Strain	Refseq Accession (Replicon)	Replicon Name	Locus Tag	Feature Type	Start	Stop	Strand	Gene Name	Product Name	Product Name Rating	Refseq Accession	GI	Entrez	Alternate Gene Name(s)	Alternate Product Names	Comments	References	Genomic Context	Homology	Structure Features	Pathways	EC Number	PseudoCAP Function Class	Subcellular Localization (Localization[Localization Confidence]	Gene Ontology Mappings(NameSpace|Accession|Term|Evidence Code)	TIGRFAM Predictions Using HMMER (Accession|Name|Function|IsologyType|Significance|EC Number|Role|Sub-role)	PFAM Predictions (Accession|Name|Start|Stop|E-value)	COG Predictions (Accession|Name[Category])DNA Sequence	Protein Sequence
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0001	CDS	147	1019	-	parB	chromosome partitioning protein ParB		NP_742171	26986746	1043468			identified by match to PFAM protein family HMM PF02195								Cytoplasmic[Class 3]	biological_process|GO:0000910|cytokinesis|IEA ; biological_process|GO:0007059|chromosome segregation|IEA ; molecular_function|GO:0003677|DNA binding|IEA	TIGR00180|parB_part|ParB-like partition proteins|domain|2.8e-57||No Data|No Data	PF02195|ParBc, ParB-like nuclease domain|39|127|2e-19	COG1475|Spo0J, Predicted transcriptional regulators [Transcription]. ; COG1475|Spo0J, Predicted transcriptional regulators [Transcription].	ATGGCCGTCAAGAAACGGGGTCTCGGACGTGGGTTGGATGCACTGCTCAGTGGTCCTTCCGTCAGCGCGCTCGAAGAGCAGGCTGTGAAGATCGACCAGAAAGAACTGCAACACCTGCCGGTCGAGCTGGTCCAGCGCGGCAAGTATCAGCCTCGCCGGGACATGGACCCGGAGGCGCTGGAAGAGCTTGCGCACTCGATTCGCAACCATGGTGTGATGCAACCGATCGTGGTACGCCCGATTGGCGACAACCGATACGAGATCATCGCCGGTGAGCGCCGTTGGCGCGCTACCCAGCAGGCCGGCCTGGACACGATCCCGGCCATGGTCCGCGAAGTGCCCGACGAAGCCGCCATCGCCATGGCATTGATCGAGAACATCCAGCGCGAAGACCTCAACCCACTGGAAGAGGCCATGGCCCTGCAGCGCCTGCAACAGGAATTCGAACTCACCCAGCAGCAGGTGGCTGACGCTGTGGGCAAGTCGCGGGTGACTGTGGCCAACCTGCTGCGCCTCATCACCTTGCCCGATGCGATCAAGACCATGCTCGCCCACGGTGATCTGGAGATGGGGCACGCCCGTGCATTGCTGGGCCTGGACGAAAATCGTCAGGAGGAGGGGGCGCGTCATGTTGTCGCACGTGGCCTCACCGTGCGCCAAACCGAGGCACTGGTCCGTCAGTGGCTCAGCGACAAGCCTGATCCGGTCGAACCGAGCAAACCTGATCCGGATATCGCACGCCTTGAACAGCGGCTCGCAGAGCGCCTGGGCTCGGCCGTGCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGA	MAVKKRGLGRGLDALLSGPSVSALEEQAVKIDQKELQHLPVELVQRGKYQPRRDMDPEALEELAHSIRNHGVMQPIVVRPIGDNRYEIIAGERRWRATQQAGLDTIPAMVREVPDEAAIAMALIENIQREDLNPLEEAMALQRLQQEFELTQQQVADAVGKSRVTVANLLRLITLPDAIKTMLAHGDLEMGHARALLGLDENRQEEGARHVVARGLTVRQTEALVRQWLSDKPDPVEPSKPDPDIARLEQRLAERLGSAVQIRHGNKGKGQLVIRYNSLDELQGVLAHIR
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0002	CDS	1029	1820	-		ParA family protein		NP_742172	26986747	1043469			similar to GB:V00540, GB:J00212, GB:M12350, GB:M28586, GB:M10201, SP:P01568, SP:P05014, PID:184655, PID:306905, PID:306906, PID:306912, PID:32717, PID:32725, PID:758078, and PID:825603								Unknown[Class 3]		TIGR01969|minD_arch|cell division ATPase MinD|subfamily|2.4e-10||No Data|No Data	PF00142|Fer4_NifH, 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family|11|46|2e-05	COG1192|Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]. ; COG1192|Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	ATGGCTAAGGTATTCGCAATCGCGAACCAGAAAGGTGGTGTGGGCAAGACAACCACCTGTATCAATCTCGCCGCCTCGCTGGCTGCGACCAAGCGTCGTGTCCTGCTGATCGACCTCGATCCGCAGGGCAACGCCACCATGGGCAGCGGTGTGGACAAGCACGAGCTCGAGCATTCGGTCTACGACCTGCTCATCGGGGAGTGCGACTTGGCCCAGGCTATGCACTACTCCGAGCACGGAGGCTTCCAGTTGCTGCCGGCCAACCGTGACCTGACCGCCGCTGAGGTGGTGCTGCTGGAAATGCAGGTCAAGGAAAGCCGTCTGCGCAACGCCCTGGCGCCTATTCGCGATAACTACGACTACATCCTCATCGACTGCCCGCCGTCGCTGTCGATGCTCACGCTGAATGCTCTGGTCGCTTCCGATGGCGTGATTATCCCCATGCAGTGTGAGTACTACGCACTGGAAGGTCTCAGCGACCTTGTGGATAACATCAAGCGTATCGCCGCCCGGTTGAACCCGGAGTTGAAGATCGAGGGCCTGCTGCGGACCATGTACGATCCGCGTCTGAGCCTGAACAACGATGTTTCGGCACAGTTGAAGGAGCACTTTGGCCCTCAGCTGTACGACACGGTCATTCCGCGCAACATTCGCTTGGCCGAGGCCCCCAGCTTCGGCATGCCAGCCCTTGCTTACGACAAGCAATCGCGGGGCGCGCTGGCGTACCTGGCCCTGGCTGGGGAACTGGTACGCCGTCAACGCCGTCCATCACGCACTGCACAAACAACTTAA	MAKVFAIANQKGGVGKTTTCINLAASLAATKRRVLLIDLDPQGNATMGSGVDKHELEHSVYDLLIGECDLAQAMHYSEHGGFQLLPANRDLTAAEVVLLEMQVKESRLRNALAPIRDNYDYILIDCPPSLSMLTLNALVASDGVIIPMQCEYYALEGLSDLVDNIKRIAARLNPELKIEGLLRTMYDPRLSLNNDVSAQLKEHFGPQLYDTVIPRNIRLAEAPSFGMPALAYDKQSRGALAYLALAGELVRRQRRPSRTAQTT
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0003	CDS	1839	2489	-	gidB	glucose-inhibited division protein B		NP_742173	26986748	1043471			probable SAM-dependent methyltransferase								Unknown[Class 3]	biological_process|GO:0031167|rRNA methylation|IEA ; biological_process|GO:0046118|7-methylguanosine biosynthetic process|IEA ; cellular_component|GO:0005575|cellular_component|IEA ; molecular_function|GO:0008168|methyltransferase activity|IEA	TIGR00138|gidB|16S rRNA methyltransferase GidB|equivalog|4.2e-69|2.1.-.-|Protein synthesis|tRNA and rRNA base modification	PF05175|MTS, Methyltransferase small domain|59|148|4e-05	COG0357|GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane]. ; COG0357|GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane].	TTGAGTTCCCTGGTCACCCCTCAACACGCTGAAGAGTTGTCCACAGGTGCGCGCCAGCTTGGTGTCGAGCTGACTGCCGAGCAGCACGAGAAGCTGCTTGGCTACCTGGCTCTGTTGATCAAATGGAACAAAGCCTACAACCTGACTGCTGTGCGCGACCCGGACGAGATGGTTTCGCGTCACCTGCTCGACAGCCTTAGCGTCATGTCTTTTATCCACAACGATCGTGATAACTGGCTGGATGTTGGCAGCGGCGGTGGCATGCCCGGCATCCCGCTGGCTATCCTGCATCCACACAAGCGCGTCACCGTGCTGGACGCCAATGGCAAGAAGACCCGTTTCCTGACTCAGGTGAAAATGGAACTCAAGCTGGACAACCTCACGGTTATCCACAGCCGGGTCGAGGCCTTCCAGCCGGCACAACCGTTCGACGGAATCATCTCCCGCGCCTTCAGCAGCATGGAGAACTTCACCAACTGGACCCGCCACTTGGGCGACACCGGGACGCAATGGCTTGCAATGAAGGGGCTGCATCCTGCCGATGAACTGGTAGCATTGCCCGCAGACTTCACAGTGGAAAGCGAACAGGCCCTGACCGTTCCGGGTTGCCAGGGCCAGCGCCATCTGCTGATACTGCGCCGCAAGGCATGA	MSSLVTPQHAEELSTGARQLGVELTAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIHNDRDNWLDVGSGGGMPGIPLAILHPHKRVTVLDANGKKTRFLTQVKMELKLDNLTVIHSRVEAFQPAQPFDGIISRAFSSMENFTNWTRHLGDTGTQWLAMKGLHPADELVALPADFTVESEQALTVPGCQGQRHLLILRRKA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0004	CDS	2486	4381	-	gidA	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA		NP_742174	26986749	1043472			GidA								Unknown[Class 3]	biological_process|GO:0006400|tRNA modification|IEA ; molecular_function|GO:0016740|transferase activity|IEA	TIGR00136|gidA|tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA|equivalog|2.9e-302||Protein synthesis|tRNA and rRNA base modification	PF01134|GIDA, Glucose inhibited division protein A|9|400|1e-177	COG0445|GidA, NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning]. ; COG0445|GidA, NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning].	GTGGTGGATTTCCCTTCCCGTTTTGACGTGATCGTCATCGGCGGCGGCCATGCCGGTACCGAGGCTGCGCTTGCGTCTGCACGCATGGGTGTGAAAACCCTGCTGCTGACCCATAACGTGGAAACCCTCGGTCACATGAGCTGCAACCCCGCCATCGGCGGTATTGGCAAAAGCCATCTGGTCAAAGAGATCGATGCGCTCGGCGGCGCCATGGCGCTGGCCACCGACAAGAGCGGCATCCAGTTCCGCGTTCTGAACAACCGCAAGGGCCCGGCCGTACGTGCCACCCGTGCGCAAGCCGACCGCGCCATCTACAAGGCAGTGGTACGTGAAATCCTGGAAAACCAGCCAAACCTGTGGATATTCCAGCAGTCCTGCGACGACCTGATCGTCGAGCAGGACCAGGTCAAAGGCGTGGTGACCCAGATGGGCCTGCGTTTCTTTGCCGAATCTGTGGTGCTGACTACCGGTACCTTCCTCGGCGGCCTTATCCACATTGGTCTGCAAAACCATTCCGGTGGTCGCGCCGGTGATCCACCTTCGATTGCCCTGGCCCACCGCATGCGTGAACTGCCGTTGCGCGTCGGCCGCCTGAAAACCGGTACCCCGCCACGCATTGACGGCCGCTCGGTGGACTTCTCGGTAATGACCGAACAGCCAGGCGATACGCCGATCCCGGTGATGTCGTTCATGGGCAATGCCGAAATGCACCCGCGACAGGTGAGCTGCTGGATTACCCACACCAATGCGCGCACCCACGAGATCATTGCGTCGAACCTCGACCGTTCACCGATGTACTCGGGCGTGATCGAAGGTGTCGGTCCGCGCTACTGTCCGTCTATCGAAGACAAGATCCACCGCTTTGCCGACAAGGAAAGCCACCAGGTGTTCATCGAGCCGGAAGGCTTGAACACCCATGAGTTGTATCCCAACGGTATTTCCACTTCGCTGCCGTTCGACGTGCAGTTGGAGCTCGTGCGTTCCATCCGTGGCATGGAAAACGCCCACATCGTGCGCCCCGGCTACGCCATCGAATACGACTACTTCGATCCCCGCGACCTCAAGTACAGCCTCGAGACGAAAGTCATCGGCGGCCTGTTCTTCGCCGGGCAGATCAACGGCACCACCGGGTACGAAGAAGCCGGCGCCCAGGGCCTGCTGGCCGGGACTAACGCCGCACTTCGGGCGCAGGGCCGTGACAGCTGGTGCCCGCGCCGCGACGAGGCATACATCGGCGTACTGGTGGACGACCTGATTACCTTGGGTACTCAGGAGCCGTACCGCATGTTTACCTCGCGTGCCGAGTACCGGCTGATACTGCGCGAAGACAACGCCGACCTGCGCCTGACCGAAAAGGGCCGTGAACTGGGCCTGATCGATGACCAGCGCTGGGCCGCATTCTGCGCCAAGCGCGACGGTATCGAGCGTGAGGAACAGCGCCTGAAATCGACCTGGGTTCGGCCCAATACCGAGCAAGGCCAGGCCATTGTGGATAAATTCGGCACTCCGCTGAGCCACGAGTACAGCCTGCTCAACCTGCTGGCGCGCCCCGAAATCGACTACGCCGGCCTGATCGAAGCGACTGGCGGTGAAGCGATCGATCCACAGGTTGCCGAGCAGGTCGAGATCCGCACCAAGTACGCCGGCTACATCGACCGCCAGCAGGATGAAATTGCCCGACTGCGCGCCAGCGAAGACACACGCCTGCCTGTGGATATCGACTACACGACGATTTCCGGCCTGTCCAAGGAGATACAGGGCAAGCTGAGCCAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTATCCCGGGTGTGACCCCGGCGGCGATTTCCCTGTTGCTGATTCACTTGAAAAAACGCGGCGCTGGCCGCGAATTGGAGCAAAGCGCTTGA	MVDFPSRFDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDALGGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQQSCDDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAHRMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWITHTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTHELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLFFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWVRPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGGEAIDPQVAEQVEIRTKYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPQTLGQASRIPGVTPAAISLLLIHLKKRGAGRELEQSA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0005	CDS	5012	6382	-	trmE	tRNA modification GTPase TrmE		NP_742175	26986750	1043475			in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting								Cytoplasmic[Class 3]	biological_process|GO:0006400|tRNA modification|IEA ; molecular_function|GO:0003924|GTPase activity|IEA	TIGR00450|mnmE_trmE_thdF|tRNA modification GTPase TrmE|equivalog|1.6e-99||Protein synthesis|tRNA and rRNA base modification	PF00071|Ras, Ras family|219|344|7e-06	COG0486|ThdF, Predicted GTPase [General function prediction only]. ; COG0486|ThdF, Predicted GTPase [General function prediction only].	ATGAACACTGTGCGTGAAACCATCGCCGCCATCGCCACGGCCCAGGGCCGGGGCGGTGTGGGAATTGTCAGGTTGTCCGGCCCTCTGGCTGCCAAGGCCGGCCTGTTGATCACCGGCCGCACCCTGACCCCGCGGCATGCCCATTACGGTCCATTCCGCGACGATGAAGGGCTGGTGCTGGACGAAGGGATTGCTCTGTTCTTTCCAGGGCCTAATTCGTTCACTGGCGAGGACGTGCTTGAACTGCAGGGACACGGTGGCCCTGTGGTCTTGGACATGCTGCTGCAGCGCTGTGTACAAGTCGGCTGTCGTCTGGCCCGCCCGGGCGAGTTCAGCGAGCGCGCCTTCCTCAACGACAAGCTCGACCTGGCGCAGGCTGAAGCCATCGCCGACCTGATCGAGGCCAGTTCCAGCCAGGCAGCGCGCAACGCCCTGCGCTCGCTGCAAGGGGAATTCTCCAGGCGTGTGCACAGCCTCACCGAGGCGTTGATTGCCTTGCGTATTTACGTCGAGGCGGCGATCGATTTTCCTGAAGAAGAGATCGACTTCCTCGCCGATGGCCACGTGCTGTCGATGCTTGATGCCGTGCGCAGCGAGTTATCCACTGTGCAGCGCGAGGCCGGGCAGGGCGCCTTGCTGCGTGACGGCATGACGGTAGTCATTGCCGGCCGGCCGAATGCCGGTAAATCGAGCTTGCTGAACCAGCTGGCTGGTCGGGAAGCTGCCATCGTCACTGACATCGCCGGCACTACGCGGGATATCCTGCGCGAACATATCCACATCGACGGCATGCCGCTGCACGTTGTCGATACTGCCGGTTTGCGCGATACCGATGACCATGTGGAAAAGATCGGCGTGGAACGCGCCCTGAAGGCCATTGGCGAGGCAGACCGCGTTCTGCTGGTAGTCGACTCTACTGCGCCCGAGGCCAGCGACCCGTTCGCTTTGTGGCCTGAGTTTCTGGCTCAGCGGCCTGACCCGGCCAAGGTCACGCTGATTCGCAACAAGGCCGACCTGAGTGGTGAGCGGGTAGCGCTGGAACAGTGCGATGACGGCCATGTGACCATTACCCTGAGCGCCAAGGGCGACGACACAGGGCTGCAACTGCTCCGCGACCATCTGAAAGGCTGTATGGGTTATGAGCAGACTGCAGAGAGTGGCTTCAGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGACCTGCTTGGGCGGATTTTCTCCAGCTTCTGCATCGGCAAGTAA	MNTVRETIAAIATAQGRGGVGIVRLSGPLAAKAGLLITGRTLTPRHAHYGPFRDDEGLVLDEGIALFFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCVQVGCRLARPGEFSERAFLNDKLDLAQAEAIADLIEASSSQAARNALRSLQGEFSRRVHSLTEALIALRIYVEAAIDFPEEEIDFLADGHVLSMLDAVRSELSTVQREAGQGALLRDGMTVVIAGRPNAGKSSLLNQLAGREAAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDHVEKIGVERALKAIGEADRVLLVVDSTAPEASDPFALWPEFLAQRPDPAKVTLIRNKADLSGERVALEQCDDGHVTITLSAKGDDTGLQLLRDHLKGCMGYEQTAESGFSARRRHLDALRQASEHLEHGRAQLTLAGAGELLAEDLRQAQHALGEITGAFSSDDLLGRIFSSFCIGK
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0006	CDS	6471	8153	-	yidC	putative inner membrane protein translocase component YidC		NP_742176	26986751	1043481			functions to insert inner membrane proteins into the IM in Escherichia coli								Cytoplasmic Membrane[Class 3]	biological_process|GO:0051205|protein insertion into membrane|IEA ; molecular_function|GO:0003674|molecular_function|IEA	TIGR03593|yidC_nterm|membrane protein insertase, YidC/Oxa1 family, N-terminal domain|equivalog_domain|1.3e-140||No Data|No Data	PF02096|60KD_IMP, 60Kd inner membrane protein|371|552|2e-75	COG0706|YidC, Preprotein translocase subunit YidC [Intracellular trafficking and secretion]. ; COG0706|YidC, Preprotein translocase subunit YidC [Intracellular trafficking and secretion].	ATGGATATTAAACGCACGATCCTGATCGCCGCGCTGGCAGTCGTGTCCTACGTCATGGTCCTGAAGTGGAACGATGACTACGGCCAGGCTGCCCTGCCGACTCAGAATACTGCTGCCAGCACTGTTGCTCCGGGCTTGCCCGATGGCGTGCCGGCCGGTAACAACGGTGCCAGCGCCGATGTACCGAGCGCCAACGCCGAATCGAGCCCTGCCGAACTGGCACCGGTCGCACTCAGCAAGGACCTGATCCGAGTCAAGACCGACGTTCTGGAACTGGCTATCGATCCGGTCGGTGGTGACATCGTCCAGCTGAACCTGCCGAAGTACCCACGCCGTCAAGACCACCCGAACATTCCATTCCAGTTGTTCGACAACGGTGGTGAGCGTGTTTACCTGGCACAAAGCGGTCTGACCGGTACCGACGGCCCGGATGCCCGCGCCAGCGGCCGTCCCCTGTATGCCGCCGAACAGAAGAGCTACCAGCTGGCCGATGGCCAGGAACAACTGGTGGTAGACCTGAAGTTCAGTGACAACGGTGTCAACTACATCAAGCGTTTCAGCTTCAAGCGCGGTGAGTACGACCTGAATGTCAGCTACCTGATCGACAACCAGAGCGGCCAGGCCTGGAACGGCAACATGTTTGCCCAGCTCAAGCGTGATGCCAGCGGCGATCCGTCCTCCAGTACTGCCACCGGCACCGCGACCTACCTGGGTGCTGCCCTGTGGACAGCTTCTGAGCCTTACAAAAAGGTCTCGATGAAGGACATCGACAAAGGTAGTTTGAAAGAAAATGTGTCCGGCGGCTGGGTTGCCTGGCTGCAGCACTACTTCGTGACCGCCTGGATTCCGGCCAAGTCGGACAACAACGTTGTCCAGACCCGCAAGGATAGCCAGGGCAACTACATCATCGGCTACACCGGCCCGGTTATCAGCGTACCGGCTGGCGGCAAGGTCGAAACCAGTGCCCTGCTGTACGCCGGCCCGAAGATCCAGTCCAAGCTGAAAGAGTTGTCCCCAGGCCTGGAATTGACCGTCGACTACGGCTTCCTGTGGTTCATCGCCCAGCCGATCTTCTGGCTGCTGCAACATATCCACAGCCTGCTGGGTAACTGGGGCTGGTCGATCATCGTGCTGACCATGTTGATCAAAGGCCTGTTCTTCCCGCTGTCGGCTGCCAGCTACCGCTCCATGGCGCGTATGCGTGCCGTTGCACCTAAGCTCGCCGCACTCAAGGAACGCTTCGGTGACGATCGCCAGAAGATGTCCCAGGCGATGATGGAGCTTTACAAGAAAGAGAAGATCAACCCACTGGGCGGCTGCCTGCCGATCCTGGTCCAGATGCCGGTATTCCTGGCCCTGTACTGGGTATTGCTGGAAAGCGTGGAAATGCGCCAGGCCCCGTGGATCCTGTGGATTACCGACCTGTCGATCAAGGATCCGTTCTTCATCCTGCCGATCATCATGGGCGCCACCATGTTCATCCAGCAGCGCCTGAACCCGACTCCGCCGGATCCGATGCAGGCCAAGGTGATGAAAATGATGCCAATCATCTTCACCTTCTTCTTCCTGTGGTTCCCTGCCGGTCTGGTGCTGTACTGGGTTGTGAACAACTGCCTGTCGATTTCGCAGCAGTGGTACATCACTCGCCGTATCGAAGCAGCTACCAAAAAAGCTGCTGCTTGA	MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASADVPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPFQLFDNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNGVNYIKRFSFKRGEYDLNVSYLIDNQSGQAWNGNMFAQLKRDASGDPSSSTATGTATYLGAALWTASEPYKKVSMKDIDKGSLKENVSGGWVAWLQHYFVTAWIPAKSDNNVVQTRKDSQGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELSPGLELTVDYGFLWFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALKERFGDDRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWILWITDLSIKDPFFILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEAATKKAAA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0007	CDS	8156	8401	-		conserved hypothetical protein TIGR00278		NP_742177	26986752	1043483			similar to GB:L11566, SP:Q07020, PID:337493, GB:L11566, SP:Q07020, and PID:337493								Unknown[Class 3]		TIGR00278|TIGR00278|conserved hypothetical protein TIGR00278|hypoth_equivalog|9.7e-24||Hypothetical proteins|Conserved	PF01809|DUF37, Domain of unknown function DUF37|1|68|1e-24	COG0759|COG0759, Uncharacterized conserved protein [Function unknown]. ; COG0759|COG0759, Uncharacterized conserved protein [Function unknown].	ATGCGTAAACTGGCACTCGTTCCGATCCAGTTTTACCGTTATGCCATTAGTCCTCTGATGGCCAATCACTGTCGGTTTTTCCCCAGTTGCTCCTGTTACGCGTATGAAGCCATCGAAAACCATGGCATCTGGCGTGGTGGGTGGCTGGCCGTTCGTCGCCTGGGGCGTTGTCATCCGTGGAATGACGGCGGTTACGACCCCGTTCCACCCGCTCCTTCCTCCCGAACTTCTTCGATAGCCGAGTAA	MRKLALVPIQFYRYAISPLMANHCRFFPSCSCYAYEAIENHGIWRGGWLAVRRLGRCHPWNDGGYDPVPPAPSSRTSSIAE
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0008	CDS	8394	8798	-	rnpA	ribonuclease P		NP_742178	26986753	1043484			protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus						3.1.26.5		Unknown[Class 3]	biological_process|GO:0006396|RNA processing|IEA ; molecular_function|GO:0004526|ribonuclease P activity|IEA	TIGR00188|rnpA|ribonuclease P protein component|equivalog|2e-26|3.1.26.5|Transcription|RNA processing	PF00825|Ribonuclease_P, Ribonuclease P|6|113|5e-29	COG0594|RnpA, RNase P protein component [Translation, ribosomal structure and biogenesis]. ; COG0594|RnpA, RNase P protein component [Translation, ribosomal structure and biogenesis].	GTGGTGAGTCAGGACTTCAGTCGGGAAAAGCGACTGCTTACACCCCGGCATTTCAAAGCGGTCTTCGACTCCCCAACCGGCAAGGTTCCAGGGAAAAACCTGCTGATCCTTGCTCGCGAGAACGGCCTCGATCACCCACGCCTTGGCTTGGTAATCGGCAAGAAGAGTGTCAAGCTCGCCGTTCAACGCAACCGCCTCAAGCGCTTGATGCGCGATTCCTTTCGTCTGAACCAGCAATTGCTTGCCGGTCTGGACATCGTGATCGTCGCGCGCAAGGGATTGGGTGAGATAGAAAACCCGGAATTGCACCAACATTTTGGCAAGCTCTGGAAACGCCTGGCGCGCAGCCGGCCGACACCAGCAGTCACCGCCAATTCCGCAGGGGTAGACAGCCAAGATGCGTAA	MVSQDFSREKRLLTPRHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFRLNQQLLAGLDIVIVARKGLGEIENPELHQHFGKLWKRLARSRPTPAVTANSAGVDSQDA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0009	CDS	8812	8946	-	rpmH	50S ribosomal protein L34		NP_742179	26986754	1043485			in Escherichia coli transcription of this gene is enhanced by polyamines								Unknown[Class 3]	biological_process|GO:0006412|translation|IEA ; cellular_component|GO:0000315|organellar large ribosomal subunit|IEA ; cellular_component|GO:0022625|cytosolic large ribosomal subunit|IEA ; molecular_function|GO:0003735|structural constituent of ribosome|IEA	TIGR01030|rpmH_bact|ribosomal protein L34|equivalog|7.4e-25||Protein synthesis|Ribosomal proteins: synthesis and modification			ATGAAACGTACTTTCCAACCAAGCACCATCAAGCGCGCCCGCACCCACGGTTTCCGTGCCCGTATGGCTACCAAGAACGGCCGTGCTGTTCTGTCGCGTCGTCGTGCCAAAGGCCGTAAGCGTCTGGCCATTTGA	MKRTFQPSTIKRARTHGFRARMATKNGRAVLSRRRAKGRKRLAI
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0010	CDS	9542	11062	+	dnaA	chromosomal replication initiation protein		NP_742180	26986755	1043486			binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication								Cytoplasmic[Class 3]	biological_process|GO:0006270|DNA replication initiation|IEA ; biological_process|GO:0006275|regulation of DNA replication|IEA ; molecular_function|GO:0003677|DNA binding|IEA ; molecular_function|GO:0003688|DNA replication origin binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA	TIGR00362|DnaA|chromosomal replication initiator protein DnaA|equivalog|1.4e-280||DNA metabolism|DNA replication, recombination, and repair	PF08299|Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain|414|483|9e-28	COG0593|DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. ; COG0593|DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].	GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTCTGCGCGATGAACTGCCTGCCCAGCAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCGAAGGCGACGAGTTGCGCGTCTATGCGCCTAACCGTTTCGTTCTCGATTGGGTCAATGAAAAGTACCTGGGTCGCTTGCTCGAGCTGTTGGGTGAGAACGGTAGCGGCATTGCACCAGCCCTTTCCTTATTAATAGGTAGCCGTCGCAGCTCGGCCCCAAGGGCTGCGCCCAACGCGCCGGTCAGCGCTGCCGTTGCGGCTTCGCTGGCGCAGACTCAGGCACACAAGACGGCCCCGGCAGCAGCGGTTGAACCCGTTGCCGTGGCTGCAGCCGAGCCTGTACTGGTCGAGACGTCTTCGCGTGACAGCTTTGATGCCATGGCCGAGCCCGCTGCGGCGCCGCCCAGTGGTGGTGGCCGGGCTGAACAACGCACCGTGCAGGTTGAAGGTGCGCTCAAGCACACCAGTTACCTGAACCGGACCTTTACCTTTGACACCTTCGTCGAAGGTAAGTCGAACCAGCTCGCCCGCGCGGCTGCCTGGCAGGTTGCGGACAACCCTAAGCATGGCTACAACCCACTGTTCCTTTATGGTGGTGTGGGTTTGGGTAAAACCCACCTTATGCATGCTGTGGGTAACCATCTGCTGAAGAAAAATCCGAACGCCAAGGTGGTGTACCTGCATTCGGAGCGTTTCGTCGCGGACATGGTCAAAGCGCTGCAACTCAATGCCATCAACGAATTCAAGCGCTTCTACCGCTCGGTGGATGCTTTGCTGATCGACGATATCCAGTTCTTCGCTCGCAAAGAGCGCTCGCAAGAAGAGTTTTTCCACACCTTCAACGCCTTGCTCGAGGGTGGCCAGCAGGTAATCCTTACCTCTGACCGCTATCCCAAGGAAATCGAAGGCCTGGAAGAGCGTCTGAAGTCGCGCTTTGGTTGGGGCCTGACGGTGGCTGTCGAGCCACCAGAGCTAGAGACCCGCGTAGCGATCCTGATGAAGAAGGCCGACCAGGCCAAAGTCGAGCTCCCGCATGACGCAGCCTTTTTCATCGCTCAGCGCATCCGGTCCAACGTCCGTGAGCTGGAAGGTGCACTGAAGCGGGTTATCGCTCACTCGCACTTCATGGGGCGTGACATCACCATCGAGCTGATTCGTGAATCGCTCAAGGATCTGTTGGCGCTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGACCAACCACAGTCTGCCGGAAATCGGCGACATGTTCGGTGGTCGCGACCATACGACCGTGCTGCACGCCTGCCGCAAAATCAATGAACTGAAGGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGGACGCTGACGACCTGA	MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVEPVAVAAAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDTFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRKINELKESDADIREDYKNLLRTLTT
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0011	CDS	11103	12206	+	dnaN	DNA polymerase III subunit beta		NP_742181	26986756	1043487			binds the polymerase to DNA and acts as a sliding clamp						2.7.7.7		Cytoplasmic[Class 3]	biological_process|GO:0006260|DNA replication|IEA ; cellular_component|GO:0009360|DNA polymerase III complex|IEA ; molecular_function|GO:0003887|DNA-directed DNA polymerase activity|IEA	TIGR00663|dnan|DNA polymerase III, beta subunit|equivalog|3.4e-116|2.7.7.7|DNA metabolism|DNA replication, recombination, and repair	PF02768|DNA_pol3_beta_3, DNA polymerase III beta subunit, C-terminal domain|246|366|4e-37	COG0592|DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ; COG0592|DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair].	ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTCGTCGAGCGCCGTCAGACCTTGCCGGTCCTGTCCAACGTATTGCTGGTCGTACAAGGCCAGCAACTGTCGTTGACCGGTACCGACCTGGAAGTCGAGCTGGTAGGCCGCGTGCAACTGGAAGAGCCGGCCGAGCCTGGCGAGATCACTGTTCCTGCGCGCAAGCTGATGGACATCTGCAAAAGCCTGCCTAACGACGCCCTGATCGATATCAAGGTCGATGAGCAGAAATTGTTGGTAAAGGCCGGCCGCAGCCGCTTCACCCTGTCGACCCTGCCTGCCAATGACTTCCCGACTGTGGAAGAAGGCCCGGGTTCGCTGACCTGCAACCTGGAGCAGAGCAAGCTGCGCCGCCTGATCGAGCGAACCAGCTTCGCCATGGCCCAGCAGGATGTGCGCTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACCGCGGTATTCGCCTGCAGCTGGCAGCCGGTCAACTGAAGATCCAGGCTAACAACCCCGAGCAGGAAGAAGCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAA	MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRNTLRAVSTDGHRLALCSMSAPIEQEDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQEEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSYVVMPMRL
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0012	CDS	12222	13325	+	recF	recombination protein F		NP_742182	26986757	1043488			Required for DNA replication								Cytoplasmic[Class 3]	biological_process|GO:0006260|DNA replication|IEA ; biological_process|GO:0006281|DNA repair|IEA ; biological_process|GO:0006310|DNA recombination|IEA ; biological_process|GO:0009432|SOS response|IEA ; molecular_function|GO:0003697|single-stranded DNA binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA	TIGR00611|recf|DNA replication and repair protein RecF|subfamily|1.7e-139||DNA metabolism|DNA replication, recombination, and repair	PF02463|SMC_N, RecF/RecN/SMC N terminal domain|2|360|4e-75	COG1195|RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ; COG1195|RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair].	ATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTACGAACAGGCTGCCTGTACTGTGTTCGGCGAGGTTCAGCTGACGGAGGGTGGTACGAGTAACCTGGGTGTGTCCCGTGAGCGACAAGGGGAGTTTACTATCCGCATCGATGGGCAAAATGCGCGCAGCGCCGCGCAATTGGCTGAGTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCAGTTTCTGGACTGGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTGCGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGAAGCCCGTCTTCGAGCGAACCCTGAGCGAACTGGTCGAGCTGGACGGGTTGACCCTGAGCTACTACCGAGGCTGGGACAAGGACCGGGAACTGCAAGAAGTGCTCGCCTCCTCCCTCCTTCGCGATCAGCAGATGGGCCATACCCAAGCCGGTCCGCAGCGTGCTGATCTGCGTTTGCGGTTGGCTGGCAACAACGCAGCCGACATCCTGTCGCGTGGTCAGCAAAAGTTGGTGGTATGCGCATTGCGCATTGCCCAAGGCCACCTCGTTAGTCAGGCTCGCCGCGGTCACTGTATTTATCTCGTGGATGACTTGCCGTCCGAACTGGATGACCAGCATCGCCGCGCACTGTGCCGCTTGCTTGAAGAATTACGCTGCCAGGTGTTCATCACCTGTGTAGATCACGAATTACTGAGGGAAGGCTGGCAGACGGAAACGCCAGTTGCTTTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGAGTGA	MSLRRIMVTAVRNLHPVTLLPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPVIQYEQAACTVFGEVQLTEGGTSNLGVSRERQGEFTIRIDGQNARSAAQLAELLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDPASQAAWDRELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELQEVLASSLLRDQQMGHTQAGPQRADLRLRLAGNNAADILSRGQQKLVVCALRIAQGHLVSQARRGHCIYLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRITQTHDHRE
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0013	CDS	13330	15750	+	gyrB	DNA gyrase subunit B		NP_742183	26986758	1043489			negatively supercoils closed circular double-stranded DNA								Periplasmic[Class 3]	biological_process|GO:0006265|DNA topological change|IEA ; cellular_component|GO:0009330|DNA topoisomerase complex (ATP-hydrolyzing)|IEA ; molecular_function|GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity|IEA	TIGR01059|gyrB|DNA gyrase, B subunit|equivalog|0|5.99.1.3|DNA metabolism|DNA replication, recombination, and repair	PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|34|149|4e-13	COG0187|GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ; COG0187|GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair].	ATGAGCGAAAATCAAACGTACGACTCCTCCAGCATCAAGGTGCTGAAAGGTTTGGATGCCGTACGCAAGCGTCCCGGCATGTACATTGGCGACACCGATGATGGTAGTGGCCTGCACCACATGGTCTTCGAGGTGGTCGACAACTCGATCGACGAAGCCCTCGCCGGTCACTGCGATGACATTACCGTCATCATCCACCCGGACGAATCTATCAGTGTGCGCGACAACGGTCGCGGCATTCCGGTCGATGTGCATAAGGAAGAAGGCGTTTCCGCAGCCGAGGTCATCATGACTGTGCTGCACGCCGGCGGTAAGTTTGACGACAACTCCTACAAAGTATCCGGCGGTCTGCACGGTGTAGGTGTGTCGGTTGTGAACGCCCTGTCCGAGAAGCTGGTTTTGACTGTTCGCCGTAGCGGCAAGATCTGGGAACAGACTTACGTTCACGGTGTTCCACAAGCGCCCATGGCGGTTGTCGGTGACAGTGAAACCACGGGTACCCACATCCACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACGAAGGCGGTCTGCGTGCGTTCGTCGAGTACTTGAACACCAACAAGACGCCGGTCAACTCCCAGGTGTTCCACTTCAACGTTCAGCGTGACGATGGCGTGGGTGTTGAAGTCGCCCTGCAATGGAACGACAGCTTCAACGAAAACCTGCTGTGCTTTACCAACAATATTCCGCAGCGTGATGGCGGTACCCACCTGGTGGGTTTCCGTTCCTCGCTGACCCGTAGCCTTAACAGCTACATCGAGCAGGAAGGCCTGGCCAAGAAGAACAAGGTGGCAACCACTGGCGACGACGCCCGTGAAGGCCTGACCGCGATCATCTCGGTGAAGGTACCGGACCCGAAGTTCAGCTCGCAGACCAAGGACAAGCTGGTCTCCTCGGAGGTGAAAACCGCCGTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTACCCAGGCGATCTTGCCGCTGAAGGGTAAAATCCTCAACGTCGAGAAAGCGCGCTTCGACAAGATGATTTCGTCCCAGGAAGTGGGCACGCTGATCACTGCGCTGGGCTGTGGCATCGGCCGCGAAGAGTACAACATCGACAAACTGCGTTATCACAACATCATCATCATGACCGATGCTGACGTTGACGGTTCGCACATCCGTACGCTGCTGCTGACCTTCTTCTTCCGTCAGCTGCCGGAGCTGGTCGAGCGTGGCTACATCTATATTGCCCAGCCGCCGCTGTACAAGGTGAAACGAGGCAAGCAGGAGCAGTACATCAAGGACGATGAGGCCATGGAAGAGTACATGACCCAGTCGGCTCTGGAAGATGCCAGCCTGCACCTGGACGAATCGGCGCCAGCAGTTTCCGGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGCCTGTCGCGCTTGTACCCGGAAGAGCTGACCGAGCACTTCGTCTACCTGCCTGAGGTGACCCTGGAGCAGTTGGGTGACCACGCAGTGATGCAGGCCTGGCTGGCCCAGTTCCAGGCGCGTCTGAACTCCAGCCAGAAGTCTGGCCTGGCTTACAACGCCAGCCTGCGTGAAGACAAAGAGCGCAACGTATGGCTGCCTGAAGTGGAAATTACCTCTCACGGTCTGGCCAGCTACATCACCTTCAACCGCGATTTCTTCGGCAGCAATGACTACCGTACCGTAGTCAACATTGGTGCCAAGCTTTCGAGCCTGTTGGGTGAAGGTGCGTACGTGCAGCGCGGTGAACGCCGCAAGGCAATCGTCGAGTTCAAAGAGGGCCTGGATTGGCTGATGAACGAGACCACCAAGCGCCATACGATTCAGCGATACAAAGGGCTGGGTGAGATGAACCCGGATCAACTGTGGGAAACCACCATGGACCCGACCGTTCGCCGTATGCTCAAGGTCACGATCGAAGATGCTATCGCCGCTGACCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAGCCGCGTCGTGACTTCATCGAAAGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGA	MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKRGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLSRLYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKERNVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIVEFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALSVSNLDF
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0014	CDS	17133	19166	+		transposase, putative		NP_742184	26986759	1043490			similar to GP:11071900								Cytoplasmic[Class 3]			PF00665|rve, Integrase core domain|278|480|2e-13		TTGGGGTGGTGGGCATTGACCTTGATAGGTCAATTGACACTGACTCCCCGGTCTTCCTGCAAGGGGGGCACCGTCATGCAAACCTTTTCCCTTAGGGTGAAATTGGTCGTCATCGTTCGTGGCGTACTGATGGTGCTTGAGAAGAGGCTTATTGACCGGAAGCTGCTCTTTTTCGATGAGCTTGGTGAGCCCACGAAGCTATCCGAGAAGGAGTTCTATGAGGCCTACGAGAAGCGCGAGATCGAGATCTCCGCTGATCAGCCATACCTTGGGAAGGTTCCGTATGTGCGGAACGTCCCTCCAGATATTTCATGCTTCCCCAAAAAACATGGAGATGAGGCATTGCGTCGACGCAAGTATCTGGACGACCTAACTAAGCGCGGTAAATACAAGCTACCGGGTGACGAAGACATGATCAAGAAACTTAGAGATATCGCCAAAAAGATTGGGGATGCGTGCGCACCCTCGGTTTCCACTATTCGACGTTGGGCAGCCAAATACATTGGCCAGAACGTAGTAAAGCTTATCCCTCAGCATGCCAAAAAGGGTCGGGCTGCCGCGATACAGGGAGAGCTCGAAGTTATTCTTGAAGGGGTGATTAATAAAACCTACCTGCAGGATACGATTCCAGCGGTCAGCGTGGTCGTTTCAGAATTCGAAGATCAGATAAAAGAGAGGAACAAAAGTCGTTTGCCTTCGGATCAGCTCAAGATCCCAAGCGGAATGACTGTCCGAAGGTACATCGCCAAGCTGGATCCGTACCTTGTGGATAAGGAGAGGCTCGGAAAACACGCAGCAGACAAGAAGCACCGTGTTGCGGCGGGTGTCCTACGTGTCCATGAGATTTTGGAACGTTGGGAAATTGATCACACCTTGTTGGACGTCCAGCTTGTGGATGAAACCTCGGGGCTGTGCATTGGGCGCCCCTATCTGACGATCGTCCTCGACCGCTTCTCTCGAATGGTGATGGGATATTTGCTCCACCTGTCGGCGCCAAATACGGAAACCGTGCTTCGTGTGATCGAACGCTCAATCCGTCCAAAAGCCGAATTGCTGAAGCGCTTTCCGAAAGTGAGAAATGAATGGTGGGCACGTGGGCTGCCGGCTCGAATAGTCCCAGACAACGCAGCGGAATTTCACGCGGGCGATCTCATCATGGGATTCAACGAGTTGGGTATCGAGATCATGTATCCCGCTTCAAGGGCCCCTCAAAGGAAAGGTGCCGTCGAACGCTTTTTCAGCACACAGAACCTGGGGCTTATCCACAACCTCCCGGGTACCACCTTCTCGAATATCCAGCAGCGTGGCGATTACGACTCGGAGAAGAATGCATGTTTCACGCTCCCTCAATTGGAGGCGGTGGTAGTGAAATGGATCGTCGATGGTTACCACCAGACTCCTCATCGGGGGCTGGACAACAGAACACCGGCTCAAGTCTGGGGGACTAGCGAGGCGAACCATGTCATCAGCCTTCCCGTCGACCTGGACTCGTTGGAGTGCATTCTGGCCAAGCGGGCCTCGGTGAAGGTTCACCATTACGGCATCGAGGTTGCCAAAGTGGGCTACCACTCTACGGAACTTGCTGAGCTCCGTATGCGTTTGGCAGACGGAGAAAAGGTAAACGTCCGCTATCGAGACGAAGCCGGGCACGTTTGGGTTCACGACCGCTTCAGAAACTTGTTCTTCAAAGTGCCCGCCAAAGATGAGCGAATGGCCGGTAAGAGCAGGGAGGTGTGGAAGGCTGCCGAGAAAGCGCTGCGAGAAAAATATAATGAGCAGCCTAGCTTCGAGGCTACGCACAGGTGCTACCAGGAAATTATGGAAGATGCAGACGAGGCCCGCCGTTCGCAGACGCTCAGAAAACGACGCGCAGCTGCCATAGCGAAAATCGACAAGGAGGGTCGAGTGACCGAAAGCACGCCTCCACCCAAGGTACTCGCTGAAGTGGAATGGACCGGTGACTCTATTCCTAACATTCCGCCAGCAGCCTTCAAGGTCTCGGTTCGTCGCCCTGCTGGGAGTTCTAAGCCATGA	MGWWALTLIGQLTLTPRSSCKGGTVMQTFSLRVKLVVIVRGVLMVLEKRLIDRKLLFFDELGEPTKLSEKEFYEAYEKREIEISADQPYLGKVPYVRNVPPDISCFPKKHGDEALRRRKYLDDLTKRGKYKLPGDEDMIKKLRDIAKKIGDACAPSVSTIRRWAAKYIGQNVVKLIPQHAKKGRAAAIQGELEVILEGVINKTYLQDTIPAVSVVVSEFEDQIKERNKSRLPSDQLKIPSGMTVRRYIAKLDPYLVDKERLGKHAADKKHRVAAGVLRVHEILERWEIDHTLLDVQLVDETSGLCIGRPYLTIVLDRFSRMVMGYLLHLSAPNTETVLRVIERSIRPKAELLKRFPKVRNEWWARGLPARIVPDNAAEFHAGDLIMGFNELGIEIMYPASRAPQRKGAVERFFSTQNLGLIHNLPGTTFSNIQQRGDYDSEKNACFTLPQLEAVVVKWIVDGYHQTPHRGLDNRTPAQVWGTSEANHVISLPVDLDSLECILAKRASVKVHHYGIEVAKVGYHSTELAELRMRLADGEKVNVRYRDEAGHVWVHDRFRNLFFKVPAKDERMAGKSREVWKAAEKALREKYNEQPSFEATHRCYQEIMEDADEARRSQTLRKRRAAAIAKIDKEGRVTESTPPPKVLAEVEWTGDSIPNIPPAAFKVSVRRPAGSSKP
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0015	CDS	19163	20122	+		GTP-binding protein, putative		NP_742185	26986760	1043491											Cytoplasmic[Class 3]			PF01637|Arch_ATPase, Archaeal ATPase|52|216|1e-06	COG2842|COG2842, Uncharacterized ATPase, putative transposase [General function prediction only]. ; COG2842|COG2842, Uncharacterized ATPase, putative transposase [General function prediction only].	ATGAACGCCATCAATCTGTACGAATGCTACGAGCATGGTGAATACAGCTTTACGCTCCGCGATCGTTTTATTCACAGCCCTCAAGTCGAGCGAGCGTTGACGCGACTAGGCGATATCCACGGCGATAGTCGGCGTACCAGAGCAAGTAAAGGGTTGCTGATCCAAGGTCCAAGCGGAGTGGGCAAGAGCACATTGGTCAAGGAGTACATTCGGTCATTGGAGGAATTGGAGAGCCATGACCCACAGAAGCGGACAGTTCTGTTCGTCGAGATGCCTTCGTCTCCAACCAAAAAGAACCTGGCAGCAGCCATTTTGGCAGAGCTGAAGGATCCCTTCGCAGAGGCACGAGGACATTCGGCAGAGGTTAAATTTGCGCGAGTAGTCCTGCTGCTGAAGAACCTTGGCGTGGAGATGTTGGTCCTCGATGAGGCGCAGCACCTGGTCGATTATCGTCGTAATGGTGCGTATGAGGCAGCAGACTGGATCAAGAGTCTGATGAATGAAACCAGTATCGCGTTTGTTCTGATTGGGCTGAAGCGCACCGAAAATCTCCTGCTAGCAAACGAGCAACTGCGACGCAGGTTTTCGGCCACGGTGGCATACGATCGCTTCACCTTCTCCGCTAATACGTCTCTTCATTTCGTGATGTTGTTGCAGGCAATCGAGGGCGAACTGCCTGTTCAAACCATCAGTTTTGTAGAGCCAGCGATGATTAAACGCTTCTACCTGGCTTCCTATGGATTGATCGACTACCTCATCAAGATTGTGGACAGGGCTGTTTGGCTGGTTCAAGTCCAGGACCTTGTCGGGATTGAACTTCCTGTGCTGGCCCAGGCTTTTGAAGACGAGGTTTGGAGCTACGCCACCGAGGATCGAAACCCCTTCAGTGCGAGCTTCAATTTCCAGCCTCTGTTCGGGAAGCGGGAGCCGTTTGAGACGTTCGAAGAGAGCAGTACCTGA	MNAINLYECYEHGEYSFTLRDRFIHSPQVERALTRLGDIHGDSRRTRASKGLLIQGPSGVGKSTLVKEYIRSLEELESHDPQKRTVLFVEMPSSPTKKNLAAAILAELKDPFAEARGHSAEVKFARVVLLLKNLGVEMLVLDEAQHLVDYRRNGAYEAADWIKSLMNETSIAFVLIGLKRTENLLLANEQLRRRFSATVAYDRFTFSANTSLHFVMLLQAIEGELPVQTISFVEPAMIKRFYLASYGLIDYLIKIVDRAVWLVQVQDLVGIELPVLAQAFEDEVWSYATEDRNPFSASFNFQPLFGKREPFETFEESST
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0016	CDS	20198	22114	+		hypothetical protein		NP_742186	26986761	1043492											Unknown[Class 3]					ATGTTTGGTCTTTTAATCAACCCACGACCACACCAAGACGAAAGTCTTTTGGGGTACCTGCAGCGCCTGGCGAAAGCCAACGGATTACCCAGAAAGGAACTGCTCACCGCCTTTGCACGAGCCGACGAGACCGATGTTGCGGACTGGCTGCAGATGATGGAAGGACCACTGAGCTGGCCTGCGGTATCTGCTGAGTTTCGTGATCCAAGGCCCAAGGGGGTCAAGTTATGGACGACTCATCACGCTCGTTACTGTCCGATCTGTTTGGGCGAAGCCGGTTATTGGAGAGAAAGCTGGGGCTTGACCCTGGTTACGACGTGTTCTGTCCACGGCACTGAACTCCACGGGCGGTGCCCCAACTGTCTGAAGGAAACCGATCCAAGCGCAATGAGTGCGAATAGTTGCCAAGCGTGTGGCACCTCATTGAGTGGGACCAATTTTGAGATCGCGCCGGCGAGTGATACGGCCGCCTGGCTCACCTCTGGCTTTGAAGATAGGTTTTACGCCGACTCGTTGCCAGCTGACGCGGGATTGGCGGCCCTCACCTACGAACAGTTTCACGAGTTGTCATCGCGTCTCGCTGTCAGAAGTTTGCCTACGGAAAGAACCCAGCCGCTGAAGGTTGCTGATTCGGGTTCGCTAGAGATATCGCGGCTTATGGCAAACGCGGCGGGCGTGGTTCTCATGAACTGGCCTCTCGCATTCAGAGAACTGCTGAGTGGCCTCAAGGCAGTCCATTCCGATAACGAACATTGGACGCTCAGCAGATCGTTCGGCCCGATATACCACGACATCCACCGTGATCTGGATGACTCTTGTTTTGACTTTCTTCGTCGAGAGTTCGAATCATTTCTGCAGCATGCGTGGGAAGCACCGTTAGCGAAGCGAAATCGCAATTTGAGTGAGGAGACGATTGAGAGACATCGTTGGGTGTCGTTCGATTCTGCTGCTGAAGCTTGTGGTCTCGGGGTATCAGTCATAAAACGCCTTCATCAGGAGGGACAAATCGCCTATCGGGAGAAGGTCCATGAAGATCGAGTCTTTACGGTCGTGGACCTGGATCATTTGAAGGCAATCTCGCAGCATCTCCAGGGCGTGGCTGATATGAAAGAAACCTCGACTTTGCTAAGCCTCTGTCGCAATCGGGTTAGGCAGCTGCTAGCTGGTGGTACCCTCCAGTTCTTTGGTGGAGAACCGCGCCCAGGCGAAAGGTGGCTGATTGACTGCCGCTCGATCAACGAATTGATTGATGAGAAGCTGCCTACCAGCTCTGACCAGAGCCTGGTGTCGATCAACTACTTGGCCAAGCATTCTCTGCCCAAGGGGGGTGGGTTGGTCGAGTTGGTTCAGGCAATACGTGCAGGTGAACTTCGCGCTTACGGCCCAGCTGAGAATGGCTCGGTTGCGGTAGGGGCGTGGTTACTCAAGCCGCAAGATTTTGCAGCGTGGCAACAAGCCCGAGCTGAGAACAAGAGTCCGGTCTTTCCCGGCCTGTCGGTAGTCAAGGCTGCTGCGCTGTTAGGCGTCAAAGAACAATGCGCATACGCGTTCGTTCGACTGGGTCTGCTATGGAGCACTGCTGTCGAACGAGGCCGGCGTACGCAATTGATGGTTAAGCCTCAAGCCATCGACAGATTCAGGCGTGGCTATATCTTGGGACCGGAGATTGCGGTGTATTTGGGGAAGTCGACCAGGGAGGCGTTCAAGCACCTTTGGGAGGCCAGGTTTCGCCCCGTTGCGGGGCCATCCATTCCAAACGCGGCTTGCCGGCAGTACGTTTGGGTAAGAAGCAAAAAGCTGATCGATTACCTCGCAAGTGAAGCCGCCCAGATCGACGATCCTGAAGCCATCACGTTTTTATCCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAG	MFGLLINPRPHQDESLLGYLQRLAKANGLPRKELLTAFARADETDVADWLQMMEGPLSWPAVSAEFRDPRPKGVKLWTTHHARYCPICLGEAGYWRESWGLTLVTTCSVHGTELHGRCPNCLKETDPSAMSANSCQACGTSLSGTNFEIAPASDTAAWLTSGFEDRFYADSLPADAGLAALTYEQFHELSSRLAVRSLPTERTQPLKVADSGSLEISRLMANAAGVVLMNWPLAFRELLSGLKAVHSDNEHWTLSRSFGPIYHDIHRDLDDSCFDFLRREFESFLQHAWEAPLAKRNRNLSEETIERHRWVSFDSAAEACGLGVSVIKRLHQEGQIAYREKVHEDRVFTVVDLDHLKAISQHLQGVADMKETSTLLSLCRNRVRQLLAGGTLQFFGGEPRPGERWLIDCRSINELIDEKLPTSSDQSLVSINYLAKHSLPKGGGLVELVQAIRAGELRAYGPAENGSVAVGAWLLKPQDFAAWQQARAENKSPVFPGLSVVKAAALLGVKEQCAYAFVRLGLLWSTAVERGRRTQLMVKPQAIDRFRRGYILGPEIAVYLGKSTREAFKHLWEARFRPVAGPSIPNAACRQYVWVRSKKLIDYLASEAAQIDDPEAITFLSTPIAQPRDCRFRHVGSR
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0017	CDS	22171	22530	+		transcriptional regulator MvaT, P16 subunit, putative		NP_742187	26986762	1043493											Cytoplasmic[Class 3]					ATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAACAGCTCGCAGCCCAACTGGCGGAGCTGGAAGCGCTGAAAAATGACTCTGCCCTGAAGCAGGAAATGGAATTTGAAACGAAGCTGCGCAGTTTGCTCAACGAGTATGGCTACGGCCTGCGCCAAGTGGTGCTGATCCTCGATCCGCAAGCGGTGGCTTCCACTGATATGGCCCCAAAAACCTCTCGGAAACCACGCGAAGTAAAGGTCTACAAGAATCCACACAGCGGAGAGGTTGTTGAGACCAAGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGA	MSRLAEFRLLEQQLAAQLAELEALKNDSALKQEMEFETKLRSLLNEYGYGLRQVVLILDPQAVASTDMAPKTSRKPREVKVYKNPHSGEVVETKGGNQRTLKAWKNEYGAEVVESWLAN
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0018	CDS	23176	24018	+		hypothetical protein		NP_742188	26986763	1043494											Cytoplasmic[Class 3]					ATGTCAGAACGCGAAGGGGTCTTAGCAAGGGCGCCGCTTATCTATGCGTTGAGCGTAATCAGATTTGCCCCGATTCTTAAGCTGCCAAAGCTGATCCCAGACATTCAGCACACGATCCGTCAGAGCCTCCCGGGCTTCTTCCAGATGGTCAAGGGCGTGCCGCCTGGGGTGATGCACAGCGGAGAACCGAATTCTTGGGCGTTCCTTAATCGGGATGCTGACTACGCGTGCGTGCTGGCCATGGATCACATGATCCTGCAAAGCACAAATTATCTTCATTTTGATAACCACTTAGCGCTTTTCCGTGAGTGCATTGAGGCGCTGGTAGGGCAAGCAGGTGCATTGGATATCACCGCTATCGGGATGCGGTACGTCGATAAAATTGAACCAGCTGAAGGTGAGACCCTAGCCGACTACCTTCCGGAAGCCATGCTCCCACTTAAATGCGATGAGCTAGCGGCGCATGGGAAAGTCCCCAAGGAGCAGCTTGGAATCTCTACTACCACCTACCATCTAGATCCGGAGTATCTGCACATCAGATGCTGGCGGCAGACTGGTATGTGGATACCGGAAGATTTGGTCGAGCCGGCCATGGTTTTCGAAATTGCTAAGCAATCGAGGAATTCATCCAAGCATGGTGCTCCTCTGCAAGGTGCATTTGTGCCTGTTAGCGAAAATGGTGCTCTTCTCGATACGGATGCGCATTGGCCGCTGCAGTTAGCCGAACGACTGGGAACCGAGGAGATCTGCACGAGACTCGACGGTTTGCATAAGACTGCTAACTTTGCTTTTAGGACAGTCGCGAAAGATCATGCCTTTGAGGTTTGGGGGAAGGCGAAATGA	MSEREGVLARAPLIYALSVIRFAPILKLPKLIPDIQHTIRQSLPGFFQMVKGVPPGVMHSGEPNSWAFLNRDADYACVLAMDHMILQSTNYLHFDNHLALFRECIEALVGQAGALDITAIGMRYVDKIEPAEGETLADYLPEAMLPLKCDELAAHGKVPKEQLGISTTTYHLDPEYLHIRCWRQTGMWIPEDLVEPAMVFEIAKQSRNSSKHGAPLQGAFVPVSENGALLDTDAHWPLQLAERLGTEEICTRLDGLHKTANFAFRTVAKDHAFEVWGKAK
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0019	CDS	24000	24698	+		hypothetical protein		NP_742189	26986764	1043495											Unknown[Class 3]					TTGGGGGAAGGCGAAATGACTACAGCAATGAATGGGCAATGGATTGATCCTACCGGGGCTGCTGTAAGCAGATCTTCTACTTGGGAAAACCCTGAAATTGCTCCGCGTGTAGGTAGCACGACAGCAAACCCTGTATTGGCGATTGCTTTCACAGCGATGCTGGCCGTTTCGGTAGTAGTCGCTCCTGGGACTGCCTCCCTGCCCTATCCACAACTTATCGGCTCAGCAGGCATGAGCTTTCATGGCGTGCATGCTGGTGCCTGGACCGAGGTGGACACCAGCCAGGATGCCAATGTTACCGAAGACGTAGCGCCGGCCTTAATCGAGGAGCTTAGGAGCGACTTCAAGTTGTCAGATAGCTCCATCGCGCAGATCTTCAACGTGTCTCGTCAGACCGTGTACAATTGGCGGACTGGAAAAACCGCCACTGGTTTTCCCGAGAGGCTTGCGGCTTTAACTGAGGCGTTGCGCCAAGTTAACGCCGAAGAAGCGCAGTATCTGCATCGGGTGCTTTTCTATCCAACCGCCGATGGCCGCCTGATTCAGGATGCGCTTTCGGATGAAGCGTGGAATCGAAATGGCGCTAAAGGTGTGTACGGAATGGTTGCGGAGTTGGCTGGCAAGGCGCAGCAGCTACGTGATAGGGACCTCAAAACCATCGCCAGGTTAGAAAAATCGGGCGGTTCGAATTTGGTTTGA	MGEGEMTTAMNGQWIDPTGAAVSRSSTWENPEIAPRVGSTTANPVLAIAFTAMLAVSVVVAPGTASLPYPQLIGSAGMSFHGVHAGAWTEVDTSQDANVTEDVAPALIEELRSDFKLSDSSIAQIFNVSRQTVYNWRTGKTATGFPERLAALTEALRQVNAEEAQYLHRVLFYPTADGRLIQDALSDEAWNRNGAKGVYGMVAELAGKAQQLRDRDLKTIARLEKSGGSNLV
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0020	CDS	24695	25570	+		hypothetical protein		NP_742190	26986765	1043496											Cytoplasmic[Class 3]					TTGATTATGGCTGATACACCTGAGCAAGAGATCGTAAGTGCCATTAGCGCTGCTGGTTGGCTGCAAGGAGATACCGTCTCAGGTGACGCCTTGATTGAACACATATCCGAGGAGGTCCTGAAAGGCCAATTCGAGGGGGTGGCTCCAGCTTATTGGATGTTGGCCTCCCATTCCTGCACGGTGCATGCACGCAACCTTTGTGATGCGCCGTGGATAGAGTGGATTGCCGTTAAGGTAAAGAAAAAGGCCTTTGATAAGCAGCTGCACGCCCTCAATCCACGTACGCTGCACCTGCAGCACGCGGAAAAGCAGGTTTTGGAGCTCAAGATTCACAAGCGTGTGTGGACCAAGAGAGCCGTGCTTCCGACGCTCCACCGAAATCCGGTAATCACGCTGAGCGAAGAAAACGGTCAGTATTTCTCATACTGGATGTCCCACCATTACAACCGTATTGCGATGCCGGACGAGTTGGTCAACCGCCTGAAGGCAGACCAAGGTGACGACGGCATGAAGGGCATCGCCGTGCTTGTCGACGATTTCCTCCATCAGAACAACCAATTTTTCGCTAGTGCTTGGGTTTCCTTCAACCCCAAGGGCGAGATTCGCGACCCGGCTGAGCCCTACGAGGTGGTGTTCCGGTTTTTGACCAAACGAGAGCACGCCAGGCGCGCAAATGAGCTGCACGACCAGCTGAATGAATTGCTCGGGGTGGCCAGAAATCTCAACGATGGGCTGTACTTCGGTGGAGCAGACGTCACGGTGCTCCAAGACTTTACCATGCTCGATGCGGAAGACTTCGTGCGGTACAACCTTCACGACTGGCTCAGTGTTGGGGATACCGATGAAGATGAAGAAGGTGCCGATGATGCTGACTGA	MIMADTPEQEIVSAISAAGWLQGDTVSGDALIEHISEEVLKGQFEGVAPAYWMLASHSCTVHARNLCDAPWIEWIAVKVKKKAFDKQLHALNPRTLHLQHAEKQVLELKIHKRVWTKRAVLPTLHRNPVITLSEENGQYFSYWMSHHYNRIAMPDELVNRLKADQGDDGMKGIAVLVDDFLHQNNQFFASAWVSFNPKGEIRDPAEPYEVVFRFLTKREHARRANELHDQLNELLGVARNLNDGLYFGGADVTVLQDFTMLDAEDFVRYNLHDWLSVGDTDEDEEGADDAD
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0021	CDS	25881	26804	+		hypothetical protein		NP_742191	26986766	1043497											Cytoplasmic[Class 3]					ATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGCCGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGCTGTATGAGCTACCGCCTAACGTGAAGAACCCATTCGGGAAACATGCTACTAAGAGCATTCGCGGCATCGCTCCATTTGATAGTGAGGCCCGTAACGATTGCCCGTACTTCCAGCCTCGCCAGCACAAGAAAACAGAACGAAAAACCAGGTTTGACGGCGTCCCACGGAAGATTCTCAAGCTATTGATCGAACAGTTCGATCGCGTGGTTTACATCCTGGAGAAAGAGACCCAACTGGTCCTTTCCGAGAACGCGTTGAGAGGCATGCTGCAGCGTTACAAGGGAGAGCGTGGCTACCTCTATACCGGCGCGACGCTTCGCAATGTGCCATGGATCTTTGCTTACATGTCGGACGCCACCCGCCTGTTTGGCCAGAAGGTCATTGGAAATGCTGAGCTGGTGAAAGCTATTGCCGCTGAGGTGCCAGGGGCGGAAATCAGCAGCACTGGTCGGCTGGAATCGAAGAAGGTGCCTGGTTCGAAGGCGGCATATTTTGATCTCAAAATGAGTTTCATCCGCCATCGAATCGTCAAAGACAGTGAAGCGTCCGGCTTGGTTGAAAGCATGGAGTTTGTAGTGTCACAGCCTCGCGGAGGTGAGCTTGAGCACATTCACAAGGAAGTCATCAAATTCGATTCGGCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGA	MDVYKVRIEDTESKIIDKEGFEAETFRRDPWYQPGSAGKLAQFAVCPACDNPVQLVGLYELPPNVKNPFGKHATKSIRGIAPFDSEARNDCPYFQPRQHKKTERKTRFDGVPRKILKLLIEQFDRVVYILEKETQLVLSENALRGMLQRYKGERGYLYTGATLRNVPWIFAYMSDATRLFGQKVIGNAELVKAIAAEVPGAEISSTGRLESKKVPGSKAAYFDLKMSFIRHRIVKDSEASGLVESMEFVVSQPRGGELEHIHKEVIKFDSAWFESLIRMPVDHPYRRMDRVKMAREELGDLLELTQA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0022	CDS	26989	27390	-		hypothetical protein		NP_742192	26986767	1043500											Unknown[Class 3]					GTGATTCTGCGATTTGACGCAGGCGCTCAACCTCTTCGGCAGATGAGCCAGAAGCCTGCGCCTCGTGGTATTGCTTCATCGCATCCACTGCGTCGGTATACATGGGGTGGTCGGGGAGAAGAGCTGGCATCTTTTTCGTCATGTAGCGGCAGGTCCTCACTGGATAGTCGACGGTGGTTTACCTGCTTTGAGGAGCTGAAAATCAATGACCGCCTGATAGAGCGAATCTGCCAATGGGTGAAGACGCTGTACCTCAAGGTCTGGCAATCCAGCAGCCTCCGCTTCGTGGGCCTGTCGGATAGCTTCAAGCGCTTGCCTCATCAGTGGCTCACCAGCCTCGACCATTCCAATGAATGTGCGCTTCACAACATTTTGCTCCATTCAGCTGAAGATGAATTATAG	MILRFDAGAQPLRQMSQKPAPRGIASSHPLRRYTWGGRGEELASFSSCSGRSSLDSRRWFTCFEELKINDRLIERICQWVKTLYLKVWQSSSLRFVGLSDSFKRLPHQWLTSLDHSNECALHNILLHSAEDEL
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0023	CDS	27599	27727	-		hypothetical protein		NP_742193	26986768	1043502											Unknown[Class 3]					ATGAGCATCAAGCCAGGCCCAAAGCGCACCAATGAAGATGGCACTCCGGACAAAAGGCAGCGAGTCACCCCTGAAAAGCAGAAGGACCATCCGGACCTGAAACCCCACAAGCACAAAAAGGGGGAGTAA	MSIKPGPKRTNEDGTPDKRQRVTPEKQKDHPDLKPHKHKKGE
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0024	CDS	27850	29547	-		hypothetical protein		NP_742194	26986769	1043503			identified by match to PFAM protein family HMM PF02418								Cytoplasmic Membrane[Class 3]			PF08019|DUF1705, Domain of unknown function (DUF1705)|73|228|5e-48	COG2194|COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]. ; COG2194|COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only].	ATGACACCTTCCAAATCCATTGTTCACACCCTGTTAAGCAAATGGATCTTTGCTATTCGCAATGCGCGGCAGAAAGGCATCAGTACTAATTTGCTAATCGGCCTGGTGACTTTTTGGTTACTGCTATTCGCGAACGCTGAGCTCTGGAACGTGCTCTGGAAGCTGGTATTCAAAACCGATGAAGTGAACTGGCAGCTAGCGGCTAGCCTCCCAGTCATAGTATTCGCATGGGTGTTTACCGTTCTGAGCTTGCTGTCATGGGGGCGGCTGGCCAAACCCATACTGTGCCTGGTACTGATCAGCGCGTCTTTTGCGAGTTACTTCATGAATGCCTACGGCATCGTGATCGATTACACAATGTTCACCAACGTTGTGGAGACCGACGTCGCTGAGGCAACCGAGCTGCTGAATTGGAAGCTCGGTCTTTGGGTCGCAATGGTTGGGGTGTTGCCCGTCTACCTGATTGCCCGGGTTCCCCTCCGGCGCAAGCCTTGGGCCAAAGCTTTGGTCAGCAGGTTCATTGCTCTGTCGCTCGCTCTGTTGACCTTATCTGGCATCGCGTTGAGTCAGTACCAGTCGTATGCCTCCTTGCTGCGCAACAATCGGGAGATCCGGCTGATTCTGGTACCTACCAACTTGTTTGCGGCTGGCCATGGGTACCTGAAGCGTCAGCTGGCCTCACCTAAAACGCTGACGGCCATTGGTACTGATGCGGTAGTTAATCGACAGGGTGCGGCTCGTAAACCCAGGCTGCTGGTACTGGCAGTAGGAGAGACCGCTCGCTCCGCCAACTTCTCCCTCAACGGCTACTCCCGTGAAACGAATCCGGAACTAGAAAAGCGAAATGTCATTAGCTTCACGAACGTGAGCTCCTGCGGTACCGCTACCGCGGTCTCGCTGCCATGCATGTTCCTGGACGTGGGTAAGGCCCAGTACAAAGATGGCTTGGCCAAGAGCCGAGAAGGGCTGCTCGACGTGCTTCAACGCGCTGGCATCAGTGTCATGTGGACTGACAACAACTCGGGGTGCAAAGGGGTCTGCGACAGGGTTCCCAACCACAAGGCTGCCTCTCACGCGGATTCCCAACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGCTGCTCACGGAGATGCAAGACTTCATCAAGCGCCAGGAAGGCGATGCTGTCCTGGTGCTCCACTACAAAGGCAGTCACGGCCCGGCCTACTACAAGCGCTACCCCTCGCAATTCAAGAAATTCGCACCGGTGTGCGAGACCAACGAGCTCGACAAATGTAAGCAGGAGGAGGTGGTCAATGCCTACGACAACTCAATCCTCTACACCGATTATGTGACTGCAAATCTCATCGATATCCTGGCGGCCAACACCAAGTTCGACACTGCGCTGATGTACGTTTCGGACCACGGCGAATCGCTGGGGGAGGGTGGGCTCTATCTACACGGGCTGCCTTACGCGATGGCTCCTGACGAGCAAACAAAGGTGCCGTTGGTACTTTGGATGTCTGACTCGCTCGCGAAGAGCGAAAAGGTCAACGTGGGTTGTTTGAAAGCTCAAACCACGTCACCGCTGAGCCACGACAACCTGTTCCACACCGTGCTCGGCATGATGAACGTCCAGACGTCTTCGTATCGCTCAGCGCTGGATTTCACTGCCCCTTGTAAGCCCTTTGTCGGAGGCTCTTATTCTGGCCTCTGA	MTPSKSIVHTLLSKWIFAIRNARQKGISTNLLIGLVTFWLLLFANAELWNVLWKLVFKTDEVNWQLAASLPVIVFAWVFTVLSLLSWGRLAKPILCLVLISASFASYFMNAYGIVIDYTMFTNVVETDVAEATELLNWKLGLWVAMVGVLPVYLIARVPLRRKPWAKALVSRFIALSLALLTLSGIALSQYQSYASLLRNNREIRLILVPTNLFAAGHGYLKRQLASPKTLTAIGTDAVVNRQGAARKPRLLVLAVGETARSANFSLNGYSRETNPELEKRNVISFTNVSSCGTATAVSLPCMFLDVGKAQYKDGLAKSREGLLDVLQRAGISVMWTDNNSGCKGVCDRVPNHKAASHADSQLCTSEECKDGVLLTEMQDFIKRQEGDAVLVLHYKGSHGPAYYKRYPSQFKKFAPVCETNELDKCKQEEVVNAYDNSILYTDYVTANLIDILAANTKFDTALMYVSDHGESLGEGGLYLHGLPYAMAPDEQTKVPLVLWMSDSLAKSEKVNVGCLKAQTTSPLSHDNLFHTVLGMMNVQTSSYRSALDFTAPCKPFVGGSYSGL
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0025	CDS	29990	30142	-		hypothetical protein		NP_742195	26986770	1043504											Unknown[Class 3]					ATGGCGATCATATTGCTCGGCCCCATGTCCCCCGCTGTGGTGCTTGCCTCCACCGTGGTTTCCACGGCCATGGTGCCCGCCCAGGATGTTTTTGAAAAAGCTCATGGTATTCGCCCCTCATTGATGGGTGACATATTAACGAGCAAAAGTTGA	MAIILLGPMSPAVVLASTVVSTAMVPAQDVFEKAHGIRPSLMGDILTSKS
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0026	CDS	30431	31336	+		cobalt/cadmium/zinc transporter, CDF family		NP_742196	26986771	1043505			similar to SP:P13512								Cytoplasmic Membrane[Class 3]	biological_process|GO:0006812|cation transport|IEA ; cellular_component|GO:0016020|membrane|IEA ; molecular_function|GO:0008324|cation transmembrane transporter activity|IEA ; molecular_function|GO:0015562|efflux transmembrane transporter activity|IEA	TIGR01297|CDF|cation diffusion facilitator family transporter|superfamily|9.8e-85||Transport and binding proteins|Cations and iron carrying compounds	PF01545|Cation_efflux, Cation efflux family|29|288|5e-58	COG1230|CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]. ; COG1230|CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	GTGGGTTCAAATCATGACCATGGCAGCGCTGCAGTACGCGAGGGGCATCAGAAGAAGCTAATCATGGCGCTCGGCTTGACTGGCAGCTTCATGATTGCAGAAGTGATCGGTGCGTGGATTACCGGCAGCCTGGCGCTGCTGTCGGACGCATCTCACATGTTCACAGATACTGCCGCCTTGGCGATCTCACTGATTGCACTTCAGATAGCCAAGCGGCCGGCGGATCAGAAAAGAACCTTCGGCTATGCGCGCCTGGAAATTCTGGCTTCGACGTTCAACGCCGTGCTGCTCTTCCTGGTGGCGATGTACATCTTGTATGAGGCCTACCAGCGCTTCTTCATGCCGGCGGAGATCGCTACCGGAGCGATGATGTGGATCGCAATCGCCGGCCTGATCATCAACCTAATTTCGATGCGCCTTCTGGCATCTGCGAGCAACGAAAGCCTCAACGTCAAAGGAGCCTACCTCGAAGTTTGGAGCGACATGCTCGGCTCGCTTGGCGTAATCATCGCGGCACTTATCATCCGCTTCACCGGCTGGACCTGGGTCGACACGATTGTCGCTGTGGCGATCGGCCTTTGGGTTCTGCCGCGGACGTGGCAGTTGCTTCGCGAAAGCCTGGGGATCCTCATGGAGGGTGTCCCGAGGGGGCTCGACGTTACGGCAATCGAGGCCACCATCCTCGGAGTAGATGGCGTGACGGACGTTCATGACTTGCACGTGTGGGCTGTCAGCAGTGGCAGTAACGTGATGACGTCGCACGTAGTGGTTCGGGATTCTGCAGATGGGGATGCTGTGTTGGCGGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGA	MGSNHDHGSAAVREGHQKKLIMALGLTGSFMIAEVIGAWITGSLALLSDASHMFTDTAALAISLIALQIAKRPADQKRTFGYARLEILASTFNAVLLFLVAMYILYEAYQRFFMPAEIATGAMMWIAIAGLIINLISMRLLASASNESLNVKGAYLEVWSDMLGSLGVIIAALIIRFTGWTWVDTIVAVAIGLWVLPRTWQLLRESLGILMEGVPRGLDVTAIEATILGVDGVTDVHDLHVWAVSSGSNVMTSHVVVRDSADGDAVLAAVVDAVSDAFEIHHCTIQIERAAFHESVPSPSH
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0027	CDS	31404	31844	+		hypothetical protein		NP_742197	26986772	1043506											Cytoplasmic Membrane[Class 3]					GTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTACCTACTCACTGCCGGTATAGTGATTCTCGTGTCAGAGCTGGCGAAACGCAGCGACAAGCTGGGCGGCTTGGTCGCCGCCCTACCCTTGGTCACGGTCGTGACGTTGGTCTGGCTCTATTTAGAGAACCAGAGCATGGAGAAGATCTCCAACCATGCTTGGTACACGTTCTGGTACGTGCTTCCGACCCTGCCGATGTTTATTGCTTTTCCATTGCTGCTACCTAAGCTCGGCTTTTGGCCGACACTGATCAGCAGCATCCTCATCACAATGGCCAGCTTCGGAGGCTTCGCCATACTGCTGCGCCGGTTCGGCATTGAGCTTCTATGA	MRDAVNGRSASRGLVNGFACPRQQPPEGSAMAWIITKYLLTAGIVILVSELAKRSDKLGGLVAALPLVTVVTLVWLYLENQSMEKISNHAWYTFWYVLPTLPMFIAFPLLLPKLGFWPTLISSILITMASFGGFAILLRRFGIELL
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0028	CDS	31877	32203	-		hypothetical protein		NP_742198	26986773	1043507			similar to GP:12484570								Unknown[Class 3]					ATGAACACTACTGTATCAGCGATCGCCGTGTTTATGCTCTTTACATCACTAACAGCCAATGCCCAAAGCGGTATGGAGATCAATAAACACATCGAGCGTACTGCTAGAGAGGCTACAGCGGATTATGCTCAACGCGTAAAAAAGCCCATGCCTCAACTAGAAGACTACGCCTATGGCATGGACCTGGACGTTGGTAAGTTGGTGTATGTATCACCCAATGTGCGGTACTGCGGTAATGTAAGAAGCATGATGACCTACGAAGACTCGAAAGGCGAACTGCACATGGTTCGCTACCTGGTGAAGGGCGAGTGTGTTAATAGCCGTTAA	MNTTVSAIAVFMLFTSLTANAQSGMEINKHIERTAREATADYAQRVKKPMPQLEDYAYGMDLDVGKLVYVSPNVRYCGNVRSMMTYEDSKGELHMVRYLVKGECVNSR
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0029	CDS	32893	33567	+	czrR-1	DNA-binding response regulator CzrR		NP_742199	26986774	1043508			identified by match to TIGR protein family HMM TIGR01387								Cytoplasmic[Class 3]		TIGR01387|cztR_silR_copR|heavy metal response regulator|subfamily|1.5e-145||No Data|No Data	PF00486|Trans_reg_C, Transcriptional regulatory protein, C terminal|145|220|2e-20	COG0745|OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. ; COG0745|OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	ATGCGCGTTCTAGTTGTGGAAGACGAAATTAAAACTGCCGAATATCTTCAGCAGGGCCTATCCGAAAGCGGGTATGTCGTAGATATCGTGCACAACGGTGTAGATGCTCTGCACTTGTTCAACACTAATGTCTATTCGTTGGTCCTCCTGGACGTGAACCTCCCGGGTATCGACGGCTGGGACCTGCTGGAAACCATCCGTAAGACCAGCCGGGTCCGCATCATCATGCTGACCGCCCGCGGACGCATCAATGACAAGCTCAAGGGCTTGGACGGCGGCGCGGATGACTACCTTGTGAAGCCATTCGAATTCCCTGAGCTGCTTGCTCGCATCCGTTCGCTGCAACGCCGTGGTGATGAGTTAGTCGAGAAGAGCTCGCTGAAAATTGCCGATCTGGAACTCGACTCCGTCCGCCATCGCGTCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGA	MRVLVVEDEIKTAEYLQQGLSESGYVVDIVHNGVDALHLFNTNVYSLVLLDVNLPGIDGWDLLETIRKTSRVRIIMLTARGRINDKLKGLDGGADDYLVKPFEFPELLARIRSLQRRGDELVEKSSLKIADLELDSVRHRVFRGGTRIDLTTKEFALLHLLMSRTGEALTRSQIISLVWDMNFDCDTNVIDVAIRRLRSKIDDPFETKLIHTLRGVGYVFEERA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0030	CDS	33564	34982	+		sensor histidine kinase		NP_742200	26986775	1043509			identified by match to TIGR protein family HMM TIGR01386								Cytoplasmic Membrane[Class 3]		TIGR01386|cztS_silS_copS|heavy metal sensor kinase|subfamily|4.6e-143||No Data|No Data	PF00672|HAMP, HAMP domain|168|237|3e-05	COG0642|BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]. ; COG0642|BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	ATGAGGCCATTCAGCCTGGCTGCAAAGCTGGGGTTAAAAGTTGGGTTGATGAGCGCAGCGTTGCTGCTTCTGTTCGCCACCTTTGGCTATCTGATGGTAGGCAAGGCTCTGGAAAGAAATGCCAGAGCAGACCTGGAAGTAAAGATGGCGGGGATGGCTCACAACCTGTCCACCATCCCGGACATCTCCGGCGTCAACGCGGATGCGCATCAGCTTGTCGATTTGGTCATGGGCCACAACAACCTGTATGTGAGCATATTCGATACCTCACAGAATCAGACTCCCCTGCTCTCGATTGGCTCGAAACAGGTCAATCTGGAGGTGCACAAGTTTCAGCCGGCGGCCCAGCCCAAAGAGCACGAATGGCGTGATACGCAGGACCGTCCTCTGCTGAGTGCTTCTCGAATCATGCGTTTGGGCGATGGAACAGAGGTCAGCGTCTATATGACCATGGACCAGTCATCCAGTGAGGCGCTGCTCGATGCGTTGCTGACCTGGGCCTTGATGATGTCCCCCGTCATCCTCGCACTGATCTTGGCCATTGGCTGGTGGACTGTGCGCAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCGGGAGGTTCTGGAGTCGTGCACAGAAGAGCTGGACCGCATGAGCCGCATGGTTTCCGACATGCTGTTCTTGGCCCAGGTCAGTCATCCAGCATCAATGGTGGAGTTCGAATCCGTCTCCTTGGTCGACGAGGTTCAGCGAGTGTGCGATCTCTTCAGCATTTCAGCAGAAGAAGGCGAGATTCAGCTGCAGATCTCCGGCAGTGATGACGTGGTGCGCGGGAATCGCCTGATGGTTCAACGTGCCGTCTCGAATCTGGTCTCGAACGCGATCCGTTACTGCCCTCGCGGCCGCACGGTCTACGTTAAGGTGCAGCATAGTGCGAGCGGTACGACGTTGAGTGTCGGCAACCCCGGCCGTGGTATTGCCAAGGAACACCACGCGCACTTGTTTGAGCGGTTCTACCGTGTGGACAAGAGCCGAGCACGGAGCGAAGGCGGTACCGGTCTTGGCTTGGCCATTGTGCAGTCGATCATGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAA	MRPFSLAAKLGLKVGLMSAALLLLFATFGYLMVGKALERNARADLEVKMAGMAHNLSTIPDISGVNADAHQLVDLVMGHNNLYVSIFDTSQNQTPLLSIGSKQVNLEVHKFQPAAQPKEHEWRDTQDRPLLSASRIMRLGDGTEVSVYMTMDQSSSEALLDALLTWALMMSPVILALILAIGWWTVRRGLLPLTKFLKIASKISTESLDHRLPTDGMPAELKMLADGINIMLARLDDGVQQLSQFSDDLAHELRAPLSNLMGKAQVALTRERSLSEYREVLESCTEELDRMSRMVSDMLFLAQVSHPASMVEFESVSLVDEVQRVCDLFSISAEEGEIQLQISGSDDVVRGNRLMVQRAVSNLVSNAIRYCPRGRTVYVKVQHSASGTTLSVGNPGRGIAKEHHAHLFERFYRVDKSRARSEGGTGLGLAIVQSIMSLHQGSASVEVTEENFTWFHLHFPEAQQMQPAMTAA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0031	CDS	35040	35627	-		hypothetical protein		NP_742201	26986776	1043510											Unknown[Class 3]					ATGAATGACATAGAGCCCTGGGCAGTTGCTATCGGTGACTTTCGCCGCTGCACTGAAAAACTCACTGTCCAGCTCGATGAGCTGACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTCGAACGAACTGGTGGAGCAGGTGGACGCTGTCGGCCGGCAGATTCAGGAGGAGGTGCGAAAGGCGGAGAAGGCTTGGTCGAACGCGGAGGAGGTTGCCTTGCGCGCCGCTGCATCAGCGTATTCAGCTGCATGCCGCGGAGTCGACACCGCCATCCAGCCACTGATCTCGGAGCTTACAGCAGCGACAAAGGCGGCGGACGCCTCTATCCAGGAGCTCAAGCGGGCACCGGTGCTGGCCAAGCGTTATGTGATGGTGGTCGCCACGGCGTTCTTCATTCTGGCGCTGATCTGTGTCTACTCGACCATGCGCCTGATCGATGCCGCCGGCAGCGTAAGTGCTCAAGAGAAAGTGAATGCTCAGTACTTCTCACACCTGTGGAAAAACGCCAATCCTGACGAACAGAAGATTATTAAGTCGGTGATTCTGCGGTCGCCCATGGACCCTGTGGTCCTTCGGCACTGA	MNDIEPWAVAIGDFRRCTEKLTVQLDELTSQTRTSSAVLERSNELVEQVDAVGRQIQEEVRKAEKAWSNAEEVALRAAASAYSAACRGVDTAIQPLISELTAATKAADASIQELKRAPVLAKRYVMVVATAFFILALICVYSTMRLIDAAGSVSAQEKVNAQYFSHLWKNANPDEQKIIKSVILRSPMDPVVLRH
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0032	CDS	35894	36115	+		hypothetical protein		NP_742202	26986777	1043512											Unknown[Class 3]					ATGAAATTTGTCAAATCTATCGCTATTGGCAGCCTGCTGCTGGGTCTCATGGGTACCGCTTACGCTGAAGGCGGCTTCGAGCGAACGAAACAGTTCAACGAGAACTTCCGAACCGAACAGGCTCGCCTATGGAGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAA	MKFVKSIAIGSLLLGLMGTAYAEGGFERTKQFNENFRTEQARLWSDDSSDQNKQQVAQEQKKESKDGKEQADN
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0033	CDS	36198	37652	-		sugar transferase, putative		NP_742203	26986778	1043513			identified by match to PFAM protein family HMM PF02366								Cytoplasmic Membrane[Class 3]			PF02366|PMT, Dolichyl-phosphate-mannose-protein mannosyltransferase|17|237|6e-19	COG1807|ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]. ; COG1807|ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	ATGCTGAACCTGAAGAACGAGAGGACGCTGTGGTGGGTCCTGGGTTCGATTTTGCTATTGCGTTTGGTGGGGCTGGGCATCTACCCGCTGATGGACACATCTGAGGCCCGTTACGCTGAAATGGCTCGCAAGATGGTCGAGTTGAATGACTGGATCACGCCCATGTTCGACTACGGGGTACCGTTCTGGGGCAAGCCTCCGTTGTCCTTCTGGACCCAGGCCGCGAGCATGACGGTCTTCGGCGTTAACGAGTTCGCTGCGCGCTTCCCAGCGTGGCTACTCCACCTGGCAAGCTGTTTCATCATCATCAAACTCGGCACGCAGCAGATTTCTCGTAACGCCGGCATCTGGGCTGCCATTATTTTTTCCAGCACCACACTTGGCCTGGTCTCCAGCGGTGTTGTGCTGACTGACCCTGTTTTGTCGTTCTCGATTCTGCTGGCCAGCTACGGTTTCTGGCGTTGGATGAAGTGCGCCAGCAAGGCGGATGCCTACCTGATGTTCGCAGGTCTCGGGCTGGGCTTGCTTGCCAAAGGGCCGCTGACCCTGGTGCTTATGGGGGCGCCGGCATTCGCCTGGTTCGTTATCTACAAGGAATGGGGACGGGTACTGAGGCTTCCCTGGATTAGCGGCCTTGTACTCATGTTCGGTATATCCGTGCCATGGTATGTCGCGGCCGAGATGAAAACGCCCGGCTTCATGGAGTACTTCTTCGTTGGTGAGCACTGGAGCCGCTACGTCGTCAGTAACTGGGCAGGGGACCTCTATGGTAGTGCTCATGCCAAGCCGTACGGCAGCATCTGGATCCAGCTCGGATTGTCGCTACTGCCATGGGCCTTGTTTCTACCACTGTTGATCCGCAAGCGTGGATCGATGCAGCGCTTCAAAGCCTACCTCTGGCTGTGGGCCTTGGCGACACCGGTCTTCTTCACATTTGCAGGCAACATTCTGTGGACCTACCTGCTACCCGCGCTGCCAGCGTGGGCATTGCTGCTGTCTGCACGGGTCAGCGAAGTTGGCCCGAAGACCACCTGGGCTGCCGCTGCGAGCGCATTGGTGTTGCCAATCATCGGTGCGGGCATCATCTACGCCGGGGTACTAGAGGAGCGCCCTCAGAATCAGCGGGATGTGGTTCAAGCCTGGCTCAATGTGCAGTCTGCTCATTCCGCTCCCCTGATCTATCCTGGCCGCCGCTCATACTCGTCGGAGTTTTACAGCAGCGGGAAGTCCGAGAACATCAAGGATCCTGCCAAGTGGCCGCGGGATGGCTCGTTCTATCTGTCCAGGCGCTTGCGAGACAGCAAGGATGGTCTGCCCGCTGATCTAGCTTGCACATCGATCACCGAAGCGAACGCCAGCCAGCTCCTGCTGTGCCATTGGAAACGCCCCGCACAAGGTGCCGAGGGTCTGGCCGGAGAAAGCAATGCGGAAACGCCTCGCAAGAACGAAGGCTAA	MLNLKNERTLWWVLGSILLLRLVGLGIYPLMDTSEARYAEMARKMVELNDWITPMFDYGVPFWGKPPLSFWTQAASMTVFGVNEFAARFPAWLLHLASCFIIIKLGTQQISRNAGIWAAIIFSSTTLGLVSSGVVLTDPVLSFSILLASYGFWRWMKCASKADAYLMFAGLGLGLLAKGPLTLVLMGAPAFAWFVIYKEWGRVLRLPWISGLVLMFGISVPWYVAAEMKTPGFMEYFFVGEHWSRYVVSNWAGDLYGSAHAKPYGSIWIQLGLSLLPWALFLPLLIRKRGSMQRFKAYLWLWALATPVFFTFAGNILWTYLLPALPAWALLLSARVSEVGPKTTWAAAASALVLPIIGAGIIYAGVLEERPQNQRDVVQAWLNVQSAHSAPLIYPGRRSYSSEFYSSGKSENIKDPAKWPRDGSFYLSRRLRDSKDGLPADLACTSITEANASQLLLCHWKRPAQGAEGLAGESNAETPRKNEG
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0034	CDS	37646	38629	-		glycosyl transferase, group 2 family protein		NP_742204	26986779	1043514			identified by match to PFAM protein family HMM PF00535								Cytoplasmic Membrane[Class 3]			PF00535|Glycos_transf_2, Glycosyl transferase family 2|16|150|9e-20	COG0463|WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]. ; COG0463|WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane].	ATGCAGACATTACATCGCTTTCCCGAGCGCCCTGATCCCTTGTTAACCATCGTGGTCCCTTGCTTCCAGGAAGAGGAAACCATCCCCGAGTTCCACCAGCGAATCACCCGCGTGGTGAAGCGCTTACCCGTCTCCTGCGAAATCCTCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACATTCTTCGCCACTATCAGGATGGGTCATCTGTACGTTGCCTGTCCCTGAGTCGCAACTTCGGCAAAGAGGCTGCACTGAGCGCCGGGATAGACCATGCCCGTGGCAGTGCGCTGATCTTCATTGATGTCGACCTGCAGGATCCACCAGAGCTCATCGCGGCCATGGTGGACTACTGGCAACGCGGCTACGACGTGGTGAACATGCAGCGCAACCTGAGAATCGGTGATTCGTGGTTCAAGCGCATGAGTGCCCGGGCTTACTACTGGGTCATGCAGCGCCTGGTGGAGAAGGTGGACATGCCGGCCGATGTCAGCGATTTCCGATTGATTGGGCCTGCGCCGCTGGCAGCCCTGCGGGCCCTGGATGAACGCTCCAGGATTCTCAAAGGCATGATCGGCTGGGTAGGCTTTCGTACCATCGAACTGCCCTACAATCGCACTGTTCGCCATGCCGGGAGCACCAAATGGAATGCAGCTGGCCTGTTCAATCTGGCCATCGAGAGCATCGTCAGCTTCTCTCGCAAACCACTGCGCATTTTCAGCCTCATCAGTTTCGGTCTTTTCGTCTCCAGCATCTGCTACATGCTTGCGTCGCTTGTGGCAGGCAGTTTCGACATCCATCACCTGATCGTCGGAATGGCTTCATTCATGTGCGTCGGTGTCGCCATGGTGGGGGAGTACCTGGGCGTGACACTCGCGGAAGTGAAGCGCCGGCCTCTCTATTTCCTGAAGCACAGCAACAAGGCAGATCCCGTGTCACTCCACCCTTCGATGGCTTCGATCGAGGGTAAGAAATGCTGA	MQTLHRFPERPDPLLTIVVPCFQEEETIPEFHQRITRVVKRLPVSCEILYVDDGSNDRTADILRHYQDGSSVRCLSLSRNFGKEAALSAGIDHARGSALIFIDVDLQDPPELIAAMVDYWQRGYDVVNMQRNLRIGDSWFKRMSARAYYWVMQRLVEKVDMPADVSDFRLIGPAPLAALRALDERSRILKGMIGWVGFRTIELPYNRTVRHAGSTKWNAAGLFNLAIESIVSFSRKPLRIFSLISFGLFVSSICYMLASLVAGSFDIHHLIVGMASFMCVGVAMVGEYLGVTLAEVKRRPLYFLKHSNKADPVSLHPSMASIEGKKC
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0035	CDS	38595	39014	-		GtrA family protein		NP_742205	26986780	1043515			similar to SP:Q06206, GB:Z21940, and PID:287738								Cytoplasmic Membrane[Class 3]			PF04138|GtrA, GtrA-like protein|14|127|7e-08	COG2246|COG2246, Predicted membrane protein [Function unknown]. ; COG2246|COG2246, Predicted membrane protein [Function unknown].	ATGGAAAATCAAACCCCACCTCTTACTACCTTACTGATTCGTTATCTGGGGATCGGCTTCATAGCAACGGGAGTCCATTATGCGGTGTTCCTATTGCTGGTTACGACAGAATTCGTTACTCCGTTACTGGCCAGTATCTGTGGCGGCATGGTTGGCGCAATCGCGAGCTTCATTGGAAATAGGGCGCTCTGTTTTGTGGCAGATGGCTCTCGTAAGTTTCAGCCTGTCAGGTTTGCACTGGTCGCGTTAACCACAAACTTCGGCAATGGCGTGGGTATGTGGTTCCTCATCAAGTCGAATCTGTCACCGCTCATCTCCCAAGTCGTAGTGACCTTAAGCCTCACTGCACTTGGATTCATTGCACATCGTTTTTGGACATTCAATCATGCAGACATTACATCGCTTTCCCGAGCGCCCTGA	MENQTPPLTTLLIRYLGIGFIATGVHYAVFLLLVTTEFVTPLLASICGGMVGAIASFIGNRALCFVADGSRKFQPVRFALVALTTNFGNGVGMWFLIKSNLSPLISQVVVTLSLTALGFIAHRFWTFNHADITSLSRAP
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0036	CDS	39272	40240	+		transcriptional regulator, putative		NP_742206	26986781	1043516			identified by match to PFAM protein family HMM PF03466								Cytoplasmic[Class 3]			PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|27|85|2e-06	COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription].	ATGGTTACACAAAATGAAACATATACAAGCACCGTTGTTCCTTACAGCCCTGACATATTGGATGATTTGCCAATTGATGATCAGCTGGCCGTAGAGTTTTTCGCAACAGCACGTTGTGCCAGTTTCAAACAGGCTGCCCGAGGGCTCAATGTGCCAGTGGTAGGCCTGCGGAAACGCTTGGAGAAACTGGAAGAGCACATTGGTGCTCCCGTGTTTGTCTACAAACACAACAAGCTTGCCCTGACCCGCACAGGCGAGAGGGTCAGCCATTACCTGTGCCAGCTCTTCGGCCCAGACGGCCTTGGCAAGTCCGGTGAAAAGGAAGTCCCCAGGCTTACCATCGCGATCACAGAGCCAGTGCTGAACGACATCGTAAACCGCGATCTAGTCGCCTACGTGCGTGATCATGCCGAAATGCAGCTGGAAATCCATTCAGAATGCACAACGCAGATGCTTTCTGAGTGTGAAGTCGATGTGGGTATCGCTTTGGTGAGCCCAGATGATAAAGGCGCGCTTGATCGCCATCCTACGTATAGGTTTGAACGGCTTGGCCGGATTGGGCACGCCCTGTTCATTTCCAGCCGCTATTCAAGAAGCGTCACCCTTCCAGTGGAGAGCTTGGATTTGCACAACTTCATGCTCGTTGTCCCTTGGGATGAAGAGATCTTGGCGGGCTCACGAAAGTGGGCATCGATAATGGCTGAGCATCAGGGCGGTACCACTCGGGTCAAGAGCTACAACCTATCACGAGGCCTTGTCGTTGGCGGTGCGTGTATTGGAGTGCTGCCCGACTACAGCCGAAAACTGGAGAGAAATATCCTACCCGTGCCGGGTTTCCTGGACGACCTGGAGGAGAAAGATGTCTATCTTGTTATCAAAACGAAGCTTGTCCGCAATCCGCAGGTTTTGGAAATTCGAAGATTGATCAAGAAGAGCTTCTTTGATAAGAAGGACTGGCTTGTTCGGTAA	MVTQNETYTSTVVPYSPDILDDLPIDDQLAVEFFATARCASFKQAARGLNVPVVGLRKRLEKLEEHIGAPVFVYKHNKLALTRTGERVSHYLCQLFGPDGLGKSGEKEVPRLTIAITEPVLNDIVNRDLVAYVRDHAEMQLEIHSECTTQMLSECEVDVGIALVSPDDKGALDRHPTYRFERLGRIGHALFISSRYSRSVTLPVESLDLHNFMLVVPWDEEILAGSRKWASIMAEHQGGTTRVKSYNLSRGLVVGGACIGVLPDYSRKLERNILPVPGFLDDLEEKDVYLVIKTKLVRNPQVLEIRRLIKKSFFDKKDWLVR
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0037	CDS	40469	41758	+	oprP	porin P		NP_742207	26986782	1043517			similar to GB:X63597, GB:M22616, SP:P14410, PID:338090, and PID:36645								Outer Membrane[Class 3]			PF07396|Porin_O_P, Phosphate-selective porin O and P|51|429|8e-98	COG3746|OprP, Phosphate-selective porin [Inorganic ion transport and metabolism]. ; COG3746|OprP, Phosphate-selective porin [Inorganic ion transport and metabolism].	ATGCGGGAAAAGCTGTTGGCTGCCGCAATAATAGGCACATTTTCCTCGCAAGCATTCTCCGGAACAGTAACCACTGACGGAGCTGACATCGTTCTGAAGACCAAGGGCGGTCTTGAAGTATCGACTTCTGACAAGGAATTCAGTTTCAAACTGGGCGGCCGAGTTCAGGCCGACTACGGCCGTTTCGATGGTGTCTTCACCAAGAATGGCGATACCGCTGACGCAGGCTACTTCCGTCGCGCCTACCTTGAGCTCGGTGGCGTGCTGTACCGCGACTGGAAGTATCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGACGGCTACTTCGACGAAGCCAGCCTGACCTACACGGGTTTCAAGCCGGTGCAACTGCGCTTTGGCCGTTTCTACACCGACTTCGGTCTTGAGAAAGCCACCAGTTCGAAGTGGACCACCGCCATGGAGCGGAACCTCTCGTACGACCTGGCGGACTGGATCAACGACAACGCCGGCATGGGTGTTCAAGCCACCAGCACCATCGCTGACATGGCTTATGTTTCCGGTAGCGTTTTCAGCGAAACCAATAACAACTCGGATGGCGACAGCACCAAGCGCTACAACGTACGTGGCGTGTTCGCACCGCTGCACAGTGATGGCAACGTCCTGCACGTCGGTGCTCAGTACGCTTACCGCGACCTCAAAAACAGTGCGGTCGATACCCGGATTCGTTCGCGTCTGGGCGTCCGCGGTGTAGATACCAATGGCGGCGGCGATGCCGGCACCAACGGCAACCGCATGCTGTTTGGCGGTGCTGCTGCACAAGATGGCCTGTGGAAGGACGACTCGGTCTGGGGTCTCGAAGGTGCCTGGGCCACCGGCCCGTTCTCGGTTCAAGCGGAATACCTTCGCCGCAAGCTGAAAGCTGACCAGGCCAACAACGACATGAAGGCCTCCGGTTACTACGCCCAGATGGCTTACACCCTGACCGGCGAGCCGCGTATCTACAAGCTCGATGGTGCCAAGTTCGACACTATCAAACCAGAGAACAAGGAACTGGGGGCCTGGGAAGTCTTCTACCGCTTTGACGATATCAAGGTCGAAGACGGCAACCTGGTCACCGCGGCGGACCAATCGAACGAGCGCAAGGCCAAGAGCCACACGGTGGGTGTGAACTGGTACGTCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGA	MREKLLAAAIIGTFSSQAFSGTVTTDGADIVLKTKGGLEVSTSDKEFSFKLGGRVQADYGRFDGVFTKNGDTADAGYFRRAYLELGGVLYRDWKYQLNYDLSRNTGNDSDGYFDEASLTYTGFKPVQLRFGRFYTDFGLEKATSSKWTTAMERNLSYDLADWINDNAGMGVQATSTIADMAYVSGSVFSETNNNSDGDSTKRYNVRGVFAPLHSDGNVLHVGAQYAYRDLKNSAVDTRIRSRLGVRGVDTNGGGDAGTNGNRMLFGGAAAQDGLWKDDSVWGLEGAWATGPFSVQAEYLRRKLKADQANNDMKASGYYAQMAYTLTGEPRIYKLDGAKFDTIKPENKELGAWEVFYRFDDIKVEDGNLVTAADQSNERKAKSHTVGVNWYVNEAVKVSANYINVRTDNNENTVGDDSGNAIVTRLQYVF
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0038	CDS	41778	41912	+		hypothetical protein		NP_742208	26986783	1043518											Unknown[Class 3]					GTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGA	MRKPEALNVLPAFLFLEVIKHGAPSSYLLSLTDDRSCQSSANLM
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0039	CDS	42057	43082	+		hypothetical protein		NP_742209	26986784	1043519											Unknown[Class 3]					ATGCCTGCAAAAAAGCTGCTTCAACCTCTCGCTGCTCAGCTGCACGCCTCGTTCTCGGCTTCTGGCCGCCCGTACTCTCATCTGCACCTCCACCAGCTGTTCCACGCGGCCATCGGCTCCGTTGCACCGCAAGTTGCCATCCAAGACAAGCTGCCAATTCAGGTCTGTCGTGACAACGAGACACGGCAGTACAACCTCTACGCGGCGGTCGAGCGGGCGAAAACGTGCTTAGGATTGACCGATCTTCAAGCAGTCGGTGTGGCTGAAGAAGTCATTGAGGTGCTACGAACTGCGGGAATCGGCGTGAACCAGGTTCGCCTGCTCCTTGACCCCTCCTTCAGCTCGAAGACTCGCAAAAAGGCCTTCAAGGCTCTCTGCAAGAACCTGGATCTGAACGAGCTAGGCGATCGCTTCGTCCCCAAGACTGCCACGTTGGCCATCGCTGCTGGTATTGCGCCGCCTCCCAAAATGTCGTGGAAGGATCGCTTCGCCCTGGCTGCAAATTCCCCCATGCGGGGGCCAAGCGAGCTCATCAGCATGGTCAACCGGGATGAGTGTTATCTGTGGGTATTCCCACCGACTGACCATCATGCGACGGCTCCAGCGACGCATGACCGTTTCTTTGGTGAAAAGACCCACCCGAGCGCAGAAATGGGCATGGGGTTCAGCATCATCGATTCCGGCTGGACCCGCCCCAAGTACCCGCTATCCAGGCAGTCACAAGAGACCTTCATCCAGTATTCGCTTTCTGCGCCGATGTGGTCCTGGCGCGCACAAAGTGACACCTGGCGCCTGGGAAACATCCTGCGTTCAAGAATCCTTGACGGGGCTCCTTGGCATAACGAGCCTCTGAGTGACGTGCTTCCGAGCGGCCTTAAATCCCTGCCCCGGATCTATGGGTGCGAAACCTGCCGAACGCTGTTCATTGAGAATCACAGCGACTACCCGGATGTACCCACTCAGTGCCAATGCGGTGAGGCGAGCAGCACGGGTGACCAAAACGAGTCATCTGCTCTCAATAGCTGA	MPAKKLLQPLAAQLHASFSASGRPYSHLHLHQLFHAAIGSVAPQVAIQDKLPIQVCRDNETRQYNLYAAVERAKTCLGLTDLQAVGVAEEVIEVLRTAGIGVNQVRLLLDPSFSSKTRKKAFKALCKNLDLNELGDRFVPKTATLAIAAGIAPPPKMSWKDRFALAANSPMRGPSELISMVNRDECYLWVFPPTDHHATAPATHDRFFGEKTHPSAEMGMGFSIIDSGWTRPKYPLSRQSQETFIQYSLSAPMWSWRAQSDTWRLGNILRSRILDGAPWHNEPLSDVLPSGLKSLPRIYGCETCRTLFIENHSDYPDVPTQCQCGEASSTGDQNESSALNS
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0040	CDS	43210	43434	+		hypothetical protein		NP_742210	26986785	1043520											Unknown[Class 3]					ATGCAAAAGAGTAAAAACAAACAGGACACCCTGGCGGCGATCAATGCGCTTGTCGAGATTGCGTATGATCAGGGATTTGCGGACGGACACGGAGTCGGCAATCAAGTCGGTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGA	MQKSKNKQDTLAAINALVEIAYDQGFADGHGVGNQVGFVAGVMSLKAALACGLRHGSPECGKALESLKRIGIDE
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0041	CDS	43527	45524	-	cadA-1	cadmium translocating P-type ATPase		NP_742211	26986786	1043522			similar to GB:U13922, PID:549844, GB:J04456, GB:M57678, GB:D28452, GB:X15256, GB:X14829, GB:S44881, SP:P05163, SP:P09382, PID:184228, PID:23239, PID:307122, and PID:34343								Cytoplasmic Membrane[Class 3]	biological_process|GO:0030001|metal ion transport|IEA ; molecular_function|GO:0042625|ATPase activity, coupled to transmembrane movement of ions|IEA ; molecular_function|GO:0046873|metal ion transmembrane transporter activity|IEA	TIGR01525|ATPase-IB_hvy|heavy metal translocating P-type ATPase|subfamily|4.5e-214|3.6.3.-|No Data|No Data	PF00702|Hydrolase, haloacid dehalogenase-like hydrolase|349|579|4e-15	COG2217|ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]. ; COG2217|ZntA, Cation transport ATPase [Inorganic ion transport and metabolism].	ATGAAGAGTTTGCTTGAACGCCCTGATGACCAAGCCGGGCATGAAGGTCATAGCCATGAGCATGGCGGCATTTTTGGAATGAACACAGAGCTGATTTTCGCGCTGATCTGTGGTGCTCTCCTGGGTGCCGGAGCTCTCGCAGGAAAACTTGGCCTGATTGATCGTCTGCCTCTGATTCTGTACGTGTCGGCCTACGTGTTCGGTGGATGGTTCACCACTAAGGAAGCGGTTACCAACATCCGTCAGAAACGCTTCGAGATCGACTCGCTGATGCTTCTCGCCGCAGTCGGTGCCGCGAGCATCGGCGCCTGGGCGGAGGGGGCTCTGCTGCTGTTCCTGTTCAGTCTGGGGCATTCCCTTGAAAGCTACGCGATGGGGCGGGCCAAGAAAGCGATTGAGGCACTGTCCAAGCTCGCACCAGCCACCGCGATCGTACGCAGAGCAAATGGCACGGTGGAGATGCCCGTGGAGCTGCTGGTTCCCGGTGACGTTGTCATCGTGCGCCCCAATGACCGCCTGCCGGCCGATGGTTTTGTAGTCGTAGGCTCCTCAAGTATCAACCAGGCGCCAGTAACCGGTGAGAGCGTCCCCGTGGACAAGCAACCTGTTCCTGATGCCGAACTCGCACGCAGCAAGCCAGATGCAGTGGATGCAGCCTCGAAAGTCTTCGCCGGTACCATCAATGGCGAAACGCTCATCGAGGTTGAGGTAACCCGGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGATGGTCAGTGAAGCCGAAGTCAGGAAGTCACCGACCCAGCGATTCACGGACCGCTTCCAACGCATATTCGTCCCGTTGGTTTTACTGCTGGTAGTCGGGCTGCTATTTGCCGGCATTTTCCTTGACGAGCCGTTCCGTGACTCGTTCTACCGGGCGATGGCCGTACTGGTTGCAGCCAGCCCCTGCGCGCTCGCGATCGCTACACCAAGCGCCATTCTCTCTGGCATCGCCAGGGCAGCCCGAGGTGGCGTGCTGATCAAGGGCGGTGCGCCACTTGAAGAGCTTGGATCATTGAATGCCATGGCATTCGACAAGACCGGTACCCTGACCGAAGGGCGCCCACGTATCACCGATGTAATACCCATAGGCGGCACGCAGATCGAGGATCTGCTAAACGTCGCCATCGCTGTGGAGTCGATGAGCGACCATCCGCTGGCTGCGGCAATTGTGCGTGACGGTGAAGAGATGATTGGCACACGGCGCCGATTCCAAGCCAAGAACATGAGCAACATGATTGGCCGCGGCGTGCGTGCTGAGCTTGATGGGCAGTTCGTCTGGATTGGCAAGGTCGAGATGTTCGGTACCAATGGTATTCCCGCACTCAGCAAGGCAGCCCTGGAGGCTGCGGAGCGTCTACGTCAGTCAGGCCGTACCACCATGGTGGTACGGCGTGCTGACAAGGATCTGGGCGCTATCGGGCTATTGGACACACCCCGGGAGGGGGCCAAAGAGGCACTCCAGAAGCTTAGAGAGATGGGCATCGAACGCATGGTCATGATTTCTGGAGACCACAACCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGCCAAGGTGGCCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGCCAGTTCGAGCGTTGGTATCGCAATGGGGGCTGCTGGATCTGATGTTGCCCTGGAAACGGCTGATATCGCGCTTATGGCTGACGACATCAGGCAACTCCCATTTGCGGTGGGGCTGAGCCGTCACACGCGATCGATCATCCACCAGAATCTGTTCGTCAGCTTGGGGATTGTGGCCATCCTGGTTCCGTCCACCATCATGGGCTTGAGCATTGGTGCCGCTGTTGCGATCCATGAGGGCTCCACACTGTTGGTCGTCTTCAACGCCTTGCGCCTGTTGGCCTACCGCAGAAGCACCTGA	MKSLLERPDDQAGHEGHSHEHGGIFGMNTELIFALICGALLGAGALAGKLGLIDRLPLILYVSAYVFGGWFTTKEAVTNIRQKRFEIDSLMLLAAVGAASIGAWAEGALLLFLFSLGHSLESYAMGRAKKAIEALSKLAPATAIVRRANGTVEMPVELLVPGDVVIVRPNDRLPADGFVVVGSSSINQAPVTGESVPVDKQPVPDAELARSKPDAVDAASKVFAGTINGETLIEVEVTRRSTESTLARVIKMVSEAEVRKSPTQRFTDRFQRIFVPLVLLLVVGLLFAGIFLDEPFRDSFYRAMAVLVAASPCALAIATPSAILSGIARAARGGVLIKGGAPLEELGSLNAMAFDKTGTLTEGRPRITDVIPIGGTQIEDLLNVAIAVESMSDHPLAAAIVRDGEEMIGTRRRFQAKNMSNMIGRGVRAELDGQFVWIGKVEMFGTNGIPALSKAALEAAERLRQSGRTTMVVRRADKDLGAIGLLDTPREGAKEALQKLREMGIERMVMISGDHNRVAEAVAKQVGLDEAWGDLMPEDKVKAIKNLRLSAKVAMVGDGVNDAPAMASSSVGIAMGAAGSDVALETADIALMADDIRQLPFAVGLSRHTRSIIHQNLFVSLGIVAILVPSTIMGLSIGAAVAIHEGSTLLVVFNALRLLAYRRST
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0042	CDS	45727	45939	-		hypothetical protein		NP_742212	26986787	1043523			similar to GP:12484570								Unknown[Class 3]					GTGGCCAAGTACGCGGAGAAAAATGGCAAGCCAATGCCAGAGATTCAGGATTACAAATATGGCATGAAGATAGACGTTGCGAAATTCGTACGTCAGTCGCAGGACCCCCGTACCTGCCAGGTCTATCCACGGTTGATGACCTTCGAGGACTCCCAGGGCACGCTCAAGACTGTTCGTTACTCGATGTATTCGCAATGCATCAACAACAAGTAG	MAKYAEKNGKPMPEIQDYKYGMKIDVAKFVRQSQDPRTCQVYPRLMTFEDSQGTLKTVRYSMYSQCINNK
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0043	CDS	46213	49374	-		cobalt/zinc/cadmium efflux RND transporter, permease protein, CzcA family		NP_742213	26986788	1043524			identified by match to PFAM protein family HMM PF04295								Cytoplasmic Membrane[Class 3]	biological_process|GO:0030001|metal ion transport|IEA ; cellular_component|GO:0016021|integral to membrane|IEA ; molecular_function|GO:0051139|metal ion:hydrogen antiporter activity|IEA	TIGR00914|2A0601|heavy metal efflux pump, CzcA family|subfamily|0||Cellular processes | Transport and binding proteins|Detoxification | Cations and iron carrying compounds	PF00873|ACR_tran, AcrB/AcrD/AcrF family|5|1036|0.0	COG3696|COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]. ; COG3696|COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	ATGTTTGAACGTATCATCAGATTCGCCATCGAGCAGCGCATCGTAGTAATGATCGCCGTTCTGATCATGGCGGGTATCGGTATCTACAGCTATCAAAAGCTGCCCATCGATGCGGTACCCGATATCACCAACGTCCAGGTGCAGATCAACACTGCAGCGCCTGGTTACTCGCCCTTGGAAACCGAACAACGGATCACGTTTCCAGTTGAAACGGCCATGGCCGGTCTCCCGGGCCTTCAGCAGACCCGTTCCCTGTCTCGCTCTGGCCTGTCTCAGGTCACCGTGATCTTCAAGGATGGCACTGACATCTTCTTTGCCCGCCAGTTGATCAACGAGCGGCTGCAGGTTGCGAAGGAACAGCTGCCAGAAGGTGTAGAGGCCGTCATGGGTCCGGTATCTACCGGCCTCGGCGAGATCTTCCTGTGGACTGTTGAAGCCGAAGATGGCGCGGTCAAAGAGGACGGTACGCCGTACACCCCGACCGACCTGCGCGTGATCCAGGACTGGATCATCAAGCCTCAGCTGCGTAACGTCCCGGGTGTGGCCGAGATCAATACCATCGGCGGTTATGCCAAGCAGTTCCTGGTTGCGCCGGATCCAAAGCGCCTGGCTACCTACAAGCTGACACTCAATGACCTGGTCGCAGCGTTGGAAAGTAACAACGCCAACGTCGGTGCCGGCTACATCGAGCGTAATGGTGAACAGTTGCTCATCCGTGCACCGGGTCAGGTAGGCAATATCGAAGACATCGCCAACATCGTGATCACCAGTGTGGATGGTGCACCGATTCGCATCAGCAGCGTTGCTGACGTCAGCATCGGTAAAGAGCTCCGTACAGGTGCTGCTACTGAGAACGGCCGCGAAGTCGTGCTCGGTACCGTGTTCATGCTGATTGGTGAAAACAGCCGCACCGTATCTCAAGCTGTCGCCGCCAAATTGGCGGACATCAACCGCACCCTGCCAAAGGGCGTGGTGGCTGTGACTGTTTACGACCGTACCAACCTGGTTGAAAAAGCCATCGCGACGGTGAAGAAGAACCTGGTGGAAGGCGCGATCCTGGTTATCGCCATTCTGTTCCTGTTCCTCGGCAACATCCGTGCGGCTCTGATCACCGCGATGGTGATTCCGCTGTCCATGCTGTTCACCTTCACAGGCATGTTCAACAACAAGGTCAGTGCCAACTTAATGAGTTTGGGGGCACTCGACTTCGGCATCATCGTCGACGGTGCCGTGGTTATTGTAGAAAACGCGATCCGTCGACTGGCTCATGCGCAACATAAGCATGGCCGCATGCTCACCAAAACCGAACGCTTCCACGAGGTCTTTGCCGCGGCGCGAGAAGCTCGCCGGCCGCTGATCTTCGGTCAGCTGATCATCATGGTGGTGTACCTGCCGATCTTCGCCCTCACCGGCGTCGAAGGCAAAATGTTCCACCCGATGGCCTTCACCGTTGTGATGGCGCTGCTGGGTGCAATGGTCCTGTCCGTTACCTTTGTTCCTGCAGCTATTGCCATGTTCGTCACTGGCAAGGTGAAGGAAGAGGAAGGCGTGGTCATGCGCACAGCTCGACTGCGCTATGAACCGGTTCTGCAATGGGTGCTGGGACATCGGAACATCGCTTTCTCGGCCGCAGTAGCCTTGGTCGTGCTCAGTGGTTTGCTGGCAAGTCGTATGGGTAGCGAGTTCATCCCAAGCCTCAGTGAGGGTGACTTTGCGATGCAGGCCATGCGTGTGCCTGGAACGAGCCTCACTCAATCTGTCGAGATGCAGCAGCGTCTGGAGAAAGCGGTGATTGCGCAGGTGCCTGAAGTTGAGCGGATGTTCGCACGCTCGGGTACCGCAGAAATTGCATCTGACCCGATGCCGCCGAACGCCTCTGACGCCTACATCATGCTCAAGCCTCAGGATCAGTGGCCTAACCCGAAGAAGCCTCGTGATGAGCTGATTGCTGAAGTGCAGAAGGCCGCAGCGGGTGTTCCAGGAAGCAACTACGAGTTGTCGCAGCCAATCCAACTGCGTTTCAACGAGCTGATTTCGGGCGTGCGTAGTGACGTCGCTGTGAAAGTCTTCGGCGATGACATGGACGTGCTCAACAACACCGCCAACAAGATCGCGGCAGCGCTCAAAGCGGTCCCGGGCTCATCGGAAGTGAAAGTTGAGCAGACATCCGGCCTGCCGGTGCTGACCATCAACATTGACCGCGAAAAAGCAGCACGCTACGGCCTGAACATCGCGGATGTTCAGAACTCGATCGCTATCGCCGTGGGTGGCCGTCAGGCCGGCACGCTGTATGAGGGCGACCGTCGGTTCGACATGGTAGTACGCCTACCAGAGACCGTTCGCACCGACGTAGCGGGTATGTCCAGCTTGCTGATCCCGGTACCTGCCAATGCGGCACAGGGTGCCAATCAGATCGGCTTCATCCCGCTGTCCCAGGTCGCCAATCTGGACCTGCAACTGGGCCCGAACCAAATCAGCCGCGAGAACGGCAAACGTCTGGTTATCGTCAGCGCCAACGTTCGAGGCCGCGATCTGGGGTCCTTCGTTGAGGAGGCGACCGCATCGCTGGACAAGAAGGTGCAAATCCCTGCGGGCTACTGGACGACTTGGGGGGGCCAGTTCGAGCAGCTGCAGTCGGCTGCCAAACGCCTGCAGATCGTTGTTCCAGTCGCCTTGCTGCTGGTCATGACCTTGTTGTTCCTGATGTTCAACAACCTGAAGGACGGCATGCTGGTCTTCACCGGTATTCCATTCGCACTCACCGGTGGTGTTGTGGCGTTGTGGCTGCGGGACATCCCACTGTCGATCTCGGCAGGTGTCGGCTTCATTGCACTGTCCGGCGTTGCAGTACTGAACGGCCTGGTGATGATTGCCTTCATCCGCGGGCTAAGGGAGGAGGGACGAACGCTCAGACAGGCAGTCGATGAAGGTGCATTGACCCGTCTGCGACCTGTTCTGATGACAGCCTTGGTAGCGTCCCTGGGCTTCATCCCGATGGCTTTGGCCACCGGCACCGGTGCCGAAGTTCAGCGGCCATTGGCGACGGTGGTGATTGGCGGGATCCTGTCCTCCACCGCACTGACCTTGCTGGTACTGCCTGCCCTGTATCACTGGGCACACCGCAAGGATGAAGACGGCGACGAGGCCGAAGTGGTTAGCTAA	MFERIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLETEQRITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQLPEGVEAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVPGVAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIRAPGQVGNIEDIANIVITSVDGAPIRISSVADVSIGKELRTGAATENGREVVLGTVFMLIGENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAILFLFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLGALDFGIIVDGAVVIVENAIRRLAHAQHKHGRMLTKTERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEGKMFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVKEEEGVVMRTARLRYEPVLQWVLGHRNIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVEMQQRLEKAVIAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDELIAEVQKAAAGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAALKAVPGSSEVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYEGDRRFDMVVRLPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISRENGKRLVIVSANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFEQLQSAAKRLQIVVPVALLLVMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGVAVLNGLVMIAFIRGLREEGRTLRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLPALYHWAHRKDEDGDEAEVVS
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0044	CDS	49399	50649	-		cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family		NP_742214	26986789	1043525			identified by match to TIGR protein family HMM TIGR01730								Cytoplasmic Membrane[Class 3]		TIGR00999|8a0102|Membrane Fusion Protein cluster 2 protein|subfamily|5.2e-96||Transport and binding proteins|Other	PF00529|HlyD, HlyD family secretion protein|116|397|3e-08	COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. ; COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane].	ATGGATAACAAACGCAAGATCGCCCTCGCGGTAGCCGCTGTGGCAGCCCTCGGATTTGGCAGCCTTGCCTGGAACAACAGTTCCGGACAGCAGGCCGCCAGTACTGCCGAGCATGGCGCTAACGATGGCCATGGCGACGAAAAGAAAGCCGCATCTGCCGCCAAAGAGGAAGGTGATGAGGGCCATGGTGAAGAAGGCCACAGCGAAGAGGGCGGTGAAGAAGAGGGCAAGCTGACGCTCAGCGCTGAACAGATCAAGGCCGCTGGTGTTGCCCTGGAAGCTGCAGCGCCTCGTGACCTCGGTACCGTCGTGAGCTTCCCTGGCGAAATTCGCTTCGACGAAGATCGTACTGCCCACGTGGTTCCTCGTGTTCCTGGCGTTGTTGAGGCTGTCCAGGCCAACCTGGGCGAGACGGTCAAGAAAGGGCAAGTCCTCGCGGTAATCGCCAGCCAGCAGATCTCTGACCTGCGCAGCGAACAACAGGCCGCACAGCGTCGCGTCGAACTGGCGCGTGTGACCTTCGAACGTGAGAAGCAACTGTGGCAGGACAAGATCTCTGCAGAGCAAGACTACCTCCAAGCACGCCAAGCGCTGCAAGAAGCGGAGATCTCCTTGGCCAACGCCAAGCAGAAGGTCGGCGCAATCGGTGCCTCGGTTAACTCCGTTGGCGGTAATCGTTACGAGCTCCGCGCTCCCTTCGACGCCGTGGTAGTGGAGAAACACCTGACCGTCGGCGAAGTCGTCAGCGAGGCGACCAACGCCTTCATCCTTTCCGACCTGAATCAGGTCTGGGCGACCTTCGCAGTTCCGCCGACAGATCTGGGCAAGGTCACGACTGGCCGTGCAGTGAAAGTCTCTTCGCCTGACATGAACGTCGAGGTCGAAGGGAAGGTGGGTTATGTCGGCAGCCTGCTGGGCGAGCAAAACCGTGCAGCTACTGTCCGCGTCACCTTGACCAACCCCAACGGCGCCTGGCGTCCAGGCCTGTTCGTAAACATTGCGGTCACCTCCCAGACCGATCGAGTTGCCGTAGCGGTCCCTGAGCACGCTGTGCAGACCGTTGAAGACAAACCTTCGGTATTCGTACGCACCCCAGATGGCTTTGACACCCGCCCGGTAAAACTGGGTCGCCGCGACAATGGGTACGTGGAAATCATCGACGGTATTGAAGCCGGCGCCCAGGTAGCAACCAGTGGCAGCTTCACACTCAAGTCCGAGCTCGGCAAAGCTTCTGCCGAACACGGTCACTGA	MDNKRKIALAVAAVAALGFGSLAWNNSSGQQAASTAEHGANDGHGDEKKAASAAKEEGDEGHGEEGHSEEGGEEEGKLTLSAEQIKAAGVALEAAAPRDLGTVVSFPGEIRFDEDRTAHVVPRVPGVVEAVQANLGETVKKGQVLAVIASQQISDLRSEQQAAQRRVELARVTFEREKQLWQDKISAEQDYLQARQALQEAEISLANAKQKVGAIGASVNSVGGNRYELRAPFDAVVVEKHLTVGEVVSEATNAFILSDLNQVWATFAVPPTDLGKVTTGRAVKVSSPDMNVEVEGKVGYVGSLLGEQNRAATVRVTLTNPNGAWRPGLFVNIAVTSQTDRVAVAVPEHAVQTVEDKPSVFVRTPDGFDTRPVKLGRRDNGYVEIIDGIEAGAQVATSGSFTLKSELGKASAEHGH
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0045	CDS	50718	51989	-		cobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family		NP_742215	26986790	1043526			similar to SP:P13509								Outer Membrane[Class 3]	biological_process|GO:0006810|transport|IEA ; cellular_component|GO:0009279|cell outer membrane|IEA ; molecular_function|GO:0015288|porin activity|IEA	TIGR01844|type_I_sec_TolC|type I secretion outer membrane protein, TolC family|subfamily|4.1e-11||Protein fate | Transport and binding proteins|Protein and peptide secretion and trafficking | Porins	PF02321|OEP, Outer membrane efflux protein|41|215|2e-15	COG1538|TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]. ; COG1538|TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	GTGCCCCGGTATAACCGCAATGTCTTACCCAAGACCCCCGTCTCGCCCTGGAAGATCGCTGCACTCTGTGCAGTCATCTCTGGGTTGATGGCGCCTGCAGCCCTTGCCCAAAGCATCAGCTTGCCCCAGGCGCTTTCGACGGCCATGGATGCCAACCCAGACCTGGCCGCGGCCAGGCAAGAAATTGGGATCGCTGATGGTGCTCGCAAGCAGGCCGGGCTTATCCCCAACCCCACAATCTCGTATGACGTGGAAGACACCCGTCGTAACACCAGCCAGACGACTGTCTCTCTCAGCCAGACCCTTGAGCTGGGCGGTAAGCGGGGGGCTCGTGTTGACGTCGCCACATACGGGCAGACCGCCGCACAGCTTGAGTTAGACCGTCGCGTTAACGGCCTGCGTGCAGATGTCGTCCAAGCCTTTTACGCCGCGTTGCGGGCCCAGACAGGTCTCGACCTGGCCAAGCAATCTCTCGAACTGACTGAGCGCGGTCTTCGCATCGTCGATGGCCGTGTTCGCGCAGGTAAGTCGTCCCCAGTGGAGGCGACCCGCGCTCAAGTGCAACTGGCCGAAGCCCAGCTGCAAGTTCGACGTGCAGAAACGGAAAAAGCGACCGCTTACCAACAGCTCGCTCAAATTACCGGGAGCTCAGTCACCGTGTTTGATCGACTCGAATCGCCAACCCTCTCCCCGGGCTTGCCACCTCGCACTGAAGATCTGCTGGCTAAGCTCGACCAAACAGCAGAAATGCGTCAGGCCGTGGTGCAGATAGACAAGAGCGATGCCTCGCTCGGCTCAGAGAAAGCTCAGCGTATCCCGAACCTTACTGTCAGTGTAGGTAGCCAGTACGACCGCTCTGTGCGCGAGCGGGTCAACACTGTGGGCCTGTCTATGCCTTTGCCGCTGTTCGATCGTAACCAGGGCAACATTCTTTCCGCTTCTCGTCGTGCAGATCAGGCCCGGGACCAGCGCAATGCTGTTGAGCTGCGCCTGCGCACCGAAACCCAAACCGCGTTGAACCAATGGTCCACCGCCATGCAGGAGGTCGAGTCCTACGACAAGACCATTCTGCCTTCAGCCCAACAAGCCGTAGAGACCGCAACCCGCGGCTTCGAGATGGGCAAATTCGGTTTCATCGAAGTGCTGGATGCCCAGCGCACCTTGATCGTCGCTCGTGGCCAATACCTCGAATCGTTGGCAGCGGCGACCAATGCGCGTGCGCAGGTGGAAAGGGTTTATGGCGAAGTCGGCTCAACCGCCGGCACTCGCTGA	MPRYNRNVLPKTPVSPWKIAALCAVISGLMAPAALAQSISLPQALSTAMDANPDLAAARQEIGIADGARKQAGLIPNPTISYDVEDTRRNTSQTTVSLSQTLELGGKRGARVDVATYGQTAAQLELDRRVNGLRADVVQAFYAALRAQTGLDLAKQSLELTERGLRIVDGRVRAGKSSPVEATRAQVQLAEAQLQVRRAETEKATAYQQLAQITGSSVTVFDRLESPTLSPGLPPRTEDLLAKLDQTAEMRQAVVQIDKSDASLGSEKAQRIPNLTVSVGSQYDRSVRERVNTVGLSMPLPLFDRNQGNILSASRRADQARDQRNAVELRLRTETQTALNQWSTAMQEVESYDKTILPSAQQAVETATRGFEMGKFGFIEVLDAQRTLIVARGQYLESLAAATNARAQVERVYGEVGSTAGTR
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0046	CDS	52394	53737	+		porin, putative		NP_742216	26986791	1043527			similar to GP:2645844								Outer Membrane[Class 3]			PF03573|OprD, outer membrane porin, OprD family|11|446|1e-143		ATGAAAATCAAAGTACCACTGTATTTGGCGGCAGTTTCTGCGCTGTCTGGAAGCTATGCTATTTCGGCACAAGCTGAAGACAAGCCAGAAGGCTTCATTGAAGGCAGCAGCCTTACAGTGTTGAACCGTAACTTCTACTTCAACCGTGATAACCGCGACAGCACCGCCCCCACTTACAACAGTGGCAAGGGCAATACGAACGGCTACTCCGAAGCCTGGGCGCACGCGATCATCAGCAAATTCAACTCCGGGTTTACCCAAGGTACCGTTGGCTTTGGCGTTGATGCCTTTGCCATGATCGGCCTCAAGCTCGACACCGGTGATGGGCGCAACGGCGGCCGTAGCTCCTTCGACGTGCTGCCCGTTGATAACAAGGGTGAAGCTCGCGACGAATACACCAAGGTCGGCGGCGCAGCCAAAGTCCGCTTGTTCGATACCATCGTGAAAGTGGGTGATGTCTTCCCATCGACCCCGGTCGTCGCATCGGGTGACTCTCGCCTGCTGCCAGAGAGTTTCCGCGGTGTGACCGTTGAGAACACCAGCATCCAGGGCCTTACCCTCCAGGGTGGTCGTCTGCATGCGATGAGCCAGCCGGTCTCAAGCAACCTGAACGACAACTTCGTGACGTTCTACGGCGGCCCGGTCAACTCGCCATGGATCGGTTACGGTGGCGGTGACTACTCGATCAACGACAACTGGACTGTGAGCGTCTACGCCAGCCAGCTGAAAGACGTCTGGAATCAGTACTACGCCGGCACAAGCGTGGTTTACCCGCTGAGCGACGATCTGGCGCTGATCGGTGGCTTCAACTACTACAAAGCCGTAGATGAAGGTAAGAAGCGCCTGGGTGAATTCGACAACAACATCTGGAGTGCCAAGGTCGGTGTGCGTTACGGTGCCCACACCCTGGCCCTGTCGCATCAGCGCAACAACGGCGACGACGATTTCGACTACCTGCGTCAGTCGGACTCGATTTTCGTCGACAACTCCATCCAGTACAGCGACTTCAACTCGCCGAAAGAGCGTTCCTGGATGCTGCGCTATGACCTGAACTTCACCAGCTACGGCATTCCAGGCCTGACGTTCATGACGCGCTACGCCAGAGGCTCGGGTGCGGATTACTCGAACGCTAACCAGTTCTACATGCGCACCGACGACAACGGCAACCCGCTCGACAATCAGAAGCGTTGGGAGCGTGACGTCGAAGTCAAATACGTTGTCCAAACCGGTCCGGCAAAAGATCTGTCCTTCCGGTTGCGCCAGGCAACCACGCGTGCCACTGCTTTCGAATCGGATCTGGATGAAACTCGTGTAATCATCGAGTACCCGCTTTCGATTCTGTAA	MKIKVPLYLAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMSQPVSSNLNDNFVTFYGGPVNSPWIGYGGGDYSINDNWTVSVYASQLKDVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRATAFESDLDETRVIIEYPLSIL
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0047	CDS	54227	54901	+		DNA-binding heavy metal response regulator, putative		NP_742217	26986792	1043528			identified by match to TIGR protein family HMM TIGR01387								Cytoplasmic[Class 3]		TIGR01387|cztR_silR_copR|heavy metal response regulator|subfamily|8.9e-151||No Data|No Data	PF00072|Response_reg, Response regulator receiver domain|1|113|2e-21	COG0745|OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. ; COG0745|OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	ATGCGAATTCTGGTAATTGAGGATGAAGTAAAAACTGCGGAGTATGTGCGTCAAGGTCTGACGGAATGTGGCTATGTCGTAGATTGCGTCCACACCGGGTCAGATGGATTATTCTTGGCTAAGCAGCACGAATATGAGCTGATTATCCTGGATATAAATCTGCCAGAGATGGACGGTTGGCAGGTCCTTGAGTTGTTGCGTCGTAAAAACTGCCCTTCCCGTATCATGATGCTGACGGCGAGAAGCCGGCTGGCGGATAAGGTCCGGGGGCTGGAGAACGGAGCAGATGACTACCTGATCAAGCCATTTGAGTTCCCTGAGCTGCTGGCCCGGGTTCGCGCCTTGATGCGCAGGTCAGATCACCCTGCATCCGTAGAGGTCATTCGCGTCGCTGACCTGGAGCTTGATCAGAGCCGGCACAGGGCATTCAGGGACGGTCAGCGCATTGACCTGACCACGAAAGAATTCGCGTTACTGCATTACCTGATGCGTAATACCGGTGTGGTGCTGAGCCGCACCCAAATTATTTCGCAGGTTTGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGATTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAG	MRILVIEDEVKTAEYVRQGLTECGYVVDCVHTGSDGLFLAKQHEYELIILDINLPEMDGWQVLELLRRKNCPSRIMMLTARSRLADKVRGLENGADDYLIKPFEFPELLARVRALMRRSDHPASVEVIRVADLELDQSRHRAFRDGQRIDLTTKEFALLHYLMRNTGVVLSRTQIISQVWDMNFDCDTNVVEVSIRRLRAKIDDPFETKLIHTLRGVGYVLEKR
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0048	CDS	55019	55342	+		hypothetical protein		NP_742218	26986793	1043529											Unknown[Class 3]					ATGAGGTATAGCATTGATTATCAGCAGGTTTCGCAAGGACAATCCGATGCCAGCATTGATGCCTGTCCAGCTGACATTGTCTTCAACAGCGACCATGGCCTAGCTCTTATCCCGTGCGTTGGCGATGTTATCAACCTCCCCTCTACGGCGGTCAAAGAAGGGGTTTGCGGCATCGTTAGATCAAGGATTTTCAATTATCTCAGAGGTCCTGAAGAGCTGTACTGTCACGTCAATATTCTCGTTGAGGAGGCGGACATCAATTTCGAAAGTCTCATCTCGGAATACATGCGCAATCAGTCACGTGCTCGCTCGCCTTCTTCATAA	MRYSIDYQQVSQGQSDASIDACPADIVFNSDHGLALIPCVGDVINLPSTAVKEGVCGIVRSRIFNYLRGPEELYCHVNILVEEADINFESLISEYMRNQSRARSPSS
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0049	CDS	56161	57627	-		hypothetical protein		NP_742219	26986794	1043530											Cytoplasmic[Class 3]					ATGTCATCGCCGGCGGGCACGCTCCGAGGCATTGATGGAATGCATTTTGACGACTGCCGAGATCAGCGAATGAAAGAAATTGCTGCGCCGATGTTCGATCTAATCGCTTTGTCGCTTCCACGAGGGTTGGGGTTTGGGGACAGCCCGCCAGTAGGGGCATGGCTTAGTGAGGACGGAATTTCTTGTGCCGCTCTAACCCGAAATATCAATTCCGGCAGCTTCGGAATTGTCACCTTGCGGCGTCGTGTCGATAGCGTGTGGGTGCTCCTCAGCCATGGTGAGTGCACCACTGGCGAGTCCGAAGCCCGCGCCTCAATCAGCCATTTTCTCTATACCCAAGCCCATCCGCTTCCACTCCCTTCAGGTGAACGACGACGTGCTCCTCTAAGCAGAATGGGTAAGCGCACACCAAGCGTGGTGTTCAAATCACTATTTGATCCAAGCCGCCGTATTGGGGCGTGGGCGCTGAATCAACTGTATCTCGCACTGCCATCCCCAGACAGAAATTGGGTTCCCGATTGCCAGACTGAGAATTTTCACACCCGCCTCTGGGAAGCCCACCTATTAGCGATTTTTCGTGAACAGGGACTCTTGGTCACCCAGCCTAAAGAATCACCCGATTTTCACATCGAGAATAGGCTGGGAGATGAGGCCTGGGTTGAAGCAGTGACAGCCAACCCGGAAGAGCGGTATGAGCATTTTGGCGCCTCGCCGGTCCCCCCACCCGCTGACCGACATGAGCGTTTCTTAGGAGCGGCTGCAGAAAGGTTTGCGAGGACCATCCAAAACAAATTGGACAAGCGTTACGAATCCCTACCGCACGTGGAGGGTAAGCCGCTCATTCTGGCCTTAGCCGATTTCCATGCGCCCAGTTCAATGCTGTGGAGCAGGGAGTCGCTCATCAGCTATCTCTATGGCTTTGCAGTTCACTCATCTGCGCATCGTGGTACGCACCTGATAACTGTGGAGGAAGAGACATCTCTGCTATCAGGGCGCCCCAACGGCCTATTTACGCTAATGGAAAATGCCCATCTTTCAGCGGTCATTTTCACCAATGCCTGCACAGTGCCAAAGCTCAGCCGAGTGCCGATCTCAGGTGGAGCTCATCTAGACGGGTACCGATACTTGCGGTTTGGTGAGTTTTTCGACCGTTCTCCGGGAGCATCACGAGGTATCCCATTTCTGTTGGATGTAGCGTCCAGCGACTACGGTCAGCTCTGGCCGCAATATGGCTACGAGCCGTGGTCTGCTGAAGTGGAGGTATTCCATAACCCTATGGCACTATACCCGGTGCCTAATGAGTTGATACCAGAAGTCACCCACTGGAGAGAAGTAAACGGAAGAGTCGAGTGCGAATCTTTCTTTGATGTATCCATACTCCGATCCAGAACACTCGTCCTCAGTGCAAACGCTAAGGTTCCGTCACTCGATGAGTTGCTGACAGCAGCCAGTCCTCCAGAGCTCTGA	MSSPAGTLRGIDGMHFDDCRDQRMKEIAAPMFDLIALSLPRGLGFGDSPPVGAWLSEDGISCAALTRNINSGSFGIVTLRRRVDSVWVLLSHGECTTGESEARASISHFLYTQAHPLPLPSGERRRAPLSRMGKRTPSVVFKSLFDPSRRIGAWALNQLYLALPSPDRNWVPDCQTENFHTRLWEAHLLAIFREQGLLVTQPKESPDFHIENRLGDEAWVEAVTANPEERYEHFGASPVPPPADRHERFLGAAAERFARTIQNKLDKRYESLPHVEGKPLILALADFHAPSSMLWSRESLISYLYGFAVHSSAHRGTHLITVEEETSLLSGRPNGLFTLMENAHLSAVIFTNACTVPKLSRVPISGGAHLDGYRYLRFGEFFDRSPGASRGIPFLLDVASSDYGQLWPQYGYEPWSAEVEVFHNPMALYPVPNELIPEVTHWREVNGRVECESFFDVSILRSRTLVLSANAKVPSLDELLTAASPPEL
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0050	CDS	58777	59184	-		hypothetical protein		NP_742220	26986795	1043531			similar to GP:15074850								Unknown[Class 3]				COG5455|COG5455, Predicted integral membrane protein [Function unknown]. ; COG5455|COG5455, Predicted integral membrane protein [Function unknown].	ATGAAGAAAGCCCTAACCGTGATCTGCGCCGCGCTCATGCTCAGCACACCGCTGGCAAGCTTCGCGCAACCGGGCCCGCCTGATCGGCATGATGGCGGCCCATCGCACCAAGGCAACCCGCCACATGGTCAACCACAGCACCAGGGCCGACATGACAATGGCCGCGGACCTGCTTACCGTGATCCAAACTTCCGCCCACAACAAGGCATGCCGATACCTCATAAGCAGTGGCAGCGTGGTCATGCCGTTGATCCTCATTACCGTGGGGACCGTTACTGGGTAACTGACTGGAAAGCGCGCCACCTGTATGCGCCACCTCGTGATCATCGTTGGCTGTATGTGAATGGCGACTATGTTCTGGTGGCCATTGCCAGCGGTGTGATCGTGAACATTCTCACCGGCTACTGA	MKKALTVICAALMLSTPLASFAQPGPPDRHDGGPSHQGNPPHGQPQHQGRHDNGRGPAYRDPNFRPQQGMPIPHKQWQRGHAVDPHYRGDRYWVTDWKARHLYAPPRDHRWLYVNGDYVLVAIASGVIVNILTGY
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0051	CDS	59316	60608	-		sigma-54 dependent transcriptional regulator		NP_742221	26986796	1043532			identified by match to PFAM protein family HMM PF02954								Unknown[Class 3]	biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0030528|transcription regulator activity|IEA	TIGR02974|phageshock_pspF|psp operon transcriptional activator|equivalog|1.8e-44||Regulatory functions|DNA interactions	PF02954|HTH_8, Bacterial regulatory protein, Fis family|395|427|8e-05	COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ; COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	ATGCCTGAAGCCCATCCTCTCATCCTAGCTCTGGTTTCCTACCTCGAGCACGATGCCCTCCCGACCATCGTGTTGGACACCGACTACAACATCCTCGCCGCCAATGCGGCCTATCGCCGTCAGTTTGGCCGGCATGATCAGGCCCCACTGGGCGAGAAGTGCCACAGGGTTTCGCACCACTACGCGGTGCCGTGCGACCAGGCTGGCGAACATTGCCCGATGCGCAAGGCGTGGGACAGCAAGGTACCGGAGCGGGTATTGCACATTCATCACACACCACGCGGCCCGGAGCATGTGGATGTGGAGTTGCGGCCGATCCTGGATGAGCAGGGCAAGGTAGTGGCCTTTGTCGAACGCCTCACCACCATCACCCTCGCCTCGGCGCAGCCTCAGGAGCAAGGGTTGGTCGGCCGCGCGCCAACCTTCAAGGCCGCGCTGGCCAGCCTGCAGCGTGCGGCACCGGCGCAGATCCCGGTGTTGCTGCAGGGGGAGTCGGGGACCGGCAAGGAGCTGTTCGCCCGTGCAGTGCACATGGGCAGCCCCAGGGCCAACGGCCCACTGGTGGTGGTCGACTGCACCGGCCTGACCGAGTCGTTGTTCGAGAGTGAACTGTTCGGCTATGAGAAGGGTGCGTTCACCGGGGCGAATCAGCGCAAGATCGGCTTGGCCGAGGCGGCGCATGGCGGCACCCTGTTCCTCGATGAAATTGGTGAAGTGCCGCTGGCGATGCAGGTGAAGTTGCTGCGCCTGATAGAGTCCGGGAGTTTCCGTCCCGTGGGCAGCCTGCGCACTGTGCATTCGGATTTCCGCCTGATATCGGCCACCCATAAACCACTTAAACAAATGGTCGCGGATGGCTCCTTCCGTGAAGACCTGTATTACCGCATCAGCGGCTTCCCGATTCGTCTGCCTGCATTGCGCGAACGGGTGAAAGATCTGCCGCTGCTCGCACAGAGCCTGCTGCAGCGCATGGCCGGCCAGCCGACGCCCAGGCTGAGTGAAGATGCCTTGCAGCAACTTGCATTGCATCCGTTTCCGGGCAATATCCGCGAGCTGCGCAACATTCTGGAACGCGCGCGTTTGTTTGCCGATGACGGTGTGATCAGGCCAGAGCATTTACCGGAAGACACCGGGCTGACTGGCGCGGCTAAAGGAAGCGGCCGTCGCAATGACTTGGGTGAGCTGGCGCAGGCGCTGGAGCAGTTCAAAGGCTCGCGCAGTGAACTGGCCAGTCATCTTGGCATGAGTGAACGCACGCTGTATCGCCGCTTGAAAGCGCTCGGGCTGAACTGA	MPEAHPLILALVSYLEHDALPTIVLDTDYNILAANAAYRRQFGRHDQAPLGEKCHRVSHHYAVPCDQAGEHCPMRKAWDSKVPERVLHIHHTPRGPEHVDVELRPILDEQGKVVAFVERLTTITLASAQPQEQGLVGRAPTFKAALASLQRAAPAQIPVLLQGESGTGKELFARAVHMGSPRANGPLVVVDCTGLTESLFESELFGYEKGAFTGANQRKIGLAEAAHGGTLFLDEIGEVPLAMQVKLLRLIESGSFRPVGSLRTVHSDFRLISATHKPLKQMVADGSFREDLYYRISGFPIRLPALRERVKDLPLLAQSLLQRMAGQPTPRLSEDALQQLALHPFPGNIRELRNILERARLFADDGVIRPEHLPEDTGLTGAAKGSGRRNDLGELAQALEQFKGSRSELASHLGMSERTLYRRLKALGLN
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0052	CDS	60831	61715	+		metallo-beta-lactamase family protein		NP_742222	26986797	1043533			identified by match to PFAM protein family HMM PF00753								Cytoplasmic[Class 3]	biological_process|GO:0019243|methylglyoxal catabolic process to D-lactate|IEA ; molecular_function|GO:0004416|hydroxyacylglutathione hydrolase activity|IEA	TIGR03413|GSH_gloB|hydroxyacylglutathione hydrolase|equivalog|5.2e-10|3.1.2.6|Cellular processes|Detoxification	PF00753|Lactamase_B, Metallo-beta-lactamase superfamily|21|173|1e-10	COG0491|GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]. ; COG0491|GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only].	ATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTACGACGAGGCGACCTCGACCATCAGCTACCTGGTCATGGACCGTGAAACCCGACAATGCGCATTGATCGACAGCGTGCTGGATTATGACCCCAAGTCCGGGCGCACCTGCAGCGCTTCGGCTGATCGCCTGATCGAGCGTGTGAACGAGCTGAATGCCAGTGTGCGGTGGGTGCTGGAAACTCATGTACACGCCGACCACCTTTCAGCCGCTGCCTATTTGAAGGAAAAGCTGGGCGGCCATACCGCAATTGGCGCGCACATTACCCAGGTGCAGAAAGTGTTTGGCGCCTTGTTCAACGCAGAGCCCGGCTTCGCCCGTGATGGCAGCCAGTTCGATGTGCTGCTCGAAGACGAGGAAGGTTTCCGGATTGGCAACCTGCAGGCCCGTGCGTTGCACACGCCTGGGCACACACCCGCGTGCATGAGTTTCATGATCGAAGATGCCGGCGAGATCGCGGTGTTCGTTGGAGACACCTTGTTCATGCCCGACTATGGCACCGCCCGCTGCGACTTCCCCGGGGCCGATGCCCGCACCTTGTACCGCTCAATCCGTCGCCTGCTGGCTTTCCCCGATCAGACGCGGTTGTTCATGTGCCACGACTACCTGCCAGGTGGCCGCGACATGCAGTACGTCACAACTGTCGCCGAGCAGCGCGCCCACAACATTCACATCCATCAGGGTATCGATGAGGACAGCTTCGTTGCCATGCGCGAAGCGCGCGACAAGACGCTCGAAATGCCTGTGCTGATCCTGCCTTCAGTGCAGGTGAACATGCGTAGCGGCCAACTGCCCCCACCGGAGGCGAACGGTGTGAGCTATCTGAAGATCCCGCTGAACAAGCTGTAA	MIIGNNLHVDAFYDEATSTISYLVMDRETRQCALIDSVLDYDPKSGRTCSASADRLIERVNELNASVRWVLETHVHADHLSAAAYLKEKLGGHTAIGAHITQVQKVFGALFNAEPGFARDGSQFDVLLEDEEGFRIGNLQARALHTPGHTPACMSFMIEDAGEIAVFVGDTLFMPDYGTARCDFPGADARTLYRSIRRLLAFPDQTRLFMCHDYLPGGRDMQYVTTVAEQRAHNIHIHQGIDEDSFVAMREARDKTLEMPVLILPSVQVNMRSGQLPPPEANGVSYLKIPLNKL
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0053	CDS	61756	63024	+		hypothetical protein		NP_742223	26986798	1043534			similar to GP:9948381								Unknown[Class 3]			PF07992|Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase|14|310|1e-08	COG0446|HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]. ; COG0446|HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	ATGCCTGCCTTGTTGTCCCCTGCCAATACCGACCACCACAAGGTGGTCATCGTCGGTGCCGGTGCCGCCGGAATCGCCACTGCTTCCAGCCTGATCAGCCGCGACCCATCGTTGGACGTCGCCTTGATCGACCCTGCCGAAGTGCACTACTACCAACCCGGCTGGACCATGGTCGGTGCCGGTGTGTTCAAGGCACCAAGCACTGCCCGCACCATGGCGTCGACCATTCCTCGCGGTGTGCGCTGGGTCAAGGCGCGGGTAAAGGGATTCGACCCATTGGCCCAGTTGGTCATCCTCGATGATGGTCGCGCCATCAGCTATGAACAGCTGATCGTCTGCCCCGGCCTCAAGCTGGACTGGGCGGCCATTGATGGGCTCAGCGAGACCCTGGGCCGCAACGGTGTCACCTCCAACTATCGCTACGACCTGGCACCCTATACCTGGGAGCTGGTGCAAAAGCTCAAGCAAGGACGCGCGTTGTTCAGCCAGCCGCCCATGCCGATCAAGTGCGCCGGTGCACCACAGAAGGCGCTGTATCTGTCTTGCGACCACTGGCTGCGCCATGGCCATTTGGGGGCGGTGAAAGCCAGCTTCTACAATGCGGGTGCCGTACTGTTCGGTGTCGCCGACTATGTGCCCGCGCTGATGAAGTACATCGAGAAATACGCCGTCGACCTCAACTTCTCCCACAGGTTGGTAGCAGTAGACGGCCCGGGAAAGCGCGCTACATTCTTGCGTACCCTGCCCGATGGCAGCAGCGAAACGCGCATCGAGGCCTTCGACATGCTGCACGTGGTACCGCCACAGGTGGCGCCAGACTTCATTCGCGAAAGCCCCTTGGCGGATAGCTCCGGCTGGGTTGACGTCGATCCGCATACCCTGCGCCATCGCAAATACACCAACGTTCATGCCCTAGGTGACGTGGCTAACACCAGCAATGCCAAGACCGCCGCTGCGGCGCGCAAGCAGGCACCGGTGGTCGCCAACAATGTGCTGGTGGCGCTGGGCAGGCTGGCGACCTTGGCCCAGTACGACGGCTATGGCTCGTGCCCGCTTACCGTCGAGCGCGGCAAGATCGTCCTGGCCGAGTTCACCTATGGCGGCAAGCTGGCCCCGAGCTTCCCCAACTGGTTACTGGATGGCCGCAAGCCGACCCGTCTGGCCTGGCTGCTCAAGGCACAGGCGCTGCCACCGCTGTACTGGCAAGGCATGCTCAAGGGGCGCGAGTGGTTGGCACGCCCGCAGCTGGTAGCCGAGGGTGGGCAGTGA	MPALLSPANTDHHKVVIVGAGAAGIATASSLISRDPSLDVALIDPAEVHYYQPGWTMVGAGVFKAPSTARTMASTIPRGVRWVKARVKGFDPLAQLVILDDGRAISYEQLIVCPGLKLDWAAIDGLSETLGRNGVTSNYRYDLAPYTWELVQKLKQGRALFSQPPMPIKCAGAPQKALYLSCDHWLRHGHLGAVKASFYNAGAVLFGVADYVPALMKYIEKYAVDLNFSHRLVAVDGPGKRATFLRTLPDGSSETRIEAFDMLHVVPPQVAPDFIRESPLADSSGWVDVDPHTLRHRKYTNVHALGDVANTSNAKTAAAARKQAPVVANNVLVALGRLATLAQYDGYGSCPLTVERGKIVLAEFTYGGKLAPSFPNWLLDGRKPTRLAWLLKAQALPPLYWQGMLKGREWLARPQLVAEGGQ
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0054	CDS	62982	63839	+		hypothetical protein		NP_742224	26986799	1043535			similar to GP:9949599, and GP:9949599								Cytoplasmic Membrane[Class 3]			PF01925|DUF81, Domain of unknown function DUF81|24|279|7e-11	COG0730|COG0730, Predicted permeases [General function prediction only]. ; COG0730|COG0730, Predicted permeases [General function prediction only].	GTGGTTGGCACGCCCGCAGCTGGTAGCCGAGGGTGGGCAGTGATCGAGCATCAACTGTTAGGGGCGGGTCTGGGCGCAATCATCGGCGCGGTGCTGGCGCTGACCGGCGCAGGCGGTGGCATTCTCGCAGTACCCTTGCTGGTGTTCGGCCTGGGGCTATCGATGGTCGAAGCGGCACCGGTGGGCCTGTTGGCTGTAGGTTTGGCATCAGCGGTTGGTGCGGTGCTGGGCTTGCGCCAAGGGCTGGTGCGTTATCGGGCTGCGCTGTTCATCGCGTTGGTTGGTGTTGCAGCAGCGCCGTTCGGGCTGATGCTGGCGCACCGCCTGCCGAATGCACCGTTGCAGGTGGTATTCGCCGGCGTGCTGGTTTATGCCTGCCTGCGCATCTGGCGCAAGGCGGCCAAAGAACTGTGTGGCGAAGCCAATGGCGCTCATCGCTTTATCGAGCCGTGTGTGCTGAACCCGCTGCAGGGTCGTTTGCGCTGGACCCTGCCCTGCGCGCGCGCACTGGCATTCACGGGTGCCTTGTCCGGGTTGTTGTCCGGCTTGCTGGGCGTGGGTGGGGGGTTCGTCATCATCCCTGCCCTGAACCGCTACACCAACCTGCGCATGGCCAGCATCGTCTCCACCTCGCTGGCGGTGATTGCCCTGGTCTCTACCGGCAGTGTGGTCAGCGCCAGCCTTGCGGGCGTCATGCACTGGCAGGTTGGCGCCCCGTTTGCCGTCGGCGCAGTGCTCGGTCTGCTGCTGGCGCGGCCTTTGGCAGCCAGATTGGCCGGGCCGCGTCTGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAG	MVGTPAAGSRGWAVIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEAAPVGLLAVGLASAVGAVLGLRQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNAPLQVVFAGVLVYACLRIWRKAAKELCGEANGAHRFIEPCVLNPLQGRLRWTLPCARALAFTGALSGLLSGLLGVGGGFVIIPALNRYTNLRMASIVSTSLAVIALVSTGSVVSASLAGVMHWQVGAPFAVGAVLGLLLARPLAARLAGPRLQQMFAVAGWAAALLLAGKALLG
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0055	CDS	63828	64715	-		transcriptional regulator, LysR family		NP_742225	26986800	1043536			identified by match to PFAM protein family HMM PF03466								Cytoplasmic[Class 3]		TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|9.6e-08||No Data|No Data	PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|4|62|1e-08	COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription].	ATGTTCGACTGGAATGATCTGCGGTTTTTCCTCGAGTTGCAGCGCAGCGGCCGCTTGCTGACCGCCGCCAAGCGCCTGAACACTACCCACAGCACCGTGGCCCGGCATATCGAGAGCATCGAGCAGAGCCTGGGGACCGCGCTGTTCGTGCAACATGCCCAGGGGTACGAGCTGACCCCCTCGGGTCAAGCCCTGCTCAAGCATGCCGAAGCCATGGAGAACGTCGCCCTGCTGGCACAGGAGGAAATCACCCAGGCCATCACCCCGCTGGGCAAGATTCGCCTGGGGGTAACCGAAGGCATCGGCATCATGTTCTTCACCCCACGCATGAACGCGTTGTTCGAGCGCTACCCCGGCCTGGAGGTGGAATTGGTAGCGGTGCCGCGCTTCGTCAGCATCCTCAACCGCGAGGCAGAAATCAGCATCCATCTGGAGCGGCCCAACGCCGATCTGCTGATCACCCGCAAACTCACCGACTACCGCCTGGCGCTATACGCCAGCCAGGCCTACCTGGACCGCGCGCCGCCACTGCGCCACCGCGAAGACCTGGCCCGGCACAGCTGGATCGGCTACGTTGACGATTTGCTGTTCAGCCAGGAACTGCTGTTTCTCAACAGTTTCTGCCGAGTACCCAACGTGGTGTTTCGAAGCACCAGCGTGATCGCCCAGCAAGCCGCCGCCCGCGCCGGGCTGGGCATCGCCGTGCTGCCCAACTACATGGCCCGCCACGACCCGACACTGGTGCGCGTGCTGCCGGGAGAAACCATCCAGCGCAGCTACTGGATCTGCACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAG	MFDWNDLRFFLELQRSGRLLTAAKRLNTTHSTVARHIESIEQSLGTALFVQHAQGYELTPSGQALLKHAEAMENVALLAQEEITQAITPLGKIRLGVTEGIGIMFFTPRMNALFERYPGLEVELVAVPRFVSILNREAEISIHLERPNADLLITRKLTDYRLALYASQAYLDRAPPLRHREDLARHSWIGYVDDLLFSQELLFLNSFCRVPNVVFRSTSVIAQQAAARAGLGIAVLPNYMARHDPTLVRVLPGETIQRSYWICTRRELHKSVRLRVVWDYLLALCAAEQSELLAE
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0056	CDS	64943	66595	+		oxidoreductase, GMC family		NP_742226	26986801	1043537			identified by match to PFAM protein family HMM PF00732								Cytoplasmic[Class 3]	biological_process|GO:0019285|glycine betaine biosynthetic process from choline|IEA ; molecular_function|GO:0008812|choline dehydrogenase activity|IEA	TIGR01810|betA|choline dehydrogenase|equivalog|1e-124|1.1.99.1|Cellular processes|Adaptations to atypical conditions	PF05199|GMC_oxred_C, GMC oxidoreductase|387|528|2e-34	COG2303|BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]. ; COG2303|BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	TTGCACATGCCATCAGCCGATTCTGTCTTCGACTACGTGGTCGTAGGGGCCGGCCCCGCCGGATGCCTGCTGGCCAATCGTTTGTCCGCCGACCCTTCCTGCCGCGTGCTGCTGCTGGAGGCGGGTGGCCGTGACAATTATCCCTGGATCCACATCCCCGTTGGTTACCTCTACTGCATCGGCAACCCGCGCACAGACTGGTGCTTCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCGCAGTGGTGTGCGCTGGAATGCTTCCAAAGCTTTCCTGCGGCCGATCAAGGATCGCGCCAACCTCACTGTGCTGACCGGCGTGCAGGTTGACCAAGTACTGCTCGACAACACCCGCGCAAGGGCGGTGAAGGCGCTCTGGCAAGGGGCCTGGCATGAGTTTGCGGCGCGCCGCGAGATCATCCTCTGTGCTGGGGCGGTAGGTTCACCGGGCATCCTCCAGCGCTCCGGCATCGGCCCGCGCCAGTTGCTGGAAAGCTTGGGTATTGGTGTTCGCCACGACATGCCAGGCGTTGGTGGCAACTTGCAGGACCACCTGCAACTGCGCCTGATCTACCAGATCCGCAACACCCGTACCTTGAACCAGATGGCCAACAGCCTGTGGGGCAAGATGGGCATGGGCCTGCGTTACCTCTACGACCGTAGCGGGCCGCTGGCCATGGCGCCGAGCCAGTTAGGCGCGTTCGTGCGTTCAAGCCCCGAACAGGCCACCGCCAACCTTCAGTATCACGTGCAGCCGCTGTCACTGGAACGCTTCGGTGAGCCGTTGCATCAGTTCCCGGCCTTTACTGCCTCGGTGTGCAACCTGCGCCCGGCCAGCCGCGGGCGCATCGACATCTGCAGCACCGACATGAACAGCACGCCGCGGATCGACCCCAATTACCTCAGTGCTCCGCAGGACTTGCGGGTTGCTGCCGATGCCATTCGCCTTACCCGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCACCCTGATGATCGCCGAAAAGGCGGCGCAACTGATCCTCAAAGGAGCTGCTACCCAGACCTACCTGAACCAAGACGCGTTACCGACGCCCTGA	MHMPSADSVFDYVVVGAGPAGCLLANRLSADPSCRVLLLEAGGRDNYPWIHIPVGYLYCIGNPRTDWCFKTEAQPGLGGRALGYPRGKVLGGCSSINGMIYMRGQAADYDHWAAQGNDGWAWKDVLPLFKASENHFAGASEHHGAEGEWRVERQRYSWPILDAFRDAAEQSGIGKVDDFNTGDNQGCGYFQVNQRSGVRWNASKAFLRPIKDRANLTVLTGVQVDQVLLDNTRARAVKALWQGAWHEFAARREIILCAGAVGSPGILQRSGIGPRQLLESLGIGVRHDMPGVGGNLQDHLQLRLIYQIRNTRTLNQMANSLWGKMGMGLRYLYDRSGPLAMAPSQLGAFVRSSPEQATANLQYHVQPLSLERFGEPLHQFPAFTASVCNLRPASRGRIDICSTDMNSTPRIDPNYLSAPQDLRVAADAIRLTRRIVQAPALAAFEPKEYLPGPALQSEEDLFEAAGKIGTTIFHPVGTCRMGNGAMDVVDNQLRVHGIPGLRVADASIMPQITSGNTCSPTLMIAEKAAQLILKGAATQTYLNQDALPTP
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0057	CDS	66693	68312	+		major facilitator family transporter		NP_742227	26986802	1043538			identified by match to PFAM protein family HMM PF00083								Cytoplasmic Membrane[Class 3]	biological_process|GO:0006810|transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; molecular_function|GO:0015295|solute:hydrogen symporter activity|IEA	TIGR00883|2A0106|MFS transporter, metabolite:H+ symporter (MHS) family protein|subfamily|6.4e-104||Transport and binding proteins|Unknown substrate	PF07690|MFS_1, Major Facilitator Superfamily|67|332|1e-10	COG2814|AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. ; COG2814|AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	ATGTCGGATTACATCCAAGAGCAGGGGGCGGCGGCCAGTAGCTCCAGCCGCCGTGAAGAACGCAAGATCATTTTCGCGTCATCCCTCGGGACGGTTTTCGAGTGGTATGACTTTTTTCTCTATGGTGCGCTGGCAGCGGTCATCAGCAAGCAGTTCTTCGCTGGCGTGAACGATACCACCGCTTTCATCTTCGCCCTGATGGCCTTCGCTGCGGGCTTTCTGGTGCGGCCGTTTGGCGCGCTGGTGTTCGGCCGCCTGGGTGACATGATCGGGCGCAAGTACACCTTCCTGGTCACCATCGTGCTGATGGGCCTGTCCACTTTCGCTGTGGGGTTGTTGCCCACCTACGCCAGCATCGGCATCGCCGCACCGATCATCCTGGTGATCCTGCGCATGCTTCAAGGGCTGGCGCTGGGCGGCGAGTATGGCGGTGCAGCCACTTACGTGGCCGAGCATGCGCCGCCTGGCAAGCGTGGCTTGCACACTGGTTTCATCCAGTCCACCGCAACGCTGGGCCTGTTGTTGTCGCTCTTGGTGGTGCTGGGTAGCCGGTATATCAGTGGCGACCAGTTCGAAACCTGGGGCTGGCGCTTGCCGTTCCTGCTGTCGATCGTGCTGTTGGCGATCTCCACCTGGATTCGCATGAGCATGCACGAGTCGCCGGCCTTTGTGAAAATGAAGGCTCAGGGCAAGGTCAGCAAGTCGCCCATCCGTGAGTCATTCACCTCCTGGCCAAACCTGAAAGTGGTGCTTACCGCCCTGTTCAGCATCAACGCGGGGCAGGCTGTGACCTTCTACACGGCGCAGTTCTACGTTCTGTTCTTCATGACCCAGATGCTGAAAATGGACTCGGCTCAGGCCAACACCCTGCTCATCATCAGCGTTGTGATTGGCGCGCCGTTCTTCGTGTTCTTCGGCTGGTTGTCCGACCGTATCGGCCGCAAGCCGATCCTGATGCTCGGCCTGTTGCTGGCCACGGTACTGTACTTCCCACTGTTCAAGGCGCTGAGCCACTACGCCAACCCGCAGATCGACGCTGCCAGCCGTCAGGCGCCGATCGTGGTCACCGCCGACCCGCAAGGCTGCACATTCCAGTTCGACCCCGTGGGCAAGGCTCGTTTTGACAGCCCGTGCGACAAGGTCAAGACCTTCCTGGTCAAGCAGGGCCTGCCGTACAGCTCGGTTAGCGTGGCCGGCAGTGAAGTGGTGGTCAACATCGGTGACAAGACCATCAACGGCTTTGACGAAACCGCCATGCGTGCTGCAATCGAGCAGGCTGGTTACCCGGCCAAGGCGGACCCTGCGCAGGTCAACCAGGTAATGGTGGTGGTACTGATCGTGGCGATGATCCTGATCGCGACCATGACCTATGGCCCGTTGGCGGCGGTGATGGTCGAGCTGTTCCCGACCCGCATCCGCTACACCTCGATGTCGCTGCCCTATCACATTGGTAATGGCTGGTTTGGTGGTTTCCTGCCTACCGTATCGTTTGCGCTGGTGGTCTATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTATGA	MSDYIQEQGAAASSSSRREERKIIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFLVRPFGALVFGRLGDMIGRKYTFLVTIVLMGLSTFAVGLLPTYASIGIAAPIILVILRMLQGLALGGEYGGAATYVAEHAPPGKRGLHTGFIQSTATLGLLLSLLVVLGSRYISGDQFETWGWRLPFLLSIVLLAISTWIRMSMHESPAFVKMKAQGKVSKSPIRESFTSWPNLKVVLTALFSINAGQAVTFYTAQFYVLFFMTQMLKMDSAQANTLLIISVVIGAPFFVFFGWLSDRIGRKPILMLGLLLATVLYFPLFKALSHYANPQIDAASRQAPIVVTADPQGCTFQFDPVGKARFDSPCDKVKTFLVKQGLPYSSVSVAGSEVVVNIGDKTINGFDETAMRAAIEQAGYPAKADPAQVNQVMVVVLIVAMILIATMTYGPLAAVMVELFPTRIRYTSMSLPYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLVTGISLVVGIFCLRETKDVDIDKV
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0058	CDS	68487	69272	-		1-acyl-sn-glycerol-3-phosphate acyltransferase, putative		NP_742228	26986803	1043539			similar to GP:11120074								Cytoplasmic Membrane[Class 3]		TIGR00530|AGP_acyltrn|1-acylglycerol-3-phosphate O-acyltransferases|subfamily_domain|1.6e-25|2.3.1.51|Fatty acid and phospholipid metabolism|Biosynthesis	PF01553|Acyltransferase, Acyltransferase|69|191|4e-21	COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ; COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism].	ATGGTACAAGCCACTATGTCGATCCTGCAGGCGATCAGAATCTTTCTTTTTTACCTGCTGCTGGGCACCAGTTCGCTGCTGTGGTGCTCGCTGAGCTTCTTCGTCGCGCCGTTCCTGTCGTTCCCCAAGCGCTACAAGTTCATCAACGTGTACTGGTGCCGCTGCGCGCTGTTTCTGGTGCGCACCATCCTGGGCATCGACTACAAGATCACTGGCGCCGAGAACGTGCCAGCTGAGCCTTGCGTGATTTTGTCCAATCACCAGAGCACCTGGGAAACCTTCTTCCTGTCCCAGTACTTCTCGCCGCTTAGCCAGGTGCTCAAGCGCGAGCTGCTGTATGTACCGTTCTTCGGCTGGGCCATGGCCATGCTGCGGCCCATCGCGATCAACCGCGACAACCCAAAGGAAGCGCTACGGCAGGTAGCGAGCAAGGGTGACGAACTGCTCAAGCAGAAGACGTGGGTGCTGATTTTCCCAGAAGGCACCCGTGTACCGTTCGGCACCATCGGCAAGTTCTCGCGCGGCGGTACCGCCCTGGCCGTGAATGCCGGGCTGCCGGTGCTGCCGATTGCCCACAACGCCGGCAAGTTCTGGCCCAAGACCGGTTGGGGCAAGCGTGCCGGTACAATCGAAGTGGTAATTGGTGAGCCGATGTACGCCAACGGCACGGGGCCACGTGCCATTGCCGAACTCAACGACCGCGCTGCAGCTTGGAACGAAGCGACCCAGCGGGCCATGGGATCGCTGCCGCCAGCTGCGGAAAAACCTCAGGAGCAGATGGCTTGA	MVQATMSILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLSFPKRYKFINVYWCRCALFLVRTILGIDYKITGAENVPAEPCVILSNHQSTWETFFLSQYFSPLSQVLKRELLYVPFFGWAMAMLRPIAINRDNPKEALRQVASKGDELLKQKTWVLIFPEGTRVPFGTIGKFSRGGTALAVNAGLPVLPIAHNAGKFWPKTGWGKRAGTIEVVIGEPMYANGTGPRAIAELNDRAAAWNEATQRAMGSLPPAAEKPQEQMA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0059	CDS	69319	69846	-		D,D-heptose 1,7-bisphosphate phosphatase		NP_742229	26986804	1043540			Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate								Cytoplasmic[Class 3]		TIGR01656|Histidinol-ppas|histidinol-phosphate phosphatase family domain|subfamily_domain|1.2e-54||No Data|No Data	PF00702|Hydrolase, haloacid dehalogenase-like hydrolase|11|147|4e-07	COG0241|HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ; COG0241|HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism].	TTGAAACTGCTGATTCTCGACCGTGACGGGGTGATCAACTACGACTCCGATGCGTACATCAAGACGCTGGAAGAATGGGTGCCGATCCCCGGTTCGGTCGATGCGATCGCGCAGTTGAGCAAGGCGGGCTGGACGGTGGCCGTGGCCACCAACCAGTCCGGCATTGCCCGTGGCTACTATCCGCTGGCAACCCTTGAGGCCATGCATGCGCGCCTGCGCGCGCTGGTGGCCGAGCAGGGCGGTGAGGTGGGCCATATCGTGTATTGCCCGCATGGGCCGGACGAAGGGTGCGATTGCCGCAAGCCCAAGCCCGGCATGTTGCGGGCGATCGCCGAGCATTACCAGATCGGCCTTGAAGGCGTCTGGTTCGTCGGCGACAGCAAAGGTGACCTGGAGGCCGCCCTGGCCGTCGGTGCACAACCCGTGCTGGTGAAGACCGGCAAGGGCGAGCGGACCCTGGAAAAAGGCGTCCCGGAAACTACACTGATTTTCGACGATCTGGCAGCTATCGCCAGAGAACTAATTTAA	MKLLILDRDGVINYDSDAYIKTLEEWVPIPGSVDAIAQLSKAGWTVAVATNQSGIARGYYPLATLEAMHARLRALVAEQGGEVGHIVYCPHGPDEGCDCRKPKPGMLRAIAEHYQIGLEGVWFVGDSKGDLEAALAVGAQPVLVKTGKGERTLEKGVPETTLIFDDLAAIARELI
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0060	CDS	69850	71904	-	glyS	glycyl-tRNA synthetase subunit beta		NP_742230	26986805	1043541			glycine--tRNA ligase beta chain						6.1.1.14		Cytoplasmic[Class 3]	biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA	TIGR00211|glyS|glycyl-tRNA synthetase, beta subunit|equivalog_domain|9e-224|6.1.1.14|Protein synthesis|tRNA aminoacylation	PF05746|DALR_1, DALR anticodon binding domain|579|671|2e-05	COG0751|GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ; COG0751|GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis].	ATGAGTGCTCAAGATTTCCTGGTAGAACTGGGCACCGAAGAGCTGCCACCCAAGGCCCTCGCCAGCCTTGGCGACGCCTTCCTGGCCGGTATCGAAAAAGGCCTGCAGGCTGCTGGCCTGAACTACACCGGCAAGCAGGTGTACGCCGCGCCGCGTCGTCTGGCCGTGCTGATTCGCCAGCTGGACGTGCAGCAACCTGACCGCAGCATCAACATCGACGGCCCGCCCCTGCAGGCTGCCTTCAACGCCGAAGGCGAGCCGACCCAGGCTGCGCTGGGCTTCGCCAAGAAGTGCGGTGTGGAACTGGCCGAGATCGACCAGAGCGGCCCCAAGCTGCGCTTCTCCCAGCACATCCCGGGCAAGGCTACCGTTGGGCTGCTGCCGACCATCGTCGAAGATTCGCTGAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGCGGCCAGCCGTGAAGAGTTCGTGCGCCCGACCCAATGGCTGGTGATGCTGCTGGGCGATCAGGTGGTCGATTGCACCATCCTGTCGCAGAAGGCCGGGCGTGAATCCCGTGGCCACCGCTTCCACCATCCGGAAAACGTGCTCATCACCACCCCGGCCAACTACGTCGAAGACCTGCGCAAGGCCTACGTCCTGGCCGACTTCGCCGAGCGCCGCGAGCTGATCAGCAAGCGTACCGCAGAGCTGGCCATGCAGCAGGAAGGCACGGCCATCGTGCCACCGGCGCTGCTGGACGAAGTGACCGCTCTGGTCGAGTGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAGCGTTTCCTCGAGGTGCCGCAAGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACAGCGAAGGCAAGCTGCTGCCGCGCTTCATTACCGTGGCCAACGTCGAAAGCCGCGACCCGAAGCAGATCGTGCAAGGCAACGAAAAAGTCGTGCGCCCGCGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGAAGCAGCCACTGGAAACCTTCAACGAGCGCCTCAAGAACGTGGTGTTCCAGGCTCAGCTCGGCACCGTGTACGACAAGGCCGAACGTGTTTCCAGGCTGGCCGCCTTCATTGCTCCGCTGATCGGCGGCGACGCCCAGCGCGCTGGCCGTGCCGGCCTGCTGTCGAAGTGCGACCTGGCCACCGAGATGGTCGGCGAATTCCCTGAAATGCAGGGTGTTGCCGGTTACTACTACGCGCTCAACGACGGTGAGCCGGAAGACGTAGCCCTGGCCCTGAACGAGCAGTACATGCCGCGCGGTGCAGGCGCCGAGCTGCCGCAGACCCTGACCGGTGCTGCCGTGGCCATCGCCGACAAGCTCGACACCCTGGTGGGTATCTTTGGCATCGGCATGCTGCCTACCGGCAGCAAGGACCCGTACGCCCTGCGCCGTGCTGCTCTGGGCGTGCTGCGTATCCTGATCGAGAAGCAACTGGACCTGGACCTGACCGGCGCGGTTGAGTTTGCGGTCAAGCAGTTCGGCGCCAAGATCAAGGCCCCCGGCCTGGCCGAGCAAGTACTGGAGTTCATTTTCGACCGCCTGCGCGCGCGTTACGAAGACGAAGGCATCGACGTCGCCACGTACCTGTCGGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGAGCAGGTCGAGCCGAAGTACTTCGACAATGCCAACGAGTTCTCCCTGTACTCGGCCATCCAGCAGGCCGACCAGGCCGTGCAACCGATGGCTGCAGCACGTCAGTACAGCGAATCGCTGGCCCGCCTGGCGGCCCTGCGTGACCCGGTCGATGCCTTCTTCGAGGCGGTCATGGTCAACGCCGAAGACGCCAAGGTACGTGCCAACCGTTATGCCCTGCTCAGCCGTCTGCGCGGCCTGTTCCTGGGCGTGGCTGACATTTCGCTGCTGGGGTAA	MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQQPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGVELAEIDQSGPKLRFSQHIPGKATVGLLPTIVEDSLNDLPIPKRMRWAASREEFVRPTQWLVMLLGDQVVDCTILSQKAGRESRGHRFHHPENVLITTPANYVEDLRKAYVLADFAERRELISKRTAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGKLLPRFITVANVESRDPKQIVQGNEKVVRPRLTDAEFFFKQDKKQPLETFNERLKNVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRAGRAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEFAVKQFGAKIKAPGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQAFRKLPEAEALAAVNKRVSNLLSKAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADISLLG
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0061	CDS	71901	72848	-	glyQ	glycyl-tRNA synthetase subunit alpha		NP_742231	26986806	1043542			glycine--tRNA ligase alpha chain						6.1.1.14		Cytoplasmic[Class 3]	biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA	TIGR00388|glyQ|glycyl-tRNA synthetase, alpha subunit|equivalog_domain|3.4e-169|6.1.1.14|Protein synthesis|tRNA aminoacylation	PF02091|tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit|11|298|1e-149	COG0752|GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. ; COG0752|GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis].	GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACCTGATCCTCGCCCTGCAGAACTACTGGGCAGCTCAAGGTTGTGTGGTACTTCAGCCCTACGATATGGAAGTAGGCGCCGGCACTTTCCACACCGCTACATTCCTGCGCGCCGTGGGTCCAGAAACCTGGAACGCCGCCTATGTGCAGCCTAGCCGTCGTCCTGCCGACGGGCGGTATGGCGAAAACCCCAACCGCCTGCAGCACTACTACCAGTTCCAGGTGGTGCTCAAACCGAACCCGGCCAACTTCCAGGAGCTGTACCTCGGCTCGCTGAAAGCCATCGGCCTGGATCCGCTGGTGCACGACATTCGTTTCGTCGAAGACAACTGGGAATCGCCGACCCTCGGCGCCTGGGGTCTGGGCTGGGAAATCTGGCTCAACGGCATGGAAGTCACCCAGTTCACCTACTTCCAGCAGGTTGGCGGCATCGAGTGCTACCCGGTCACCGGTGAAATCACCTACGGCCTGGAGCGCCTGGCCATGTACATCCAGGGCGTCGATTCGGTGTACGACCTGGTGTGGGCCGACGGCCCGTTCGGCAAGGTCACCTATGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTTGAACATGCAAACGTCGACAAACTGTTCGAACTGTTCGATTTCTACGAAAGCGAAGCCAACCGCCTGATCAAGCTGGAGCTGCCGCTGCCGACCTATGAAATGGTCCTGAAGGCATCGCATACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGCTTCCCGATGGCCACCCCTGAACTGCGTGACGAAGTGTTGGCTAAGCTGGAGGCTGCACAATGA	MSQPTPAVRTFQDLILALQNYWAAQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPADGRYGENPNRLQHYYQFQVVLKPNPANFQELYLGSLKAIGLDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYIQGVDSVYDLVWADGPFGKVTYGDVFHQNEVEQSTYNFEHANVDKLFELFDFYESEANRLIKLELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARDVAQSYLQARARLGFPMATPELRDEVLAKLEAAQ
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0062	CDS	72932	73483	+	tag	DNA-3-methyladenine glycosidase I		NP_742232	26986807	1043543			similar to SP:P05100								Cytoplasmic Membrane[Class 3]	biological_process|GO:0006281|DNA repair|IEA ; molecular_function|GO:0008725|DNA-3-methyladenine glycosylase I activity|IEA	TIGR00624|tag|DNA-3-methyladenine glycosylase I|subfamily|5.2e-124|3.2.2.20|DNA metabolism|DNA replication, recombination, and repair	PF03352|Adenine_glyco, Methyladenine glycosylase|6|179|6e-71	COG2818|Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ; COG2818|Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair].	ATGCCACGCTGCTTTTGGTGTACCGACGATCCGTTGTACCAGGCCTACCACGACCAGGAATGGGGAATGCCACAGCGCGACCCGGCGTTGCTCTTCGAGATGCTTTTGCTCGAAGGGTTCCAGGCGGGGCTTTCGTGGATTACCGTTTTGCGCAAACGCGAGCGTTATCGCCAGGTGATGTACGGCTTCGACCCGGTAAAGCTGGCGGCCATGAGCGACGAACGCATCGAAGAATTGATGCAGGATGCAGGCATCATCCGCAATCGCCTCAAGCTCAAGGCCGCAAGGCGCAACGCCCAGGCCTGGCTGGCTGTGGATAACCCTGCCGAATGGCTGTGGTCGTTCGTCGGCGGCTCACCGAAGATCAACCACTTCAAGCAGCGCAGCGACGTGCCGGCGGTCACCGATGAAGCCAAGGCAATGAGCAAGGCCCTGCAGAAAGCTGGCTTCACGTTCGTCGGTCCGACCATCTGCTACGCCTTCATGCAGGCCACCGGCATGGTCATGGACCACACCACCGACTGCGATCGCTACGCCGCCTTGTTGCGCTGA	MPRCFWCTDDPLYQAYHDQEWGMPQRDPALLFEMLLLEGFQAGLSWITVLRKRERYRQVMYGFDPVKLAAMSDERIEELMQDAGIIRNRLKLKAARRNAQAWLAVDNPAEWLWSFVGGSPKINHFKQRSDVPAVTDEAKAMSKALQKAGFTFVGPTICYAFMQATGMVMDHTTDCDRYAALLR
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0063	CDS	73525	74412	+		lipid A biosynthesis lauroyl acyltransferase		NP_742233	26986808	1043544			Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA								Cytoplasmic Membrane[Class 3]	biological_process|GO:0009245|lipid A biosynthetic process|IEA ; molecular_function|GO:0008415|acyltransferase activity|IEA	TIGR02207|lipid_A_htrB|lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase|subfamily|1.3e-16|2.3.1.-|Cell envelope|Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides	PF03279|Lip_A_acyltrans, Bacterial lipid A biosynthesis acyltransferase|8|286|1e-39	COG1560|HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. ; COG1560|HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane].	GTGGAAAAGTTCAAGGGCGCCCTGATGGTCGGGGTGCTGCGCCTGTTTGCCAAGCTGCCCTGGGGCGCTGTGCAGCGTGTCGGCACCGGTATTGGCTGGCTGATGTGGAAAATCCCCAACAGTTCGCGCAACGTGGTACGGATCAACCTGGCCAAATGCTTCCCGGAGATGGACCCGGTTGCCCGTGAGCAACTGGTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTTTGTCGAAAGTGCCTGTGCCTGGATCTGGCCGCCGCAACGCTCGCTGGAGCTGGTCAAGGAAGTGCATGGCCTGGAAGTGCTGGAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGATGAGCAAGGTGGTCGAACGCTATGTGCGCGAGTACCCCAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAA	MEKFKGALMVGVLRLFAKLPWGAVQRVGTGIGWLMWKIPNSSRNVVRINLAKCFPEMDPVAREQLVGQALRDIGKSFVESACAWIWPPQRSLELVKEVHGLEVLEQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDDLLREQRVQMGNRVAPSTKEGILSVIKEVRRGGQVGIPADPEPAESAGVFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGFKVFLEAAPEEMYSTDVNVSAAAMSKVVERYVREYPSQYMWSMKRFKKRPAGEPRWY
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0064	CDS	74510	74824	-		TPR domain protein		NP_742234	26986809	1043545			similar to GP:9945834								Cytoplasmic[Class 3]				COG4783|COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]. ; COG4783|COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only].	ATGCGCGAATCGCTGGAGAAGATGCTGGCCAAAGGTGTGGATAACCCGCTGCTGAGGTTTGGCCTGGGCAAGGCCTGGCTGGATGAAGGCAACGGCGCTGAAGCAGCGGTGCACCTGGCACGCTGTGTAGAGCAGGATCCGAAATACTCGGCAGCATGGAAGCTGCTGGGTAAGGCCTATCAGCTGCAGGGCGAGCTGGCGGCGGCGCGCAAAGCGTGGGAAGACGGGATCGTGGCGGCGCAGGCCCATGGTGACAAGCAGGCCGAAAAAGAAATGACCGTTTTTCTCAAGAAGCTGAACAAGACATCGGCTTGA	MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLARCVEQDPKYSAAWKLLGKAYQLQGELAAARKAWEDGIVAAQAHGDKQAEKEMTVFLKKLNKTSA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0065	CDS	74836	76209	-	trkA	potassium transporter peripheral membrane component		NP_742235	26986810	1043546			involved in potassium uptake								Cytoplasmic[Class 3]			PF02080|TrkA_C, TrkA-C domain|154|225|3e-08	COG0569|TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. ; COG0569|TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	ATGAAGATCATCATCCTCGGCGCAGGGCAGGTAGGCGGTACGCTGGCTGAACACCTGGCCAGCGAAGCCAACGACATTACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTCGGCGACCGCCTGGACATCCGCACCGTCCAGGGCCGTGGCTCACTGCCGACGGTACTGCGTCAGGCCGGTGCCGACGACGCCGACATGCTGGTGGCGGTAACCAACAGTGACGAGACCAACATGGTTGCCTGCCAGGTGGCCTATTCGCTGTTCCATACCCCGACCAAGATTGCACGGGTGCGCGAATCGTCCTACCTGACCCGCGAAGAGCTGTTCGACAACGACCATATCCCGGTCGACGTTCTGATCAGCCCCGAGCAGGTGGTGACCAATTACATCAAGCGCCTGATCGAACACCCAGGCTCGCTGCAGGTGATCGATTTCGCCGAGGGCAAGGCCCAGCTCGTGGCAGTGAAGGCCTACTACGGCGGCCCGCTGGTCGGCCAGCAATTGCGCCAGATCCGCGCGCACATGCCCAACGTCGACACCCGCGTGGCGGCCATCTTCCGCCGCGACCGGCCGATCACCCCGCGTGGCGACACGGTGATCGAAGCCGACGACGAGGTGTTCTTCATTGCCGCGAAGAAGGATATCCGTGCGGTGATGGGCGAACTGCGCCGCATCGACGAAACCAATAAACGCATTGTCATCGCCGGCGGCGGGCAGATCGGCGAGCGCCTGGCGGAGGCCATCGAAAGCCGATATCAGGTGAAGATCATCGAGATGAGCCCGGCGCGTTGCCGGCACCTCTCCGATACCCTGGAAAGCACTGTGGTGCTGCAGGGCAGCGCCTCGGACAAAGACCTGATGCTCGAAGAGAACATCGCCGACGCCGATATTTTCCTGGCCCTGACCAACGATGACGAAGCCAACATCATGTCGTCCTTGCTGGCCAAGCGCCTGGGCGCAGGCAAGGTGATGACCATCATCAACAACCCGGCTTATGTCGACCTGGTACAGGGTGGCGATATCGACATTGCCATCAGCCCGCAGCTCGCCACCATCGGCACACTGCTGGCGCACGTCCGTCGTGGCGACATCGTCAGTGTGCACTCGCTGCGCCGCGGTGCGGCCGAAGCGATCGAGGCGGTGGCACATGGCGATTCGAAGTCGAGCAAGGTGGTCGGCAAGGCAATCGAGGACATCACGCTGCCACCGGGCACCACTATTGGTGCGATCATCCGTGACGAAGAAGTGATGATTGCCCATGACGACACCATGATCGAATCAGGGGACCATGTGATCCTCTTCGTTGTGGATAAAAAGCATATTCGCGATGTGGAGAAGCTGTTCCACGTCGGCTTGAGTTTCTTCTAG	MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGRGSLPTVLRQAGADDADMLVAVTNSDETNMVACQVAYSLFHTPTKIARVRESSYLTREELFDNDHIPVDVLISPEQVVTNYIKRLIEHPGSLQVIDFAEGKAQLVAVKAYYGGPLVGQQLRQIRAHMPNVDTRVAAIFRRDRPITPRGDTVIEADDEVFFIAAKKDIRAVMGELRRIDETNKRIVIAGGGQIGERLAEAIESRYQVKIIEMSPARCRHLSDTLESTVVLQGSASDKDLMLEENIADADIFLALTNDDEANIMSSLLAKRLGAGKVMTIINNPAYVDLVQGGDIDIAISPQLATIGTLLAHVRRGDIVSVHSLRRGAAEAIEAVAHGDSKSSKVVGKAIEDITLPPGTTIGAIIRDEEVMIAHDDTMIESGDHVILFVVDKKHIRDVEKLFHVGLSFF
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0066	CDS	76233	77543	-	sun	sun protein		NP_742236	26986811	1043547			identified by match to PFAM protein family HMM PF01189								Cytoplasmic[Class 3]	biological_process|GO:0000154|rRNA modification|IEA ; molecular_function|GO:0016434|rRNA (cytosine) methyltransferase activity|IEA	TIGR00563|rsmB|ribosomal RNA small subunit methyltransferase B|equivalog|5.1e-136|2.1.1.-|Protein synthesis|tRNA and rRNA base modification	PF01029|NusB, NusB family|1|124|6e-21	COG0144|Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ; COG0144|Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	ATGAACCCACGCCTCGCCGCCGCCCGTGCGCTGGCCGCTGTGCTCAGCGGCAAGGCTTCGCTGAACAGCTCGCTGCCGGCGCAACTGGACAAGGTAGATGAACGCGACCGCGGCCTGACCCAGGACCTGGCGTTCGGTACCGCACGCTGGCAGCCACGCCTCGACCTGCTGGCCGCACAGCTGCTGCAAAAGCCCTTCAAGGCAGCCGATGCCGATGTTCAGGCGCTGCTGCTGGTCGGCCTGTACCAGCTGTTCTACACGCGCATTCCGGCCCATGCCGCCATCGGCGAGACCGTGGGCTGTGCCGACAAACTGAAGAAGCCGTGGGCCAAGGGCCTGCTCAATGCCGTGCTGCGCCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCATGGAGCGCGACCCGGTGGTGCGTACCGCGCACCCGCGCTGGCTGCAGAAGGCGCTGAAAGCCTTCTGGCCAGAGCAGTGGGAGGCCATCTGCGCCGCCAACAATGCCCACCCTCCGATGATTCTGCGGGTCAACCGCCGTCACCATAGCCGCGATGCCTACCTGGCACTGCTGGCCGAAGCCGGCATCGGCGCCAGCGCATGCCAGTACAGCCGGGATGGCATCGTGCTGGCCGAAGCCTGCGACGTGCGCGGCCTGCCAGGCTTCGCCGAAGGCTGGGTGAGCGTGCAGGACGAAGCTGCGCAGCTATCTGCCGACCTGCTGGAACTGGCCCCCGGCCAACGCGTGCTCGATGCTTGCTGCGCACCGGGCGGCAAGACCTGCCACCTGCTGGAGGCCGAGGCTGGCCTGGCGAACATGGTGGCCATCGACCTCGAAGCCAAGCGCCTGACCCGCGTGCGAGAAAACCTCGACCGCCTGCAACTGGACGCCGAGCTGATCGCCTGCGATGCCCGCGACACTGCCAGCTGGTGGGACGGCAAGCCATTCCAGCGCATTCTGCTCGACGCGCCGTGCTCGGCCACCGGCGTGATTCGCCGCCACCCGGACATCAAGATGACCCGCCAAGCCGACGACATCCCGGCTTTGGCCACGCTGCAAGGCGAGCTGCTCGATGCCCTGTGGCCGACCCTGGAAGTGGGCGGCATGCTGCTATACGCCACCTGCTCCACATTGCCGACCGAGAACACTGAAGTGATCAAAGCCTTCCTCGCGCGCACCCCGGGCGCTCGTGAGCTGGACCTGGCGACCGAAGCCGGCCTGCGCCAGCCCCACGGCCGTCAGTTGCTGGCCCAGGAAGGCGGCCACGACGGTTTCTACTATGCCAAGCTGATCAAGATCGCCGCCTCGCGCGGATAA	MNPRLAAARALAAVLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADVQALLLVGLYQLFYTRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRRAQREGEELLAGMERDPVVRTAHPRWLQKALKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLAEAGIGASACQYSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCAPGGKTCHLLEAEAGLANMVAIDLEAKRLTRVRENLDRLQLDAELIACDARDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKMTRQADDIPALATLQGELLDALWPTLEVGGMLLYATCSTLPTENTEVIKAFLARTPGARELDLATEAGLRQPHGRQLLAQEGGHDGFYYAKLIKIAASRG
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0067	CDS	77540	78472	-	fmt	methionyl-tRNA formyltransferase		NP_742237	26986812	1043548			modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation						2.1.2.9		Unknown[Class 3]	biological_process|GO:0006431|methionyl-tRNA aminoacylation|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0004479|methionyl-tRNA formyltransferase activity|IEA	TIGR00460|fmt|methionyl-tRNA formyltransferase|equivalog|5.6e-124|2.1.2.9|Protein synthesis|tRNA aminoacylation	PF02911|Formyl_trans_C, Formyl transferase, C-terminal domain|203|299|2e-26	COG0223|Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ; COG0223|Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].	ATGCGCATCGTCTTTGCAGGCACTCCAGAGTTTGCCGCCGAACACCTCAAGGCCCTGCTCGACAGCCCCTACGAGATCGTGGCCGTCTACACCCAGCCCGACCGCCCGGCCGGCCGTGGCCAGAAGCTGATGCCAAGTGCGGTCAAGGCACTGGCCGTGGCCCATGACATCCCGGTGTTCCAGCCGCAGACCCTGCGCAATGCCGATGCGCAGGCCGAACTGGCCGCACTGAAACCAGACCTGATGGTAGTGGTCGCCTACGGCCTGATCCTGCCGCAGGTGGTGCTGGATATCCCGCGCCTGGGTTGCATCAACAGCCACGCTTCCCTGCTGCCACGCTGGCGCGGTGCCGCGCCGATCCAGCGTGCCGTGGAAGCTGGCGACGCCGAAAGCGGCGTGACCGTGATGCGCATGGAGGCCGGCCTGGACACCGGCCCGATGCTGCTCAAGGTAGTCACCCCGATCAGCGCCGAGGACACCGGCGGCACCTTGCACGATCGCCTGGCCGAAATGGGCCCGCCCGCAGTGGTTCAGGCCATCGCCGGCCTGGCTGACGGTTCGCTGCAAGGCGAAATACAGGACGATGCCCTGGCCACCTACGCGCACAAACTGAACAAGGACGAAGCGCGTATCGACTGGACCCACCCGGCTGTCGAGCTGGAACGCCTGATCCGCGCCTTCAACCCATGGCCGGTGTGTCACAGCACTCTGGATGGTGAAAGCGTCAAGGTGCTGGCCGCCAACCTGTCCACAGGCCAAGGCGCCCCAGGCGAGATACTTTCCGCCAGCAAGGACGGCCTCGTAGTTGCGTGCGGTGACCAAGCCCTGAGCCTGACCCGCCTGCAACTGCCTGGCGGCAAGGCATTGAGCTTCAGTGACCTGTTCAACAGCCGCCGCGAGAAGTTCGCCGCCGGCAAGGTGCTGGGCCAATGA	MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAGRGQKLMPSAVKALAVAHDIPVFQPQTLRNADAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISAEDTGGTLHDRLAEMGPPAVVQAIAGLADGSLQGEIQDDALATYAHKLNKDEARIDWTHPAVELERLIRAFNPWPVCHSTLDGESVKVLAANLSTGQGAPGEILSASKDGLVVACGDQALSLTRLQLPGGKALSFSDLFNSRREKFAAGKVLGQ
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0068	CDS	78533	79039	-	def	peptide deformylase		NP_742238	26986813	1043549			cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins						3.5.1.88		Cytoplasmic[Class 3]	biological_process|GO:0006464|protein modification process|IEA ; molecular_function|GO:0042586|peptide deformylase activity|IEA	TIGR00079|pept_deformyl|peptide deformylase|equivalog|2e-76|3.5.1.88|Protein fate|Protein modification and repair	PF01327|Pep_deformylase, Polypeptide deformylase|3|153|4e-49	COG0242|Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ; COG0242|Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis].	ATGGCCATCTTGAACATTCTCGAATTCCCGGACCCGCGCCTGCGCACCCTCGCCAAACCGGTGACGGAGTTCGACGACGCCCTGCGTCAGCTGATCGACGACATGTTTGAAACCATGTACGAAGCCCCTGGCATCGGCCTGGCCGCTACCCAGGTGAACGTGCACAAGCAGGTTGTGGTCATGGACCTCAGCGAAGACCGCAGCGAACCGCGCGTCTTCATCAACCCGTCGGTCGAAGAGCTCACCCATGACATGGGCCAGTACCAGGAGGGCTGCCTTTCGGTACCGGGCTTCTACGAGAACGTCGACCGTCCGCTGCGTGTCCGGGTCAAGGCCCAGGACCGCGACGGCAAGCCTTTCGAACTGGAATGCGAAGGCCTGCTGGCGGTGTGCGTACAGCACGAATTCGATCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCGCAGCTCAAGCGCGACCGGATCAAGAAGAAGCTGGAAAAGCAGCATCGCCAGCAAGCCTGA	MAILNILEFPDPRLRTLAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVVMDLSEDRSEPRVFINPSVEELTHDMGQYQEGCLSVPGFYENVDRPLRVRVKAQDRDGKPFELECEGLLAVCVQHEFDHLNGKLFVDYLSQLKRDRIKKKLEKQHRQQA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0069	CDS	79246	80343	+		smf protein		NP_742239	26986814	1043550			similar to GP:9945840, GB:L29642, and PID:461402								Unknown[Class 3]	biological_process|GO:0009294|DNA mediated transformation|IEA	TIGR00732|dprA|DNA protecting protein DprA|equivalog|3.2e-104||Cellular processes|DNA transformation	PF02481|SMF, SMF family|80|288|4e-61	COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ; COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	ATGCCCAGTCACCATTCGTCGCCCTGCCCGCCTGCCGAACTGGAGGCACGCTTACGCCTGCATCGCCTCCCCGATGCTGGACTGCGACGCTTTCGAACGTTGCTCGAAGCCTTCGGCAGTGCCTCCTCCGCGCTCAGTGCTCCCGCTTCGGCCTGGCGAGCGTTGGGCATTCCCCAAGCCACCATCGATGCCCGGCGCAGTGCCGAGGTACGCGATGGCGCACTGGCTGCTATGGCTTGGCTGGAGCGCCCTGGCCAGCATTTGCTGATGTGGGACGGCCCAGGCTACCCAGCTTTGCTGGCAGAAATCGACGATGCCCCGCCGCTGCTTTTCGTCGCTGGCGAACCAGCCTTGCTCGATCGTCCTCAGCTGGCCATCGTGGGCAGCAGACGTGCCACACCCCCGGCGCTCGACACCGCCCGGGCATTTTCCCGCTACCTCGCGCAGGCTGGTTTCACCATTACCAGCGGGCTGGCGGTAGGTGTCGACGGTGCCGCTCATCGGGCCGCGTTGCAGGCTGGCGGCGGCACGATTGCCGTGCTCGGTACGGGCTTGCAAAAACTTTATCCACAGCGCCATCGGGACCTTGCGCAGGCGATGATCGACAACGGCAGTGCGCTGGTTTCCGAGTATCCCCTGGATGCCGGGCCGCTGCCTGGCAACTTCCCCCGGCGCAACCGCATCATCAGTGGGCTGTCGCTCGGTGTGCTGGTGGTCGAGGCAAGCCTCGCCAGCGGCTCGCTGATCACGGCGCGTCTGGCGGCGGAACAAGGCCGCGAGGTGTACGCCATTCCGGGCTCCATTCATCACCCGGGGGCCAAGGGCTGCCACCAGCTGATTCGTGATGGGGCGCTGCTGGTGGAAACTGTGGAACAGATCCTGGAAAGCTTGCAGGGTTGGCAGAACCTGCCGCCTGCGGTTGTGGACAAATTCGACCACCCCCTGCTCGCCCTGCTGCATGCCGCACCCCAGACCAGTGAAAGCCTGGCCCACTGCAGCGAGCAGCCGCTGGCCGACGTGCTGGCGCAGTTGACCGAGCTGGAGCTGGAAGGCCGGGTCAGCAATGAAGCCGGGCGTTGGTTTGCCCGCGCGGGCTAA	MPSHHSSPCPPAELEARLRLHRLPDAGLRRFRTLLEAFGSASSALSAPASAWRALGIPQATIDARRSAEVRDGALAAMAWLERPGQHLLMWDGPGYPALLAEIDDAPPLLFVAGEPALLDRPQLAIVGSRRATPPALDTARAFSRYLAQAGFTITSGLAVGVDGAAHRAALQAGGGTIAVLGTGLQKLYPQRHRDLAQAMIDNGSALVSEYPLDAGPLPGNFPRRNRIISGLSLGVLVVEASLASGSLITARLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGALLVETVEQILESLQGWQNLPPAVVDKFDHPLLALLHAAPQTSESLAHCSEQPLADVLAQLTELELEGRVSNEAGRWFARAG
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0070	CDS	80386	80943	+		Sua5/YciO/YrdC/YwlC family protein		NP_742240	26986815	1043551			identified by match to TIGR protein family HMM TIGR00057								Unknown[Class 3]		TIGR00057|TIGR00057|Sua5/YciO/YrdC/YwlC family protein|hypoth_equivalog|6.8e-20||Unknown function|General	PF01300|Sua5_yciO_yrdC, yrdC domain|14|185|1e-30	COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ; COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	ATGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGGTGTATCGCCTGTTGGCGCTGAAGTCGCGTCCTGTGGATAAAGGGCTGATTCTGATCGCTGACAATATCCGTCAGTTCGACTTCCTGTTCGAGGACTTCCCCGAGGACTGGATCGACCGCATGAGCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCTGTTGCCCGAGTGGGTGACCGGGCAGCATGACACGGTGGCGCTGCGGGTCAGTGATCACCCGGTGGTGCGTGAACTGTGCGCACTGGTGGGGCCGCTGATTTCCACCTCGTGCAACCCCGGCGGGCGCCCGGCGGCGAAGACCCGCTTGCGGGTTGAGCAGTACTTCCATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGA	MVSSFRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILIADNIRQFDFLFEDFPEDWIDRMSSTWPGPNTWLVPHQDLLPEWVTGQHDTVALRVSDHPVVRELCALVGPLISTSCNPGGRPAAKTRLRVEQYFHGQLDLVLGGALGGRKNPSVIRDLATGEVVRPG
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0071	CDS	81562	82023	+		hypothetical protein		NP_742241	26986816	1043552											Unknown[Class 3]					GTGATCTTGGCAGTCCATGGCGGCTGTTCGCAGGAGGCTTCGTGCCTGCTGGGTTTTAGATCTCCCACCCGGTTTACCACCCTGCGTACAGCTGCCACCCATTCGTGTGGTAACGGACTGGGTGGGGCCATGAAGCGAGATCTAGTGATGAAGAAGATTGTTCCTGATCCACCCCTACCCTGCACCTCCACCCGCCCCTTCGGCCGCTGCGATGCCGGCCACGATCCACTCTTCACCGTCAACCCAAACATTTCTGCCGAGGACGCTCTGGTCCACGTAGCCCTATACCTGCGCAGCGCTTACGAAACCGGCTACAAAGCTTTGGACTACATGCGTGAAGAAGGCCGTGGCATGTTCTGGTCGAACCTGCATGCGATTGAGATGGCAGAGGGTGTGATCGAGGCGATACTCGATGGCATCGAGTCGACGCCATCGCCGTCACGCCCAGCCTCCAAGGCATAG	MILAVHGGCSQEASCLLGFRSPTRFTTLRTAATHSCGNGLGGAMKRDLVMKKIVPDPPLPCTSTRPFGRCDAGHDPLFTVNPNISAEDALVHVALYLRSAYETGYKALDYMREEGRGMFWSNLHAIEMAEGVIEAILDGIESTPSPSRPASKA
Pseudomonas putida KT2440	NC_002947	Chromosome	PP_0072	CDS	82151	83128	-	qor-1	quinone oxidoreductase		NP_742242	26986817	1043553			identified by match to TIGR protein family HMM TIGR01751								Unknown[Class 3]	biological_process|GO:0008152|metabolic process|IEA ; molecular_function|GO:0016655|oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor|IEA	TIGR02824|quinone_pig3|putative NAD(P)H quinone oxidoreductase, PIG3 family|subfamily|6.2e-22||Unknown function|Enzymes of unknown specificity	PF08240|ADH_N, Alcohol dehydrogenase GroES-like domai