYSSNPDLRLPVASVTKLMTAMVVLDAKLPLDEVLPITIRDTKEMQGVYSRVRIG SEISRRDMLHLALMSSENRAAASLAHHYPGGHVAFVAAMNAKAKALGMHNSHFVEPTG MSERNVATARDLALMIKATQQYPLIGQFSTDSEATVTFRKPTYTLGFRNTNALVRKPD WDIGMSKTGFTNAAGRCLVMLTSMNQRSVAFVVLGAFGKYTHMADANRLKRWMETGKV TPVPAAALSYKQQKLTEWSMQAAQ" /EC_number="3.4.16.4" gene complement(64684..65592) /locus_tag="Pmen_0067" /db_xref="GeneID:5106252" CDS complement(64684..65592) /db_xref="GI:146305108" /db_xref="GeneID:5106252" /protein_id="YP_001185573" /localization_and_confidence="Cytoplasmic, Class 3" /product="transcriptional regulator, LysR family" /translation="MKISLEEMLAFVCVVDSGSISAAAEQLEQTASGVSRALGRLEEK LAVTLLRRTTRRLELTEEGEVFLVQARRILDSVEEAEEQMAVRRQAPAGRLRINTASP FMLHVIVPLIGDFRALYPQIELELNSDDRIIDLLERRTDLAIRIGHLPDSSLHARPLC HSRRRVLASPDYLARHGQPMRTEELAGHSLIGFTEPDSLNEWPLRHALGERWRITPSL HVSSGDTVRELALAGQGLVCLSDFMTDVDRASGRLVEVLAEQRVEVRQPINAVYYRNT ALASRITCFLDFLSERLGSPGLTPHD" gene 65802..66605 /locus_tag="Pmen_0068" /db_xref="GeneID:5106253" CDS 65802..66605 /db_xref="GI:146305109" /db_xref="GeneID:5106253" /protein_id="YP_001185574" /localization_and_confidence="Unknown, Class 3" /product="aldo/keto reductase" /translation="MKFIPAFGLGTFRLKDQVAIDSVRTGLELGYRHIDTAQIYGNEA EVGQAIAASSVARDELFVTTKIWTENLGPGRVIASLQESLQRLGLERVDLCLIHWPSP GDEIPVAQYLGELLEAKRQGLTAAIGVSNFTIAHLQQAIEAVGADEIATNQVEIHPLL QNRKLVDFTRQQGIHLTAYMPLAYGKVLAEPEIQRIAAAHGVSPAQVALAWSLQQGYA VIPSSTKRENLAANLAAAELRLSTEDMAAIATLERGERVANPGFAPRWD" gene complement(66677..67420) /locus_tag="Pmen_0069" /db_xref="GeneID:5106254" CDS complement(66677..67420) /db_xref="GI:146305110" /db_xref="GeneID:5106254" /protein_id="YP_001185575" /localization_and_confidence="Cytoplasmic, Class 3" /product="short-chain dehydrogenase/reductase SDR" /translation="MRKNLLITGASRGIGRATALLAAAGGWTVGVNYRSDRAAADEVV AQIEAMGGTAVALPGDVANEQEVQRLFEAMDRLGPLHGLVVNAGIVAPPLPLLEMSGE RLRRMFDVNVLGSYLTAREGARRMARSRGGEGGSMVLVSSVAASLGAPFEYVDYAGAK GAMDVLTRGLAKELGGEGVRVNAVRPGLIDTEIHASGGQPDRAERLGKATPLGRAGRA EEVAEAIVWLLDDKASYTTGALIDIAGGR" gene complement(67576..68385) /locus_tag="Pmen_0070" /db_xref="GeneID:5106255" CDS complement(67576..68385) /db_xref="GI:146305111" /db_xref="GeneID:5106255" /protein_id="YP_001185576" /localization_and_confidence="Unknown, Class 3" /product="tryptophan synthase, alpha subunit" /translation="MSRLQNRFAELKAENRAALVTFVTAGDPDYATSLSILKGLPEAG ADVIELGMPFTDPMADGPAIQLANIRALAGKQGMQQTLQMVREFRAGNQSTPLVLMGY YNPIFVYGVERFISDAKEAGVDGLIVVDLPPEHNDELCEPAQSAGLDFIRLTTPTTDD DRLPTVLAGSSGFVYYVSVAGVTGAGAATLDHVEEAVARLRRHTDLPVCIGFGIRTPE HAAEVAKRAEGAVVGSALIDKIAEAKSPQQAIDGVLGLCRELAEGVRGARR" /EC_number="4.2.1.20" gene complement(68382..69617) /locus_tag="Pmen_0071" /db_xref="GeneID:5106256" CDS complement(68382..69617) /db_xref="GI:146305112" /db_xref="GeneID:5106256" /protein_id="YP_001185577" /localization_and_confidence="Unknown, Class 3" /product="tryptophan synthase, beta subunit" /translation="MTAMPGSQNSFRTGPDARGLFGRFGGQFVAETLMPLINSLAAEY EKAKSDPAFLEELAYFQRDYIGRASPLYYAERLSQHFGGAKIYLKREDLNHTGAHKIN NCIGQILLAKRMGKQRIIAETGAGMHGVATATVAARFGMQCVVYMGTTDIDRQQANVF RMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVHNTFYLIGTAAGPHPYPAMVRDFQ SVIGNEVREQILAKEGRLPDSLVACIGGGSNAIGLFHPFLDDEGVQIIGVEAAGHGID TGKHAASMAGGAPGVLHGNRTFLLQDEDGQITDAHSISAGLDYPGVGPEHAWLHEIKR VEYVPISDDEALEAFHHCCRLEGIIPALESAHALAEAFKRAPKLPKDHLMVINLSGRG DKDMQTVMHHMQDNQEKHA" gene 69732..70400 /locus_tag="Pmen_0072" /db_xref="GeneID:5106257" CDS 69732..70400 /db_xref="GI:146305113" /db_xref="GeneID:5106257" /protein_id="YP_001185578" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="hypothetical protein" /translation="MKDRWLWTFPVVGAFLVAIALVLQIHRWNEEERMLRTTGSVVAV MGRGCPLVEFFPLPGERVTFTGEVCSRPGYAKGDIVELFYDPLEPQNAHIDSFLQNWF VSLILGGIGLFFTLVGLALLMPEALVDGRRNRLKRKGQAVQAQFVEVRRNPLSTLNNV PAWQLVCQWYNPSSGAVHLFYSEDLWFDPQPFIENEFLQVMVDPDDLRRYSVDTSFLP RLAD" gene 70405..71316 /locus_tag="Pmen_0073" /db_xref="GeneID:5106258" CDS 70405..71316 /db_xref="GI:146305114" /db_xref="GeneID:5106258" /protein_id="YP_001185579" /localization_and_confidence="Cytoplasmic, Class 3" /product="transcriptional regulator, LysR family" /translation="MNRDLPPLNALRAFEAAARLQSVSRAGEELHVTHGAISRQIRVL EEQLGVSLFDKDGRGVKLTEAGVRLRDAAGDAFERLRGVCAEIRQRQEGAPFVLGCPG SLLARWFIPRLDRLNRDLPELRLQLSASEGELDPRRPGVDATLCFATPPWPADVQVHE LDTERIGPVLSPRYAGYEALRGAPAAALLGEPLLHTVSRPQAWPQWALAQGLEPARLQ QGQGFEHLYYLLEAAAAGLGVAIAPQQLVADDLAAGRLLAPWGFVETGAKLALWVPGR GHDLRAERLAGWLAAELNGLAALRSPV" gene 71370..71609 /locus_tag="Pmen_0074" /db_xref="GeneID:5106259" CDS 71370..71609 /db_xref="GI:146305115" /db_xref="GeneID:5106259" /protein_id="YP_001185580" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MKESRDYLEMAFRSIKCFADDGKLLVHELESLVDIARRDGVVDA NEKRILQGIVARLNPAELTADMQTKIAALRAELQF" gene 71708..71923 /locus_tag="Pmen_0075" /db_xref="GeneID:5106260" CDS 71708..71923 /db_xref="GI:146305116" /db_xref="GeneID:5106260" /protein_id="YP_001185581" /localization_and_confidence="Unknown, Class 3" /product="protein of unknown function DUF1458" /translation="MTDHHTYKKIEIVGSSRTSIEDAIENALSECAKSVRNMDWFEVV ETRGHIEDGKVGHYQVTLKVGFRLSGS" gene complement(71892..72869) /locus_tag="Pmen_0076" /db_xref="GeneID:5106261" CDS complement(71892..72869) /db_xref="GI:146305117" /db_xref="GeneID:5106261" /protein_id="YP_001185582" /localization_and_confidence="Cytoplasmic, Class 3" /product="NAD-dependent epimerase/dehydratase" /translation="MRVLITGAAGFIGHQLLDELAIQHPQWTLIAADIRALDSRGLKA NVEPVLLDMGRPAQVRACVAGWKPDAIVHLATVIRPPRDMSEAHLHAIEVGGTQCLVD SAIANGVRQLIVTSSGAAYGYAPENAEWIDENQPLRGHPHFVYARHKLEIEQLLARSR AQHPQLHQLILRPGTILGRRLNNPISDLFKKRAVLGVRGHDSRFVFIWEQDVVGIIRQ GLETAREGIYNLAGDGALSLAEIAEILGKPYRPVPATLLAAALRLLKPLGLSQYGPEQ LDFLRYRPVLANQRLKEEFGYQPRYTSREAFLAFLNAQGISYRSGESRP" gene 73153..73734 /locus_tag="Pmen_0077" /db_xref="GeneID:5106262" CDS 73153..73734 /db_xref="GI:146305118" /db_xref="GeneID:5106262" /protein_id="YP_001185583" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MFRSMLMLLAALALGGCIESETPLVEERRLLLSGEDFSAYDAPD GGRYEKLVTYAARSIDLSFESEGSDWFYLYSGVSLYPRASDALMTSYAETFGASFGLR GSGLVEQELPLQTKLAARASLKLLTQDGEPVGNLFYATVGNKSMFTIFTGVYFERAED FEAFVAPKLLALRQYKHDDPLLTWAGRTLGFDE" gene complement(73972..75201) /locus_tag="Pmen_0078" /db_xref="GeneID:5106263" CDS complement(73972..75201) /db_xref="GI:146305119" /db_xref="GeneID:5106263" /protein_id="YP_001185584" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="nucleoside recognition domain protein" /translation="MLNGLWLSFFLLGAIAALARWLIGGDATVFGAMVESLFAMAKLS VELMVVLFGTLTLWLGLLRIAEKAGLVDLLARLLGPLFARLMPEVPRGHPALGLISMN FAANGLGLDNAATPIGLKAMRALQDLNPSATTASNAQILFLVLNTSSLTLLPVSIFMY RVQQGAEDPTLVFLPILLATSASTLAGLLAVALVQRLRLWDPVVLAYLIPTALLLGGF MALLAGMSATALAALSSLLGNLTLFGLIMLFLLVGALRRVAVYESFIEGAKDGFDVAK SLLPYLVAMLCAIGVLRASGALDFGLDGIRWLVEALGWDTRFVDALPTALMKPFSGGA ARAMLIETMENFGVDSFPALIAATVQGSTETTFYVLAVYFGAVGLQRARHAVGCALVA DAAGIIAAIGVCYWFFG" gene complement(75366..75827) /locus_tag="Pmen_0079" /db_xref="GeneID:5106264" CDS complement(75366..75827) /db_xref="GI:146305120" /db_xref="GeneID:5106264" /protein_id="YP_001185585" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MQLMHAIAAALLMGGALAAQAADRDAAFHPGELLTSNAEYREAW QDLVKNEERLPDWLINLSGLSTPMQAVEADSDRYLVGQVCEAHNCFSQRAYIAFEWED DDAYALYVQVPEGLPEDRAPSEHASLRWLGEPSEEIQQMLMEQLRNDPNWY" gene complement(75838..76002) /locus_tag="Pmen_0080" /db_xref="GeneID:5106265" CDS complement(75838..76002) /db_xref="GI:146305121" /db_xref="GeneID:5106265" /protein_id="YP_001185586" /localization_and_confidence="Unknown, Class 3" /product="protein of unknown function DUF1328" /translation="MLSWALTFLIIAIIAAVLGFGGIAGTAAGIAKILFVVFLVLFII SFIMGRRPRM" gene complement(76022..76294) /locus_tag="Pmen_0081" /db_xref="GeneID:5106266" CDS complement(76022..76294) /db_xref="GI:146305122" /db_xref="GeneID:5106266" /protein_id="YP_001185587" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MHRSRGWKRKGRTCHSPQCDRRTAMWIVALVLAALLLLLSLILA SVLLVGQTLCASRNTTAELDLPEGSPRQPAIPSNPQHPWPAWAATH" gene 76571..76972 /locus_tag="Pmen_0082" /db_xref="GeneID:5106267" CDS 76571..76972 /db_xref="GI:146305123" /db_xref="GeneID:5106267" /protein_id="YP_001185588" /localization_and_confidence="Unknown, Class 3" /product="thioesterase superfamily protein" /translation="MNDYEQEDPIPQGDLALQITALPRETNGFGDIYGGWLVSQMDLA GTAMASKVAGGRVATVAIDRMAFLVPVAVGAQLSFYTQALEVGRSSIQMMVEVWSDDP LSNEWRKVTEAVFVFVAIDGSGRTRPVPARR" gene complement(77048..77680) /locus_tag="Pmen_0083" /db_xref="GeneID:5106268" CDS complement(77048..77680) /db_xref="GI:146305124" /db_xref="GeneID:5106268" /protein_id="YP_001185589" /localization_and_confidence="Cytoplasmic, Class 3" /product="two component transcriptional regulator, LuxR family" /translation="MTAATIRIALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAF DLLQRTPVDILLMDVGLRDINGLELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGA SGYVLKEAPSREIVAAIEAIAAGGSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQ GLNNKVMARTLQISVRTVETHRLSIRRKLAIDKPADLLKHALAHGWVPYD" gene complement(77721..79070) /locus_tag="Pmen_0084" /db_xref="GeneID:5106269" CDS complement(77721..79070) /db_xref="GI:146305125" /db_xref="GeneID:5106269" /protein_id="YP_001185590" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="integral membrane sensor signal transduction histidine kinase" /translation="MQLKHKIVALSVLPLLLAVAVVCVLVFFQNQRLGEQQARLIEDS ILASKRVELKHYVEMALSIISPLYESGRDDAEIKQQVLGVLARISFGSDGYFFVYESN GRNLMHPRQGELVGQDLWNMTDPRGLLVIQALMQSAQSGDGFQLYAWQKPSTGEVTDK LAYVVMLERWGWMLGTGIYLEDVDQAIAQVHDEASNGIHATMLAIAGVALVAVLLVFA GGLALNLSEHRLADRKLQLLTQRIVSLQEEERSRVSRELHDGISQLLASIKFQFELAS LELASGNEQGLDTLHKGTERLAGAIGEVRRISHDLHPSLLDTLGLPAAIAQLVAEFEQ RSGLLIDYKNDLGDTLLNDGMAVALFRILQEALTNIERHAQANTVAISLDGRARRVRL RVRDDGVGFSSRHFDTLTGGIGLRNIRQRVEHFGGRFALTSQPGHTELMVTLPLPTP" gene complement(79640..80740) /locus_tag="Pmen_0085" /db_xref="GeneID:5106270" CDS complement(79640..80740) /db_xref="GI:146305126" /db_xref="GeneID:5106270" /protein_id="YP_001185591" /localization_and_confidence="Unknown, Class 3" /product="TRAP dicarboxylate transporter- DctP subunit" /translation="MKRRDILAAAGVGLAATALVGCKEEAKSAAAPQEGSSSQTFNWK MVTSWPKNFPGVGVGAERFAKLVEEMSNGRLKIKVYAAGELVPALEVFDAVSRGTAEM GHGAPYYWKGKVPAAQFFCASPFGPNAQEMNAWLHRGGGQQLWEEVYKPFGVLPMACG NTGVQTAGWFNKEINSVDDFKGLKMRTPGLGGEVLTKMGGTVVNMPAGEIFTAMQTGA IDATEWIGPYNDLALGLHKAAKYYYTPGWQEPSVLFELDVNLKAWDTLPADLKAIVRA AARDVNGDMLDDYNAKNMEAMEQLKADGVEVRRLPDEVLARLKEVAAEVVDASAAADP AASKVWEHQKAYLKRLYEYAESNEKDIYNIRG" gene 80925..81467 /locus_tag="Pmen_0086" /db_xref="GeneID:5106271" CDS 80925..81467 /db_xref="GI:146305127" /db_xref="GeneID:5106271" /protein_id="YP_001185592" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="Tripartite ATP-independent periplasmic transporter, DctQ component" /translation="MPNPPPLLGLARFIDACNALFGKACAWLTLFLVIGTAIVVVLRY GFGIGATALQEAVLYAHALVFMGAAAWVLQRNGHVRVDIFFQKFSGRRQALVEILGTL LFLLPVALFLGWASWDYVSNSWATREASGESGGLKFVYLQKSIILVLVVSLALQGVSN LIKALYVISGRLPAPEVKHG" gene 81460..82836 /locus_tag="Pmen_0087" /db_xref="GeneID:5106272" CDS 81460..82836 /db_xref="GI:146305128" /db_xref="GeneID:5106272" /protein_id="YP_001185593" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="TRAP dicarboxylate transporter, DctM subunit" /translation="MAELMAILLFVSICLALMAGYPVAFTLAGVSLLFAGIGVLTGTF DAGYLSALPNRLFGIMNNQTMLAVPLFVFMGVMLERSRVAEDLLESMSRLFGTLRGGL AISVCVVGALLAASTGIVGATVVTMGLLALPTMLRRGYDPAISTGTLAATGTLGQIIP PSIVLVLLGDVMSSAYQQAQLKMGIFSPKTVSVGDLFVGALLPGLLLVGLYILYIVGT AIFQPKKLPALPQEELGPIEWGKLIKALVPPLILIGAVLGSILAGYATPTEAAALGAV GAMLLAASKGKLNFGQLKEVAYGTTEISAMVFMILIGASLFSLVFRGFGGEHMIEEVF AQLPGGVLGAFFLVMLVIFLLGFILDFIEITFVVVPIVGPVLLAMGLDPIWLGVMIAL NLQTSFLTPPFGFALFYLRGVTPASVATSTIYKGVVPFILIQILLLVIAYMFPGLITW LPEQVYGK" gene 82941..83843 /locus_tag="Pmen_0088" /db_xref="GeneID:5106273" CDS 82941..83843 /db_xref="GI:146305129" /db_xref="GeneID:5106273" /protein_id="YP_001185594" /localization_and_confidence="Cytoplasmic, Class 3" /product="Aldose 1-epimerase" /translation="MSNTQVERVELDQLICWRIRTQRSELLVAQQGAQILAYQRDGQP PLIWLSPEAAYQRAQSVRGGVPICWPWFGDLRRNPQAVQAHYQQVEAPAHGLVRGLDW QLLGIDEEGEQVTLRFAFDTQREPLAGWPHAALLQFEIRLADDLAMSLQTHNRGEAPL TLSQALHTYFAVSDVRQVSVDGLQGCRYVDTLQDWRELRQDAELRFVGETDRIYMDTP ARLSIVDPGWGRRIHLDCSGSRSAVLWNPWVDKARRLSQFPDDAWQNMLCIETANLLE DVVQVKPDEWHRLDLRLSSDSFGH" gene 84279..85841 /locus_tag="Pmen_0089" /db_xref="GeneID:5106274" CDS 84279..85841 /db_xref="GI:146305130" /db_xref="GeneID:5106274" /protein_id="YP_001185595" /localization_and_confidence="Cytoplasmic, Class 3" /product="ImpA domain protein" /translation="MTYSSKLTAHYLNLAKSPINEGNFAGEDVRYSSEYEMLETELGK ASSLHETGAIDWQKVREGSENLLTTQSKDLRAATWLTWGLFQRESFAGLQAGLNLLHY LCEHHWHELHPRKARTRTAAINWLLPRLEQALAEHVPISEQLPLFRRLAEHLHGLEAA LSSHLGEDSPLLLPLCRRLDEQIKRASQGQAEPGAVGAAIAQVKQVATQIITGSGPIE SEKDAHKALRSQQDAARPLCAWWLKNKATDLKPLRLARTLLWLPIESLPERNAEQITA LRGLPADKLASYKERFAQGAYADLLADLEASIARAPFWLDGQRLVWECLQELKAEQAM REVEIQLALFLQRVPGLDELRFHDGVPFADAETRAWIGAHVLPHLQAPEVEKKPAASE QGATPPWEEALQQVLPGLRKDGLKAAVQQLKQGMSRARGGRERFFWQLTLARLCFAAK KYDLAKTQLESLDQTLQAAGLGEWEPDLALDVLRLLHHCCELLPQNHAVRDSKDEIYR RLCHLDLEVVLE" gene 85896..86402 /locus_tag="Pmen_0090" /db_xref="GeneID:5106275" CDS 85896..86402 /db_xref="GI:146305131" /db_xref="GeneID:5106275" /protein_id="YP_001185596" /localization_and_confidence="Unknown, Class 3" /product="uncharacterised conserved protein UCP028301" /translation="MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLMVLGDFTQRA DDRKIEDRKPISIDKNSFDEVLAKQELNLTFAVPNRLQDEQTDDELAVQLRINSMKDF NPANLVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIESVLSDDDSRDRVLGELGL AAKDKLDS" gene 86428..87906 /locus_tag="Pmen_0091" /db_xref="GeneID:5106276" CDS 86428..87906 /db_xref="GI:146305132" /db_xref="GeneID:5106276" /protein_id="YP_001185597" /localization_and_confidence="Unknown, Class 3" /product="protein of unknown function DUF877" /translation="MSTTSAAVESSHSAAELGILDRIIAETKLTPDDEAYDIAKRGVS AFIEELLKPQNENEPVKKAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLKLL VDRTNFRENIKLEILNASKQDLLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALI ANYYFDPSAPDVKTLQYVASVACMSHAPFIASAGPKFFGLETFTGLPDLKDLKDHFEG PQFTKWQSFREQEDARYVGLTVPRFLLRNPYDPEDNPVKTFVYKENVANSHEHYLWGN TAYAFASRLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDR REYELAEEGFIALTMRKGSDNAAFFSANSAQKPKFFGISEEGKTAELNYKLGTQLPYM FIVNRLAHYLKVLQREQIGAWKERTDLELELNKWIRQYVADQENPSSEVRSRRPLRAA QVIVSDVEGEPGWYRVSLNVRPHFKYMGADFTLSLVGKLDKE" gene 87913..88341 /locus_tag="Pmen_0092" /db_xref="GeneID:5106277" CDS 87913..88341 /db_xref="GI:146305133" /db_xref="GeneID:5106277" /protein_id="YP_001185598" /localization_and_confidence="Unknown, Class 3" /product="GPW/gp25 family protein" /translation="MNGYGSLFERLGGEAGQRAGWSREVAAMASVAAHLAKMLSTRAG SVQTLPDYGLPDLNDMRLSLHDSLQQARIAIERFIEAYEPRLTQVRVISLPRTHDPLR QAFAIDAMLEMDGVRRQVSFSASLDGSGQVKVNPGASHVR" gene 88331..89776 /locus_tag="Pmen_0093" /db_xref="GeneID:5106278" CDS 88331..89776 /db_xref="GI:146305134" /db_xref="GeneID:5106278" /protein_id="YP_001185599" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MSGKPAARLGDPTACPIPGHGTNPIAAGSPDVLFDSLPAARMGD ASACGGAMAGAVIPNVLINGKPAAVVGSVGSHGNTVVAGSGTVLIGASGGGAAFSPVA PLSLVAAAASVINVLVPPAQAAEERALDYTIALQRGGNRVLTPLRIPDYEEIGQGTTN NRETIDFQIRNRKQPADSLTLEVYDGETLLHSEADTAALLPTGEHQWQWDGYDRSGVL DTRVLKSPNLLVRLTVKKGAEEQVSELRLDNSAAAAPWVDARVDRNAGSVEITLRPSF SDGGVSGRNNQLTARTFDELKVLAKAGVEYYWSREGSRAGGIDKPIQTAKGAFQVKVI ADVNAKPSAKNFPLIASIGDDFGRSTSFAMFKKIYHNLGMWAAANYPANFADEDFAHT AAHEVGHLILNEYGDGGLIPAYSWSHKSTSTILTQAPVDNHPIPAAGEIDLMHYHSHS PRNYQDYWQRSIASENDVKGLLWLTRVKFDD" gene 89769..90155 /locus_tag="Pmen_0094" /db_xref="GeneID:5106279" CDS 89769..90155 /db_xref="GI:146305135" /db_xref="GeneID:5106279" /protein_id="YP_001185600" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MTKHVLCLLSILLAGCSSQPKSVFIANFENVCGYTVEVSTHDYS NAKGSFPAGQRLAADDSIEVLSYIVFNETLEDSVPGTYRLDIAAHGKSVSLDKQRLLA HLKRSPIEQKGNAITIWTINDTSLCP" gene 90186..91976 /locus_tag="Pmen_0095" /db_xref="GeneID:5106280" CDS 90186..91976 /db_xref="GI:146305136" /db_xref="GeneID:5106280" /protein_id="YP_001185601" /localization_and_confidence="Unknown, Class 3" /product="protein of unknown function DUF879" /translation="MSFNHYYQSELTALRQLGKRFAERSPALAPFLGQAGRDPDVERL LEGFAFLTGRLRQKLDDELPELTHSLMHLLWPNYMRPLPAFSMLQFDPLTRPGPALPV KRGTPVEAKAIEGVTCRFRTCYPTEVLPLALNGLDYSVKGDGALLSLRLGMSADGHLG EIGLNKLRLHLAGERYIGQMLYLALLRNLGGIQLVLLDAAGKPMQDAFGQTLGTLQLK PEQVQPVGFAEDEALIPYPLNTFRGYRYLQEYFAFQDKFLFVDLLGLDAIHGLPEDLL KQARGLELRFDIHKAGVQRIRPTLENVRLYCTPVVNLFQHDAIPIRLDGKQDQYLLLP AEFDAQHCGVFSVDRVTGWKPGGMGYEEYVPFESFEHDPSFDVPVARPHYSVRQQPSM LGDGLETWLSFGLRNLDQHETLSIELTCTNQNLPRQLSLGDICLPSEDTPDFLSFRNI SAVTPCYAPPLHRDFLWKLISNMSLNYLSLANVEALKVILETYDLPRYYDQHAERVSK RLLGGLKSIGHRHVDRLHRGLPVRGVRTELTMNPDGYLGEGDLFLFASVLNEFFALYA SLNSYHELHVQSTQGELYKWTPRMGQQPLL" gene 91940..92947 /locus_tag="Pmen_0096" /db_xref="GeneID:5106281" CDS 91940..92947 /db_xref="GI:146305137" /db_xref="GeneID:5106281" /protein_id="YP_001185602" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="protein of unknown function DUF1305" /translation="MDATHGAAAPALNRLSRGIREYSLFQAVQLVLERLKVAHPQLDD ERLYEYLEFQANPSLGFPGSDIDRVQFFEEHGELRARMRVNLVGLFGGGSPLPAFYSE QALGDSEDGNPTRDFLDLFNNRLQRLLLPIWQKYRYRASFQSGAMDAFSAHLFALIGL GSEQIRQAQELNWKRLLPYLGLLSLRAHSAALIESVLRYYFKHAELFIEQCLERQVVV LEEQRNRLGRANSLLGEDTVLGERVRDRGGKFRIHVRQLGWTRFHEFLPIGTGYQPLC ALVRFTLRDPLDYDIRLELRQDEIRDLRIGEGNPCLLGWTTWLGRENADGLVTLGSKI H" gene 92959..95559 /locus_tag="Pmen_0097" /db_xref="GeneID:5106282" CDS 92959..95559 /db_xref="GI:146305138" /db_xref="GeneID:5106282" /protein_id="YP_001185603" /localization_and_confidence="Cytoplasmic, Class 3" /product="ATPase AAA-2 domain protein" /translation="MINVDLQQLVQALDAASKRDLEMAAERCVVRGGNKILVEDLLLG LLERPESLLARALQDAEIDAGELAQALQPRGEHSESRNPVFSAELVQWLQDALLVANL ELGASQIDQAALILALLRNPMRYAGSRYQTLLSKLNAERLRDFALSQQPQAAGGKAAA PGESNLARFTHNFTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKT AIVEGLALRIATGEVPQVLKGVELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPK PIILFIDEAHTLIGAGGQAGSGDAANLLKPALARGELRTIAATTWSEYKKYFEKDPAL ARRFQPVQLHEPTVDEAVTILRGLAPVYEKSHGIYLRDDAVVAAAELSARYLAGRQLP DKAVDVLDTACARVRISLAAAPEALERLRGEIAEGERQGEAMRRDLDAGLSIDGEALD ALETRLVAARAELEQVETRWAIQRDLAERLLEQRKQCAAARLAGDAEETDEPRASLEE LEAELRALQAELAAAQASERLVSFEVCPRLVAEVISHWTGVPLSQLAREHNTKVITFA DDLRQRVRGQEQAIQALDKAMRATAAGLNRPDAPVGVFLLVGPSGVGKTETALALADL LYGGERFLTVINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEV EKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMTSNLASERIASLCAGGERPGA EDLELAIRPQLTQHFKPALLGRMRVVPYYPMDGDLLRQLVGLKLARFGERLARRQLAF SHCDGLVEHLAERCTHGDSGARLIDHLIDQHLQPLVVDRLLDAMASGETLQQVRATLN GEGTVVCEFA" gene 95546..97078 /locus_tag="Pmen_0098" /db_xref="GeneID:5106283" CDS 95546..97078 /db_xref="GI:146305139" /db_xref="GeneID:5106283" /protein_id="YP_001185604" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="transcriptional regulator, Fis family" /translation="MSSLNPSLMFSQIPQPLRYAEALLQRFAQLARHASADALLGGLV EAAAQLSASELSQLYLLDATHTRLTLSAEWQDGQLQRRAEASLPSDYDGEQLLQYCLC QNQLLSLTELDSSLHSIGFLPESGQPWRSLLCQPLLDEHRQVNGLLLIASHKPRELQG FAGSLGQLGGFAIAQLHLLQRLRAPQSEAATQPTPSCASGYGLIGDSPAMRNVYQLIG KVLHNSVSVLLTGETGTGKELVARAIHDCGSRRSKAFVVQNCASLPENLLESELFGYR KGAFSGADRDHQGLFDAANGGTLFLDEIGDMPLSLQAKLLRVLQEGEVRPLGSTRTHK VDVRIVSATHHNLRSLVEEGRFREDLFYRLSHFPIELPPLRARGEDILRLARHFAVEA ACFLQRDAYRWSEAALEHLAGYAFPGNVRELKGLIARAVLLCEGGELLPEHFSLEQTP SEGSAPLSLRERMDRVERNLLLDCLRKNRGNQTNAANELGLPRRTLLYRMQRLKISPS EV" gene 97126..97260 /locus_tag="Pmen_0099" /db_xref="GeneID:5106284" CDS 97126..97260 /db_xref="GI:146305140" /db_xref="GeneID:5106284" /protein_id="YP_001185605" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MLHRYRTAALLALALVLAGCTGNYKFSDDQYRPLGDPQAEKRGH " gene 97281..98477 /locus_tag="Pmen_0100" /db_xref="GeneID:5106285" CDS 97281..98477 /db_xref="GI:146305141" /db_xref="GeneID:5106285" /protein_id="YP_001185606" /localization_and_confidence="Unknown, Class 3" /product="putative FHA domain containing protein" /translation="MELVFEMVSAQQFVPGLLTTKTFKQAGGVIGRAEDCDWVIPDRK RILSSRHAEVSYRDGAFYLTDTSSNGIALKDSGASLAKGRPQRIEHGSVYCLGDFEIR ARLIQDPAMFEGDIGLPQAAGSIIPDDAFLDLDPLTALEQQERVYAEVDDLTAVLRPS TAQAQQRDYAQIDEENLLVPELVMPTPPAQPKPAPEPERLPPSFWEKFADALGVRLDD LDDDAREALALNAAKLLRQSVGSLQQALRTRGELKNELRLALTTVQGAGNNPLKHGLD SGETLTALLRGGKPGQLPAEQAISRGFRDLQAHQVALLAASRAAVKGMFEQFAPEQLA MRFERNGRKPLLATAGSRWRAYRRLHADLAQNDDWSDRLFTRDFASAYEEQVRLIATL NTDLQG" gene 98483..98965 /locus_tag="Pmen_0101" /db_xref="GeneID:5106286" CDS 98483..98965 /db_xref="GI:146305142" /db_xref="GeneID:5106286" /protein_id="YP_001185607" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MPRLLSLAFIAALLSLAGCAALSPYSSMTKLDLSLAGSDQLNPD LHGRPSPIVLRLMELKHPVAFENADFFSLYQRPKEALAPDLVTLEELELRPGETRELK LSVGEGSRYVGVLAAYRDLPEANWRYVIAIDEQQRNQARLRLDERGIRNLDAEQERSR " gene 98962..100293 /locus_tag="Pmen_0102" /db_xref="GeneID:5106287" CDS 98962..100293 /db_xref="GI:146305143" /db_xref="GeneID:5106287" /protein_id="YP_001185608" /localization_and_confidence="Cytoplasmic, Class 3" /product="protein of unknown function DUF876" /translation="MSQHKVIWQEGMLLRPQHFQQNDRYFEHQLKVRTQKLDSYAWGF FELEIDRQFLNMGKLVVSKASGVLPDGSLFDLGAEREPLGLDVPPNTGNTPVYLALPL VTGNHIESRRPEQKDVLARYVAFDEEVADCNAGGSSHSQVSTGRPDFRLLLGEQQSDQ AYVKLKLCEVLDTTPDGVISLDPEFSPTYVNFQASGYLLSCLKEVISMLAHRGDILAE RIRATGKVGGAEVGDFMMLQLINRYEPILRHHLGVEQVHPEQIYRELVGLLGELATFS SETKRPRLEGRYLHSDQGMSFRKLMDAIRQVLSMVLEQHAIEMLLQQRQYGIQVSPLH DHKLLGTSSFVLAASAQCDSEELRQRLPAHLKVGPVERIRQLVNLHLPGIKVKPLPVA PRQIPFHSGKTYFALELSSEELAQLERSGGFAFHVSGEFSGLELKFWAIRN" gene 100296..101177 /locus_tag="Pmen_0103" /db_xref="GeneID:5106288" CDS 100296..101177 /db_xref="GI:146305144" /db_xref="GeneID:5106288" /protein_id="YP_001185609" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MTIKEMEYGQDDKTVILNRKGEARAESPLTDFSAPPKFEQLEER MIFAARLRPAESFNISLNPLVAAASALLSEVVRLKHSFESEDLDALNQRLTREIKLFE HRALHDGAESSQVMAARYVLCTVVDEAVVTTPWGNESQWSQMSLLSSFHNETFGGEKF FQLLERLSRNPVKHLPMLELMYLCLSLGFEGKYRVLPRGMLELEAVRDSLYRQIRQLR GDVPREVSPHWQGLKDTRRRLVRIVPWWLVALFTLMCLVMMYAGFAWVLGEQRDTVLK PYQQLDPASGVSMDDVK" gene 101174..104713 /locus_tag="Pmen_0104" /db_xref="GeneID:5106289" CDS 101174..104713 /db_xref="GI:146305145" /db_xref="GeneID:5106289" /protein_id="YP_001185610" /localization_and_confidence="Outer Membrane, Class 3" /product="ImcF domain protein" /translation="MKSFFAKLGAFFRKTWVWSLLLVLVLALLVWFVGPLLAVDDYKF WESATSRLLTISLLFLLWGLAMVFASWRATARKKAEENDAEAQERLRREEQIGEEQNE LRHRFKDALRTLKRSSLYRGRSEKWRNDLPWYLLLGPQGSGKTSLLDFSGLDFPLNRG DSQRLTKDVSGTRYADWYFADHAVLIDTAGRYLTQPDAQVDGRAWGTLLGLLRQRRAR PLNGVLVSIPVEQLQGGSEVELETLARQTRQRLHEIHQRLGADVPVYLVLSKADKVLG FDEFFDQLSREESEQVLGASFRKEQNASDVAVVRQEFEELLRRLNSQVILRMHQERDT QRRGRILDFPHQLGQIGERLCLFIELAFAGNRYQRASKLRGFYLTSAPQLNEQLDPLT AGIGRNLGLAGSALPTFRTGRARFINHLLSRVIFPEADLAGLDQKEVRRIDWGQRAMY ATAFAVLALFGVLWASGFSANHGRLEQLREIAQKLTREHQAINPQDDALQTLKALDSS YAATLVFPPKGEVSYLQRTGLFQGEAVNPAVYSTYRAELETLLLPRVARQLEAQIRAN LGDRERLLGSLRAYLMLNLEQRRDAAFLKEWVAADWSLRYAGNSPAQHGLNTHFARLL DESFAPYALNAQLVAQARQVLRSESLANVVYRMLREQARSLPDYRLSQKLGPQAGLIN GSDYAIPGFYTQAGYSKTFTAQGGNLVREILRDNWVLGEGESLSAGDLGRLMVELEQL YFRDYGNYWGEAIAQLSLEPIGSAGRGAALLGGLTAANSPLLQLLVEVRDNTRFKGLA EAADDAGAAAEALEGAKGKLGKAAKLASAAAEQAQQALAKNTPDTARKTLERRFEVLH KLLDDNGGAGVELAASLQALDELQRQLASLANAGASDQAAFEMAKARMAGKRDAINQV RSAAARLPQPVGNWLALLAEDSWTLVLNDAYHFLNQRYQSELYAAYDNSLKQRYPFSA HSESDVAVADFREFFKAQGIAERFFDQYLRPFVSGSADEYRLRRVDGRGLPLSREFLL QMSRAQVIRRSFFAENPAEPQVLFKLEPYSLDSSLSRADFRFGKQQLEYRHGPIVATA FRWPAASEEDRTSLVVEELGGRRVGIEKNTGPWSLFRLLDLMDVDYHSGRDVLILKAN LGGLHANYLLHSQRSPNPFDIGLLRSFKLPATL" gene 104713..105441 /locus_tag="Pmen_0105" /db_xref="GeneID:5106290" CDS 104713..105441 /db_xref="GI:146305146" /db_xref="GeneID:5106290" /protein_id="YP_001185611" /localization_and_confidence="Cytoplasmic, Class 3" /product="protein phosphatase 2C domain protein" /translation="MPAVVNAWRSAARTDTGKVRARNEDAFLALPEQGLWVVADGMGG HQNGALASRLIVEQLAELAQGSLEQRLVELRQALHRLNHRLGQELTVTADRPDTVIGS TVVALLLDGDRAACVWAGDSRCYLWRGARLYQLSRDHSLVQQLIDEQGLTPQEAARHP AAHALTRAIGASETLQLDILELDVLPGDVFLLCSDGLYQGVSADELGACLNLPSPHLA VERLFQRVLDGPARDNLSAVVIRQ" gene 105438..106409 /locus_tag="Pmen_0106" /db_xref="GeneID:5106291" CDS 105438..106409 /db_xref="GI:146305147" /db_xref="GeneID:5106291" /protein_id="YP_001185612" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="protein kinase" /translation="MIEAAEASDLTYFALAATAAREPVRETPRQAPGELPEVLGGRYR IERLLGVGGMGAVYRARDLLREQFGDPEPYVALKTLSDDFAEYPDANALLYSEFALTA RLSHPNVVRLFGFEVDIPSQRAFITLELLRGLTLDQLLCERPEGLPWDELRGIAIPLL EALCYSHQLGVLHGDLKPSNVMLAEDGLRLFDYGLGQPVEGLLPGLPRLCRSRIAAWT PRYAALELLEGAPLSAAADVYALACVLVELASGQHPFRRLSAKQAKSMELDRQLQRPA QVPLHCWQALRTALAFDESQRQIDCSELLDAFRRPPASRLRRWLGKA" gene 106434..108515 /locus_tag="Pmen_0107" /db_xref="GeneID:5106292" CDS 106434..108515 /db_xref="GI:146305148" /db_xref="GeneID:5106292" /protein_id="YP_001185613" /localization_and_confidence="Cytoplasmic, Class 3" /product="Rhs element Vgr protein" /translation="MLNPANETHFSLTIEGVEHDLQVLEFNGREAISQPYRFDVELIS ERPDLDLTSLLHQRAFLAFSPNGDGIHGLIHRVEQGESGKRLTRYRLAIVPQLAYLAH RTNQRIFQHLTVPQIIAQVLEEHGIVEGRYQFQLGPSVYPQREYCVQYDESDLHFVQR LCEEEGIHYHFQHSASGHVLTFGDDQTAFAKLGQPTPYIQDSGMTADDPVIKRLALRL ETRTRSTARRDYDFEQPRLLLEAAYQGEQAGENDGLPDLEDYDYPGRYTDRTRGKHLA KRALERHRADYQQLQGQSDQPRLVTGHLLEISEHPRREWNDLWLLTEVLHEGKQPQVL EESVLNLPSPPGRGAGGEGTSGDTDFTQGYRNRFLATPWDVPFRPPLVHPKPRVLGSQ SAVVTGPAGEEIHCDEYGRVKVQFFWDREGQADEKTSCWLRVSSSWAGDRYGAITIPR IGMEVLVTFLEGDPDQPLVTGCLYHAEHLVPYDLPANKTRSVFKTLSSPGGGGYNELR IEDRKGAEQIYIHAQRNWDENIEHDQKIRVGNERHDTVEKNSYTELLAEEHLTVTADR KVEVKPQDHLTVATDQHIKLGTAQLTKAGREIHLKAGQKMVIEAGIELTIKAGGSFIK LDPGGITISGPLARINAGGSPGKGSGLKIKPPVLPGMADSDKAGSLLEQAVGNALTPK AKPKRTLNFSG" gene 108566..111730 /locus_tag="Pmen_0108" /db_xref="GeneID:5106293" CDS 108566..111730 /db_xref="GI:146305149" /db_xref="GeneID:5106293" /protein_id="YP_001185614" /localization_and_confidence="Unknown, Class 3" /product="glycoside hydrolase, family 19" /translation="MADNKPINWAYPFKTAGEDSKEVSDPQIYLDALAKAKDGFYPMG ANGLWHGGVHFDDNTAGSLDQSSIRCIADGEVIAYRIDQRYPTTQYGDGRAVVHLPFS TGFVLVRHRLVLPSLPAPTAPGGEPGDTTTAATPTDTAASSAASTESATASEGLTFYS LYMHLLDWDSYKSATAPEPADFLAPTCYAVKSTTNDPLMGLRVRALNDDGTNKVLALL PKGCKVTLGEAHSIKTKYKKLLSIDEGMAIPALPAGTEGWVYEAELTDNTVADKATDT ESELTLSHQGVRVRREGKGNGTIIGVLPRGATLKVGEKQRSGYCKVLEVMDYRGVPAL PNGADGKPLGYVFFDALETQKTEPSALDSVHILPKPYSIKAGELVGHIGKYQNQDEGT AKKRLHLEVFTSEDVPAFIEKSRAIGEKLPDEQKTLIKVDKGSKIVQPAAADAQVEAS VDVRLCSDSPKAGCWAKVQKYAICNADKNSELGSYNSTKLTYTLGAAQKTILASRMGL NAADMPDQVDFLKVYSNSADGGDPHDYESGSIPSTHPWRKIGAVVGKPFWVKRSALNA QGRRTSTAGSLDAWSEFPLYSGLEGEASGYVRILPASSWDALPDERKAIDAEQVRWWY VTVGDMEGNDISGWAPEKDLIVTRHSPWEWPGFSTLQDKVSLDAHLARTLDAAGRATE EETESYAALIEEAERGPILSKLYEIIDQPDEKGVRDNKLTPEEFKAALAKPWLAQQLS LLISQHESEWFWNESKWNQLDKLMEHTPEDPNPQWLREKERIKTLSWWKELAGQPGIA ADGMAWHFQPIGLVESFKNSSSCCELSTDKFKAIFGERSIFSAWNMPRDSKAFNISIE EFVELINSGFKSYGFESCLHKAHFLAQCYHESDHFNTTIEYADGMDYDLATHPITVCD TYGADSRTCRRHHQIMAEGNTTVGDGPKYKGRGLIQITWKSAYQAFSTYSGVDCVSNP EIIGRNMNMAINASLWFWTIFKGENLNAKIERYYQELSGNASMSETQKDEEVVRRITA IVNGGDRGLSERKQLFKKIREQLK" gene 111727..112542 /locus_tag="Pmen_0109" /db_xref="GeneID:5106294" CDS 111727..112542 /db_xref="GI:146305150" /db_xref="GeneID:5106294" /protein_id="YP_001185615" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MRSNAIYLTLLMMCVEPALGDISYIPISEDIKINTGDFGIGCDM EETHISRAGKDIFIATGGINISIPIDIVGEDADVIVGDMSGNGHCDLAVPYGKSDVNE SYTLFVYDIPHEKFKKSNAGIISNPDFKENKIISSYRDAAQWHEDYFCYSKSLVDFFL CSQKKSIDNSLEWLRLCSEDLCASSTIIYKASSIQASAVVTADRAKLHDITNGNILKE RKGYLVKGDKVMLIDFLQTYEDAYYKVNYFNNKMITTGWVKGAQLVVNPVTEK" gene 112621..113043 /locus_tag="Pmen_0110" /db_xref="GeneID:5106295" CDS 112621..113043 /db_xref="GI:146305151" /db_xref="GeneID:5106295" /protein_id="YP_001185616" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MMRIFFVLVFSICFPLVVNGSESHMPIFMCKTKNNKNIEVYRDG DMVTYSFGRSDYPPELKLTRSMADLEVAIGSVSGNEISNSITFSNGVYAYRVMTTINK VSATQEPRHGVLVKKKTKYLAYIDCVPETVQGSLLDLE" gene 113171..113710 /locus_tag="Pmen_0111" /db_xref="GeneID:5106296" CDS 113171..113710 /db_xref="GI:146305152" /db_xref="GeneID:5106296" /protein_id="YP_001185617" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MQKGGQIYFWPRGGDSFGLNQAMNIRMKKRPLQHTAHQVLLCAL SCGYLAGCSALELETITYPEALTHYQEGGGIENYRCALVPADEQYQALPDSQPIAVEI DEVLLVKIDGSIQALQQTEITETLAAYAHAGMSARLSTLRQLNQTEYNESDDRHVDLT FEAGGKTTIYRTFGEACGL" gene 113794..114204 /locus_tag="Pmen_0112" /db_xref="GeneID:5106297" CDS 113794..114204 /db_xref="GI:146305153" /db_xref="GeneID:5106297" /protein_id="YP_001185618" /localization_and_confidence="Cytoplasmic, Class 3" /product="protein of unknown function DUF1311" /translation="MFGVNNKYSFFLLFFTFPALSDAIQKSCEVIEDSQQVAQCAEYA KGQSDKLLNSAYRAALDRIRHQYRQAPLMADQYISLLRGAQREWIKLRDADCKLEAFE IEETAEAYQVTINNCLARMSNDRADYLKHIAPDI" gene 114401..115450 /locus_tag="Pmen_0113" /db_xref="GeneID:5106298" CDS 114401..115450 /db_xref="GI:146305154" /db_xref="GeneID:5106298" /protein_id="YP_001185619" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MPRLHGNKRDRRHLALTSLLMLASVIAHAEAIRPEGLSALQELR IAEGNDDAQRLLITDRADKVVLDTGKVLPRIENEFSPNSYDGYLAELLAERQARATAI DLQGERHALLSPTTQAGDYLLLITREEDNGAYNFNLKFRYDGTTKSFALSQILLNEND TQCDQSLLSSYAMDSKALGATSIADFDGSRAFGTLRALRLAHQTSASTAEKLMPEAVA SNFDAALKACQAGNAQELKTLVGYFLSSDEDGACGPGNYIVEKYYFPQRVGWSNDLGF LFEQAGHYPEAVELLQHITRRHPDRVVANLNLADAYWALGEREQAREAYGQYHDKMLA AQKQARIPPRVLERK" gene complement(115461..115928) /locus_tag="Pmen_0114" /db_xref="GeneID:5106299" CDS complement(115461..115928) /db_xref="GI:146305155" /db_xref="GeneID:5106299" /protein_id="YP_001185620" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MKAAALLLLCLLSTAALALEPGERLAPWTLLDQHDVPYTLNDET RILLVARDMAGAKLVSAALEGKPKGYLEERQAVFLADISRMPGVIASLFALPKMRDYN YRILLDRDARIAPRYPAGEGEVLWLQLEDGRLLTQQAFKEAGALEQALAAERP" gene complement(115947..116483) /locus_tag="Pmen_0115" /db_xref="GeneID:5106300" CDS complement(115947..116483) /db_xref="GI:146305156" /db_xref="GeneID:5106300" /protein_id="YP_001185621" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="hypothetical protein" /translation="MRHLLLALLLCTGLAHAELPETDWLDLMPPEDRKALEEMPEISH DSPEGDSTFYSEGGLRQQDQDLPAVMYSTKTVTELDGKDIRLGGYPVPLESDEKGNST LFFLVPYPGACIHVPPPPPNQLVLVRYPRGIALEDIYAPLWVSGTLKVEKISNDLADA AYAMDAGEVRLVTDEDLY" gene complement(116572..116817) /locus_tag="Pmen_0116" /db_xref="GeneID:5106301" CDS complement(116572..116817) /db_xref="GI:146305157" /db_xref="GeneID:5106301" /protein_id="YP_001185622" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="Transglycosylase-associated protein" /translation="MGIIGTIFIGLIVGLVARFLKPGDDSMGWIMTILLGIGGSIAAT YGGQALGIYEAGEAAGFIGAVIGAVVLLVIYGAIKKG" gene complement(116883..117647) /locus_tag="Pmen_0117" /db_xref="GeneID:5106302" CDS complement(116883..117647) /db_xref="GI:146305158" /db_xref="GeneID:5106302" /protein_id="YP_001185623" /localization_and_confidence="Unknown (This protein may have multiple localization sites), Class 3" /product="ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like protein" /translation="MKRLLALLPMLVALTCVGAQEVLRVDFRERPPEMRAVDGIPSGP LISVLETAAQRIGVRLHWRQAPFLRSLDDLRSGRVDLVPRVLLTEQRREYIHFLPSIG NQQLNIRFVVHPGREAGLKRYEDLHRLSVGVKRGTVYFEPFDSDERLARVYASDDAQL AAMFRAGRLDTIAVLDMMPMEAQFTALGFEDFSYAHYAHRQVLGNHFGASLKRYRSDR RELYNRLAGELERMRDEGEVALIYRRYGVLPPDEAN" gene complement(117703..118788) /locus_tag="Pmen_0118" /db_xref="GeneID:5106303" CDS complement(117703..118788) /db_xref="GI:146305159" /db_xref="GeneID:5106303" /protein_id="YP_001185624" /localization_and_confidence="Cytoplasmic, Class 3" /product="phosphoribosylaminoimidazole carboxylase, ATPase subunit" /translation="MKIGVIGGGQLGRMMALAGTPLGMNFAFLDPAPDACAQALGEHI RADYGDQDHLRQLADEVDLVTFEFESVPAETVAFLSQFVPVYPSAEALRIARDRWFEK SMFRELGIPTPEFADIQSQTDLDAAVASIGLPAVMKTRTLGYDGKGQKVLRKPEDVTG AFAELGSVPCILEGFVPFTGEVSLIAVRARDGETRFYPLVHNTHDSGILALSIASTDH PLQALAEDYVGRVLDKLDYVGVLAFEFFEVDGGLKANEIAPRVHNSGHWTIEGAECSQ FENHLRAVAGLPLGSTAKLGESAMLNFIGEVPPVDKVIRIADCHLHHYGKAFKVGRKV GHATLRSADRATLNTGIAAVQALIAKG" /EC_number="4.1.1.21" gene complement(118788..119279) /locus_tag="Pmen_0119" /db_xref="GeneID:5106304" CDS complement(118788..119279) /db_xref="GI:146305160" /db_xref="GeneID:5106304" /protein_id="YP_001185625" /localization_and_confidence="Unknown, Class 3" /product="phosphoribosylaminoimidazole carboxylase, catalytic subunit" /translation="MSALVGVIMGSKSDWSTLSHTAEMLDKLGIPHEVKVVSAHRTPD LLFQYAEEAEARGIQVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSI VQMPAGIPVATLAIGKAGAVNAALLAASILGHQHPQFHAALKQFRDEQTNTVLENPDP RAQ" /EC_number="4.1.1.21" gene 119556..120578 /locus_tag="Pmen_0120" /db_xref="GeneID:5106305" CDS 119556..120578 /db_xref="GI:146305161" /db_xref="GeneID:5106305" /protein_id="YP_001185626" /localization_and_confidence="Cytoplasmic, Class 3" /product="Alcohol dehydrogenase GroES domain protein" /translation="MNPTMKAAVVHAFGQPLRIEEVKTPLPGPGQILVKIEASGVCHT DLHAAEGDWPVKPSLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGVPWLYSACGCCEHC LTGWETLCESQQNTGYSINGGYAEYVLADPNYVGILPKNVDFLEIAPILCAGVTVYKG LKETRARPGQWVVISGIGGLGHVAVQYARAMGLHVVAVDVDDAKLELARRLGASLTIN ARQENPAEVVQREIGGAHGVLVTAVSNAAFGQAIGMARRHGTVALVGLPPGDFPTPIF DVVLKAISITGSIVGTRADLQEALDFAGEGLVRATVHSDRLDNINAIFEQMRQGQIEG RMVLQF" gene 120683..121477 /locus_tag="Pmen_0121" /db_xref="GeneID:5106306" CDS 120683..121477 /db_xref="GI:146305162" /db_xref="GeneID:5106306" /protein_id="YP_001185627" /localization_and_confidence="Unknown, Class 3" /product="hypothetical protein" /translation="MKQYVSLVALSLLSLQAAALELARHPQVFDAGQGVSLTLAPTAD GKQALVQVKGINHPLDEVVFLTQVRELGNEQRDYGIRLDGRDYNLLNKRRAWSGESFQ LNLPGTEGFELGYNETKTKALKQSELLALYKRQEKAGLQARLAAFDRKKRVQDYSARL QQMDREATQACGTPLATRVDWSAFNDDLLMSVSVPHFCGEVVSQMASLCGRADSYKSE ASTIKGVECRFGDSMKLREHDGQLSFTTLKDEPNQGDFINAILRNR" gene 121557..122549 /locus_tag="Pmen_0122" /db_xref="GeneID:5106307" CDS 121557..122549 /db_xref="GI:146305163" /db_xref="GeneID:5106307" /protein_id="YP_001185628" /localization_and_confidence="Unknown, Class 3" /product="helix-turn-helix- domain containing protein, AraC type" /translation="MLHAPLTTLHVVSLILQRFADQPELQPQLLAGSGIGAAELECPD ARITRVQELQVCANALALRADMGLELGRSLHVSSYGLLGYAALSAATFGDAWRLLLQY PALLGTYFRLELQVEGELAWICAGGYRDAATLEVFNVEMCLASLKLIGDELLGQPLAL ARAEFSYAEPHYVERYAQSFPCPLRFAARRNAFAFPAALLERRLPLADSVTHGDMVER CRRLNAEFSSRQAWLERVRQLLAVQLAEPPGLENLAQQMHCSPRTLRRHLQELGTSYQ GLLDELRFERAKALLSEEQWPVYRIAEVLGFSETASFRHAFQRWSGVPPSRFRA" gene 123150..124178 /locus_tag="Pmen_0123" /db_xref="GeneID:5106308" CDS 123150..124178 /db_xref="GI:146305164" /db_xref="GeneID:5106308" /protein_id="YP_001185629" /localization_and_confidence="Cytoplasmic, Class 3" /product="histone deacetylase superfamily" /translation="MLTYYSDDHHLHHGKCELIDGQLMPCFEKPQRADHILQRVKDRQ LGEIRAPKDFGLAPIERIHSKAYLEFFKGAWARWQEQGGKGDLLPFTWPARTLRRMIP NDLHGQLGYYSFDGGAPITAGTWQAAYSAAQVALSGQAEIANGAHSAFALCRPPGHHA AGDVMGGYCYLNNAAIAAQAFLDQGRKKVAILDVDYHHGNGTQDIFYRRSDVLFASIH GDPAEEFPFFLGYADELGEGAGEGYNFNYPLPMGSSWDTWNAALEQACQRIADYGAEV LVVSLGVDTYMEDPISQFKLDSPDYLAMGRRIAALGLPTLFIMEGGYAVEAIGVNAVN VLEGFEGA" gene 124242..125336 /locus_tag="Pmen_0124" /db_xref="GeneID:5106309" CDS 124242..125336 /db_xref="GI:146305165" /db_xref="GeneID:5106309" /protein_id="YP_001185630" /localization_and_confidence="Periplasmic, Class 3" /product="extracellular solute-binding protein, family 1" /translation="MKAIKQMLGVALCGATLLSGAVQAKELRVYNWADYILPEVPKDF QRESGIRITWDTFETNEALEAKLLTGNSGYDLVIPSNQFLETQIKAGVFAPLDKSKLP NWKNLDPVLLGLLEKNDPGNQYGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFK PEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPNSSNPADYDKVTELLLKVRPYVAYF HSAKYMTDIANGDICVAIGYSGSFYQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAI PKSAQNVDEAHAFINHLLDPKVIAPISDFLGYPNPNVPGMQLVGAEIADDADLTPTPE LQKSLYVVQPLPQKIERVRTRAWTSIKSGK" gene complement(125368..126345) /locus_tag="Pmen_0125" /db_xref="GeneID:5106310" CDS complement(125368..126345) /db_xref="GI:146305166" /db_xref="GeneID:5106310" /protein_id="YP_001185631" /localization_and_confidence="Cytoplasmic, Class 3" /product="transcriptional regulator, AraC family" /translation="MKVTVVMAERCSATSVSAALEFLECANVLQRFLTGDPAATPFEV HSASLDGAPVECTGGLRLTPQRALSEVPHSDLVIVPGFMFNILAVLPALEPLSAWLRE RHAQGSYIASMCTGTFVTAQAGLLDGRRATTHWIFSEQFARRFPRVLLQAERSVTDDG QLLCSAGSTTGSDLLLHIIRRFASPQLAIECSKKLLVDSAERLQTPYMSASFNKTHQD AEVLRVQIWLEKHSAERIVLDEVAARFALSPRNLIRRFKDATGQTPVQYLQNLRLERA KHLLEASQENFERITQQVGYEDGSSFRRLFKERVGLSPGAYRRRFNRPT" gene 126485..127327 /locus_tag="Pmen_0126" /db_xref="GeneID:5106311" CDS 126485..127327 /db_xref="GI:146305167" /db_xref="GeneID:5106311" /protein_id="YP_001185632" /localization_and_confidence="Unknown, Class 3" /product="Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein" /translation="MKHTAYRLFKKPFFGRFMKPWRWPEQVDAARWQRLALTSESGAN LAALLGEARAGQVRGAVLLCHPMGAAAKGFWLKHGHAELLRAAGYHVMLFDLNGFGES SSTTMDYPLDVLAAGQALQARYPDLPVALLGASMGAAMGLCALALAQHPFKAAVLESA FPTLLHFWRPYPLPRLGIQLSRLVYPAGERRLRPLHAAQRLVGRPPLLLIYGEEDRHT PLADGQQLHAALTAATHCEFWQVPGADHTLAYVAQPEAYARRVLEFLDGQLGAAAGSA STAA" gene complement(127469..128371) /locus_tag="Pmen_0127" /db_xref="GeneID:5106312" CDS complement(127469..128371) /db_xref="GI:146305168" /db_xref="GeneID:5106312" /protein_id="YP_001185633" /localization_and_confidence="Cytoplasmic, Class 3" /product="transcriptional regulator, LysR family" /translation="MNLETKWLEDFIALAATRSFSQAADKRFVTQPAFSRRIRSLEAM LGLTLVDRSCTPIELTEAGRLFLVTARSLVEQLGEVVRHLHNLEGQQGEVLSIAAAHS LTLGFFPEWIARLRREGLPLTTRLVATNVGEAVHSLREGACDLILAYYDPDAALQMDP EIFPSLHLGTTSMLPVCAVGEAGAPLFDLDGGQSVPLLAYSAGAFLGRSVNLLLRQRA LRSTTVYETAMADSLKSMALQGMGVAWVPRLSVTAELGRGELAICGGEHWQIPLEIRL YRCALVRKAAVRLLWRKLEGGLAM" gene 128663..130087 /locus_tag="Pmen_0128" /db_xref="GeneID:5106808" CDS 128663..130087 /db_xref="GI:146305169" /db_xref="GeneID:5106808" /protein_id="YP_001185634" /localization_and_confidence="Cytoplasmic, Class 3" /product="aspartate ammonia-lyase" /translation="MSSAASVRVEKDLLGTLEVPADAYYGIQTLRAVQNFRLSGVPLS HYPKLVIGLAMVKQASADANRELGHLSAAKHTAISTACARIIQGEFHEQFVVDMIQGG AGTSTNMNANEVIANIALEAMGHEKGQYQHLHPNNDVNMAQSTNDAYPTAIRLGLLLG HDSLLSALDKLIQSFAAKGLEFGHVLKMGRTQLQDAVPMTLGQEFRAFATTLGEDLQH LKLLAPTLLTEVNLGGTAIGTGINADPKYQALAVKRLAIISGHPLTPAADLIEATSDM GAFVLFSGMLKRTAVKLSKICNDLRLLSSGPRTGINEINLPARQPGSSIMPGKVNPVI PEAVNQVAFEVIGNDLALTMAAEGGQLQLNVMEPLIAYKIFDSIRLLTRAMDMLRELC IDGITANETRCRELMENSIGLITALNPYIGYENATRIAKVALESGRGVLELVREEQLL DEATLADILRPENMIAPRLVPLQG" gene 130216..131469 /locus_tag="Pmen_0129" /db_xref="GeneID:5106809" CDS 130216..131469 /db_xref="GI:146305170" /db_xref="GeneID:5106809" /protein_id="YP_001185635" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="sodium:dicarboxylate symporter" /translation="MSQSNTASLSLLARVPLWQQILVGLVLGVVVGMLSKSLALALAP VGALFLNAIKMLIVPLVFVSLVAGITAMSDSAKLGRISVKTIAIYLITTAFAVSIGLA FGTLFSPGEGMNMVASGSEEAKQAPSLVQILVGLVPTNPVTAFAEGNILQIIVFAIAL GVSMNLIGEKAAPVAKLFDSLAEVFYKLTDLVMRFAPIGVFALIAGVVASHGIEVLLP LAGVIGVIYLASIAHMLLIYGGLIGGLARLSPLRFFRGIAPALAVAFSTSSSSGTLPV SIECARKNLGVSQGVAGFVLPVGATINMDGTAIYQGVLALFIAQAFGIDLNAGQYLMI ILTATLASVGTAGVPGAGLIMLGLVLTSVGLPLEGVALIAGIDRILDMARTTVNVAGD LMTTTLVGSSEKELDREIYNSDNAA" gene complement(131600..133072) /locus_tag="Pmen_0130" /db_xref="GeneID:5106810" CDS complement(131600..133072) /db_xref="GI:146305171" /db_xref="GeneID:5106810" /protein_id="YP_001185636" /localization_and_confidence="Cytoplasmic, Class 3" /product="putative transcriptional regulator, GntR family" /translation="MRRSPALPFDLSGIHLQPGQGLARQLYQALRERILDGRLAGGTR LPASRELAALLGISRNTVTRALDQLYAEGYVNGRVGDGTYVAELTRHRPAPVPVAAVA PTAASPAMQLLHNHHLAMPAAGAPRAFRIGVPAFDLFPFETWSRLQVRFWRKPSLARL GYGDPAGDLQLRELIAAYLRNSRGLTCEAPQVLITCGSQQAISLCAQLLIQPGERVAI ENPGYRAAGHAFAVAGAQLCGVAVDGDGLDVDALQRLNECRLAYVTPAHQYPTGVTLS LPRRLALLEWAKRVNGWIIEDDYDGEYRYSGTPLAPLAALDEQQRVIYIGTFGKLAFP ALRLGYLVLPPALAESFARRQALEIRHSEVGTQAVMAEFIAAGHFQRHVRRMRQAARS RRDALIEAWPQAIPGCSPLPAVEAGLHLSIRVESLARERELIGSARAAGIEMNPLSGY WLPGSDTAEDARAGLVLGFAAVPEAQIVEAVQTLRRAWKL" gene 133170..133802 /locus_tag="Pmen_0131" /db_xref="GeneID:5106811" CDS 133170..133802 /db_xref="GI:146305172" /db_xref="GeneID:5106811" /protein_id="YP_001185637" /localization_and_confidence="Unknown, Class 3" /product="FMN-binding negative transcriptional regulator" /translation="MYCPAAFRQDDLPTLHAQIHASGLAIVTSSGAQGLQASHLPLLL EPGEGEFGTLYGHFARANGHWRDLAAGAEALVVFSGADAYVHPGWYAAKAEHGKVVPT WNYIAVHAWGQAEVFDEPERLLELVSRLSERHEQGRPQPWAVSDAPRDYIDSMLRAIV GFALPIRRLEGKWKLSQNRSSNDQAGVRAGLATSASPRDQELAAQMNPTD" gene 133822..134262 /locus_tag="Pmen_0132" /db_xref="GeneID:5106812" CDS 133822..134262 /db_xref="GI:146305173" /db_xref="GeneID:5106812" /protein_id="YP_001185638" /localization_and_confidence="Unknown, Class 3" /product="GCN5-related N-acetyltransferase" /translation="MLDIRPITAADHAVWLPLWQAYQRFYQAEIPAETSALTWRRFLD PAEPMHAALAWQDGEAVGLVHFIYHRSCWTSGDYCYLQDLFVAEHIRGGGIGRALIEH IYAEARAAGASRVHWLTQESNYQGRMLYDRIGDRSGFIQYRKLF" gene 134262..134933 /locus_tag="Pmen_0133" /db_xref="GeneID:5106813" CDS 134262..134933 /db_xref="GI:146305174" /db_xref="GeneID:5106813" /protein_id="YP_001185639" /localization_and_confidence="Unknown, Class 3" /product="GCN5-related N-acetyltransferase" /translation="MTRDLAHWQPRPTPDQRVLQGRFVRLEALDVTRHGEDLWRALQG PDPALWDYLPYGPFIERGVFDTWLAGNAQSRDPLFYAVVDLASGRALGLFSYLRITAQ DGSIEIGHVAFGAPMQRTPGATEAVYLLARHAFDDLGYRRLEWKCDAANARSLRAAER FGFIREGLFRQHMVRKGRNRDTAWFSIIDGEWPACREAFARWLAADNFDEAGRQKQRL EALRG" gene complement(134938..135756) /locus_tag="Pmen_0134" /db_xref="GeneID:5106814" CDS complement(134938..135756) /db_xref="GI:146305175" /db_xref="GeneID:5106814" /protein_id="YP_001185640" /localization_and_confidence="Cytoplasmic, Class 3" /product="helix-turn-helix domain protein" /translation="MSDSLGSNLKLLCSHYRSIAEVCRKLSINRAQFNRYLAGQSRPT AHNLKRICDFFGVEPFELSMPAEQFARLIGARSGDTQVHGGSDPLLELFDPLRQQASP MGRYCGYYFEYSNCMSVPGHVLLSLVHLREERGNYLFERQERQERQEHTRGGAEDWVR CRYLGAAFFLQDRLFLVDYESLTGNEISQTILIPSFKSRITRLNGIKTGVSSGDRRTP ACTRVVWQYLGNEINRVNAYRQLMLYAPDDARIDDDIRQRLGGAQLRDGLFEME" gene 135917..137359 /locus_tag="Pmen_0135" /db_xref="GeneID:5106815" CDS 135917..137359 /db_xref="GI:146305176" /db_xref="GeneID:5106815" /protein_id="YP_001185641" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="amino acid carrier protein" /translation="MLDLLNDLIWSKLLIVMLIGLGLYFSIASRFVQFRYFGNMFRIF REAFQRQPGQLSSFQALMLSVAGRVGAGNIAGVSVAIMLGGPGAIFWMWVVALVGMAT SYFECSLAQLYKRREADGGYRGGPAFYIQHGLGQRWLGILVSILLLVTFGFGFNAVQS FTVASSLHDTFGIPTLVSGIALTVVIGLIIFGGIKRIAQFADVLVPVMAFSYIGMAVL VIGMNISEVPATFALIVKSAFGLEPAFAGGIGAAIIMGVKRGLFSNEAGLGSAPNVAA VAEVKHPVAQGIVQSLSVFIDTLILCSCTALIILLSGVYQPGMEQAGVVLTQSAVAAV VGEWGRVFISLALLLFVFTTLIYNYYLGENALGFFSQKRGPVMIYRVLVVGLVLWGSV QDLGTVFAFADVTMGLLAIANLIALALLFKVGLRLMRDYDSQIKAGVDSPVFDAKQFA DLDLDPSVWGAQASKPVADQAEIGDRVHQR" gene 137521..138510 /locus_tag="Pmen_0136" /db_xref="GeneID:5106816" CDS 137521..138510 /db_xref="GI:146305177" /db_xref="GeneID:5106816" /protein_id="YP_001185642" /localization_and_confidence="Cytoplasmic, Class 3" /product="Asparaginase" /translation="MATPENLLVLYTGGTIGMQMSADGLAPASGFEARMRAQQASENT GELPNWQFRELLPLIDSANMNPGHWLALRDQIVAAVEQEGHDAVLVLHGTDTLAYSAA ALSFLLLGLDVPVLLTGAMQPAGVAGGDAWPNLFGALRALHRGVQPGVHLYFNGQLLH GVRCSKLRSDAFDAFQVLPRLRQAERAAIDARIDYRQPRQAANLAVLPLHPALQASHL RALLESGIQGLLLECYGSGTGPAGDAELMAVLHEAHARGVVLAAISQCPQGHVQFGVY AAGSRLAEAGLVSCGGMTREAALGKLFALLGAGLTQAEVEHWLARDLCGEMSD" /EC_number="3.5.1.1" gene 138539..138982 /locus_tag="Pmen_0137" /db_xref="GeneID:5106817" CDS 138539..138982 /db_xref="GI:146305178" /db_xref="GeneID:5106817" /protein_id="YP_001185643" /localization_and_confidence="Unknown, Class 3" /product="GCN5-related N-acetyltransferase" /translation="MSLEIRPVSAADHEAWLPLWQGYQRFYMTDIPAEASAVTWQRFL DPAEPMGAALAWQDGEAVGLVHWVIHRSTWTVGDYCYLQDLFVAKGQRSSGVGRQLIQ HVYDQAREAGCSRVHWLTHESNSQAMLLYERIGERSGFVQYRKLL" gene complement(138990..139385) /locus_tag="Pmen_0138" /db_xref="GeneID:5106818" CDS complement(138990..139385) /db_xref="GI:146305179" /db_xref="GeneID:5106818" /protein_id="YP_001185644" /localization_and_confidence="Unknown, Class 3" /product="Endoribonuclease L-PSP" /translation="MSMPEYHMFATAPAPVAPFSHACEADGWVFITGQLPIDPGNEAA PLPEGIEAQTHKTFDNLLVVLEGLGLGLENVVSARAFLTDFYGDYARFNVVYASYFPE DKRPARTCIGTTGLARHALVEIDFIARRP" gene complement(139457..140365) /locus_tag="Pmen_0139" /db_xref="GeneID:5106819" CDS complement(139457..140365) /db_xref="GI:146305180" /db_xref="GeneID:5106819" /protein_id="YP_001185645" /localization_and_confidence="Unknown, Class 3" /product="Glutaminase" /translation="MQALLTEILDEVRPLIGQGKVADYIPALAGVVPDQLGIAVYGND GQLHVAGDARTPFSIQSISKVFSLVQAIGHSGEAIWQRLGHEPSGQPFNSLVQLEFER GKPRNPFINAGALVICDINQSRYAAPALSMRDFVRRLSGNPEVTVDNHVAESEYQHRA RNAAAAYLMQSFGNFHNEVEAVLRSYFSCCALRMSCVDLARAFGFLANQGFCQHSGEQ ILSPRQSKQINAIMATSGLYDEAGNFAYRVGLPGKSGVGGGIVAVVPGQFSVCVWSPE LNAAGNSLTGIKALELLSERIGWSVF" /EC_number="3.5.1.2" gene 140508..141437 /locus_tag="Pmen_0140" /db_xref="GeneID:5106820" CDS 140508..141437 /db_xref="GI:146305181" /db_xref="GeneID:5106820" /protein_id="YP_001185646" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="Auxin Efflux Carrier" /translation="MSTVLNVLLPIFGLILVGYICRRSNRLGPTAASEMNRFVVWLGL PALLFSLTAKADWAHIWQPGFLLAFTGGTLAVFLLTLAYRWKTTGSLVDASIDGLSAG YANTGYIGIPLCVLVLGEDGMAPALIASLIVVCLLFALAVVCIEVGLQSQKGLGGAIA QVSLALLKNPLVVAPVLGALWSFGGLSLAPALDEFLRLLGAATVPCALVSLGLFLAQR QSGPAKGAWPLVALKLALQPLVTWFIAFVLLDLPPFWAHAALLLSALPTGTGPFMLAE YYQRQAALVSRAILFSTLGSLLTLSLILLLITP" gene complement(141427..142068) /locus_tag="Pmen_0141" /db_xref="GeneID:5106821" CDS complement(141427..142068) /db_xref="GI:146305182" /db_xref="GeneID:5106821" /protein_id="YP_001185647" /localization_and_confidence="Cytoplasmic, Class 3" /product="hypothetical protein" /translation="MNTAAVRQSIAQAQQHEVSSQALARFLQAQLERLHPSIRLPEED ASGALSAFVSAYIEQVPEVLDAAVEVAREAGIEDAVKPVLKIAEHFFLQPPPLIDGHE GLEGLLDEAYLAHRLVEEVNDRYITHLGQPLIPLDTTRANLIAHQLIGEPFANQLDEA VHHALAGMLDDASFDQPSVQAYRERLAAPDTVSAWRRWPCLSQQLGLELQLKA" gene 142477..143601 /locus_tag="Pmen_0142" /db_xref="GeneID:5106822" CDS 142477..143601 /db_xref="GI:146305183" /db_xref="GeneID:5106822" /protein_id="YP_001185648" /localization_and_confidence="Cytoplasmic Membrane, Class 3" /product="cytochrome c oxidase, subunit II" /translation="MMRHPRVWMGLLLWLALGSAHAQWTVNMAPGVTEVSRSVFDLHM TIFWICVVIGVIVFGAMFWSMIMHRRSTGQEPAHFHESTTVEILWTVVPLAILVLMAI PATKTLIEIYDTSESELDIQVTGYQWKWHYKYLGQDVEFFSNMSTPRSQINNREAKGE HYLLEVDEPLVVPVGTKVRFLITAADVIHSWWVP