Strain Refseq Accession (Replicon) Replicon Name Locus Tag Feature Type Start Stop Strand Gene Name Product Name Product Name Rating Refseq Accession GI Entrez Alternate Gene Name(s) Alternate Product Names Comments References Genomic Context Homology Structure Features Pathways EC Number PseudoCAP Function Class Subcellular Localization (Localization[Localization Confidence] Gene Ontology Mappings(NameSpace|Accession|Term|Evidence Code) TIGRFAM Predictions Using HMMER (Accession|Name|Function|IsologyType|Significance|EC Number|Role|Sub-role) PFAM Predictions (Accession|Name|Start|Stop|E-value) COG Predictions (Accession|Name[Category])DNA Sequence Protein Sequence Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0001 CDS 82 1566 + chromosomal replication initiator protein DnaA YP_001185508 146305043 5105694 TIGRFAM: chromosomal replication initiator protein DnaA PFAM: Chromosomal replication initiator, DnaA C-terminal domain Cytoplasmic[Class 3] biological_process|GO:0006270|DNA replication initiation|IEA ; biological_process|GO:0006275|regulation of DNA replication|IEA ; molecular_function|GO:0003677|DNA binding|IEA ; molecular_function|GO:0003688|DNA replication origin binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA TIGR00362|DnaA|chromosomal replication initiator protein DnaA|equivalog|3e-284||DNA metabolism|DNA replication, recombination, and repair PF08299|Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain|402|471|3e-27 COG0593|DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. ; COG0593|DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. GTGGAACTATGGCAGCAGTGCGTCGAGCTTCTGCGCGACGAATTGCCGGCTCAGCAATTCAACACCTGGATCCGTCCTCTGCAGGTCGAAGCCGAAGGCGACGAGCTGCGCGTCTACGCGCCCAATCGTTTTGTGCTCGACTGGGTCAACGAAAAGTACCTGAGCCGCCTGCTCGAGTTGCTGGGTGAGCGCGCCGGGGGCCTGGTGCCGGCGCTTTCCTTATTGATAGGCAGCAAGCGAGCGGCTACCGCTCGGGTCGCACCTACCGCGCCCTTGCCTGCCGCAGCGCGTGCGGCGCAGGTTCAGGCAGCCGCCACGGCGAGCAAGCCGGTACCACCGCCCGCCCAGGAAGAACCCTCGCGCGCCAGCTTCGACTCCATGGCCGGCGCCGCGCCGCAGCCACCAACCCCAGCCGTCGCACCGCGTGCCGAGCGCACCGTGCAGGTCGAGGGCGGGCTCAAGCACACCAGTTACCTCAACCGCACCTTCACCTTCGACAATTTCGTCGAGGGCAAGTCCAACCAGTTGGCGCGCGCCGCTGCCTGGCAGGTTGCGGACAATCCCAAGCACGGTTACAACCCGCTGTTCCTTTATGGCGGCGTGGGCCTGGGCAAGACGCACCTGATGCACGCCGTGGGTAACCACCTGCTGGCGAAGAACCCCAACGCCAAGGTGGTGTACCTGCATTCCGAGCGCTTCGTCGCCGACATGGTCAAGGCGCTGCAGCTCAACGCCATCAACGAATTCAAACGCTTCTACCGTTCGGTGGACGCGCTGCTGATCGACGATATCCAGTTCTTCGCCAAGAAAGAGCGTTCCCAGGAAGAGTTCTTCCACACCTTCAACGCCCTGCTCGAAGGCGGCCAACAGGTGATCCTCACCAGCGACCGCTACCCGAAGGAGATCGAAGGCCTGGAAGAGCGCTTGAAGTCTCGTTTCGGCTGGGGCCTGACCGTGGCCGTCGAGCCGCCGGAGCTGGAAACCCGCGTGGCGATCCTGATGAAGAAGGCCGACCAGGCCAAGGTCGAGCTGCCGCACGATGCCGCATTCTTCATTGCCCAGCGCATTCGCTCCAACGTGCGTGAGCTGGAAGGTGCGCTGAAACGGGTGATCGCCCACTCGCACTTCATGGGCCGCGATATCACCATCGAGCTGATCCGCGAATCCCTCAAGGATCTGCTGGCCCTGCAGGACAAGCTGGTCAGCATCGACAATATCCAGCGCACCACGGCCGAGTACTACAAGATCAAGATTTCCGATCTGCTGTCCAAGCGTCGCTCACGCTCCATCGCCCGGCCACGCCAGGTGGCCATGGCATTGTCGAAGGAGCTGACCAACCACAGCCTGCCGGAAATCGGTGTGGCCTTCGGCGGTCGCGATCACACCACGGTATTGCACGCATGCCGTAAGATTGCTGAACTTAGGGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGCACCCTCACTACCTGA MELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRLLELLGERAGGLVPALSLLIGSKRAATARVAPTAPLPAAARAAQVQAAATASKPVPPPAQEEPSRASFDSMAGAAPQPPTPAVAPRAERTVQVEGGLKHTSYLNRTFTFDNFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLAKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSIDNIQRTTAEYYKIKISDLLSKRRSRSIARPRQVAMALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAELRESDADIREDYKNLLRTLTT Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0002 CDS 1601 2704 + DNA polymerase III, beta subunit YP_001185509 146305044 5106313 TIGRFAM: DNA polymerase III, beta subunit PFAM: DNA polymerase III, beta chain 2.7.7.7 Cytoplasmic[Class 3] biological_process|GO:0006260|DNA replication|IEA ; cellular_component|GO:0009360|DNA polymerase III complex|IEA ; molecular_function|GO:0003887|DNA-directed DNA polymerase activity|IEA TIGR00663|dnan|DNA polymerase III, beta subunit|equivalog|2.8e-117|2.7.7.7|DNA metabolism|DNA replication, recombination, and repair PF02768|DNA_pol3_beta_3, DNA polymerase III beta subunit, C-terminal domain|246|366|2e-34 COG0592|DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ; COG0592|DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTCGTGGAACGACGCCAGACGCTGCCGGTGTTGTCCAACGTCCTGCTGGTGGTCGAAGGCCAGCAGCTCTCGCTTACCGGTACCGACCTGGAGGTCGAACTGGTTGGCCGCGTCACCCTCGAAGACGCTGCCGAGCCGGGCGAAATCACCGTACCGGCGCGCAAGCTGATGGATATCTGCAAGAGCCTGCCGAGCGATGCGCTGATCGATATCCGCGTCGATGACCAGAAGCTGCTGGTCAAGGCCGGGCGCAGTCGTTTCACCCTGTCGACGCTGCCGGCCAATGACTTCCCCACCGTCGAGGAAGGTCCGGGTTCGCTGACCTTCAACCTGCCGCAGGCCAAGCTGCGTCGCCTGATCGAACGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGCTACTACCTCAACGGCATGCTGCTGGAGGTGCAAAGCGGCATGCTGCGCGCCGTCGCTACCGACGGTCACCGTCTGGCGATGTGCTCCATGGAGGCGGCCATCCAGCAGGACGGCAAGCATCAGGTGATCGTGCCGCGCAAAGGTATTCTCGAGCTGGCCCGTCTGCTCACCGAGCAGGATGCCGAAGTCGCCATCGTGCTGGGGCAGCACCACATTCGCGCCAACACCGGCGAATTCACCTTCACCTCGAAACTGGTGGACGGCAAGTTCCCGGATTACGAGCGCGTGCTGCCGCGTGGCGGTGACAAGCTGGTGCTGGCCGACCGTCAGGGCCTGCGTGAGGCCTTCAGCCGTACCGCGATCCTGTCCAACGAGAAGTACCGTGGCATTCGTCTGACCCTGGCTGCCGGTCTGCTGAAGATCCAGGCCAACAACCCGGAGCAGGAAGAGGCCGAGGAAGAGATCGTCGTCGACTACGCTGGCGGCGGTCTGGAAATCGGTTTCAACGTCAGCTACCTGCTGGACGTACTGGGCGTGATGGGCACCGAGCAGGTACGCCTGATCCTGTCCGATTCCAACAGCAGTGCCCTGCTGCAGGAAGCCGACAACGATGATTCGGCCTATGTCGTCATGCCGATGAGGCTCTAA MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVTLEDAAEPGEITVPARKLMDICKSLPSDALIDIRVDDQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLTFNLPQAKLRRLIERTSFAMAQQDVRYYLNGMLLEVQSGMLRAVATDGHRLAMCSMEAAIQQDGKHQVIVPRKGILELARLLTEQDAEVAIVLGQHHIRANTGEFTFTSKLVDGKFPDYERVLPRGGDKLVLADRQGLREAFSRTAILSNEKYRGIRLTLAAGLLKIQANNPEQEEAEEEIVVDYAGGGLEIGFNVSYLLDVLGVMGTEQVRLILSDSNSSALLQEADNDDSAYVVMPMRL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0003 CDS 2712 3815 + DNA replication and repair protein RecF YP_001185510 146305045 5106678 TIGRFAM: DNA replication and repair protein RecF PFAM: SMC domain protein Cytoplasmic[Class 3] biological_process|GO:0006260|DNA replication|IEA ; biological_process|GO:0006281|DNA repair|IEA ; biological_process|GO:0006310|DNA recombination|IEA ; biological_process|GO:0009432|SOS response|IEA ; molecular_function|GO:0003697|single-stranded DNA binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA TIGR00611|recf|DNA replication and repair protein RecF|subfamily|1.6e-141||DNA metabolism|DNA replication, recombination, and repair PF02463|SMC_N, RecF/RecN/SMC N terminal domain|2|360|2e-68 COG1195|RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ; COG1195|RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ATGTCCCTGAGCCGCATCATGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCCTCTCCCCCTCCCCCCGCATCAACATCCTTCACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTCGAGGCCATTCATCTGCTCGGCCTCGCCCGCTCCTTCCGCAGCACCCGCCTGCAGCCTGTCATCCATTACGAACAACCGGCCTGCACCGTTTTTGGCCAGGTGCAGTTGGCCGAAGGTGGCTCCAGCAATCTGGGGATTTCGCGTGACCGTCAGGGCGAGCTGCAGATTCGTATCGACGGGCAGAATGCGCGTAGCGCTGCGCAGCTGGCCGATCTGTTGCCTTTGCAGTTGATCAACCCGGACAGCTTTCGCCTGCTGGAAGGCGCACCGAAGATTCGCAGGCAGTTTCTCGATTGGGGGGTGTTCCACGTGGAACATCGTTTTCTCGGCGCCTGGCAACGCCTGCAGAAAGCCCTGCGGCAGCGGAACTCGTGGCTGCGCCATGGTACACTTGACGGTGCTTCGCAGGCCGCATGGGACCGAGAGCTGTGCAGTGCGAGCCAGGAAATCGACACCTACCGTAGAGCCTATATCCAGGCGCTGAAGCCGGTGTTCGAACGCACGTTGGCGGAACTGCTGCAGCTGGAAGGGTTGACCCTGAGCTATTACCGCGGCTGGGACAAGGATCGTGAGCTGAGCGAAGTGCTCGCCTCGTCTCTCCTTCGTGATCAACAGCTCGGGCATACCCAGGCCGGACCGCAGCGCGCCGATCTGCGTCTGCGGCTTGCGGGGCATAACGCGGCGGAAATCCTGTCGCGAGGACAACAGAAACTGGTGGTGTGTGCGTTGCGCATCGCCCAGGGCCACTTGGTCAATGAAGCCAAGCGTGGCCAATGTATCTATCTGGTGGACGATCTACCGTCGGAACTGGATGAGCAGCATCGTCAGGCATTGTGCCGGTTGCTGGAAGATTTGCACTGCCAGGTGTTCATCACCTGTGTGGATCATGAATTGTTGAGGGAAGGCTGGCACACGGATACGCCGGTTGCCATGTTCCACGTGGAACATGGCCGTATCACCCAGACCCAAGACCATCGGGAGTGA MSLSRIMVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSTRLQPVIHYEQPACTVFGQVQLAEGGSSNLGISRDRQGELQIRIDGQNARSAAQLADLLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEHRFLGAWQRLQKALRQRNSWLRHGTLDGASQAAWDRELCSASQEIDTYRRAYIQALKPVFERTLAELLQLEGLTLSYYRGWDKDRELSEVLASSLLRDQQLGHTQAGPQRADLRLRLAGHNAAEILSRGQQKLVVCALRIAQGHLVNEAKRGQCIYLVDDLPSELDEQHRQALCRLLEDLHCQVFITCVDHELLREGWHTDTPVAMFHVEHGRITQTQDHRE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0004 CDS 3820 6240 + DNA gyrase, B subunit YP_001185511 146305046 5106679 TIGRFAM: DNA gyrase, B subunit PFAM: DNA gyrase, subunit B domain protein 5.99.1.3 Unknown[Class 3] biological_process|GO:0006265|DNA topological change|IEA ; cellular_component|GO:0009330|DNA topoisomerase complex (ATP-hydrolyzing)|IEA ; molecular_function|GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity|IEA TIGR01059|gyrB|DNA gyrase, B subunit|equivalog|0|5.99.1.3|DNA metabolism|DNA replication, recombination, and repair PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|34|142|1e-12 COG0187|GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ; COG0187|GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ATGAGCGAGAATCAAACGTACGACTCCTCCAGCATCAAGGTGCTGAAAGGACTGGACGCCGTACGCAAACGTCCCGGGATGTACATCGGTGACACTGACGATGGCAGTGGTCTGCACCACATGGTGTTCGAGGTGGTCGATAACTCCATCGACGAAGCGCTGGCCGGCTATTGCAGCGAGATCGTCATCACCATTCACCCTGACGAATCGATCAGCGTACGTGACAACGGTCGCGGCATTCCGGTGGACATCCACAAGGAAGAAGGCGTTTCCGCGGCCGAGGTCATCATGACCGTGCTGCACGCCGGCGGTAAGTTCGATGACAACACCTACAAGGTGTCCGGCGGTCTGCACGGCGTGGGTGTATCGGTGGTGAACGCGCTGTCCGAAGAGCTGCGCCTGACCATCCGCCGCGCTGGCAAGGTGTGGGAGCAGATCTATCACCACGGCGTGCCGCAAGCGCCGCTGGCTACTGTCGGCGACACCGATGGCACTGGTACCGAGATTCACTTCAAGGCATCTGCCGAGACCTTCAGCAACATCCATTTCAGCTGGGATATCCTGGCCAAGCGCCTGCGCGAGCTGTCGTTCCTCAACTCCGGCGTGGGCATCCTGCTGCGTGACGAGCGTTCCGGCAAGGAAGAGCTGTTCAAGTACGAAGGCGGTCTGAAGGCCTTCGTCGAGTACCTCAACACCAACAAGAACGTGGTGAACCAGGTATTCCACTTCAACATCCAGCGCGAGGAAGATGGTGTTGGCGTGGAAGTGGCCCTGCAGTGGAACGACAGCTTCAACGAGAACATCCTCTGCTTCACCAACAACATTCCGCAGCGTGACGGTGGTACCCACCTGGCAGGCTTCCGCTCTGCCCTCACCCGCCACCTGAACAACTACATCGAGCAGGAAGGTCTGGCGAAGAAGTTCAAGGTCGCCACCACTGGCGATGACGCCCGTGAAGGCCTGACCGCAATCATCTCGGTCAAGGTGCCGGACCCGAAATTCAGCTCGCAGACCAAGGACAAGCTGGTTTCCAGCGAGGTGAAAACCGCTGTCGAGCAGGAGATGGGCAAGTACTTTGCCGACTTCCTGCTGGAGAATCCCAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGTGAAGCGGCGCGGAAGGCGCGTGAAATGACCCGCCGCAAGGGCGCTCTGGACATTGCCGGTCTGCCCGGCAAACTGGCCGACTGTCAGGAAAAAGACCCGGCGCTGTCCGAACTCTACATCGTGGAGGGTGACTCCGCGGGCGGTTCTGCCAAGCAGGGCCGTAACCGCAAGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAGAAGGCGCGCTTCGACAAGATGCTCTCCTCTGCCGAAGTCGGTACCCTGATCACCGCACTGGGCTGCGGTATCGGACGCGAGGAGTACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGATGCTGACGTTGACGGTTCGCACATCCGTACTCTGCTGCTGACCTTCTTCTTCCGTCAGCTGCCGGAGCTGATCGAGCGTGGCTACGTCTACATCGCCCAGCCGCCGCTGTACAAGGTCAAGAAGGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGACGAATACATGACCCAGTCGGCCCTGGAAGACGCCAGCCTGCACGTCAACGAGAACGCTCCTGGCCTGTCCGGCGGTGCTCTGGAGAAGCTGGTTGGTGAATACCGCGGCGTGATGAAGACCCTGGACCGCCTGTCGCGCGTGTATCCGAAGGAAATCACCGAGCACTTCGTCTACCTGCCGCGCATCGGCCTTGAACAGCTAGCTGATCATGCCGGCATGCAGGCCTGGCTGGAGCAGTTCAGCGCCCGTCTGAAGACGATGGAAAAGTCCGGCCAGACCTACACTGCCAGCCTGCGCGAAGACCGCGAGCGCCATGTCTGGCTGCCTGAGGTAGAGGTCAAGGCGCATGGTCTGTCCAGCTACACCACCTTCAACCGCGACTTCTTCGCCAGCAATGACTACAAGACAGTCACGGCCCTGGGCGACCAGCTGAACAACCTGCTGGAAGACAGCGCCTACGTACAGCGCGGCGAACGCAAGAAGCCGGTGGCGACCTTCAAGGAAGCGCTGGACTGGCTGATGGCCGAGAGCACCAAGCGCCACAGTATCCAGCGCTATAAGGGTCTCGGCGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGATCCGGAAGTGCGACGCATGCTCAAGGTGACCATCGAAGACGCCATCGCGGCGGACCAGATCTTCAACACCCTGATGGGCGACGCCGTGGAGCCGCGCCGCGACTTCATCGAGTCCAATGCCCTGGCGGTGTCGAATCTGGACTTCTGA MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCSEIVITIHPDESISVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSVVNALSEELRLTIRRAGKVWEQIYHHGVPQAPLATVGDTDGTGTEIHFKASAETFSNIHFSWDILAKRLRELSFLNSGVGILLRDERSGKEELFKYEGGLKAFVEYLNTNKNVVNQVFHFNIQREEDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRHLNNYIEQEGLAKKFKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKKGKQEQYIKDDEAMDEYMTQSALEDASLHVNENAPGLSGGALEKLVGEYRGVMKTLDRLSRVYPKEITEHFVYLPRIGLEQLADHAGMQAWLEQFSARLKTMEKSGQTYTASLREDRERHVWLPEVEVKAHGLSSYTTFNRDFFASNDYKTVTALGDQLNNLLEDSAYVQRGERKKPVATFKEALDWLMAESTKRHSIQRYKGLGEMNPDQLWETTMDPEVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALAVSNLDF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0005 CDS 6506 7438 - phosphatidate cytidylyltransferase YP_001185512 146305047 5106680 PFAM: phosphatidate cytidylyltransferase Cytoplasmic Membrane[Class 3] PF01148|CTP_transf_1, Cytidylyltransferase family|43|308|7e-37 COG4589|COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]. ; COG4589|COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]. ATGGATCGCAATACCCTGCTGCTGTTCGCCGGTATCGGTGCCCTGCTCCTGCTGGCCAGCCTGGTCGGTTTCGTCCTCAAGCGGCGCAGTGGCGATCAACCCAACCCGGTGATCGACAACCTCAACGCGCGGATCAATGCCTGGTGGGTGATGGTGCTGGTGATCGGCATCGCCTTCCTGTTCGGCAACATCGGCGTCGTGGTGCTGTTCTACTTCGTCTCCTTCTACGCCCTGCGCGAGTTCATGACCCTGACGCCAACCCGGCGCAGCGACTATCCGGCGCTGGTGGCGGCCTTCTATTTCGCCCTGCCGATGCAGTACCTGCTGATCGCCCTGGACTGGTACGGCCTGTTCGCCATCTTCATCCCGGTCTACCTGTTCCTGCTGCTGCCGATCCTTGCCTCGCTGGGCGGCGACACCACGCGTTATCTGGAGCGCGCGGCCAAGGCGCAATGGGGCTTGATGATCGCGGTGTACTGCATCTCCTCGGTACCGGCCCTGCTGACCCTGGACATTCCCGGCTACGAGGGGCGCAACCTGCTGCTGATCGCCTGGCTGATCATCGTCGTGCAGCTCTCCGACGTGCTGCAGTACGTGTGCGGCAAGCTGTTCGGCAAGCACAAGATCGCCCCCAGCCTGTCGCCCTCGAAGACCGTGGAAGGCTTCGTCGGCGGCGTCGCCCTGGCCACGCTGATTGGCGGCCTGCTGTGCTGGATTACTCCCTTCGCCTTCTGGCAGGCGGCACTCTTTGCCCTGCTGGTATGCCTGCTCGGCTTCGCCGGTGGCCTGGTGATGTCGGCGATCAAGCGCGACCGCGGGGTGAAGGACTGGGGCCATATGATCGAAGGCCATGGCGGCATGCTCGACCGCCTGGACTCCGTATGTTTCGCCGCACCGGTGTTCTTCCATATGGTGCGTTACTGGTGGGCCTAG MDRNTLLLFAGIGALLLLASLVGFVLKRRSGDQPNPVIDNLNARINAWWVMVLVIGIAFLFGNIGVVVLFYFVSFYALREFMTLTPTRRSDYPALVAAFYFALPMQYLLIALDWYGLFAIFIPVYLFLLLPILASLGGDTTRYLERAAKAQWGLMIAVYCISSVPALLTLDIPGYEGRNLLLIAWLIIVVQLSDVLQYVCGKLFGKHKIAPSLSPSKTVEGFVGGVALATLIGGLLCWITPFAFWQAALFALLVCLLGFAGGLVMSAIKRDRGVKDWGHMIEGHGGMLDRLDSVCFAAPVFFHMVRYWWA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0006 CDS 7440 8063 - phospholipid/glycerol acyltransferase YP_001185513 146305048 5106681 PFAM: phospholipid/glycerol acyltransferase Unknown[Class 3] TIGR00530|AGP_acyltrn|1-acylglycerol-3-phosphate O-acyltransferases|subfamily_domain|2.4e-08|2.3.1.51|Fatty acid and phospholipid metabolism|Biosynthesis PF01553|Acyltransferase, Acyltransferase|35|153|2e-15 COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ; COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ATGCTCGCCGCATTGACCGCTTTCGCCATCACCTCGGCAGCTCGCCTGCTGACCGGTGCCCGCGCCCTGTGGCTCGGCAGCACCGCGCAGGCGACGCAGCGCCTGTACTACGCCAATCACAGCAGCCATGGCGACTTCGTCCTGCTCTGGGCGTCGCTGCCGCCGGAGTTGCGCAAGCGCACCCGGCCAGTGGCCGGCGCCGACTACTGGCAGAAGCCGGGCGTGCGCAGCTTCCTGATCAATAACGTGTTCAACGGTGTGCTGGTCGACCGCGAACGCAAGGAGGCAGGCGTCAACCCGCTACAGGCGATGCTCGATGCGCTGGACGGCGGCGACTCGCTGATCATCTTCCCCGAAGGCACGCGCAACCTCGGCGACGAGCCGCTGTTGCCGTTCAAGAGCGGCCTCTATCACCTGGCCCAGGCACGTCCGGAAGTGGAGCTGGTGCCAGTGTGGATCGCCAACCTGAATCGGGTGATGCCCAAGGGCCGCGCACTACCGCTGCCCCTGCTATGCACCCTGAGCTTCGGCGCTGCGCTGGAGCGTATCGAGGGGGAGGGCAAGGAGGCCTTCCTGGAACGCGCACGTAACGCCCTGCTGGCACTGGCACCCGAGGAGGCCTGA MLAALTAFAITSAARLLTGARALWLGSTAQATQRLYYANHSSHGDFVLLWASLPPELRKRTRPVAGADYWQKPGVRSFLINNVFNGVLVDRERKEAGVNPLQAMLDALDGGDSLIIFPEGTRNLGDEPLLPFKSGLYHLAQARPEVELVPVWIANLNRVMPKGRALPLPLLCTLSFGAALERIEGEGKEAFLERARNALLALAPEEA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0007 CDS 8073 8507 - hypothetical protein YP_001185514 146305049 5106682 Cytoplasmic Membrane[Class 3] ATGCAGGCTGATCTGCTGCTGGTCGCCGCGCTGCTACGACGCGGGCGCAGCCTCGACCATTTTTCCAGCGCGCTGAGTTTGGTTGCCGTGATCTTCGGCCTGGCGCCATGGCTGGGTGCACCGCCAAGCCTGATGCTGGCGCTGCTCTGCGCAGCGCTGCTGATCCTCGGCCTGGCCGAGAAGTACTGGGCGCTGCGCGTGGCGCTGGATGCCGAACTGTTCCAGCGTCTGGCGGAGGCGGGCGAACAGCTCGACGGCCAGACTCATGCGCTGGATCAGGCGCGGCAGAAGCTGGGGCTGCAGAATGCGCAGCTGGCTGGCCGCGACTGGAGCCTGCGCGCTCAGGGTGCGCTCGGCCTGCTACGTAAACAGGCGCTGTGCCTGCTGCTACAGAGCGTCATCGTCGTACTCGGATTCTTCATCGTCTTCGCTTAA MQADLLLVAALLRRGRSLDHFSSALSLVAVIFGLAPWLGAPPSLMLALLCAALLILGLAEKYWALRVALDAELFQRLAEAGEQLDGQTHALDQARQKLGLQNAQLAGRDWSLRAQGALGLLRKQALCLLLQSVIVVLGFFIVFA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0008 CDS 8497 9834 - dual specificity protein phosphatase YP_001185515 146305050 5106683 PFAM: phosphoesterase, PA-phosphatase related Cytoplasmic Membrane[Class 3] PF00782|DSPc, Dual specificity phosphatase, catalytic domain|304|430|6e-09 COG2453|CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]. ; COG2453|CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]. ATGGACAACACGCGCGAACAGGGATTGTGGAAGCGCGGCGTACTCTGGCTGCTGTTGCTCGGCCCGCTGTTCTTCGCCAGCTACGGCTTCGCCAACTGGCTGACCGGGCAGCGCGATGATGTCGGCAGCCTGGTCTTCGCCTGGGAACCACAGATCCCGCTGTGGCCCTGGACCATCGTGCCGTACTGGTCGATCGACCTGCTCTATGGCCTGTCCTTCCTGTTGCCGGCCTGCCGCCGCGAGATGGATCGCCACGCCCTGCGCCTGCTCGCCGCGCAGGTGATCTGCGTCGCCTGCTTCCTGCTCTGGCCGCTGCGCTTCACCTTCGAGCGGCCGCCGCTGGACGGCGCCTTCGGCCTGATGTTCGACGTGCTGATGGGCTTCGACAAACCCTTCAACCAGGCGCCGTCGCTGCATATCACCCTGCTGGTAATCATCTGGGCGATGTTCGCCAATCACACCCGCGGCCCGTTCTGGCGTGGCCTGCTGCACGGGTGGATGGCGCTGATCGGCATCTCCGTGCTGACCACCTGGCAGCATCACTTCATCGACCTGCCCACCGGGGCGCTGGCGGGCTTCTTCTGCCTGTGGCTGCTGCCGCTGCAGGGCGCTACGCCGCTTACGCAGATGCGCCTCACCAGCGATCCACGGCGTTGGCGCCTGGCGCTGCGCTATGGGCTTGGCGCAACGCTGAGCGCCGTGCTGGCCGTCAAGCTGGGCGGTGCCTGGCTATGGCTGTTCTGGCCAACCGTTGCCCTGGCCATGGTCGCGCTCAACTACCTGTTGTTCGACGCTGCCGGCTTCCAGAAGCAAGCCAACGGCCGCCTCAGCCCGGCCGCGACAGCGTTGCTCGCGCCCTATCTGCTCGGTGCCTGGATCAACTCGCGGCTATGGACCTATCGCCAGCCAATGCCGAGTCAGGTGGTGGAGGGCATCCATCTTGGCCGCCTGCCCGCCACGGGCGAACTCGGTAGCTATGCCGCCATGGTCGACCTGTGCGCCGAACTGCCGCTGCTGCGCACACCTAGCGCCTACTGCAGTCTGCCGTCACTGGACCTGGTGACGCCGGATGCGCTGACCTGCCAACGCGCCGCCGAGGCCATCGAACGTCTGCGCCACGAGGGCCCGCTGCTGGTGTGCTGCGCCCTGGGCTATTCGCGCAGTGCCACAGCCGTGGCCGCCTGGCTGCTGCACAGCGGCCGCTGCCAGAGCGTGGATGCGGCCGTGGCGCTGATCCGCCAGGCGCGGCCACAGGTCGTGCTTGGCCCGCAGCACCTGGCCGCACTGCAGGGCATGCTCGTTGCCAGCCCGGCCCTGGAGGTCGCACATGCAGGCTGA MDNTREQGLWKRGVLWLLLLGPLFFASYGFANWLTGQRDDVGSLVFAWEPQIPLWPWTIVPYWSIDLLYGLSFLLPACRREMDRHALRLLAAQVICVACFLLWPLRFTFERPPLDGAFGLMFDVLMGFDKPFNQAPSLHITLLVIIWAMFANHTRGPFWRGLLHGWMALIGISVLTTWQHHFIDLPTGALAGFFCLWLLPLQGATPLTQMRLTSDPRRWRLALRYGLGATLSAVLAVKLGGAWLWLFWPTVALAMVALNYLLFDAAGFQKQANGRLSPAATALLAPYLLGAWINSRLWTYRQPMPSQVVEGIHLGRLPATGELGSYAAMVDLCAELPLLRTPSAYCSLPSLDLVTPDALTCQRAAEAIERLRHEGPLLVCCALGYSRSATAVAAWLLHSGRCQSVDAAVALIRQARPQVVLGPQHLAALQGMLVASPALEVAHAG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0009 CDS 9834 11588 - alpha/beta hydrolase fold YP_001185516 146305051 5106684 PFAM: alpha/beta hydrolase fold Cytoplasmic[Class 3] PF00561|Abhydrolase_1, alpha/beta hydrolase fold|60|266|1e-08 COG2267|PldB, Lysophospholipase [Lipid metabolism]. ; COG2267|PldB, Lysophospholipase [Lipid metabolism]. ATGCGCCCCGTACAACTGCATACCTTCACCACCCATGACGGCGTCGAACTGAGCTATTGCCACTGGCCGGCAACCGTGCCGGCGGACGGCTCACGTCAGGCCGTGGTGCTGTTTCATCGTGGCCACGAGCACGGCGGGCGCATGGCTCACCTAGTGGACGAGCTGGAGCTGCCGCACTGCGATTTCTTCGCCTGGGACGCCCGCGGCCATGGCCTGTCGCCCGGTGCGCGCGGCGACAGCCCGAGCTTCGCCACCAGCGTGCGCGACGTGCAGACCTTTATCGAGCATATCGGCAGCGCACACGGCATCGCCGAAGAGGACCTGTCGGTGGTGGCGCAAAGCGTCGGCGCGGTGATCGTCTCCACCTGGGCCCATGACTACGCGCCGAAGGTGCGCTGCCTGGTGCTCGCCTCGCCGGCGTTCAAGGTCAAACTCTACGTGCCCTTCGCCCGGCCCGGGCTGAAGCTGCTGCACGCCTGGCGCGGCAACTTCTTCGTCAACAGCTACGTGAAGGCGAGGTTCCTCAGCCACGATCCCGAGCGCATCGCCTCCTTCGAGAACGACTCGCTGATCGCCCGGCCGATCTCGGTGACCATGCTGCTCGGCCTGTACGAGGCCGCCGAGCGCGTCGTCGCCGACGCCCAGGCGATCCAGGTGCCGACCCAGCTGCTGATCTCCGGCGCCGACTTCGTCGTCCACCGCAAACCGCAGGAGGACTTCTTCGAGCGTCTCGGCAGCCTGCGCAAGGAAAAACACCTGCTGCCCGGCTTCTTCCACGACACCCTTGGCGAGCGCGACCGCGCCCATGCCCTGAGCCGCGCGCGGCGCTTTATCCTGCGCAACTTCGAGGAGCCGGTGACGCGCCCCTCGCTGCTCGATGCCGATCGCCTGGGCGCCACCTGCGCCGAAGCCGAAGCGCTGGCCGCGCCGCTGCCAAGGAACTCGCTGCGCGACCTCTACTGGCGTGCCACCCGTGCCGGCATGCGCCTGGGCAGTACGCTGTCGGCCGGAGTGAAGCTGGGCTTCGACACCGGCTTCGATTCTGGCAGCACCCTCGATTACGTCTACCGCAACCAGCCCACCGGCAAGGGCGCGCTGGGCCGCCTGATCGATGCGAACTACCTGGATTCCATCGGCTGGCGCGGCATCCGCCAGCGCAAGCTGCACGCCGAGGAACTGCTGCGCCTGGCCATGACCAGGCTGCGTGAGACGGGCAGGGCGGTGCGCATCGTCGATATCGCCGCCGGCCACGGCCGCTACATCCTCGAATCGCTGGAAGGCCAGCAGCAGCGCCCAGATTCGATCCTGCTGCGCGACTACAGCGACATCAACGTGCGTGACGGCAATGCCCTGATCGAGCAGAAGGGCCTGGCCGACATCGCCCGCTTCGTCAAAGGCGATGCCTTCGACCGTGAGGATCTCGCTGCGCTGGAGCCGAAACCGACCCTGGCAGTGGTCTCCGGCCTGTACGAGCTGTTCGGCAGCAACCAGATGGTCGGCGACTCGCTGGCCGGGCTGGCGGCGGCGGTGGAGGAGGGTGGTTATCTGGTCTACACCGGCCAGCCCTGGCACCCGCAGCTGGAGCTGATCGCCCGCGCCCTGACCAGCCACCGCGACGGCCAGGCCTGGGTCATGCGCCGGCGCAGCCAGGCGGAGATGGATCAGCTGGTGGAAGCGGCGGGCTTTCGCAAGGTGGCGCAGCGCATCGACCAGTGGGGCATCTTCAGCGTATCCCTGGCGCAGCGGGTGAAGTGA MRPVQLHTFTTHDGVELSYCHWPATVPADGSRQAVVLFHRGHEHGGRMAHLVDELELPHCDFFAWDARGHGLSPGARGDSPSFATSVRDVQTFIEHIGSAHGIAEEDLSVVAQSVGAVIVSTWAHDYAPKVRCLVLASPAFKVKLYVPFARPGLKLLHAWRGNFFVNSYVKARFLSHDPERIASFENDSLIARPISVTMLLGLYEAAERVVADAQAIQVPTQLLISGADFVVHRKPQEDFFERLGSLRKEKHLLPGFFHDTLGERDRAHALSRARRFILRNFEEPVTRPSLLDADRLGATCAEAEALAAPLPRNSLRDLYWRATRAGMRLGSTLSAGVKLGFDTGFDSGSTLDYVYRNQPTGKGALGRLIDANYLDSIGWRGIRQRKLHAEELLRLAMTRLRETGRAVRIVDIAAGHGRYILESLEGQQQRPDSILLRDYSDINVRDGNALIEQKGLADIARFVKGDAFDREDLAALEPKPTLAVVSGLYELFGSNQMVGDSLAGLAAAVEEGGYLVYTGQPWHPQLELIARALTSHRDGQAWVMRRRSQAEMDQLVEAAGFRKVAQRIDQWGIFSVSLAQRVK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0010 CDS 11614 12219 - CDP-alcohol phosphatidyltransferase YP_001185517 146305052 5106685 PFAM: CDP-alcohol phosphatidyltransferase Cytoplasmic Membrane[Class 3] PF01066|CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase|64|197|4e-05 COG0558|PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]. ; COG0558|PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]. ATGCCTTCGATCTACCAGCTCAAACCCGCCTTCCAGAACCTGCTGCGCCCCGGCGTCGAACGTCTTTACGCGCGCGGCGTCACCGCCAACCAGGTGACCCTGGCCGCCGCCCTCATCTCCGTGCTGCTCGGCGTTCTACTCGCAGCCTTCAGCCATGTCGTCTGGCTGTTCGCCTTGATCCCCCTGTGGATGCTGCTGCGCATGGCGCTCAATGCCGTCGACGGCATGCTCGCGCGCGAGTTCGGCCAGCAGTCGAAGCTCGGCGCCTACCTCAACGAGCTGTGCGACGTAGTTGCCGACAGTGCGCTGTATCTGCCTTTCGCCCTGCTGCCCGGCGTCTCGCCGCTACTGGTGGTGACCGTGGTGCTACTGGCGGTGATCAGCGAGTACGCCGGCGTGCTCGGGCCCATGATCGGCGCCTCCCGCCGCTATGACGGGCCCATGGGCAAGAGCGACCGCGCCTTCTGCTTCGGCGTGCTCGGTGCCGGCGTCGCCACGGGCCTGCTGCCTGCCTTGTGGATCAACCTGCTGCTGGCGCTGATCCTGGTCTTGCTGCTCTACACGCTCTACAACCGCGTTCGCCAGGGGTTGGCCGAAGCGGCCTGA MPSIYQLKPAFQNLLRPGVERLYARGVTANQVTLAAALISVLLGVLLAAFSHVVWLFALIPLWMLLRMALNAVDGMLAREFGQQSKLGAYLNELCDVVADSALYLPFALLPGVSPLLVVTVVLLAVISEYAGVLGPMIGASRRYDGPMGKSDRAFCFGVLGAGVATGLLPALWINLLLALILVLLLYTLYNRVRQGLAEAA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0011 CDS 12430 13197 - phospholipid/glycerol acyltransferase YP_001185518 146305053 5106686 PFAM: phospholipid/glycerol acyltransferase Cytoplasmic Membrane[Class 3] TIGR00530|AGP_acyltrn|1-acylglycerol-3-phosphate O-acyltransferases|subfamily_domain|4.5e-26|2.3.1.51|Fatty acid and phospholipid metabolism|Biosynthesis PF01553|Acyltransferase, Acyltransferase|62|186|2e-23 COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ; COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ATGGCGATATTGCAGGCTCTCAGAATCACGCTTTTCTACCTGCTGCTGTCGTCCAGTTCGTTCTTCTGGTGCCTGATCAGCCTGGTGGTCGCGCCCTTTTTGCCGTTCCGCCAACGCTACCGTTTCGTCGTTCAGGCCTGGTGCAGCTGCGCCGTGTGGCTGGCGAGAGTGATCGTCGGCATTCGCTACGAAGTGCGCGGCCTGGAGAACATCCCCGAACGTCCCTGCGTGATCCTCGCCAACCACCAGAGCACCTGGGAAACCTTCTTTCTTTCCTCCTACTTCGAACCCCTCAGCCAGGTGGTCAAGCGCGAACTGCTGCGCGTGCCGTTCTTCGGCTGGGGCATGGCGCTGCTCAAGCCCATCGCCATCGACCGCAGCAACCCCAAGGCGGCGCTCAAGCAACTGGCCAAGCAGGGCGAAGAGCGCCTCAAACAGGGCGCCTGGGTGCTGGTGTTCCCCGAAGGCACGCGCATTCCTCCTGGACAGATCGGCAAGTTCTCCCGCGGCGGTACGTCCCTGGCGGTGAATGCCGGCCTGCCGGTACTGCCCATCGCGCACAATGCCGGTGAATTCTGGCCCAAGGCAGGCTGGGGCAAACGCCCGGGTACCATCCAGGTGATCATCGGCCAGCCAATGTACGCCGAGGGTGAAGGCCCGCGCGCCATCGCCGAACTCAACGAGCGCGCCTTCCAGTGGGTGTGCCGACAGCAGACCGAACTGCGTGGCGAGGAGCCGCAGCTCAGCCGTCTGAGCGAGCCGGTCTGA MAILQALRITLFYLLLSSSSFFWCLISLVVAPFLPFRQRYRFVVQAWCSCAVWLARVIVGIRYEVRGLENIPERPCVILANHQSTWETFFLSSYFEPLSQVVKRELLRVPFFGWGMALLKPIAIDRSNPKAALKQLAKQGEERLKQGAWVLVFPEGTRIPPGQIGKFSRGGTSLAVNAGLPVLPIAHNAGEFWPKAGWGKRPGTIQVIIGQPMYAEGEGPRAIAELNERAFQWVCRQQTELRGEEPQLSRLSEPV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0012 CDS 13211 13741 - histidinol-phosphate phosphatase family protein YP_001185519 146305054 5106687 TIGRFAM: histidinol-phosphate phosphatase family protein Unknown[Class 3] TIGR01656|Histidinol-ppas|histidinol-phosphate phosphatase family domain|subfamily_domain|1.3e-49||No Data|No Data PF08645|PNK3P, Polynucleotide kinase 3 phosphatase|2|129|1e-05 COG0241|HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ; COG0241|HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ATGAAACTGCTGATCCTCGACCGCGACGGTGTCATCAATGAAGACTCCGACGCCTACATCAAGACGCTCGACGAGTGGATTCCGATTGCCTCGTCGATCACCGCCATCGCGCGCCTGTCGCAAGCGGGCTGGACGGTGGCCGTGGCCACCAACCAGTCCGGCATCGCCCGTGGCTATTACGACCTGGCGACCCTGGAGTCGATGCACGCGCGCCTGCGCGAGCTGGTGGGCGAGCAGGGCGGCGAAGTCGGGCTGATCGTCTACTGCCCGCACGGGCCGGACGATGGCTGCGAGTGCCGCAAGCCCAAGGCGGGCATGCTCAGGCAGATTGCCGCGCACTACGGCACGGATCTGGCAGGAATCTGGTTCGTCGGCGACAGCAGCGGTGACCTGCAGGCCGCACTGGCCGTCGATTGTCAGCCCGTTCTGGTAAAGACTGGCAAGGGCGAACGTACCCTGGCCAAGCCGTTACCGCCGGGAACTCTGGTATTCGATGATCTGGCGGCGGTCGCCGATCAACTGCTCTCATAA MKLLILDRDGVINEDSDAYIKTLDEWIPIASSITAIARLSQAGWTVAVATNQSGIARGYYDLATLESMHARLRELVGEQGGEVGLIVYCPHGPDDGCECRKPKAGMLRQIAAHYGTDLAGIWFVGDSSGDLQAALAVDCQPVLVKTGKGERTLAKPLPPGTLVFDDLAAVADQLLS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0013 CDS 13811 15865 - Glycine--tRNA ligase YP_001185520 146305055 5106688 6.1.1.14 Cytoplasmic[Class 3] biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA TIGR00211|glyS|glycyl-tRNA synthetase, beta subunit|equivalog_domain|1.2e-230|6.1.1.14|Protein synthesis|tRNA aminoacylation PF05746|DALR_1, DALR anticodon binding domain|577|671|1e-05 COG0751|GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ; COG0751|GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ATGAGTGCGAAAGATTTCCTGGTCGAACTGGGCACCGAAGAGCTGCCACCGAAAGCCCTGAAAAGCCTCGGTGATGCCTTCCTCGCCGGTATCGAGAAAGGCCTCAAGGCCGCCGGCCTGAACTACGCCGCCAGCCGCGTATATGCGGCGCCGCGGCGCCTGGCGGTGCTGGTGGAGCAGCTGGAAGAGCAGCAGGCCGACCGCAGCATGAACCTCGACGGTCCGCCCATCCAGGCCGCCTTCGATGCCGACGGCAACCCGACCCAGGCCGCCCTGGGCTTTGCCCGCAAATGCGGCGTGGACATCGCCGAGATCGACCGCAGCGGCGCGAAACTGCGTTTCGCCCAGCACATCCCCGGCCAGCCGGCGGTGAACCTGCTGCCGACCATCGTGCAGGACTCGCTGAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGCCGCCCGTCGCGACGAGTTCGTGCGTCCGACCCAGTGGCTGGTGATGCTGTTCGGCGACGCCGTGGTCGACTGCGAGATCCTCGCGCAGAAGGCCGGTCGCGTGTCCCGTGGCCATCGCTTCCACGCCAACCGCGAAGTGCGCATCAGCAGCCCGGCGAACTACGCCGAAGACCTGCGCAGCGCCTATGTGCTGGCCGACTTCGCCGAGCGCCGCGAGATCATCAGCCGCCGCGTCGACGAGCTGGCCGCCGCCGAGCAGGGCACGGCCATCGTACCCCCGGCGCTGCTGGACGAAGTGACCGCCCTGGTGGAATGGCCGGTGCCGCTGGTCTGCTCCTTCGAGGAGCGCTTCCTCGAGGTGCCGCAGGAGGCGCTGATCAGCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTCGATGCGGGCGGCAAGCTGCTGCCGCGCTTTATCACCGTGGCGAACATCGAAAGCAAGGACCCGGCGCAGATCGTCTCGGGCAACGAGAAAGTCGTGCGTCCGCGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGAAGCAGAAGCTCGAAGGCTTCAACCAGCGCCTGGCCAACGTGGTGTTCCAGGCCCAGCTCGGCTCGGTGTTCGACAAGGCCCAGCGGGTATCGGCGCTGGCCGGTTTCATCGCCCGCGAAGTCGGCGGCGACGAGGCCCGCGCCGCCCGTGCCGGCCTGCTGTCCAAGTGCGACCTGGCCACCGAGATGGTCGGCGAATTCCCCGAGATGCAGGGCATCGCCGGCTACTACTACGCGCTCAACGACGGTGAGCCGCAGGACGTCGCCCTGGCCCTGAACGAGCAGTACATGCCGCGCGGTGCCGGCGCCGAATTGCCGAGCACCCTGACCGGTGCCGCCGTGGCCGTGGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCGACCGGCTCGAAGGACCCCTACGCCCTGCGTCGCGCCGCCCTCGGCGTGCTGCGCATCCTGATCGAGAAGGGCCTGGATCTGGACCTGGCCGCCGCGGTCGACTTCGCCGTCGCCCAGTACGCCGGCAAGGTCAAGAGCGACGGCCTGGCCGCCCAGGTGCTGGAGTTCATCTTCGACCGCCTGCGTGCACGCTACGAAGACGAAGGTATCGAAGTGGCCGTGTACCAGGCCGTGCGCGCGGTCAATCCGACCTCGCCGCTGGACTTCGACCAGCGCGTGCAGGCCGTGCAGGCCTTCCGCAAGCTGCCGCAGGCCGAGGCCCTGGCCGCTGCCAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGTGGCGTCGCCGCCCAGGTCGAGGCGCACTACTTCGACAACCCCAGCGAGTTCGCCCTGCACGCCGCCATCCAGCAGGCAGACCAGGCCGTACAGCCGCTGGCCGCCGCCCGCCAGTACAACGAGGCCCTGGCCAAGCTGGCCAGCCTGCGCGAGCCGGTGGACGCCTTCTTCGAGGCGGTGCTGGTCAACGCCGAGGATGCGCGCGTGCGCGCCAACCGTTACGCCCTGCTGGCCCGTCTGCGCGGGCTGTTCCTCGGCGTGGCGGACATCTCGGTACTGGGCTGA MSAKDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLNYAASRVYAAPRRLAVLVEQLEEQQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVDIAEIDRSGAKLRFAQHIPGQPAVNLLPTIVQDSLNDLPIPKRMRWAARRDEFVRPTQWLVMLFGDAVVDCEILAQKAGRVSRGHRFHANREVRISSPANYAEDLRSAYVLADFAERREIISRRVDELAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLDAGGKLLPRFITVANIESKDPAQIVSGNEKVVRPRLTDAEFFFKQDKKQKLEGFNQRLANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDEARAARAGLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDFAVAQYAGKVKSDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQAVQAFRKLPQAEALAAANKRVSNLLSKAEGGVAAQVEAHYFDNPSEFALHAAIQQADQAVQPLAAARQYNEALAKLASLREPVDAFFEAVLVNAEDARVRANRYALLARLRGLFLGVADISVLG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0014 CDS 15862 16809 - Glycine--tRNA ligase YP_001185521 146305056 5106689 PFAM: glycyl-tRNA synthetase, alpha subunit 6.1.1.14 Cytoplasmic[Class 3] biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA TIGR00388|glyQ|glycyl-tRNA synthetase, alpha subunit|equivalog_domain|2e-168|6.1.1.14|Protein synthesis|tRNA aminoacylation PF02091|tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit|11|298|1e-148 COG0752|GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. ; COG0752|GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. GTGAGCCAGAACAAGCCTGCCGTGCGCACCTTCCAGGACCTGATCCTGGCCCTGCAGAACTACTGGGCCGAGCAGGGCTGCGTGGTGCTGCAACCCTACGACATGGAAGTGGGCGCCGGCACCTTCCACACCGCCACCTTCCTGCGCGCCGTCGGCCCCGAGACCTGGAACGCCGCCTACGTGCAGCCGTCCCGTCGCCCGACCGACGGCCGCTACGGCGAAAACCCCAACCGCCTGCAGCACTATTACCAGTTCCAGGTGGTCTTGAAGCCCAACCCGGAGAACTTCCAGGAGCTGTACCTGGGTTCGCTCAAGGCCATCGGCCTCGACCCGGAAGTGCACGACATCCGCTTCGTCGAGGACAACTGGGAATCGCCCACACTCGGCGCCTGGGGCCTGGGCTGGGAAATCTGGCTCAACGGCATGGAAGTCACCCAGTTCACCTACTTCCAGCAGGTCGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTATGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTCGACTCGGTCTACGACCTGATCTGGACCGACGGCCCGTTCGGCACCGTGACTTACGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCCACCTACAACTTCGAGCACGCCAACGTCGAGAAGCTGTTCGAGCTGTTCGACTTCTACGAGAGCGAAGCCAACCGCCTGATCGAGCTGGAGCTGCCGCTGCCGACCTACGAGATGGTGCTCAAGGCCTCGCACACCTTCAATCTGCTCGACGCCCGTCGCGCCATTTCGGTGACCGCGCGCCAGCAGTACATCCTGCGCGTGCGCACCCTGGCCCGTGCGGTAGCGCAGAGCTACCTGCAGGCGCGCGCCAAGCTCGGCTTCCCCATGGCCACCCCCGAACTGCGTGACGAAGTACTGGCCAAGCTGGAGGCGCAAGCATGA MSQNKPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLGSLKAIGLDPEVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYLQGVDSVYDLIWTDGPFGTVTYGDVFHQNEVEQSTYNFEHANVEKLFELFDFYESEANRLIELELPLPTYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARAVAQSYLQARAKLGFPMATPELRDEVLAKLEAQA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0015 CDS 17057 17623 + DNA-3-methyladenine glycosylase I YP_001185522 146305057 5106690 TIGRFAM: DNA-3-methyladenine glycosylase I PFAM: methyladenine glycosylase 3.2.2.20 Unknown[Class 3] biological_process|GO:0006281|DNA repair|IEA ; molecular_function|GO:0008725|DNA-3-methyladenine glycosylase I activity|IEA TIGR00624|tag|DNA-3-methyladenine glycosylase I|subfamily|6.6e-119|3.2.2.20|DNA metabolism|DNA replication, recombination, and repair PF03352|Adenine_glyco, Methyladenine glycosylase|6|180|6e-73 COG2818|Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ; COG2818|Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ATGCCCCGCTGCTTCTGGTGTACCGACGATCCGCTGTATCAGGCCTACCACGACGAGGAATGGGGCGTGCCGCAGCGCGATGCGCGCCAGCTGTTCGAGATGCTGCTGCTCGAAGGCGCCCAGGCCGGGCTGTCGTGGATCACCGTGCTGAAGAAGCGCGAGCGCTACCGCCAGGTGCTGCATGGCTTCGACCCCGAACGCCTGGCGCGTTTGAGCGACGAGGAAATCGAGGCGCTGATGCAGGAGCCTGGCATCATCCGCAACCGCCTCAAGCTCAAGGCCGTGCGGCAGAACGCCCAGGCCTGGCTGAAGCTGGAGGATCCGGTGAGCTGGCTCTGGTCCTTCGTCGGCGGCGCGCCGAAGATCAACCATTTCAGCGACCGCAGCCAGATGCTGGCAGTGACGCCCGAGGCCGAGGCGATGAGCAAGGCGTTGCGCAAGGCCGGCTTCAACTTCGTCGGGCCGACCATCTGCTATGCCTTCATGCAGGCCACGGGCATGGTGATGGACCACACCACCGACTGCGACCGTTACCCCGAATTGAGCGGTTCGGCGGCGACTGCCTGA MPRCFWCTDDPLYQAYHDEEWGVPQRDARQLFEMLLLEGAQAGLSWITVLKKRERYRQVLHGFDPERLARLSDEEIEALMQEPGIIRNRLKLKAVRQNAQAWLKLEDPVSWLWSFVGGAPKINHFSDRSQMLAVTPEAEAMSKALRKAGFNFVGPTICYAFMQATGMVMDHTTDCDRYPELSGSAATA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0016 CDS 17672 18604 + lipid A biosynthesis acyltransferase YP_001185523 146305058 5106691 PFAM: lipid A biosynthesis acyltransferase Unknown[Class 3] biological_process|GO:0009245|lipid A biosynthetic process|IEA ; molecular_function|GO:0008415|acyltransferase activity|IEA TIGR02207|lipid_A_htrB|lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase|subfamily|3.3e-16|2.3.1.-|Cell envelope|Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides PF03279|Lip_A_acyltrans, Bacterial lipid A biosynthesis acyltransferase|23|301|1e-38 COG1560|HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. ; COG1560|HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. ATGGCAGGTACAATGCCGGCTTTTCATGCAACCCTGGAGTCATTCGTGGAAGCATTCAAAGGCCGGCTGGTGGTCGGCTTTCTCCGTCTGTTCGCCCTGCTGCCCTGGCGCGCCGTGCAAGCGGTGGGCAATGCCATCGGCTGGCTGATGTGGAAATTGCCCAACGGCTCGCGCGACGTGGTGCGCATCAACCTGAGCAAGTGCTTTCCCGAGCTGAACCAGGCCGAACTGGATCGTCTGGTCGGGCAGAGCCTCAAGGACATCGGCAAGACCCTGACCGAAAGCGCCTGCGCCTGGATCTGGCCGGCGCAGAAATCGCTCAAGCTGATCCGCGAAGTGGAAGGCCTGGAGGTGCTGCAGCAGGCGCTGGCCTCGGGCAAGGGCGTGGTGGGCATCACCAGCCACCTGGGCAACTGGGAAGTGCTCAACCACTTCTACTGCAACCAGTGCAAACCGATCATTTTCTACCGCCCGCCCAAGCTCAAGGCCGTCGACGAGCTGCTGCAGCAGCAGCGCGTGCAGATGGGCAACCGCGTGGCGCCCTCGACCAAGGAAGGCATCCTCAGCGTCATCAAGGAAGTGCGCAAGGGCGGCGCCGTGGGCATTCCGGCCGATCCGGAGCCGAGCCGTTCCGCCGGCGTTTTCGTGCCCTTTCTCGGCACCACTGCGCTGACCAGCAAGTTCGTCCCGGGCATGCTCACCGGCGGCAAGGCGGTGGGTGTATTCCTGCATGCGCTGCGTCTGCCCGATGGCAGCGGCTACAAGGTGATCCTCGAGGCGGCGCCCGAAGGCATGTACAGCGAGAACGTGGAAGAAGGCGTGGCGGCGATGAGCGAAGTGGTGTCGCGCTACGTACGCAACTACCCGAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGTCCGGACGGCGAGGCCAAGTGGTACTGA MAGTMPAFHATLESFVEAFKGRLVVGFLRLFALLPWRAVQAVGNAIGWLMWKLPNGSRDVVRINLSKCFPELNQAELDRLVGQSLKDIGKTLTESACAWIWPAQKSLKLIREVEGLEVLQQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDELLQQQRVQMGNRVAPSTKEGILSVIKEVRKGGAVGIPADPEPSRSAGVFVPFLGTTALTSKFVPGMLTGGKAVGVFLHALRLPDGSGYKVILEAAPEGMYSENVEEGVAAMSEVVSRYVRNYPSQYMWSMKRFKKRPDGEAKWY Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0017 CDS 18721 18987 + type IV pilus assembly PilZ YP_001185524 146305059 5106692 PFAM: type IV pilus assembly PilZ Cytoplasmic[Class 3] PF07238|PilZ, PilZ domain|3|88|9e-05 ATGTCGAACCAGCGTCACCAGGTACGAACCCCGATGAAGTGCCGGATCAAGATCAGCCACCCGAGTTTCGGCGAGCTGGTGGCACAGACCCGCGACCTGTCCGATAGCGGTGTCTATGTGAAGCACCCCGACATGACGAGCCTGACCGTCGGTGCCGAAGTGACCGGCCAGGTGCAGGACCTGCCGTTCCCCGCTCCGGTGTTGAAGATGGAGGTGGTGCGTGTGGACTCCGAGGGGGCCGGTCTGCGCTTTCTCGACGAGGATTGA MSNQRHQVRTPMKCRIKISHPSFGELVAQTRDLSDSGVYVKHPDMTSLTVGAEVTGQVQDLPFPAPVLKMEVVRVDSEGAGLRFLDED Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0018 CDS 19365 19931 + NLP/P60 protein YP_001185525 146305060 5106693 PFAM: NLP/P60 protein Cytoplasmic[Class 3] TIGR02219|phage_NlpC_fam|putative phage cell wall peptidase, NlpC/P60 family|hypoth_equivalog|9.4e-05||Mobile and extrachromosomal element functions|Prophage functions PF00877|NLPC_P60, NlpC/P60 family|75|183|3e-27 COG0791|Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]. ; COG0791|Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]. ATGCAATGCCTTGATTCGGAAGGGCTTCCGCGCAAAGGCCAATCACCAGGGTCACTGGGTTTGAATAAGTTCTTCATGTCACTTTGCCTGGCAGGCGCTCTTTTACTGGGAATCTGTACCCAAGCCTCCGCCACCTTTCGCATTCACACCATTCCTGCCACTGCGCCAGCGGCCGAACCCAAGCCAGCCAGCGAAGTGATCGACCGCGCCCTCGCTGCACTGGGTACGCCTTACCGCTGGGGCGGTAGCAGCCTGCGCCACGGCTTCGATTGCAGCGGCCTGGTGCAATACGCCTTCAAGACCCAGGAAGACCTCGAACTGCCGCGTACCTCCCGCGCGTTGTCGCGCCTGGACGCGCCGTCGGTGAAAAGCAGCGACCTGCAGCCCGGCGATTTGCTGTTCTTCCGCATCCGCAGCCGTTCGGTGGACCACGTGGCCATCTACATCGGCGAGGGTCGTTTCGTCCATGCGCCGCGTCGCGGCACCAAGGTGCGTATCGACCGCCTCAACGATGCCTACTGGCAACGTCATTTCCAACTGGCCAAGCGGGTGGTGTCGCAAGCCTGA MQCLDSEGLPRKGQSPGSLGLNKFFMSLCLAGALLLGICTQASATFRIHTIPATAPAAEPKPASEVIDRALAALGTPYRWGGSSLRHGFDCSGLVQYAFKTQEDLELPRTSRALSRLDAPSVKSSDLQPGDLLFFRIRSRSVDHVAIYIGEGRFVHAPRRGTKVRIDRLNDAYWQRHFQLAKRVVSQA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0019 CDS 20108 20545 + Tir chaperone family protein YP_001185526 146305061 5106694 PFAM: Tir chaperone family protein Unknown[Class 3] ATGCCCAGTGCTGCCTATTGCCGGTTGGTCGATGACCTTTGCCAGCTGGCTTTGTTGCCGAACCCGAAAGCGCTCTATGAACGAACCGCCCTGACGGTGGGCAAGGTCAACTTCAGCCTCGTCGAGCGCTCAGGCGATCCGTACAGCGAGGTGTTGATCTATACCGACCTGGGACCGTTGCCCAGCCAGCGTCGAGATGCCGTGCTGCTGCGCTTGCTGGATATCAACTTTCACCTGTTCGTCGGTGCTGGCAGTCCCAGCTGTTCCTACAACAGCGAGACCCAGCGCCTGATGCTGGGTGTCAGCCTCCTGCTGCAGGCTGCCACTGGCCAACGCTTGCTGGCACTGCTCGGGCAACTGGCCGACATGGCTCATAACTGGCGTGACGATCATTTCCTGGAGCGCCCGAGCCCACGTCATGCGCAGGTGAGGTTGTGA MPSAAYCRLVDDLCQLALLPNPKALYERTALTVGKVNFSLVERSGDPYSEVLIYTDLGPLPSQRRDAVLLRLLDINFHLFVGAGSPSCSYNSETQRLMLGVSLLLQAATGQRLLALLGQLADMAHNWRDDHFLERPSPRHAQVRL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0020 CDS 20545 22776 + hypothetical protein YP_001185527 146305062 5106695 Unknown[Class 3] ATGGACAGAATCCACCAGCCCAGTTCAGCCTCAGCACATGGGGTTGGCCACAGCCCAAGCCCATCTGTCACTGGCGCGCGCCCTGCTTCACCGGTATCGCAACCCAGCGTCACGGTGGCCAGCGAGGCACCCTTGCAGGGGCGTCAGGCCGAGCGCGCGGCCAGGCCGCAGAGTGCGCTCGAACGCTACGAATCCACCTTCCCGACGCTACGCGAGTTACGCCAGAAGGCCCAGCGTGAGGCGGCCCGGCAGGCGGACACGGACAGACCGGCCTATCACCCCCTGGAGGCTGCCAAGCGGCGCATGCTGATCGAAGGTGAATTGCTGCGGGCGCACCCTTCGCTGAGCCTGCAGCAGGCGTCGGAGATTCTCAATATGGGGCATGTCGAGCAGCTGGCCTCGCCGATTCCCTATGGCGACAGCCTGGAGAAATTGGCGACCGCGCTTGACCAGTTGTTCGCCCCGGGCCTGCAGGATGAGTTGCCGTCCCTGGTGCAATTGGGCGCGATACTGGACCAGGGCCTTGGTGAGATATCGCGTCACCTGGAAGGGCAGTTGGATCTGTATCGGCAGGTACTGCAGCACACCTTGCTGGATGACACCGAGCGAGCTCAGGTGAAAGCCGGGCAGCAGGCCTTGCAGGCGATGGCAGAGCGCTGGACGGAGGATATCAAGGGCAAGGTGCTGGGCAAGGCACAGGCGCTGGCCGAAAGCCGCCTGCAAGACCAGCAAAGGGCCCAACAGCAAAGCCCGGATCAGATGGAAGTCCAGACCCGGCAGTGGCAAAACATCCGTGACTACCTCAAGAGCGCGCAGGACGCGTTCGATACGCAAGGTGAGTTCGGCACGGCCTTGCAGCATGTCCGGCTCGACAGCCAGGTAGAGGCAATGAATGCCAGTAACCAGGGCCTGTTTTCCGCGATGCGTTCGTTCATGGCCAATGGTGTTCCGCCGGGTATCGCCTCGACATTGCTTTATGTGATGGCGCGCGCCTATGTCTCACCGCAGTTGGCCGGGGCAGAATTCGTCGCTCGTGCGCTGGGCAGTGGCATGGCCATCGGTGCGGTGCATGAGACCCTGGACAACTTCGCCAAACCGGCGGCGCGTGAAGTTTTGGCCTCGCTGGGTATGACGGAGTTGCGCGAGGTCGACCCGAGCGAAGTCATCCCGGACCCACCGCGAGCGGTGATCGTCGAGGGGCGTTACCAGGAACGCGACGCCGGACAAATGGCTGAAGCCCAGGCCGAGGTCGAGCAGGCGCGCAAGGCGTTCTTGAATGCACAGCAGGACTACAAGACCGGGACGCTCAAGGGCGATGCGATCACGCTGACCAGCCTGCCCGGTGCGCAGGCGGCTCGCGAGCTCGTCAATCTGCTGTCTTCACAAAATGCCGCATCAACCGGGGCGATGGCACTGGCTGCGTTTCTGGGCAATGCCGGCATGTATGGCCTGCAGGCGATGGGACAACGGCAGAAGACGTTCAGCCATGAGGGGCATGATCTGCCGACCCACGTACCCAAGCCGGCGCCACAGGAGGCTCTGGGCCGGCGCCTGGGCAATGTGCTCAAGGATGGGCTGTCGACGATCAATCCGCTGGATGCCTCGGTCAGGCAGAAGTACGACAGCAAGGGGTGGAGCGCTGCACTGGGCATGATGGGCTACAACAGCGTCGAAGGTTCCATCAGGCAGCTGGACACCAGTACAACCGGCGGCATGGCCTCGTCCGTGATACTCACGGGGCTGCAGACCTTTCTCATGCAACAGGTGTTCTATGCCAACAAGCCTGCCGGCGACGAGGCCGAGGCGGGCGGCACCGGCCGTTTCGACAACGCGCTGAACAATATCCGTGACCCCGATCGGGAAACCTTGCCCCATGGCTCGCGTCCGGGCACGACAGAGCGCCGGATCGAAAACACCTACGACCGTCTGCGTGGAGTGATTCAAGGGCCACCGCAGGCCGCGACCGAGATCACCGAGGCCGTGACCAGCACGGTCGTGAGCGGTCTTGGGCAACTGGGGCGCCAGGTGGCCGAGCAGGCTTCACGGCAGCAGCAACGGCTTGCGTCCGAGGTCAGCACCAGGGTGTTCAATACGCTTGCAGGCGGGCTCGAGCACGTGGGGCGTCAGGTGGCGGAGCAGGCCATGAGACAGCGCGACCGGTTCAGGGCGGCGGAGCCGCCAGGCGATATCGAAATGGGTTTGCAGGCACCTCGGGATCGAGACAACGTCTGA MDRIHQPSSASAHGVGHSPSPSVTGARPASPVSQPSVTVASEAPLQGRQAERAARPQSALERYESTFPTLRELRQKAQREAARQADTDRPAYHPLEAAKRRMLIEGELLRAHPSLSLQQASEILNMGHVEQLASPIPYGDSLEKLATALDQLFAPGLQDELPSLVQLGAILDQGLGEISRHLEGQLDLYRQVLQHTLLDDTERAQVKAGQQALQAMAERWTEDIKGKVLGKAQALAESRLQDQQRAQQQSPDQMEVQTRQWQNIRDYLKSAQDAFDTQGEFGTALQHVRLDSQVEAMNASNQGLFSAMRSFMANGVPPGIASTLLYVMARAYVSPQLAGAEFVARALGSGMAIGAVHETLDNFAKPAAREVLASLGMTELREVDPSEVIPDPPRAVIVEGRYQERDAGQMAEAQAEVEQARKAFLNAQQDYKTGTLKGDAITLTSLPGAQAARELVNLLSSQNAASTGAMALAAFLGNAGMYGLQAMGQRQKTFSHEGHDLPTHVPKPAPQEALGRRLGNVLKDGLSTINPLDASVRQKYDSKGWSAALGMMGYNSVEGSIRQLDTSTTGGMASSVILTGLQTFLMQQVFYANKPAGDEAEAGGTGRFDNALNNIRDPDRETLPHGSRPGTTERRIENTYDRLRGVIQGPPQAATEITEAVTSTVVSGLGQLGRQVAEQASRQQQRLASEVSTRVFNTLAGGLEHVGRQVAEQAMRQRDRFRAAEPPGDIEMGLQAPRDRDNV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0021 CDS 22972 23322 - hypothetical protein YP_001185528 146305063 5106696 Unknown[Class 3] ATGAAACAGGTATCGCAGAAACTGGCGTTCTATGAGCATGTGGCTGCCGAAAGGAGCGCCGTCTGGCCGGTGGCCTCGGGCGTGACCTTTGTGAGCCGGCGAGAGCATCAGGACTGGGGCATCGCTTTACACGTGGAGAGCCTCGCCATGAGCCCCGAGCAATTGCGTAATGCCCTGGAGCGCCGCTTCGTCGAATCCGACCGTTACAGCGACTACTTCCTCTTCCTCAACGTGCAGCAGGACTTCGTGGTTTGGCACGCCAGTCCGGACGTTGAGGGTGTGGGTGACTCCCTGGACGACATCTGCCGAGAACAGCTGCAGTTGGCAGGGCTCGGCCATCTGCAGTCCTGA MKQVSQKLAFYEHVAAERSAVWPVASGVTFVSRREHQDWGIALHVESLAMSPEQLRNALERRFVESDRYSDYFLFLNVQQDFVVWHASPDVEGVGDSLDDICREQLQLAGLGHLQS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0022 CDS 23325 23528 - hypothetical protein YP_001185529 146305064 5106697 Unknown[Class 3] ATGACCATTCGTAGTTTGACTGTCCTTCTGGCCCTGAGCTTGTTGGCGGGCTGTGCCAGCAAGATCGGCTGCTCCGGGTACGCCTGCGAACGCCCCGACTCCACGAACCGGGCCCTGGTGATCTGGTGGCCGGAAGACATGCGCCAGGGCCTCAATGATCGCGACCCCGCGCGGGATTACACCGTCGTTCCTCTTAAGGACTGA MTIRSLTVLLALSLLAGCASKIGCSGYACERPDSTNRALVIWWPEDMRQGLNDRDPARDYTVVPLKD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0023 CDS 23528 25618 - type III secretion outer membrane pore, YscC/HrcC family YP_001185530 146305065 5106698 TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family PFAM: type II and III secretion system protein Outer Membrane[Class 3] TIGR02516|type_III_yscC|type III secretion outer membrane pore, YscC/HrcC family|equivalog|1.1e-137||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00263|Secretin, Bacterial type II and III secretion system protein|319|535|2e-39 COG1450|PulD, Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion]. ; COG1450|PulD, Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion]. ATGCGCAATACCCTGATATCGCTGTCGTGGTTGTTATGGCTCGTGTCCATACCGGCGCACGCCGTGCCACCCGAGAGCTGGAAACAGACCGCCTATGCCTACGATGCCCGGCAAACCGACCTGAACTCGGCGTTGGCGGACTTCGCCCGGGAGTTCGGTCTATCGCTGGACATGCCGCCCATGGATGGCATCGTCGACGGTCGTATCCGCGCCAGCAACCCGCAGGAATTTCTCGAACGACTCGGGCGTGAATACCAGTTCCAATGGTTCGTTTACAACGAAACGCTCTACATCAGCCCCACCCGCGAACAGACGTCGGCCCGCATCGAGGTCTCGCCGGATGCCGTCGATGACCTGGAAAACGCACTGACCGCCATCGGCCTGCTCGACCCGCGTTTCGGCTGGGGCACGCTACCCGAAGAAGGCCTGGTGCTGGTTCGCGGCCCGGCCCAGTACGTACAGTTCATTCGCGAATACAGCCAGAAGGTCGAAGAACCGGAGAAAGCGGAAAAACAGGACGTCATCGTCTTCACCCTGAAGTATGCCAACGCGGCTGATCGCTCCATTCGTTATCGTGATCAGGAGCTGCGTGTAGCAGGTGTGGCCAGCATCCTTCGCGAACTGCTGGAAACCCGGTCACGGGGTGAACCCATCAGCGGCGTGGGCATTTTCCAACCATCCGGTACGACCCAAGGCCTGGCGCCAACCCGCCCGATGGGGTTGCCTTACGCTGGGATGAGCGGCCTGGATGGCGGCCTCCTCGAGCAGGGACTCGACAATGTACTGGGGCTGGCTCAGTCCTCTTCGCGCAAGCGCAGTGAAAGCCGCAGCCGCTCGCAGATCCGCGTCAGCGCCGACGTGCGCAACAACGCCGTCCTGATCTATGACCTGCCAGAGCGCAAGGCCATCTATCAGGGCCTCATCCAGCAACTGGACGTGCCGCGCAACCTGATCGAGATCGATGCCGTGATTCTCGATATCGACCGTAACGAGCTGGCCGAACTGTCCAGCCGCTGGGCCTTCAACTCCGGCAGCGTCAGCGGCGGCGCCAACCTGTTCGAACCCGGTACCACGTCGACGCTGTTCATCCAGGATGCCGGTCGGTTCGCCGCGGAATTGCGTGCACTGGAGGGAACCGGGGCCGCCTCGATCATGGGCAACCCCTCGATCCTGACCCTGGAAAACCAGCCCGCGGTCATCGACTTCAGCCGCACCGAGTACCTGACGGCGCTGGCCGAGCGCGTTGCCAATATCCAACCCATCACCGCCGGCACCAGCCTGCAGGTGATCCCGAGGTCACTGAATCAGGGCAGCCGCTCCCAGGTCCAGCTGATCGTCGACATCGAAGACGGACAGATCATCGAGTCGAACATCTCCGAGGAGCAGCCGTCGGTACGCCGTGGCAATGTCAGCACCCAGGCAGTGATCGCCGAGCATGGCTCGCTGGTGATCGGCGGTTTCCACAGTCTCGAAGCCAACGACAGGATCAACAAGATTCCCTTGCTCGGCGATATCCCGGTCATCGGTAAATTGCTGTTCCAGTCACGCAATCGCGAATTCAACCGGCGTGAGCGCTTGTTCATCCTCACCCCTCGTCTGATCGGAGATCAGGTGAACCCTGCGCGCTACGTGCAACATGGCAATCCGCATAACCTGGACCGGCAACTTCGCGAGATCGACGAGCGCCGCCGGGGTACCGAACGCCCGAGTCGGGGCGACATCGAACATGCCTTCACCCAGCTGCTCGATGGCATACACCCCTCCGGGTTCGACAGCGCACCCTTGCCGCTCAGGGCAGAAACGCTCTGCAACTCGGATCACGGACTGACGCTGGATGCCGAACGCTCCCAGTGGTTCGCCCGCGATGGTTGGGGTGTAGCAGTGGTCGTGGCACGTAACGACACGGCACAACCGATACGCATCGATGAGAGCCGCTGTGGGGGACGCTGGGCCATGGGGGTCAGTGCCTGGCCACGCGCCTGGCTCCAGCCTGGCGAGGAGAGCGAAGTGTTCATTGCCCTGCGCCAGCCGCAATCGCTGCAAAAAACCGGACAAGGCCGAACTTCATTGCTGCACAGGAGCACCCCTTGA MRNTLISLSWLLWLVSIPAHAVPPESWKQTAYAYDARQTDLNSALADFAREFGLSLDMPPMDGIVDGRIRASNPQEFLERLGREYQFQWFVYNETLYISPTREQTSARIEVSPDAVDDLENALTAIGLLDPRFGWGTLPEEGLVLVRGPAQYVQFIREYSQKVEEPEKAEKQDVIVFTLKYANAADRSIRYRDQELRVAGVASILRELLETRSRGEPISGVGIFQPSGTTQGLAPTRPMGLPYAGMSGLDGGLLEQGLDNVLGLAQSSSRKRSESRSRSQIRVSADVRNNAVLIYDLPERKAIYQGLIQQLDVPRNLIEIDAVILDIDRNELAELSSRWAFNSGSVSGGANLFEPGTTSTLFIQDAGRFAAELRALEGTGAASIMGNPSILTLENQPAVIDFSRTEYLTALAERVANIQPITAGTSLQVIPRSLNQGSRSQVQLIVDIEDGQIIESNISEEQPSVRRGNVSTQAVIAEHGSLVIGGFHSLEANDRINKIPLLGDIPVIGKLLFQSRNREFNRRERLFILTPRLIGDQVNPARYVQHGNPHNLDRQLREIDERRRGTERPSRGDIEHAFTQLLDGIHPSGFDSAPLPLRAETLCNSDHGLTLDAERSQWFARDGWGVAVVVARNDTAQPIRIDESRCGGRWAMGVSAWPRAWLQPGEESEVFIALRQPQSLQKTGQGRTSLLHRSTP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0024 CDS 25620 26045 - hypothetical protein YP_001185531 146305066 5106699 Cytoplasmic[Class 3] ATGGAATTCAGTGAATTCTCCGACGTCATCGCCCAATGGTGCGAGGCGTCCGCACTGCCACTCGACTGCTGGATCGACGATGCCAACGCGCGCCTTGCCGAGATGGGCGGCGGCGTCAGATGCAGCCTGGAAGTGCTCAATCCCTTCGAAGCCAGCGACCAACAACGATTGCAGGCGGTGCTGAGCCAGGGCGGTGCCGGCCTGGCCTGTGCCTGCGATGGTGCATTCGCCATCGACCCCGACACCCACGCACTCGTCCTGGTGAACTGGCATCGCGCACCCTGCTCCGTGGATCAGCTGCTGGCCAGCCTGGAAAGGCTGGCCAACCAGCGGGCTGCCCTGATCAGCCTGCTCCACGTATCCATACGCGAGGCGGCGCTCATCGCACCGCAACCGTCCTTCAACGCACTGCATCCGGGAGTGTGA MEFSEFSDVIAQWCEASALPLDCWIDDANARLAEMGGGVRCSLEVLNPFEASDQQRLQAVLSQGGAGLACACDGAFAIDPDTHALVLVNWHRAPCSVDQLLASLERLANQRAALISLLHVSIREAALIAPQPSFNALHPGV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0025 CDS 26032 26256 - hypothetical protein YP_001185532 146305067 5106700 Cytoplasmic[Class 3] PF06266|HrpF, HrpF protein|1|74|4e-09 ATGTCAAGCCTAGAAGCCCTGCGTAACCGTCTGGACCGCGCCCAGGAAAGCGCCGTGCGAAACAAGGACGATGCCTTGCTGCAGGCAGCCGAAAGCGCCGATATCAATGACATGCACGCCTACAACGAGGCGGCGCGCAAAGCCCAGCTCGTCAGCACCGTGGTCAGTGAGGAACTGCGCGCTCAACACGGCCTGACCAAAGCGATCATCGATGGAATTCAGTGA MSSLEALRNRLDRAQESAVRNKDDALLQAAESADINDMHAYNEAARKAQLVSTVVSEELRAQHGLTKAIIDGIQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0026 CDS 26417 27004 - type III secretion apparatus protein, HrpE/YscL family YP_001185533 146305068 5106701 TIGRFAM: type III secretion apparatus protein, HrpE/YscL family PFAM: HrpE family protein Cytoplasmic[Class 3] biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA TIGR02499|HrpE_YscL_not|type III secretion apparatus protein, HrpE/YscL family|equivalog|5.5e-31||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF06188|HrpE, HrpE protein|1|186|6e-29 GTGCTGACTAAACGCCGCTTCACCCTTGGCTCAGCGGTACTCGAAGAACCGATTCTGCGCCGACAGCTGCTTGCAGAAAGCCTGCGCGCGGACGAGCTTCTGGCCCAAGCACGCCTGCAGGCCGAACAATTGCTGCAGCAGGCCCACGAGCAGCGCCAGCACTACCTCGATGAAGCCGTCGCCCGCTTCTGGAGCGAAGCCAACGCACTGCTTCAGGCGATACAGGAGGAACGCGCAAGTTATCAGCGCGATGCCTTGTCCGCTGTCGACTCGCTATTGAACATCGCCCTGTCGCGTTTGCTGGATGAAACGGATCTGCCGCAGCGGATCAGCGCATTGCTGCGCAACCTGGTCGTTGGCCTGCCAAGCAAGGCGGAGGCGAACCTGGCCTGTCACCCCGAAGCCGCCAGCACGGTTCGCGCCTGGCTGCAGACGATGGGCTTCGACGCGCTCTGGCAGGTGCAGGAAGACCCAGGCATGGCACCTGAATCGCTACGCCTGAGCAACACGCTGGGTACCTTTCACATCGACTGGCCGTCGTTGCGGCGCGGGCTGATACCGAGCCTGCCCGAAGCCCGGCATGCCTAA MLTKRRFTLGSAVLEEPILRRQLLAESLRADELLAQARLQAEQLLQQAHEQRQHYLDEAVARFWSEANALLQAIQEERASYQRDALSAVDSLLNIALSRLLDETDLPQRISALLRNLVVGLPSKAEANLACHPEAASTVRAWLQTMGFDALWQVQEDPGMAPESLRLSNTLGTFHIDWPSLRRGLIPSLPEARHA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0027 CDS 26994 27527 - hypothetical protein YP_001185534 146305069 5106702 Unknown[Class 3] ATGAGTGATGCTGCCGAGCGCTGGGTGCGCTGGTGGTGCGAGGCCTGGCACTTCGCGCATCCGGGCTGGCGGCGATCATCTCCGGTGCTGGCAGCCGCGGCAGATTGCTCCCATAGCCGTCATGCCGCGCTCGCCCAGTCTCTGGGAATCGGCGCTACGCAACCCCCGCCACCGCATGAGGGTGTCCTGCAATGGCTGGCATTGAACGAGCGCCAGCGCCAGCACGCGCTAGCCCTGGCGCAGCACATCTGTTCGGCGAAAGCCCCCTGCCAGGCCCTGCCTGCCGATGCCGACTGGTGTCGCAGCTTGGGCAAGGCATTGCGTCCCGGCTTGTGGCTGACCGCCGAAGCCACAGATCCCAGGCTGTTGCTCGGCGCCTGGGCCGGACCTGCATGCTGGGAACGCCTGCGCCTGCAGTGGGCGCCCGGTTCGCTGGAAGAACTCCCCCCGGATCTGCCAGCCAGACGCCTGGCCACCCTGTGGGCGGCGGTGCTGTGGCGAACCTCGCAGATGGAGCGCACTCGTGCTGACTAA MSDAAERWVRWWCEAWHFAHPGWRRSSPVLAAAADCSHSRHAALAQSLGIGATQPPPPHEGVLQWLALNERQRQHALALAQHICSAKAPCQALPADADWCRSLGKALRPGLWLTAEATDPRLLLGAWAGPACWERLRLQWAPGSLEELPPDLPARRLATLWAAVLWRTSQMERTRAD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0028 CDS 27524 28342 - type III secretion apparatus lipoprotein, YscJ/HrcJ family YP_001185535 146305070 5106703 TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family PFAM: secretory protein YscJ/FliF family protein Cytoplasmic Membrane[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR02544|III_secr_YscJ|type III secretion apparatus lipoprotein, YscJ/HrcJ family|equivalog|5.8e-85||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01514|YscJ_FliF, Secretory protein of YscJ/FliF family|7|202|7e-55 COG4669|EscJ, Type III secretory pathway, lipoprotein EscJ [Intracellular trafficking and secretion]. ; COG4669|EscJ, Type III secretory pathway, lipoprotein EscJ [Intracellular trafficking and secretion]. GTGAAATGGACGCTCTCCATTGTCGCCCTGTGCCTGCTTCTGTTGAGCGGGTGCAGTGATCGCACCGACCTGTTCAGCGGTCTTTCCGAACTCGATGCCAATGAGGTCATTGCCTCCCTCGGTGAACACCGCATCAGCGCGCGCAAACGCGCGGAGAAGGCGGGTGTGGTGGTGACCGTCGACACCGCAGAGATCAATCGAGCGGTGCGTGTACTGGAAGCAGCCGGGTTACCACGCCGGGCTCGGACCAGCCTGGGTGAAATATTCAAGAAGGAAGGCGTGATCTCCACGCCGCTGGAAGAACGCGCCCGGTACATCTATGCGCTGTCGCAAGAACTGGAATCGACGCTCTCGCAAATCGATGGCGTCATCGTCGCCCGTGTTCACGTCGTGCTGCCCGAGCGCATTGCGCCAGGCGAACCGGTACAGCCGGCATCGGCTGCGGTCTTCATCAAGCATGCCGCCAGCCTGGAGCCCGATGCCGTGCAACGACGGATTCAGCAGATGGTGGTCAGTAGCATCCCCGGCCTGGCCAGTACGGGGGTCGAGAGCAGCGAGAAGTTCTCCATCGTCTTCGTCCCGGCCGCCGAGCTTCAGGATGCAGATACTTTGGTGCCGTTCGGGCCCTTTCTGATCGAAAGCCAGAAACTGGGATTCTGGCAGCTCATGTCCTGGCTCATCCCCCTGGGAGGCCTGCTGCTATTGGCGGTCCTGACACTGCTGGTACGCCAGGACTGGCGCTCGGTATTGCTCCGTCGAGTACGGCCACGACAGCCGGCCAGCCATAACGTCTCGACACTGCCGAGCCGCGTCGCATGA MKWTLSIVALCLLLLSGCSDRTDLFSGLSELDANEVIASLGEHRISARKRAEKAGVVVTVDTAEINRAVRVLEAAGLPRRARTSLGEIFKKEGVISTPLEERARYIYALSQELESTLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHAASLEPDAVQRRIQQMVVSSIPGLASTGVESSEKFSIVFVPAAELQDADTLVPFGPFLIESQKLGFWQLMSWLIPLGGLLLLAVLTLLVRQDWRSVLLRRVRPRQPASHNVSTLPSRVA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0029 CDS 28353 28721 - type III secretion apparatus protein, YscI/HrpB family YP_001185536 146305071 5106704 TIGRFAM: type III secretion apparatus protein, YscI/HrpB family Unknown[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA TIGR02497|yscI_hrpB_dom|type III secretion apparatus protein, YscI/HrpB, C-terminal domain|equivalog_domain|2.9e-10||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis ATGAGCATTTCCAAGATAGACGGACTGACGAGTCCCGACTTGAAGCTCGACCAGGGACTGGTCAGTGAGCCTTCTCAGGCAGATGTCGATCTCTTTTCCAGCTTGATGCGAGACAACGGCAACACGGCTGACCAGCCCAGCCACCTGGCGGCCGTTATCGCCGAGACGGTGAATGCACGGATGACGTCTGTGGATGACCTCTCGCGGCAAGCCATGCGCCACATGAAGGAGGCCGTGACCGGCAACGATGTAAGCGCCATCACGGATATGAGCCGTGCCCTCTCGCAGTACTCGCTGCAAATGGCGGTAACGACCAAGGTGGTCAGCAAGACAGGGCAGGCACTCGAAAAACTGACCAACATGCAGTAG MSISKIDGLTSPDLKLDQGLVSEPSQADVDLFSSLMRDNGNTADQPSHLAAVIAETVNARMTSVDDLSRQAMRHMKEAVTGNDVSAITDMSRALSQYSLQMAVTTKVVSKTGQALEKLTNMQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0030 CDS 28765 29664 - HrpZ family protein YP_001185537 146305072 5106705 PFAM: HrpZ family protein Unknown[Class 3] PF04877|HrpZ, HrpZ|26|267|1e-27 GTGAATATGATTAGCAATATGCCGGGGTTGGTGGCCGGCAATTTCAGCAACTTCTCTATTGGCTCGCAAAGCAATAGCGAACGACCGCAGAACATGGACCAGGTGGTGGACAAACTGGCCGACATGTTGAAAGGCAGCGACCTGTCATCCTCCCCGCTGGGACAGATGGTCAAGGACAAGCTCGACGATTCGGGCGGCCTGATGGGCATCCTGAAAAAGGGCGGAATGGAGAACGCAGTCAAGGACGCCCTCAAAGACATCATCAGCGAAAAGCTCGGCGACAACTTCGGTGCCGCCCAGTCGTTCGGCCTGGGTAACGGCTCTGGCACTGGCGGTGCCGGTGGCGCTGGCGGCGGTCAGCAACCCGACCTACTGGAGCGCGTACTCAGCGGGCTGGCCAAGTCGTCCCTGGACGATCTGCTCGGCAAACAGGGTGAGGGTACGAAGTTCTCCAACAAGGACATGCCGATGTTGGAGGAAATCGCCAAGTTCATGGATGACCCGAGAAGCGGGATCAAGCCGCCCGACTCCGGCTCCTGGGCGAATGAGCTCAAGGAAGACAACTACCTGAACAAGGAAGAGACCGCCGCATTCCGAGCCGCCCTCGACCAGGTTGGCGGGGCGCTGGACCAGAAGGCATCCGGTCAGCCGTCTGGCATGCCAGGCGGGCTGGGCATGCCGGGTAACGCCGGGCAGAACATGCTCGGCGGCGAAGGCGGCCTCGGCGGCTCGGGCACGGGTAGCGCGGCGGGCAATCCTCTGCAGCAGCTGAACGACCTGATCCAGGGCCTGCAGGGTCTGGCCTCCCAACTCAGCCTGCAAAACCTCGCCAGTAGTGCAATGGATACGGCCAATGCCCTGGTCGGTGCGATGTTGCCCAACAACAGCCGCACAGCCTGA MNMISNMPGLVAGNFSNFSIGSQSNSERPQNMDQVVDKLADMLKGSDLSSSPLGQMVKDKLDDSGGLMGILKKGGMENAVKDALKDIISEKLGDNFGAAQSFGLGNGSGTGGAGGAGGGQQPDLLERVLSGLAKSSLDDLLGKQGEGTKFSNKDMPMLEEIAKFMDDPRSGIKPPDSGSWANELKEDNYLNKEETAAFRAALDQVGGALDQKASGQPSGMPGGLGMPGNAGQNMLGGEGGLGGSGTGSAAGNPLQQLNDLIQGLQGLASQLSLQNLASSAMDTANALVGAMLPNNSRTA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0031 CDS 29716 30009 - hypothetical protein YP_001185538 146305073 5106706 Unknown[Class 3] PF09589|HrpA_pilin, HrpA pilus formation protein|2|97|1e-15 ATGGCGATGGACCCAATCAACGGCGGCATGCAGCTGTTCAACCAAGCGACCAGTTCCCTCAACATGAACAACAACATCGCTGACGCGGCAGGCGACAGCAAGTCCTCCAAGGCCATGGAAGATGCCATGGCGCGCTCCGACGCCAGCAGCGCGAGGATGATCGACCTGCAAAGCCGTCACGCCGAGAAGATGAAAGTCGAAAACACCCTGCAGGCCATGCAGTCCGCCGAGGACGATGCTGCCAACAAGAAAATCAGCTCCACCGCACAGAACGCCAAGGGCATCAGCTACTAA MAMDPINGGMQLFNQATSSLNMNNNIADAAGDSKSSKAMEDAMARSDASSARMIDLQSRHAEKMKVENTLQAMQSAEDDAANKKISSTAQNAKGISY Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0032 CDS 30305 31210 - sigma54 specific transcriptional regulator, Fis family YP_001185539 146305074 5106707 PFAM: sigma-54 factor, interaction domain-containing protein Cytoplasmic[Class 3] biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0030528|transcription regulator activity|IEA TIGR02974|phageshock_pspF|psp operon transcriptional activator|equivalog|9.5e-24||Regulatory functions|DNA interactions PF07728|AAA_5, ATPase family associated with various cellular activities (AAA)|33|140|3e-06 COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ; COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ATGAGTGAGTTCGATTGGCCGGATGCTTTTTGGATGAATGACGGTGGTTTACCCAATCTCGAAGTCGTGGCAAGCAGCATCTCCGAACTGAATATCGATGTCCTGCTTACCGGCGAAACCGGTTCTGGCAAGGACACACTTGCGCAATACCTGCACAAGCTGTCCGGACGCAAAGGCCCATTCGTGGCAATGAACTGCGCAGCAATTCCGGAATCTCTGTTCGAGAGCGAGCTGTTCGGTGTGACCAGCGGCGCCTACACCGGCGCTGATCACTCCAGAATGGGCTATGTGGAGGCCGCCCAGGGCGGCACGCTGTACCTCGACGAAATCGACAGCATGCCCGCGTTCCTGCAAGCCAAGCTCCTGCGGGTGCTGGAGACCCGCCAGATCGAACGCCTGGGGTCGACCACGCCAGTCCCCTTGGATATCTGCGTCGTGGCCTCCGCGCAACGCTCGTTGGACGCCTTGGTCGAGCAGGGCGAGTTTCGCCGGGATCTCTACTTCCGCCTCAATGTCCTGACGCTGAGGCTGCCCGCGCTGAGACAGAAGCGCGAGTGGATCATCCCGATGTTCGAGCGCTTCGCATTCGAGGCCTCGCAGGACATGGACACGGCGCTACCGGTCATCGACCCTGCCATCGAACATGTACTGCTGAACCATGACTGGCCCGGTAATCTCCGCGAGCTCAAATCTGCGGCGAAGCGCCACGTGCTGGGTATAAACCTTTTGGGTATAGAAGCCGAACAGCCCATCGAGTGCGATCTCAAGTGCCAACTCCGGCTGATCGAAAAGGTGTTGATCCAGGAATCCCTGCAGCGCCACGAACATTGCATCGAGGCCGTGCTCCACGAGTTGGACATTCCCCGGCGCACGCTCTATCACCGCATGAAAGAGCTCGATGTCTGA MSEFDWPDAFWMNDGGLPNLEVVASSISELNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPESLFESELFGVTSGAYTGADHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIERLGSTTPVPLDICVVASAQRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAFEASQDMDTALPVIDPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIEAEQPIECDLKCQLRLIEKVLIQESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0033 CDS 31594 32523 - sigma54 specific transcriptional regulator, Fis family YP_001185540 146305075 5106708 PFAM: sigma-54 factor, interaction domain-containing protein Cytoplasmic[Class 3] biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0030528|transcription regulator activity|IEA TIGR02974|phageshock_pspF|psp operon transcriptional activator|equivalog|5.9e-23||Regulatory functions|DNA interactions PF07728|AAA_5, ATPase family associated with various cellular activities (AAA)|34|195|5e-06 COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ; COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ATGAGTAGGGGGGTCGCCGCAGAAAAAAGTGCGCGCAGACATGGTGGTACGGACGTTCCCGAGTTGGGCATTACGCTATCTGCAGGACATTTCAGAATGGACCTGCTTCTGTGTGGGGAAACTGGAACTGGCAAAGATGTGCTGGCGAGGCACATCCACGATCTGTCCGGCAGGACAGGCGCTTTCGTCGGCATAAACTGCGCCGCCATTCCGGAGGCATTGGCCGAAAGCCAGCTATTCGGTGTTGCCAGCGGTGCTTTCACTGGGGCCAACCGGTCACGCCAGGGTTATATCGAAGCCTCGAACGACGGTACGCTGTACCTCGACGAGATCGACAGCATGCCCCTGCAACTACAGGCGAAGCTGCTGCGCGTGCTTGAGACCCGTGGCGTCGAACGCTTGGGCACGACGAAATTCATCCCTCTCAATCTGCGGATCATCGCCTCGACGCAACGCCCTCTCGAAGAGCTGGTGGAGCAGGGACTGTTTCGCCGCGACCTGCTTTTCCGGCTCAATGCAATGACGCTGTCATTGCCTCCCTTGCGCCAGCGGCGCGAGTTGATCCTGCCGCTGTTCAAGCGATTCACCCGAAGCCTTGGCGCGAAGCAGGCAAATGGCGCACAAGCCCTGGACTCTCAACTGATCCAGCTACTGCTCAGCCACCCCTGGCCGGGCAATATCCGTGAACTGAAGTCCGCCGCCAAACGCTACGTGATAGGACTGCCGCCTATCGATGCCGGCGTCCTTGCTGATCTCGAAGACGGTGATTTTCCCCACGACAGGGGGCTCAAGAAGCGCATGCGCGCTGTGGAGAAAATGCTCATTCAGGACGCCTTGAAGCGTCACAAGAACGGTCTGGAGGCAGTCGCCGAGGAGCTCGGCATATCCCGTCGTACCCTGTATCAGCGAATAAAGGAACTTGACGTCTAG MSRGVAAEKSARRHGGTDVPELGITLSAGHFRMDLLLCGETGTGKDVLARHIHDLSGRTGAFVGINCAAIPEALAESQLFGVASGAFTGANRSRQGYIEASNDGTLYLDEIDSMPLQLQAKLLRVLETRGVERLGTTKFIPLNLRIIASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPPLRQRRELILPLFKRFTRSLGAKQANGAQALDSQLIQLLLSHPWPGNIRELKSAAKRYVIGLPPIDAGVLADLEDGDFPHDRGLKKRMRAVEKMLIQDALKRHKNGLEAVAEELGISRRTLYQRIKELDV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0034 CDS 32882 33268 - hypothetical protein YP_001185541 146305076 5106709 Cytoplasmic[Class 3] GTGCCGACAACTCACATGCGCCCGGCGGAACATGGACGATCACTTCGAGAAGAGGAGTGGCTGAAGAACGATCAGGCCATCGACCAGGGCCGTTACAGCTCGATCGCCTTGACCGGCAGTTTCGAGCATCAGCACCTCGCTCAATCAGACGGTCAGCTCGCTGCGGCAGCGCAGGAATACCCAAGGCGATGTAAAGGCGTGAGATGCAAAATCGCCGAGCCGTCCCTTACTTCCGCCAAGCCTGCAAAATGCAATCATGGTTTCTGCAAAAAAGCTGGCCGCGTTCTTTTCTGCTTCAACCCAGCAATAGCATTTCGCCACAGACATATACCGCTCGTCGTTTTTTATTTATCCAATCAAACAATAACAGCTCATCTTTTAGGGTAA MPTTHMRPAEHGRSLREEEWLKNDQAIDQGRYSSIALTGSFEHQHLAQSDGQLAAAAQEYPRRCKGVRCKIAEPSLTSAKPAKCNHGFCKKAGRVLFCFNPAIAFRHRHIPLVVFYLSNQTITAHLLG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0035 33299 35920 - 5106710 Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0036 CDS 33458 35032 - transposase IS66 YP_001185542 146305077 5106934 PFAM: transposase IS66 Unknown[Class 3] PF03050|Transposase_25, Transposase IS66 family|140|332|9e-59 COG3436|COG3436, Transposase and inactivated derivatives [DNA replication, recombination, and repair]. ; COG3436|COG3436, Transposase and inactivated derivatives [DNA replication, recombination, and repair]. ATGATCGCCGTGCCCGCCCCCCTTCCTGACGACCCAATCCTGCTCAAGCATTTACTGCTGCTGGCCAGTGAACAGGCGGCTGCGAAAGATGCTCGCATAGAACAACTTCAGGAACAGGTCGCCCTGCTGCGCCACAAGTTGTTCTCGCCCAAGTCCGAGCGCAGCCCTGAAGACGCCGACTCACCGCAGTTGGCCATGTTCAACGAGGTCGAAGAGCTGATCGAAGCGGCCGCTGCGCCAAGCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGAAATCGTTGCGCCGGTCAAGCGCCGTGGCAAGCGCAAGCCGTTGCCGGCCAACCTGCCGCGTGTCGAAGTCATCCACGACCTGCCCGAGCACGAGCTGACTTGCGCCTGTGGCGCCTGCAAACAAGTCATCGGCGAGGAGACCAGCGAACAGCTGGAGATTATCCCGATGCAGGTGCGGGTCATCCGCCATATCCGCAAGACCTACGCCTGCAAGGCCTGCGAAGCGGCGCCGCTCACTGCCGACAAGCCGGCCCAACTGATCGAGAAGAGCCTGGCCAGCCCCAGCGTGTTGGCCATGCTGCTGACCACCAAGTACGCCGACGGCATCCCGCTGTACCGCTTCGAGAAGATGCTCAGCCGCCACGGCGTCGACATACCACGCCAGACCCTGGCGCGCTGGGTGATCCAGAGCGGTGAACAGCTGCAACCGCTGCTCAACCTGCTGCGCGACAAGCTGCTCGAATACCCCGTTTTGCACTGCGACGAAACGCGCCTGCAGGTGCTGCATGAACCGGGACGCGATCCCACCGCGCAGTCCTGGATGTGGGTACAAAGCGGTGGACCACCGGATAAGCCGGTGATCCTCTTCGACTACACCGCCAGCCGCGCGCAGGAGGTGCCGCTGCGCTTGCTCGACGGCTATCGCGGCTACCTGATGACCGACGACTACGCCGGCTACAACGCCGTGGCCGCGCAAGAAGGCATCGAACGCCTCGGCTGCTGGGCGCATGCGCGGCGCAAGTTCGTCGAGGCGCAGAAAGTGCAACCCAAGGGCAAAACCGGCCGTGCCGACATGGCGCTGAACCTGATCAACAAGCTCTACGGCATCGAGCGTGACCTGAAGGACGCCTGCGATACCGAGCGCCTGGTCGCCCGTCAGCAACGCAGCCAGCCGCTGCTCGATCAACTCAAGACCTGGCTGGACAAGACCCAGCCGCAGGTCGTCGGGCAGACGGCGCTGGGCAGGGCGGTGAACTACCTGGCCAGCAACTGGAGAAAGCTGGTGCGCTACGTCGAAGGTGGACATCTGCCGATCGACAACAACCGCGCGGAGAACGCCATCCGCCCGTTCGTTATCGGGCGCAAGAACTGGCTGTTCAGCGACACGCCCAAGGGGGCCACGGCCAGCGCACAGATCTACAGCCTGATCGAAACCGCCAAGGCCAATGGCCAGGAGCCTTACGCCTGGCTGCGCCACATCCTCGAACGCCTGCCGGCCGCCAATAGCGTCGAGGATTACGAAGCGCTGCTGCCGTGGAATTGCTCGCCAGTGAGCGCATCCTGA MIAVPAPLPDDPILLKHLLLLASEQAAAKDARIEQLQEQVALLRHKLFSPKSERSPEDADSPQLAMFNEVEELIEAAAAPSEAEAEAEAEAEAEAEEIVAPVKRRGKRKPLPANLPRVEVIHDLPEHELTCACGACKQVIGEETSEQLEIIPMQVRVIRHIRKTYACKACEAAPLTADKPAQLIEKSLASPSVLAMLLTTKYADGIPLYRFEKMLSRHGVDIPRQTLARWVIQSGEQLQPLLNLLRDKLLEYPVLHCDETRLQVLHEPGRDPTAQSWMWVQSGGPPDKPVILFDYTASRAQEVPLRLLDGYRGYLMTDDYAGYNAVAAQEGIERLGCWAHARRKFVEAQKVQPKGKTGRADMALNLINKLYGIERDLKDACDTERLVARQQRSQPLLDQLKTWLDKTQPQVVGQTALGRAVNYLASNWRKLVRYVEGGHLPIDNNRAENAIRPFVIGRKNWLFSDTPKGATASAQIYSLIETAKANGQEPYAWLRHILERLPAANSVEDYEALLPWNCSPVSAS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0037 CDS 35052 35411 - IS66 Orf2 family protein YP_001185543 146305078 5106711 PFAM: IS66 Orf2 family protein Cytoplasmic[Class 3] PF05717|Transposase_34, IS66 Orf2 like protein|10|116|5e-32 ATGATGCGTCCCGACGCCAAGGTGCAGAAGGTCTACCTCTACCCAAAACCCGTCGATTTCCGCAAATCCATCAACGGCCTGGCCGCTCTGGTCGAGCTGGACATCAAGGTGGAAGTGTTCAACCCCGTGCTGTTCGTGTTCCTCAACCGCACCCGCAGTCAGGTCAAGATCCTCTACTGGGAGCGCAATGGCTTCTGCCTGTGGCTCAAGCGTTTGGAAGCCGAACGCTTCAAGACCAAGCCCGATGCCGGCGACGAGGCCATCGAGCTGACGGTCGATGAGTTGAACTGGCTGCTCGACGGCATCGACCTGTGGCGCAACCGTCCGCACCAGATACTGACGCCGCGTTTCGTGACCTGA MMRPDAKVQKVYLYPKPVDFRKSINGLAALVELDIKVEVFNPVLFVFLNRTRSQVKILYWERNGFCLWLKRLEAERFKTKPDAGDEAIELTVDELNWLLDGIDLWRNRPHQILTPRFVT Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0038 CDS 36171 37328 + type III secretion effector delivery regulator, TyeA family YP_001185544 146305079 5106712 TIGRFAM: type III secretion effector delivery regulator, TyeA family Unknown[Class 3] TIGR02511|type_III_tyeA|type III secretion effector delivery regulator, TyeA family|equivalog_domain|8.1e-28||No Data|No Data ATGATCAGACCTATCCCCAACGCCAGCTCGATCCTGCACATACCGTCTGTCGCCCGTGCAGCATCCCCTGCCACTCCCCTTGCGCAGGTTCGGTCAGGTGCTGCGACCACCACTGGCACGAGTGCCCAGCAAGCCTCGAAATTCGCCGCCGCGCTGGTACAGAACAGCCGCGAGTTGGGGCGTCGTGATCTGTTCGCCAAGATCAATGCTCTGCAATCCCAGGCAAGCAAGCAGCATGAGTTGGCCCACCTGCTGCTGGCGACCCATGAACGGGGCATGGAGGAGTCGGCTCGTGCACTGCGCAAGACGCTGAAGAACGGCCAACTGCTGCGAATGGAGCGGGGCAAGCTGCTCAAGCAGATCGTCGACAGCATGGCGGGCGATGCAGCCAAGGCCCATGCCCTGTTGCAGGCGGCGGCTCGACAGGCCAAGGGCGAGAAGTCGCTCAATGAACAGCAGGCGCTGAATCAGCAACTCCAGCTCTTGCGGCAACAGCATGGGCGCAATCCCCGGCCTCTGTTCAATACGGGTAACAACACCAGGATCCTGGCGCGCGGAGGCGAGGATCCTCAGCGGCGAGACAAGCTGCGCAGCCTCTACAGCGTTGCGGTGACCGAACAGCTGAACGTGGTCGGGCTGATCGAGGCTCTGCTGAATAGCACCCAGGACGATGGGCAGAAGGATGGCCGCGAAGGCTTCGAAGCCGTCCTGCGCGAGATCCGCCAGGTCGTGGCGCGCGACATGGCGGAACTCGATGGCAGCGCATCACCACAGAAACTGCGAACCATGATGTACGCCATGAGTACGGCGCAGTACGTGGCAACCCTGTTCGGTGGCTGCGAACACCTGCTGGGCCGCATGCGCAACAAGAATCCCGCCATGCAGGTTGAGACCTCGGCGTTTCTCAAGAACCTGCTGGGGCTGATCGGCAAGGGCATGGCGCTGAACGACACCCTTCAGCTGACGCAGCAGATCGGCGGTCGGCAACTCAAGCACCAGCTGGCGTTCCTCAACGGGCTGCGCCCGATGCTGCATCAGCTGCCAATCATGCTATGGCGCGACATCAAGAGCCGACAGAACGCGCTGGGTAATCTGCTCTCGCTGATGGCGGCGTTGACCAGTGAAGAGCAGAAGCGCCTCAAGGAGGGCATCGCCTGA MIRPIPNASSILHIPSVARAASPATPLAQVRSGAATTTGTSAQQASKFAAALVQNSRELGRRDLFAKINALQSQASKQHELAHLLLATHERGMEESARALRKTLKNGQLLRMERGKLLKQIVDSMAGDAAKAHALLQAAARQAKGEKSLNEQQALNQQLQLLRQQHGRNPRPLFNTGNNTRILARGGEDPQRRDKLRSLYSVAVTEQLNVVGLIEALLNSTQDDGQKDGREGFEAVLREIRQVVARDMAELDGSASPQKLRTMMYAMSTAQYVATLFGGCEHLLGRMRNKNPAMQVETSAFLKNLLGLIGKGMALNDTLQLTQQIGGRQLKHQLAFLNGLRPMLHQLPIMLWRDIKSRQNALGNLLSLMAALTSEEQKRLKEGIA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0039 CDS 37328 39412 + type III secretion protein, HrcV family YP_001185545 146305080 5106713 TIGRFAM: type III secretion protein, HrcV family PFAM: type III secretion FHIPEP protein Cytoplasmic Membrane[Class 3] TIGR01399|hrcV|type III secretion protein, HrcV family|subfamily|0||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00771|FHIPEP, FHIPEP family|29|674|0.0 COG4789|EscV, Type III secretory pathway, component EscV [Intracellular trafficking and secretion]. ; COG4789|EscV, Type III secretory pathway, component EscV [Intracellular trafficking and secretion]. ATGGGAGCGGTCATCGATTTTCTGAACGGTATCGCGCTGGCTGCCATGCGCCGCTCGGAGATCGTCGGCGCCTTCGTGGTCATCGCCATCATCTTCATGATGATCACGCCGATGCCCACGGAGCTGATGGATGTGCTGATCGCGATCAATATCTGCATTTCCTGCCTGATGATCATGCTGGCCATGCATCTGCCCCGGCCCCTGGCGTTCTCGACGTTTCCGGCGGTGCTGCTGCTGACCACCATGTTTCGCCTGGCCCTGTCGATCTCCACCACGCGCCTGATCCTGCTCGAGCAGGACGCCGGGCACATCGTCGAGGCATTCGGCGAGTTCGTCGTGGGTGGCAACCTGGCCGTCGGCGTGGTGATATTCCTGATCCTGACCATCGTCAACTTCCTCGTCATCACCAAGGGCTCGGAGCGGGTGGCGGAGGTCGGCGCGCGCTTTACCCTGGACGCCATGCCCGGCAAGCAGATGTCCATCGACAGCGATCTGCGCGCCAACCTCATTTCGGTGAGCGAGGCGCGTAACCGCCGGGCCGAACTGAACAAGGAAAGCCAGCTGTTCGGCGCCATGGATGGGGCGATGAAGTTCGTTAACGGCGATGCGATCGCCAGCCTGATCATCATCGCCATCAACATGATCGGCGGTATGGCCATCGGCGTGGCGCAAATGGGGATGAGCGCGGGCGATGCCTTGCAGGTGTACACCATCCTCACCATTGGTGATGGCCTGGTTTCGCAGATCCCGGCGCTGATGATTTCTGTCACCGCCGGTATCGTCATCACCCGGGTGCCCAACGAGCAGAGGCAGCAGACCAACATCGGCCGGGAGATCGCCGAGCAGCTGACCAGTCAGCCCAAGGCCTGGATCATCGCCTCGGTGGCCATGCTCGGTTTCGCCGCATTGCCGGGCATGCCCACCCTGACCTTCATCATCATCGCCATCATCTGTGGTTGCGGCGGCTTGTTGCAGTTGCAACGTGCGCGTACTTCCAGTGCGGCGGAGGATGATCCGGAAGTCATCCCTCCGGAGATGAATGGTCAGGAGGACCTGCGTACCTTCTCGCCAAGTCGTCAGTTCGTGCTGCAATTTCATCCCAGCCAGGATGCGCATCAGGTCGCGGCCCTGCTCAGCGAGATTCGCCAGCGGCGCAACAGGCTGGTGGTGCAGTACGGCCTCACGTTGCCCTCGTTCATCATCGAACAATCGCCGCTCCTGCCTCCGGACGAATTCCGTTTCTCGGTTTACGAGGTGCCTCTGTTCAAGGCCACGCTGACGCAAAGCCAGTTGGCCGTGCCCGCACGCAGTCTGCCACCGGGGGCTGTTTGCGGTTCCAACGAGCGTCAGGAGGAAGACTGGGTATGGATGCCGGCCGATGATCCCATGCTGCAGAACGACGAGTTGGAGATCGTCAGCGCCGCGACGCTGATCGTCGAGCGCATGGAGCGTGCCATGCAGGCCTGCGGGCCGCAGTTCATCGGCTTACAGGAAACCAAGGCGATCCTCGGCTGGCTGGAATCGGAGCAGCCCGAGCTTGCCCAGGAAATGCAGCGGGTACTGCCCTTGGCCAGGTTTTCCGCGATTCTCCAGCGTCTGGCCGCCGAATGCGTGCCGCTGCGCTCCGTTCGCCTGATCGCGGAGACCCTGATCGAGCACGCCCAGCACGAGCGAGATGTGACTGTGCTGACCGACTACGTACGCATCGCCCTCAAGTCGCAGATCTACCACCAGTACTCGAGCGCGGAGGGCTTGCTGGTGTGGCTGCTGACCCCGGAAAGCGAAGGCATCCTGCGTGACGGCTTGCGTCAGACCCAGACCGAGACCTTCTTCGCCCTGAACCATGAAACCAGCCAGCTACTGCTGCAACAACTGCACATGGCCTTTCCGATGCGGGCGCCTGAGCAGGCGGTGCTGCTGGTGCCGCAGGATCTGCGCAGCCCACTGCGCACGCTGCTGCAGGAGGAGTTTCACCATGTGCCGGTGCTGTCCTTCGCTGAAATCAGCAGCGCTGCTCGGATCAAGGTAATGGGTCGATTCGACCTGGAAGAGTCGGTGGCGCTGGACAATGACTACGCCGCTTGA MGAVIDFLNGIALAAMRRSEIVGAFVVIAIIFMMITPMPTELMDVLIAINICISCLMIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTTRLILLEQDAGHIVEAFGEFVVGGNLAVGVVIFLILTIVNFLVITKGSERVAEVGARFTLDAMPGKQMSIDSDLRANLISVSEARNRRAELNKESQLFGAMDGAMKFVNGDAIASLIIIAINMIGGMAIGVAQMGMSAGDALQVYTILTIGDGLVSQIPALMISVTAGIVITRVPNEQRQQTNIGREIAEQLTSQPKAWIIASVAMLGFAALPGMPTLTFIIIAIICGCGGLLQLQRARTSSAAEDDPEVIPPEMNGQEDLRTFSPSRQFVLQFHPSQDAHQVAALLSEIRQRRNRLVVQYGLTLPSFIIEQSPLLPPDEFRFSVYEVPLFKATLTQSQLAVPARSLPPGAVCGSNERQEEDWVWMPADDPMLQNDELEIVSAATLIVERMERAMQACGPQFIGLQETKAILGWLESEQPELAQEMQRVLPLARFSAILQRLAAECVPLRSVRLIAETLIEHAQHERDVTVLTDYVRIALKSQIYHQYSSAEGLLVWLLTPESEGILRDGLRQTQTETFFALNHETSQLLLQQLHMAFPMRAPEQAVLLVPQDLRSPLRTLLQEEFHHVPVLSFAEISSAARIKVMGRFDLEESVALDNDYAA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0040 CDS 39429 40343 + type III secretion apparatus protein, YscD/HrpQ family YP_001185546 146305081 5106714 TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family Unknown[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR02500|type_III_yscD|type III secretion apparatus protein, YscD/HrpQ family|equivalog|4.7e-19||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis ATGTACGAACTGAGGGTATTGACCGGCCTGCACAAGGGCGCCGCACTGCCACTGATCGGTGAGCAATGGCTCATCGGTGCCGAAGAGGGTCGTGATCTGGCGTTGCACGATCCAGGGGTGGAAACCCTTCACTGCCGCTTGCAGCGGGCGGGCGACAGCTGGCAGTTGCTGGCCGAGGAAGGGGCCGTGCTCGACGGGGAGGGACACTCCCATGCGTCGATGGAAGTACTGCTTGATTGCCCACTCGTGCTCGGCTCCGTCTGGGTGTACCTGGCCGCCGCTGAGTCACCCTGGCCAACGTTGCCGGCACTCGTCGGTCATCCCGGCGAAGACGGCGACAGCAAGGCCTCTGCGGAGGTCGGGGAACGAGGCCGTGTGCGTCTGCTCAATCGCGGCACCGGCATAGCGCTTGGCGTCTTGCTGGGCGTCATGGGCAGCGCCTGGAGCCTGAGTTGGCCGGTTGGCTCCGCTTCGGGACCTGCGGCGGTGCCGACGAGCGAGCCTGCCGCGGTTAGCGATGGCCGCACCCTATTGCAGAAGGACGAGGCGGTGCGCGTGCTCAAGCAGATGCTGAGTGAACGCCTGCTGACGGCCGTCTCGGTCGAGCCGAATGAGCAAGGTGTGGCGCTCATGGGCTCGCTGCAGGGCGAAGGCATGCTGGTCTACGAACGCATGCTGCAACGTTTCGAGAAGGACTATGAAACGGATTTCGTGTTGCAGGACCAGGTTTCAAGTGGTGCCGCAGGGCTGCCATTCGTGATCGTGCAGATCATTGCCGGCCCGCGTGGGCACCTGGTGATGGAGGATGGCCGGCGCTTGCATGTCGGCGACAAGCTGGACGGCCTGCGCCTGGTACGCATCGATAACGAGCGCATCCTGTTCGATGGTGTCCGCCGTTATGAGGTGGCCTGGTGA MYELRVLTGLHKGAALPLIGEQWLIGAEEGRDLALHDPGVETLHCRLQRAGDSWQLLAEEGAVLDGEGHSHASMEVLLDCPLVLGSVWVYLAAAESPWPTLPALVGHPGEDGDSKASAEVGERGRVRLLNRGTGIALGVLLGVMGSAWSLSWPVGSASGPAAVPTSEPAAVSDGRTLLQKDEAVRVLKQMLSERLLTAVSVEPNEQGVALMGSLQGEGMLVYERMLQRFEKDYETDFVLQDQVSSGAAGLPFVIVQIIAGPRGHLVMEDGRRLHVGDKLDGLRLVRIDNERILFDGVRRYEVAW Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0041 CDS 40340 41698 + ATPase, FliI/YscN family YP_001185547 146305082 5106715 TIGRFAM: ATPase, FliI/YscN family PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region Cytoplasmic[Class 3] biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA ; molecular_function|GO:0046961|hydrogen ion transporting ATPase activity, rotational mechanism|IEA TIGR02546|III_secr_ATP|type III secretion apparatus H+-transporting two-sector ATPase|equivalog|5.9e-246|3.6.3.14|Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00006|ATP-synt_ab, ATP synthase alpha/beta family, nucleotide-binding domain|157|367|5e-74 COG1157|FliI, Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]. ; COG1157|FliI, Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]. GTGAATGCTCCTGCCACCGAGCTGCAGGAATGGGTACGTTTTCAGGCTGCTCGGCTGGGCACGTTGTCGGCGGTGCAGGTCAGCGGCCGGGTGAGCGCCGTCAGCGGCATCCTGCTGGAGTGCCAGGTGCCAGCCGCCAAGGTGGGCGAGTTGTGCGAGGTGAGCAAGGCCGATGGCAGCAACATGCTGGCCGAGATAGTCGGCTTCACGCCTGACTGCACCCTGCTCAGCGCACTGGGCACGCCGGACGGCATCCAGGTTGGAGCGACCATTCGCCCTCTGGGCATTGCCCATCGTATCGGTGTCGATGACAGCCTGCTTGGCAGCGTGCTGGATGGTTTCGGCCGGCCGTTGCTGGGCCAGGCGCAGGGGGCTTTCGCCGGCCCTCATGATGCTCGGCAGACGCTACCGGTGATAGCCGATGCGCTGCCACCGACGCAACGTCCGCGTATCACCACTGCCCTGCCGACCGGTATTCGCTCCATCGACAGCGCCATGCTGCTGGGCGAGGGGCAGCGGGTGGGCCTGTTCGCCGGGGCCGGCTGCGGCAAGACCACGCTGATGGCGGAACTGGCCCGCAATATGGCCTGCGATGTGATCGTGTTCGGCCTTATTGGCGAACGTGGCAGGGAACTGCGTGAGTTCCTCGACCACGAACTGGACGACACCCTGCGCAAACGCTCGGTGCTGGTCTGCGCGACGTCCGATCGTTCCAGTATGGAGCGGGCTCGCGCAGCCTTTACCGCCACGGCCATCGCCGAGGCATACAGAGCCAGAGGCCTGAAGGTATTGCTGTTGATCGACTCACTGACCCGTTTCGCCCGCGCCCAGCGTGAAATCGGTATTGCCGCCGGCGAGCCGCTTGGGCGTGGCGGCTTGCCTCCTTCGGTCTACACCTTGCTGCCGCAACTGGTCGAGCGTGCCGGAATGAGCGAGAGCGGCTCGATCACGGCGTTGTACACCGTGCTCATCGAGCAGGACTCGATGAACGACCCGGTGGCCGACGAGGTGCGTTCGTTGCTCGATGGACACATCGTGATGTCGCGCAAGTTGGCCGAGAAAGGCCACTACCCGGCCATCGACGTGCCGGCCAGCATCAGTCGTGTACTCAGCAATGTCGCCCCCCGCGAGCATCAGCGTGCCAACAATCGGCTGCGTCGCCTGATGGCGGCCTATCGACAGGTGGAGATGCTGTTGCGTCTTGGCGAGTACCAGCCAGGCACCGACCCGGTGACGGATTGCGCCGTACAGCTGCATGAGCCGATCAATGCCTTCCTGCGTCAGGACCTGCGCGAGCCTTCGCCGTTGCCGGTGACCCTTGAGGCCCTGATGCAACTGACCGCGGCGCTTCCGGAGTGA MNAPATELQEWVRFQAARLGTLSAVQVSGRVSAVSGILLECQVPAAKVGELCEVSKADGSNMLAEIVGFTPDCTLLSALGTPDGIQVGATIRPLGIAHRIGVDDSLLGSVLDGFGRPLLGQAQGAFAGPHDARQTLPVIADALPPTQRPRITTALPTGIRSIDSAMLLGEGQRVGLFAGAGCGKTTLMAELARNMACDVIVFGLIGERGRELREFLDHELDDTLRKRSVLVCATSDRSSMERARAAFTATAIAEAYRARGLKVLLLIDSLTRFARAQREIGIAAGEPLGRGGLPPSVYTLLPQLVERAGMSESGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVMSRKLAEKGHYPAIDVPASISRVLSNVAPREHQRANNRLRRLMAAYRQVEMLLRLGEYQPGTDPVTDCAVQLHEPINAFLRQDLREPSPLPVTLEALMQLTAALPE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0042 CDS 41701 42147 + hypothetical protein YP_001185548 146305083 5106716 Cytoplasmic[Class 3] ATGGAAGACGAGCTGGAAGCCGATCCGCAACGCCTGGCCCTCGAACAGGCCATTCAAGTGCTCAGGCCCCTGCGCCAGCACCGCCAGGCAAGTGCCGAGCGGCAGCAGCGGCAGATGCAGCAGACGCTTGCCAGCAGCCGTGAACGTTTGGCGGAAACCCGTGAACGGCTGGGCAGCGAGCGCCAGGCGCAATTGGCACGTCGCGAGGCACTGGCGCAGCAACACGTGGATCGTTGCCTGAGCCTGGATGAAGTCGAGCTCTGGCACAACCAGGAGCGGGCGATGCTCGATCGCCTGGCGCACATGCGTCAGGACATTCACCGGCAGGGCCTGGCGATCGAGCAGCAACAACATCAACTGCAGGTCATGCAGGCTCAAGCCAAGGCGGCTCAGCGTGCGGTGGAAAAACTGTCCTGCCTGGCCGAGGCGATCAACGATGAAAACTGA MEDELEADPQRLALEQAIQVLRPLRQHRQASAERQQRQMQQTLASSRERLAETRERLGSERQAQLARREALAQQHVDRCLSLDEVELWHNQERAMLDRLAHMRQDIHRQGLAIEQQQHQLQVMQAQAKAAQRAVEKLSCLAEAINDEN Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0043 CDS 42137 42673 + hypothetical protein YP_001185549 146305084 5106717 Cytoplasmic[Class 3] ATGAAAACTGAACACGCAGCGCGCCCTCAGCTGATGCAAACCCTGCAGCAGGGTGCAGCCCCACAGGGCAACCTGGCTGCACTCAAGGAGACGGGCTGGTCACGACGCAGCGATTTCGAGTCGAGCCTGTCGAGTTGGTCGAACAGCGCAGTGCCCACCCTGGCCGATGGGCAGCTGTTCGCCCAGTTGATTCAGCCCGTTCATTCAGGTGGCGATCAATCCGGTTTTGGCGGCAGCGGCGTTGCATCGTTTCAGGCTCGGCCCGATGGCATGGCGGGAGAGCTGGTCGATGAGCTGACGCAGCGTCTACCCAGCCTGCCGAGCGGCCCGATCAACGTCACCCTGTTGATGCCGAACCTGGGCCGGGTACAGGTGCGCGCGGGCAAGCGCGACCAGCAACTGGAAGTGGAGCTGGGCTTCGAGCGGCAGGATGTGCTGGAGCGTCTGCGCGCGCAGGAACGCACCTGTGAAAGCGCGTTGGGCGAAGCGCTTGGTCAGCCTGTGCGCTTATGGATGCGTGAAGAGGCGAGCGTATGA MKTEHAARPQLMQTLQQGAAPQGNLAALKETGWSRRSDFESSLSSWSNSAVPTLADGQLFAQLIQPVHSGGDQSGFGGSGVASFQARPDGMAGELVDELTQRLPSLPSGPINVTLLMPNLGRVQVRAGKRDQQLEVELGFERQDVLERLRAQERTCESALGEALGQPVRLWMREEASV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0044 CDS 42670 43386 + hypothetical protein YP_001185550 146305085 5106718 Unknown[Class 3] ATGACGCCGCTGGCCCTGGGCGCGATCTCCAGCGTATTGGCCCAGGCCTCACGTGCGCTGGGTGCCGGCGTCACACTCAACTTCCGGGCCCGTGGTCATGACGGCGAGCTGAAACTGCTGCCCATGCTCCCTAATGCGCCGTCGCGGGCCGGAACCTGGCTGCATACGAATGTCGGGCCGCTGTGTCTGGGCGACGCTGGGGCGGTGTTGAGTCTGCTGGGTGAGCTGCCGGTTACGTGCGAAGGCGATGACCAGCCCTGGTACTGGCAACTGATCAGTCAGCGCCTCAGTCAGGGTGTTGCGGGTGCCTTGGGGGCGATCAGCCCTTTGGACGGGGATGCTCCAGCGGGCGCGCTGCTGCATGCCCAACTGCACGTTCGCCTGGGCGATGAACGAGTGCAGGCTCAACTCGCCGCACCACCGGAAACCTGGCTGAACTGGCTGCAGGCGCCTGAATGGCAACGCATCAGGACAGCGCTGCACGAGGCTCTGGTGTTGCACATTCCTCTGCAACTGGGGCAGCTGGAGCTCAGCGCCGAGCAATTGGCCTCACTGCAACCCGGCGACATCGTGCTGCCTGCCCAGGCCAGCTTCACCTGCGACGGCAGCGGTCATCTGGCATTGGCCAGCCGGTATTGGGCGGCCCAGGTGAGCAGTCGTGGCGAAAAACTCTTCCTGAATCTGCGTCACGAGGAAAGCAGCCAGCATGAGCACTGA MTPLALGAISSVLAQASRALGAGVTLNFRARGHDGELKLLPMLPNAPSRAGTWLHTNVGPLCLGDAGAVLSLLGELPVTCEGDDQPWYWQLISQRLSQGVAGALGAISPLDGDAPAGALLHAQLHVRLGDERVQAQLAAPPETWLNWLQAPEWQRIRTALHEALVLHIPLQLGQLELSAEQLASLQPGDIVLPAQASFTCDGSGHLALASRYWAAQVSSRGEKLFLNLRHEESSQHEH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0045 CDS 43376 43777 + surface presentation of antigens (SPOA) protein YP_001185551 146305086 5106719 PFAM: surface presentation of antigens (SPOA) protein Cytoplasmic[Class 3] TIGR02480|fliN|flagellar motor switch protein FliN|equivalog_domain|7.7e-05||Cellular processes|Chemotaxis and motility PF01052|SpoA, Surface presentation of antigens (SPOA) protein|61|129|1e-13 COG1886|FliN, Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]. ; COG1886|FliN, Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]. ATGAGCACTGAACATCTATCCCAGGAAAGCTTGCAGGAGATGGCGGAAATGGATGCTGATGCGCTGCCTGAGGGTTTCGAGGAACGACCTGGCGAAATGCATCTGGAAGGTCAGGAGTTCGCGCCGCAGGACGAGCACGCGAGTGCCGTCGAGCCCCAGCAGATGGCGGCGCTTGGCAGCATCGCGCATTTGCCGCTGCAGCTTACCCTGCGCTGCGGCCAGTTGACCTTGAGCGTCGATCAACTGCGGCAGCTGGGCAGCGGCAGCGTTCTCGAGATCCATGGGGTCGCCCCTGGCCATGCCACCCTTTGCCATGGTGAGCGTGTGGTGGGTGAGGGAGAGTTGGTGGATGTCGATGGGCGGCTGGGTCTGCAGATCACCCGGATGGCGACGCTGTCATGA MSTEHLSQESLQEMAEMDADALPEGFEERPGEMHLEGQEFAPQDEHASAVEPQQMAALGSIAHLPLQLTLRCGQLTLSVDQLRQLGSGSVLEIHGVAPGHATLCHGERVVGEGELVDVDGRLGLQITRMATLS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0046 CDS 43774 44427 + Yop virulence translocation R YP_001185552 146305087 5106720 TIGRFAM: Yop virulence translocation R PFAM: type III secretion system inner membrane P protein Cytoplasmic Membrane[Class 3] biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA TIGR01102|yscR|type III secretion apparatus protein, YscR/HrcR family|equivalog|1.7e-129||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00813|FliP, FliP family|14|213|7e-60 COG4790|EscR, Type III secretory pathway, component EscR [Intracellular trafficking and secretion]. ; COG4790|EscR, Type III secretory pathway, component EscR [Intracellular trafficking and secretion]. ATGATTCTGGACGGAATGAACCCCATCATGCTGGCGCTGTTCCTTGGCGCCCTGTCGTTGATTCCCTTCCTGCTCATCGTCTGCACGGCATTTCTCAAGATCGCCATGACGCTGATGATCACCCGTAACGCCATTGGCGTGCAGCAGGTTCCACCGAACATGGCGATCTACGGTATCGCCCTGGCGGCGACCATGTTCGTGATGGCGCCGGTTGCCTACGAAATCCAGAACCGACTCAGTGACAACCCCCTGGACCTGTCGTCCACGGACAGTCTCCAGGCCAGTGCCGGCAACGTGGTGGAGCCGTTGCAGGACTTCATGGTGAACAACACCGACCCGGACATCGCCACGCATCTTCTGGAAAACACCCAGCGCATGTGGCCCAGGGAAATGTCCGAGAAGGCCAGCAAAAGCGACCTGCTGCTGGCGATTCCGGCGTTCGTGCTGTCCGAGCTGCAGGCTGCGTTTCAGATCGGTTTTCTGATCTACATCCCGTTCATCGTGATCGACCTGATCATTTCCAATCTGCTGCTGGCGCTGGGCATGCAGATGGTGTCGCCGATGACCATCTCGCTGCCGCTGAAGCTGTTGCTGTTCGTCCTGGTGGACGGCTGGACGCGGCTGCTCAACAGCCTCTTCTACTCCTATATGTGA MILDGMNPIMLALFLGALSLIPFLLIVCTAFLKIAMTLMITRNAIGVQQVPPNMAIYGIALAATMFVMAPVAYEIQNRLSDNPLDLSSTDSLQASAGNVVEPLQDFMVNNTDPDIATHLLENTQRMWPREMSEKASKSDLLLAIPAFVLSELQAAFQIGFLIYIPFIVIDLIISNLLLALGMQMVSPMTISLPLKLLLFVLVDGWTRLLNSLFYSYM Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0047 CDS 44435 44698 + type III secretion protein, HrpO family YP_001185553 146305088 5106721 TIGRFAM: type III secretion protein, HrpO family PFAM: export protein FliQ, family 3 Unknown[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR01403|fliQ_rel_III|type III secretion protein, HrpO family|subfamily|8e-33||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01313|Bac_export_3, Bacterial export proteins, family 3|1|76|4e-14 COG4794|EscS, Type III secretory pathway, component EscS [Intracellular trafficking and secretion]. ; COG4794|EscS, Type III secretory pathway, component EscS [Intracellular trafficking and secretion]. ATGGAGGCGTTGGCGCTGTTCAAGCAAGGCATGTTCCTGGTGGTTATCCTGACTGCACCGCCATTGGCCGTGGCGGTGCTGGTCGGGGTGACGACATCGCTGGTACAGGCGCTGATGCAGATGCAGGATCAGACGCTGCCGTTCGGTTTGAAACTGGCTGCCGTCGGCCTGACCCTGGCGATGACCGGACGCTGGATCGGCCTGGAGTTGATTCAGTTCACCAATATGGCGTTCGACCTGATTGCCCGCTCAGGGGGCAATTAG MEALALFKQGMFLVVILTAPPLAVAVLVGVTTSLVQALMQMQDQTLPFGLKLAAVGLTLAMTGRWIGLELIQFTNMAFDLIARSGGN Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0048 CDS 44699 45499 + type III secretion protein SpaR/YscT/HrcT YP_001185554 146305089 5106722 TIGRFAM: type III secretion protein SpaR/YscT/HrcT PFAM: type III secretion system inner membrane R protein Cytoplasmic Membrane[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR01401|fliR_like_III|type III secretion apparatus protein SpaR/YscT/HrcT|equivalog|7.6e-94||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01311|Bac_export_1, Bacterial export proteins, family 1|6|255|9e-43 COG4791|EscT, Type III secretory pathway, component EscT [Intracellular trafficking and secretion]. ; COG4791|EscT, Type III secretory pathway, component EscT [Intracellular trafficking and secretion]. ATGCCATTGGATGCCCAGGCCGCTTTCGAGCTGATGCTGGGGCTAGGTCTCGGCGTGGCCCGCCTGCTGCCCTGCATGCTGCTGGTGCCTGCATTCTGTTTCAAACACCTCAAAGGCATTCTGCGTTATGGCGTGGTGATCGCCGTGGCGATGATCCCGGCCCCTTCGATCGGCGAGGCCCTGGCCAGTGAGGGGGCCAGTTTCGGCGTGGTCATGGGGCTGCTGATCAAGGAGGTCATGCTCGGTGCGCTGCTTGGCGTGTTGCTGCACATGCCGTTCTGGATGTTCGCCTCGGTCGGCGCTTTGCTCGACAGTCAGCGTGGTGCTCTCAGTGGTGGTCAGCTCAACCCGGCGCTCGGCCCGGACGTGACGCCGATGGGCGAGCTGCTGCAGGAAGTGCTGGTAATGCTGGTCATTCTGTTCGGCGGGTTACCTTTGATTACCCAGGTGATCTGGGACAGCTACTTGATCTGGCCGCCCACGGTCTGGCTGCCGATCCTGACCGAGGACGGCCTGGGCGTGCTGCTCTCGCAACTCAGCCGAACGTTGCAGCACATGCTGCTCTATGCCGCGCCCTTCATTGCCCTGCTGCTGCTGATCGAGGCGGCCATGGCGATCATCAGTCTGTATGCGCAACAACTGAACGTATTCATCCTGGCAATGCCGGCCAAGAGCATTGCCGGGCTGGCTTTCTTGCTGATCTATCTGCCCACGCTTCTCGAACTGGGTGGTGGGGAGGTTCAGCAGTTTCAGCTTCTCAAGCAACTGCTGGGCAGCCTCGTCCAGGTGCCGGTGCCATGA MPLDAQAAFELMLGLGLGVARLLPCMLLVPAFCFKHLKGILRYGVVIAVAMIPAPSIGEALASEGASFGVVMGLLIKEVMLGALLGVLLHMPFWMFASVGALLDSQRGALSGGQLNPALGPDVTPMGELLQEVLVMLVILFGGLPLITQVIWDSYLIWPPTVWLPILTEDGLGVLLSQLSRTLQHMLLYAAPFIALLLLIEAAMAIISLYAQQLNVFILAMPAKSIAGLAFLLIYLPTLLELGGGEVQQFQLLKQLLGSLVQVPVP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0049 CDS 45496 46575 + type III secretion protein, YscU/HrpY family YP_001185555 146305090 5106723 TIGRFAM: type III secretion protein, YscU/HrpY family PFAM: type III secretion exporter Cytoplasmic Membrane[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR01404|FlhB_rel_III|type III secretion protein, YscU/HrpY family|subfamily|1.7e-161||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01312|Bac_export_2, FlhB HrpN YscU SpaS Family|3|342|1e-101 COG1377|FlhB, Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]. ; COG1377|FlhB, Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]. ATGAGCGAAAAAACGGAGAAGGCGACGCCCAAGCAACTGCGTGATGCGCGGGAAAAGGGGCAGATTGCGCAGAGTCAGGACGTCAGCAAGCTGTTGATCCTGCTGATGGTCAGCGAAATCACCTGGAGCCTGGCCACGGAGAGCGTACAACGCCTGCAGCACCTGATGGCGCTTGCCATCAATGCGACCGGGCAGCCGTTTCTGCGGATTGTGGGGCAACTGGTCGACGAGGCCGTGACCGTATTGCTCGGCTTCCTGATCTTCAGTGTCGGTGTCGCCATGGTGATGCGTCTGGCCGGAGGCTGGGCTCAGTTCGGGTTTCTCTTCGCACCCAAGGCACTGAAGATCGATTTCAACAAGCTCAATCCGTTTCCCCAGCTCAAGCAGATGTTCTCTGCGCAGAACCTAACCAACTTGCTGATGAGCATCCTCAAGGCTGCAGTCATCGGCATCACGCTCTACGTTCTGCTCTGGCCAGAGCTGGGTACATTGATCCTGCTGGCCAACTCCGACCTGGATACCTACTGGCAATCGTTGATGGAGGTGTTTCGCTACATCCTGCGCTGCACCCTGGGTCTACTCCTGGTGCTGGCTGCAGTGGATTTCGGCCTGCAGAAATACTTCCATGCCAAGAAACTGCGCATGAGCAAGGATGACGTGAAGAAGGAGTACAAGCAGTCGGAGGGCGACCCGATGGTGAAGGGGCAGCGACGCCAACTGGCGCACGAACTGCTCAATCAGCCGCCTTCGACCGCGGCAAGGCCAGTGGAGGAGGCCGATATGCTGGTGGTTAACCCGACCCACTATGCCGTGGCCCTGTACTACCGTCCGGGCAAGACACCCTTGCCGATGATTCACTGCAAGGGCGAGGACGAAGACGCATTGGCCCTGATCGCGCGGGCCAAGAAAGCCAGGATTCCCGTGGTGCAGAGCGTCTGGCTCGCGCGCACCCTGTACAAGGTCAATGCAGGACGCCATATCCCCCGTCCGACCCTGGAGGCTGTCGCCCACATCTATCAGTTGGTGAAACAGCTGGACGAGGTGACCGACGAAATCATCCAGGCCGACTCCGGGCTCTGA MSEKTEKATPKQLRDAREKGQIAQSQDVSKLLILLMVSEITWSLATESVQRLQHLMALAINATGQPFLRIVGQLVDEAVTVLLGFLIFSVGVAMVMRLAGGWAQFGFLFAPKALKIDFNKLNPFPQLKQMFSAQNLTNLLMSILKAAVIGITLYVLLWPELGTLILLANSDLDTYWQSLMEVFRYILRCTLGLLLVLAAVDFGLQKYFHAKKLRMSKDDVKKEYKQSEGDPMVKGQRRQLAHELLNQPPSTAARPVEEADMLVVNPTHYAVALYYRPGKTPLPMIHCKGEDEDALALIARAKKARIPVVQSVWLARTLYKVNAGRHIPRPTLEAVAHIYQLVKQLDEVTDEIIQADSGL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0050 CDS 46762 47412 + hypothetical protein YP_001185556 146305091 5106724 TIGRFAM: conserved hypothetical integral membrane protein PFAM: protein of unknown function DUF165 Cytoplasmic Membrane[Class 3] TIGR00697|TIGR00697|conserved hypothetical integral membrane protein|subfamily|1.3e-52||Hypothetical proteins|Conserved PF02592|DUF165, Uncharacterized ACR, YhhQ family COG1738|37|187|2e-28 COG1738|COG1738, Uncharacterized conserved protein [Function unknown]. ; COG1738|COG1738, Uncharacterized conserved protein [Function unknown]. ATGACCCTGATTCCTGCGTCGGTCAGTCGGCCCGTGCTGGCCGGCCTGATCGCCTTCCATATCCTCATCATCATCGCCAGCAACTACCTGGTGCAGCTGCCGATCACCCTGTTCGGCTGGCATACCACCTGGGGTGCGTTCAGCTTCCCGTTCATCTTCCTGGCTACCGACCTCACCGTGCGTCTGATCGGCAAGCATGCCGCGCGGGTGGTGATCGCCCGCGTCATGCTGCCGGCGCTGGTCGCCTCCTACGTGGTGTCGGTGCTGTTCCATGAAGGCGTCTTCGGCGGCCTGGCGGTGCTGGGCGACTTCAACCTGTTCGTCTTCCGTATCGCCGTGGCCAGCTTCCTGGCCTATGCCTTCGGCCAGTTGCTCGATATCCAGGTGTTCGACCGCCTGCGCCAGATGCGCCAGTGGTGGATCGCGCCGACGGCCTCGACCATCTTCGGCAACCTGCTCGATACCTTCCTGTTCTTCTCGGTGGCCTTCTGGCGCAGCGACGATCCGTTCATGGCGGCCAACTGGGTGGAGATCGCCACGGTGGACTACGTGATCAAGCTGGCCATCAGCCTGATGCTCTTCGTACCGCTGTACGGCATGCTGCTCAGCGCCATCGTCCGCGCCCTGCCCCAGCGCCCGGCCACGGCCTGA MTLIPASVSRPVLAGLIAFHILIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLIGKHAARVVIARVMLPALVASYVVSVLFHEGVFGGLAVLGDFNLFVFRIAVASFLAYAFGQLLDIQVFDRLRQMRQWWIAPTASTIFGNLLDTFLFFSVAFWRSDDPFMAANWVEIATVDYVIKLAISLMLFVPLYGMLLSAIVRALPQRPATA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0051 CDS 47452 47766 - Tetratricopeptide TPR_2 repeat protein YP_001185557 146305092 5106725 PFAM: TPR repeat-containing protein Cytoplasmic[Class 3] COG3063|PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]. ; COG3063|PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]. ATGAGCACAGAAGCACTGGAAAAGATGCTGGCCAAGGGCATGGACAACGCCCTGCTGCGCTTCGGCCTGGGCAAGGCCCACCTGGATGCCGGCAACGCCGCCCAGGCTGCCGAGCACCTGCAACGCTGCGTGGAGTTCGACCCCGGCTATTCCGCTGCCTGGAAACTGCTGGGCAAGGCGCTGCAGGCCGAAGGCGACATCGAGGCAGCGCGCCGGGCCTGGCAGCAGGGCCTCAATGCCGCCCAGAGCAAGGGCGACAAGCAGGCCGAGAAGGAAATGAGCGTGTTTCTGCGCAAGCTGGACAAGGTGCGCTGA MSTEALEKMLAKGMDNALLRFGLGKAHLDAGNAAQAAEHLQRCVEFDPGYSAAWKLLGKALQAEGDIEAARRAWQQGLNAAQSKGDKQAEKEMSVFLRKLDKVR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0052 CDS 47855 49228 - TrkA-N domain protein YP_001185558 146305093 5106237 PFAM: TrkA-N domain protein Cytoplasmic[Class 3] PF02080|TrkA_C, TrkA-C domain|154|225|6e-08 COG0569|TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. ; COG0569|TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. GTGAAGATCATCATTCTCGGTGCCGGCCAGGTCGGCGGCACCCTGGCGGAGCACCTGGCCAGCGAGGCCAACGACATCACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTGGGCGACCGCCTCGACATCCGCACCGTACAGGGCAAGGGTTCCTTTCCCACCGTGCTGCGCCAGGCCGGCGCCGACGATGCCGACATGCTGGTGGCCGTGACCAACAGCGACGAAGTCAACATGATCGCCTGCCAGGTGGCCTACACCCTGTTCCACACCCCGACCAAGATCGCCCGGGTGCGCGAGTCGGCCTACCTGACCCGCGAGGCACTGTTCGACAACGAAGCGATACCGGTGGACGTGCTGATCAGCCCCGAGCAGGTGGTGACCAACTACATCAAGCGCCTGATCGAATACCCCGGCGCCCTGCAGGTGATCGACTTCGCCGACGGCAAGGCGCAGCTGGTCGCGGTCAAGGCCTACTACGGCGGTCCGCTGGTGGGCCAGCAACTGCGCCAGCTGCGCCAGCACATGCCCAACGTCGACACCCGGGTGGCCGCGATCTTCCGCCGCAACCGGCCGATCATGCCGCAGGGCGACACGGTGATCGAAGCCGATGACGAGGTGTTCTTCATCGCTGCCAAGGCCCACATCCGTGCAGTGATGAGCGAGATGCGCCGTCTCGAGGACAGCTACAAGCGCGTGGTGATCGCCGGCGGCGGCAATATCGGCGAGCGCCTGGCCGAAGCCATCGAGAGCCGCTATCAGGTGAAGATCATCGAGATGAACCCGGCGCGCTGCCGCTACCTGTCGGAGAACCTCGACAGCGCCATCGTGCTGCAGGGCAGCGCCTCGGATCGCGACCTGCTGGTGGAAGAGAACATCAACGACGCCGACATCTTCCTCGCCCTGACCAACGACGACGAGGCCAACATCATGTCGTCCTTGCTGGCCAAGCGCCTGGGCGCGCGCAAGGTGATGACCATCATCAACAACCCGGCCTACGTCGACCTGGTGCAGGGCGGCGAGATCGACATCGCCATCAGCCCGCAGCTGGCCACCATCGGCACCCTGCTGACCCACGTGCGCCGCGGCGATATCGAAAGCGTGCACAGCCTGCGCCGCGGCGCCGCCGAGGCCCTGGAGGTGATCGCCCACGGCGATGCCAAATCGAGCAAGGTCATCGGTCGCATGATCGAGGAAATCGCCCTGCCGCCGAGCACCACCATCGGCGCCATCATCCGCGACGAGGAAGTGCTGATCGCCCACGACGACACGGTGATCGAGTCCGGCGACCACGTGATCCTGTTCCTGGTCGACAAGAAGTACATCCGCGACGTCGAGCGCCTGTTCCAGGCCGGCCTGACGTTCTTCTGA MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGKGSFPTVLRQAGADDADMLVAVTNSDEVNMIACQVAYTLFHTPTKIARVRESAYLTREALFDNEAIPVDVLISPEQVVTNYIKRLIEYPGALQVIDFADGKAQLVAVKAYYGGPLVGQQLRQLRQHMPNVDTRVAAIFRRNRPIMPQGDTVIEADDEVFFIAAKAHIRAVMSEMRRLEDSYKRVVIAGGGNIGERLAEAIESRYQVKIIEMNPARCRYLSENLDSAIVLQGSASDRDLLVEENINDADIFLALTNDDEANIMSSLLAKRLGARKVMTIINNPAYVDLVQGGEIDIAISPQLATIGTLLTHVRRGDIESVHSLRRGAAEALEVIAHGDAKSSKVIGRMIEEIALPPSTTIGAIIRDEEVLIAHDDTVIESGDHVILFLVDKKYIRDVERLFQAGLTFF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0053 CDS 49240 50553 - sun protein YP_001185559 146305094 5106238 TIGRFAM: sun protein PFAM: Fmu (Sun) domain protein Unknown[Class 3] biological_process|GO:0000154|rRNA modification|IEA ; molecular_function|GO:0016434|rRNA (cytosine) methyltransferase activity|IEA TIGR00563|rsmB|ribosomal RNA small subunit methyltransferase B|equivalog|1.8e-139|2.1.1.-|Protein synthesis|tRNA and rRNA base modification PF01029|NusB, NusB family|1|125|8e-19 COG0144|Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ; COG0144|Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ATGAATCCACGTCTGGCTGCGGCGCGTGCCCTGACCGCCGTGCTGTCCGGCAAGGCCTCGCTGGGCAGCAGCCTGCCGCCGCAACTGGACAAGGTCGAACACCACGACCGCGCCCTGGCGCAGGACCTGGCCTTCGGCGCCGCACGCTGGCAACCGCGCCTGCAACTGCTGGCCGACAAGCTGCTGGAAAAGCCCTTCAAGGCCGCCGACAAGGATGTCGAGGCGCTGCTGCTGATCGGTCTCTATCAGTTGCTGCACAGCCGCATCCCCGAGCACGCCGCCATCGGCGAGACGGTCGGCTGCGCCGGCGCGCTGAAAAAGCCCTGGGCCAAGGGCCTGCTCAACGCCGTGTTGCGCCGCGCCCAACGCGAGCACGAAGCCCTGTTCGCAGAGCTGGATCGCGACCCGGTGCTGCACACCGCGCATCCACGCTGGCTGCAAAAACAGCTCAAGTCCTTCTGGCCAGAGTATTGGCAGGCCATCTGCGCCGCCAACAACGCCCATCCGCCGCTGATCCTGCGGGTCAATCGCCGCCATGGCAGCCGCGACGCCTACCTCGAGGAGCTGCGCGGCGCCGGCTTTGCCGCCGAACCTTGCACTTTCAGCCGCGACGGCGTGCGCCTGCTGCAGCCCTGCGACGTGACCGCACTGCCCGGCTTCCGGGAAGGCCGCGTCAGCGTGCAGGACGAGGCCGCGCAACTGGCCGCCGACCTGCTCGAGCTGGCCCCGGGTCAACGGGTGCTGGACGCCTGCGCCGCGCCCGGCGGCAAGACCTGCCACCTGCTGGAAGCCGAACCGGCGCTGGCCGAAGTGATCGCGGTGGATCTGGAAGAAAAGCGCCTGACCCGTGTACGCGAGAATCTCCAGCGCCTCGGCCTGGAGGCGCGCCTGATCGCCGCCGACGGCCGTGCGACCAAGGTCTGGTGGGACGGCACGCCATTCCAGCGCATCCTCCTCGATGCACCCTGCTCGGCTACCGGGGTGATCCGCCGTCATCCGGATATCAAGCTGACGCGCAAATCCGAAGACATCCCCGCCCTGGCGCAACTTCAAGGCGAGCTGCTCGATGCGCTGTGGCCGACCCTGGCGCCCGGCGGCATCCTGCTCTACGCCACCTGCTCGGTACTGCCGACGGAAAACAGCGACACCATCGCCGCCTTCCTCGCCCGTACGCCCGACGCGCAGGAGGTCGCCATCGGTGGAGACTTCGGTCTGCAAGCGGCGCACGGTCGCCAGCTGCTGCCACAGCTGGACGGCCATGACGGCTTCTACTATGCCAAGCTGATAAAGAGCGCTGTGCCCAGCCACAGCTAA MNPRLAAARALTAVLSGKASLGSSLPPQLDKVEHHDRALAQDLAFGAARWQPRLQLLADKLLEKPFKAADKDVEALLLIGLYQLLHSRIPEHAAIGETVGCAGALKKPWAKGLLNAVLRRAQREHEALFAELDRDPVLHTAHPRWLQKQLKSFWPEYWQAICAANNAHPPLILRVNRRHGSRDAYLEELRGAGFAAEPCTFSRDGVRLLQPCDVTALPGFREGRVSVQDEAAQLAADLLELAPGQRVLDACAAPGGKTCHLLEAEPALAEVIAVDLEEKRLTRVRENLQRLGLEARLIAADGRATKVWWDGTPFQRILLDAPCSATGVIRRHPDIKLTRKSEDIPALAQLQGELLDALWPTLAPGGILLYATCSVLPTENSDTIAAFLARTPDAQEVAIGGDFGLQAAHGRQLLPQLDGHDGFYYAKLIKSAVPSHS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0054 CDS 50550 51494 - methionyl-tRNA formyltransferase YP_001185560 146305095 5106239 TIGRFAM: methionyl-tRNA formyltransferase PFAM: formyl transferase domain protein Unknown[Class 3] biological_process|GO:0006431|methionyl-tRNA aminoacylation|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0004479|methionyl-tRNA formyltransferase activity|IEA TIGR00460|fmt|methionyl-tRNA formyltransferase|equivalog|1.4e-124|2.1.2.9|Protein synthesis|tRNA aminoacylation PF02911|Formyl_trans_C, Formyl transferase, C-terminal domain|207|303|1e-26 COG0223|Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ; COG0223|Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ATGCCTGACTCATTGCGTATCGTCTTTGCCGGCACCCCGGAATTCGCCGCCGAACACCTCAAGGCCCTGCTGGCCAGCCAGCACGAGGTCATCGCCGTCTACACCCAGCCGGATCGTCCGGCCGGCCGTGGCCAGAAGCTGATGCCAAGCCCGGTCAAGCAGCTCGCCGTGGAACACGGCATTCCGGTCCATCAGCCGGCCAGTCTGCGCAATGAAGAGGCTCAGGCCGAGCTGGCGGCGCTCAAGCCAGACCTGATGGTGGTGGTCGCCTACGGCCTGATCCTGCCGCAGGTGGTGCTCGACACGCCGCGCCTGGGCTGCATCAACAGCCACGCCTCGCTGCTGCCACGCTGGCGCGGCGCGGCGCCGATCCAGCGCGCGGTGCAGGCCGGCGACCTCGAGTCCGGCGTCACCGTGATGCAGATGGAAGCGGGCCTGGACACCGGGCCGATGCTGCTCAAGGTCAGCACGCCGATCTCGGCAGAAGACACCGGCGGCAGCCTGCATGACCGTCTCGCCCGGCTCGGCCCGCAGGCGGTGCTGCAGGCCATCGACGGCCTGGCCGCCGGCACCCTGATCGGCGAACTACAGGACGACGCCCAGGCCAACTACGCGCACAAGCTGAACAAGGACGAGGCGCGCCTCGACTTCAGCCGCCCGGCCGTCGAGCTGGAACGCCTGATTCGCGCCTTTCACCCCTGGCCAATCTGCCACACCACGCTGAACGGTGATGCGCTGAAAGTGCATGCCGCCGAACTCGGTGAGGGCAGCGGCGCACCGGGCACCATCCTCGCCGCGGACAAGAACGGCCTGACCGTGGCCTGCGGCGAAGGCGCGCTGCGCCTGACTCGCCTGCAGCTGCCAGGCGGCAAACCGCTGGCCTTCAGCGATCTGTACAACAGCCGCCGCGAGCAGTTCGCGCCCGGCCTGGTACTCGGTCAATGA MPDSLRIVFAGTPEFAAEHLKALLASQHEVIAVYTQPDRPAGRGQKLMPSPVKQLAVEHGIPVHQPASLRNEEAQAELAALKPDLMVVVAYGLILPQVVLDTPRLGCINSHASLLPRWRGAAPIQRAVQAGDLESGVTVMQMEAGLDTGPMLLKVSTPISAEDTGGSLHDRLARLGPQAVLQAIDGLAAGTLIGELQDDAQANYAHKLNKDEARLDFSRPAVELERLIRAFHPWPICHTTLNGDALKVHAAELGEGSGAPGTILAADKNGLTVACGEGALRLTRLQLPGGKPLAFSDLYNSRREQFAPGLVLGQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0055 CDS 51547 52053 - peptide deformylase YP_001185561 146305096 5106240 TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase 3.5.1.88 Cytoplasmic[Class 3] biological_process|GO:0006464|protein modification process|IEA ; molecular_function|GO:0042586|peptide deformylase activity|IEA TIGR00079|pept_deformyl|peptide deformylase|equivalog|6.5e-77|3.5.1.88|Protein fate|Protein modification and repair PF01327|Pep_deformylase, Polypeptide deformylase|3|153|1e-47 COG0242|Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ; COG0242|Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ATGGCGATCCTGAATATCCTCGAATTTCCTGATCCACGCCTGCGTACCATCGCCAAACCGGTGGACGTCGTGGACGACTCCATCCGTCAGCTGGTCGACGACATGTTCGAGACCATGTATGACGCACCCGGTATCGGCCTGGCCGCGACGCAGGTCAACGTGCACAAGCGCGTGGTGGTCATGGATTTATCCGAGGACAAGTCCGAACCGCGGGTGTTCATCAATCCCGAGTTCGAATCGCTGACCGATGAGATGGACCAGTATCAGGAAGGCTGCCTGTCGGTGCCCGGCTTCTACGAGAACGTCGATCGCCCGCAGAAGGTCAAGATCAAGGCGCTGGACCGCGATGGCCAGCCCTTCGAACTGATCGCCGAAGGCCTGCTCGCCGTGTGCATCCAGCACGAATGCGATCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCAACCTCAAGCGCGACCGGATTAAGAAGAAGCTGGAAAAACAGCATCGCCAACGCGCTTGA MAILNILEFPDPRLRTIAKPVDVVDDSIRQLVDDMFETMYDAPGIGLAATQVNVHKRVVVMDLSEDKSEPRVFINPEFESLTDEMDQYQEGCLSVPGFYENVDRPQKVKIKALDRDGQPFELIAEGLLAVCIQHECDHLNGKLFVDYLSNLKRDRIKKKLEKQHRQRA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0056 CDS 52207 53244 + Peptidoglycan-binding LysM YP_001185562 146305097 5106241 PFAM: Peptidoglycan-binding LysM Unknown[Class 3] biological_process|GO:0030436|asexual sporulation|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR02899|spore_safA|spore coat assembly protein SafA|subfamily_domain|2.2e-08||Cellular processes|Sporulation and germination COG1652|XkdP, Uncharacterized protein containing LysM domain [Function unknown]. ; COG1652|XkdP, Uncharacterized protein containing LysM domain [Function unknown]. ATGAGGAAATCACTACTCGCCCTGCTCTTTGCAGCTGGCGGACTGGCCCTGACCAGCTTGGCTCAGGCCGAAGTGCAACTCAAGGACGGTCACCCGGACCGCTACACCGTGGTCAAGGGCGATACCCTCTGGGACATTTCCGGCAAGTTCCTGCGTCAGCCGTGGAAGTGGCCGGAGATCTGGCACGCCAACCCACAGGTGGCCAACCCGCATCTGATCTACCCTGGGGACACTCTCAATCTGGTCTATGTCGACGGCCAGCCACGCCTGATGCTCAACCGCGGCGAGTCGCGCGGTACCATCAAGCTGTCGCCGCAGGTGCGCAGCACGCCGATGGCCGAGGCGATCCCGACCATTCCGCTGGAGGCGATCAACAGCTTCCTGCTGAGCAACCGCATCGTCGATACCCCGGAAGAGTTCAACGGCAAGCCCTACATCGTCGCCGGCAACGCCGAGCGTGTGGTCAGTGGCGCCGGTGACCGCGTCTACGCTCGCGGCCAGTTCGACGAACAGCATCCGATCTACGGCATCTTCCGTCAGGGCAAGACCTACGTGGATCCGGAAACCAAGGAATTCCTCGGCATCAACGCCGATGACATCGGCTCCGGCGAGATCGTCGCCGAGGAAGGCGATGTCGGGACCCTGCTGCTGAAGCGCTCGACTCAGGAAGTACGCCTGGGTGACCGCCTGTTCCCCACCGAAGAGCGGGCGATCAACTCCACCTTCATGCCCAGCGAGCCGGCGGGCGAGATCAAGGGTCTGATCCTCGACGTGCCGCGTGGTGTGAGCCAGATCGGACAGTTCGACGTGGTCACCTTGAACAAGGGCGCGCGCGACGGCCTGGAAATCGGCAACGTGCTGGCGGTGTACAAGACCGGCGAGACCGTACGCGACCGCGTCACTGGCGAGAGCGTGAAGATTCCGGATGAACGCTCCGGTCTGCTGATGGTGTTCCGCACCTACGACAAGCTCAGCTACGGCCTGGTGCTGCAGGCCAGCCGGCAGCTGGCGGTGATGGACAAGGTCCGCAACCCGTAA MRKSLLALLFAAGGLALTSLAQAEVQLKDGHPDRYTVVKGDTLWDISGKFLRQPWKWPEIWHANPQVANPHLIYPGDTLNLVYVDGQPRLMLNRGESRGTIKLSPQVRSTPMAEAIPTIPLEAINSFLLSNRIVDTPEEFNGKPYIVAGNAERVVSGAGDRVYARGQFDEQHPIYGIFRQGKTYVDPETKEFLGINADDIGSGEIVAEEGDVGTLLLKRSTQEVRLGDRLFPTEERAINSTFMPSEPAGEIKGLILDVPRGVSQIGQFDVVTLNKGARDGLEIGNVLAVYKTGETVRDRVTGESVKIPDERSGLLMVFRTYDKLSYGLVLQASRQLAVMDKVRNP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0057 CDS 53331 54437 + DNA protecting protein DprA YP_001185563 146305098 5106242 TIGRFAM: DNA protecting protein DprA PFAM: SMF family protein Cytoplasmic[Class 3] biological_process|GO:0009294|DNA mediated transformation|IEA TIGR00732|dprA|DNA protecting protein DprA|equivalog|9.9e-106||Cellular processes|DNA transformation PF02481|SMF, SMF family|78|286|9e-61 COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ; COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ATGCCCCTACCTTCCTCGCATTCTCCCGCCGAGCTCGAAGCCCGCCTGCGCCTGCACTTGCTGCCGGAGCTCGGCCCGCGGCGCTTTCGCAAGCTGCTCAGTGCCTTTGACAGCGCTTCGGCCGCACTCAGTGCTCCGGCCAGCGCCTGGCGCTCGCTGGGCCTGCCGGCCGTGTGCGCCGAGCCGCGACGCAGTGCCGAGATCCGGCAACGCGCCGCCGCGGCTATGCACTGGCTCGACCAGACAGATCAGCACCTGCTGATGTGGGATGACCCACGCTATCCGGCCCTGCTCGCCGAGCTGGCGGATGCGCCGCCGCTGCTGTTCGTGGGCGGAGACCCGCTGCTGCTGGAGGCACCGCAACTGGCCATGGTCGGAAGCCGCCGCGCCTCTCGGCCGGGTCTGGACAATGCTCACGCCTTCGCCCGCAGCCTGGCCGCCGGCGGCTTCGTGATCACCAGCGGGTTGGCCCTGGGCATAGATGGCGCCGCGCATCAGGGCGCGCTGGATGGTGGCGGCAAGACCGTGGCGGTGCTGGGTACCGGCCTGGAGTGCCTGTATCCGGCACGGCACAAGCGGCTGGCGGCGCAGATCATCGAGCAGGGCGGTGCTCTGGTCTCCGAACTGCCGTTGGACTGTCCGCCGCAGGCGAGCAACTTCCCGCGACGCAACCGGATCATCAGCGGCCTGTCACTGGGCGTGCTGGTGGTCGAGGCCAGCCCCTCCAGCGGTTCGCTGATCACCGCGCGTCTGGCTGCCGAGCAGGGTCGCGAGGTGTACGCCATTCCCGGCTCCATCCACCATCCAGGGGCGCGCGGCTGTCACCAGCTGATTCGCGACGGCGCGACGCTGGTGGAAAGCATCGAGCATATCCTCGAGGCTCTGCGCGGTTGGCAGACGCCAAGCGGACAGCAAGCCTCGGCTGCGCAGCCCGGCGCCGAGCAGCATCCCCTGCTGACGTTGCTGCACGCCGCGCCACACAGTAGCGAGGCCTTGGCGCACAGCAGTGGCTGGCCACTCGCGCAGGTGCTGGCGGCGCTGACCGAACTGGAGCTGGACGGCCTGGTCTGCTGCGAGGCCGGGCGCTGGCTGGCGCGCGGTCCATAA MPLPSSHSPAELEARLRLHLLPELGPRRFRKLLSAFDSASAALSAPASAWRSLGLPAVCAEPRRSAEIRQRAAAAMHWLDQTDQHLLMWDDPRYPALLAELADAPPLLFVGGDPLLLEAPQLAMVGSRRASRPGLDNAHAFARSLAAGGFVITSGLALGIDGAAHQGALDGGGKTVAVLGTGLECLYPARHKRLAAQIIEQGGALVSELPLDCPPQASNFPRRNRIISGLSLGVLVVEASPSSGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGATLVESIEHILEALRGWQTPSGQQASAAQPGAEQHPLLTLLHAAPHSSEALAHSSGWPLAQVLAALTELELDGLVCCEAGRWLARGP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0058 CDS 54504 55061 + SUA5/yciO/yrdC, N-terminal domain YP_001185564 146305099 5106243 PFAM: SUA5/yciO/yrdC, N-terminal domain Cytoplasmic[Class 3] TIGR00057|TIGR00057|Sua5/YciO/YrdC/YwlC family protein|hypoth_equivalog|5.9e-13||Unknown function|General PF01300|Sua5_yciO_yrdC, yrdC domain|17|179|1e-28 COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ; COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ATGGCCAGCAACTGGCAGGTACAGCAAGCGGCGCGGGTGGTGTGTGAAGGCGGCGTGATCGCCTACCCCACCGAAGCGGTCTGGGGTCTGGGCTGCGACCCCTGGAACGAAGTCGCCGTGGACCGCCTGCTGGCTCTCAAGGAGCGGCCCGTGCACAAGGGCCTGATTCTGGTGGCCGACGACATCGAGCAGTTCGACTTTCTCCTCGATGATCTGCCGGCGATCTGGCAGGAGCGCCTGGCCGCCAGTTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCGTCTGCCCGCATGGATCACCGGCGTGCACGACAGTGTGGCCCTGCGCGTCAGTGATCATCCGCTGGTACGTGCCCTCTGCCGGCTCACCGGACCGCTGATTTCCACCTCGGCCAATCCGGCAGGCCGCCCCGCGGCGCGCTCGCGGCTGCGCGTCGAGCAGTATTTCCCCCGGCAACTGGACAAGGTGCTGGGCGGCGCCCTGGGCGGGCGCAAGAACCCCAGCCTGATTCGCGACCTGCGCACGGGCGATGTGATTCGCTCGTCCTGA MASNWQVQQAARVVCEGGVIAYPTEAVWGLGCDPWNEVAVDRLLALKERPVHKGLILVADDIEQFDFLLDDLPAIWQERLAASWPGPNTWLVPHQDRLPAWITGVHDSVALRVSDHPLVRALCRLTGPLISTSANPAGRPAARSRLRVEQYFPRQLDKVLGGALGGRKNPSLIRDLRTGDVIRSS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0059 CDS 55173 56150 - Alcohol dehydrogenase, zinc-binding domain protein YP_001185565 146305100 5106244 PFAM: Alcohol dehydrogenase, zinc-binding domain protein Unknown[Class 3] biological_process|GO:0008152|metabolic process|IEA ; molecular_function|GO:0016655|oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor|IEA TIGR02824|quinone_pig3|putative NAD(P)H quinone oxidoreductase, PIG3 family|subfamily|1.2e-19||Unknown function|Enzymes of unknown specificity PF08240|ADH_N, Alcohol dehydrogenase GroES-like domain|28|109|4e-15 COG0604|Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. ; COG0604|Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. ATGGCCAAGCGTATCCAGTTCAGCCAACACGGCGGCAGCGAGGTGCTGGAGTACCGCGACTATCAGCCGGCGGCCCCCGGCCCGCGCGAAGTGCGGGTGGCCAACCGCGCCATCGGCCTGAATTTCATCGACACCTATTTCCGCAGCGGTCTGTATGCCCCGCCGGCACTGCCCTCCAGCCTGGGTACCGAAGGCGCTGGCGTAGTCGAGGCGGTGGGCAGCGAGGTGCGCAACTTCGCCGTCGGCGACCGCGTGGCCTATGCCACCGGCCCGCTCGGCGCCTACAGCGAGCTGCACGTGCTGCCGGCGGACAAGCTGGTCAGACTGCCGGAGGCCATCAGCTTCGAGCAGGCCGCGGCGGTGATGCTCAAGGGCCTGACCGTGCAGTACCTGCTGCGCCAGACCTATGAGCTCAAGGGCGGCGAGACCATTTTGTTCCATGCCGCAGCGGGCGGCGTCGGCTCCTTCGCCTGCCAGTGGGCGCGGGCGTTGGGGGTCAATCTGATCGGCACGGTCAGTTCGGCCGAGAAGGCGGCGCGGGCGAAAGAGCAGGGCGCCTGGGCGACCATCGACTACAGCCATGAGAACGTCGTGCAGCGCGTGCTGGAGCTGACCGACGGCAAGAAGTGCCCGGTGGTCTACGACGGCGTCGGCAAGGACACCTGGGAAACCTCGCTGGACTGCGTGGCGCCGCGCGGCCTGCTGGTCAGCTTCGGCAACGCCTCCGGTGCGGTCACCGGGGTCAACCTGGGCGTCCTGGCGCAGAAGGGCTCGCTGTACGTCACCCGGCCGACCCTGGCCGGCTACGCCGATACCCCCGAGCGTCTGCAGACCATGGCCGACGAGCTGTTCGGCATGATCGCCGGCGGCCAGCTGCAGGTGGAGATCAGCAACCGTTATGCGTTGAAGGACGCCGCCGCTGCGCAGGACGCGCTGAGCGCCCGGCAGACTACCGGCTCGACCATTCTGCTGCCGTGA MAKRIQFSQHGGSEVLEYRDYQPAAPGPREVRVANRAIGLNFIDTYFRSGLYAPPALPSSLGTEGAGVVEAVGSEVRNFAVGDRVAYATGPLGAYSELHVLPADKLVRLPEAISFEQAAAVMLKGLTVQYLLRQTYELKGGETILFHAAAGGVGSFACQWARALGVNLIGTVSSAEKAARAKEQGAWATIDYSHENVVQRVLELTDGKKCPVVYDGVGKDTWETSLDCVAPRGLLVSFGNASGAVTGVNLGVLAQKGSLYVTRPTLAGYADTPERLQTMADELFGMIAGGQLQVEISNRYALKDAAAAQDALSARQTTGSTILLP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0060 CDS 56295 57209 + Coproporphyrinogen oxidase YP_001185566 146305101 5106245 PFAM: coproporphyrinogen III oxidase 1.3.3.3 Cytoplasmic[Class 3] PF01218|Coprogen_oxidas, Coproporphyrinogen III oxidase|1|301|1e-144 COG0408|HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. ; COG0408|HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. GTGACTGACCGTACCGAGGCCGTGAAGGCCTATCTGCTCGACCTGCAAGATCGCATCTGCGCCGCCCTCGAGGCCGAGGACGGCCAGGCCCTGTTCCGTGAGGACGCCTGGCAGCGTCCGGCTGGCGGCGGCGGCCGCACGCGGGTGATCGAGAACGGCGCGCTGATCGAAAAGGGCGGGGTCAACTTCTCCCACGTGTTCGGCGACAGCCTGCCGCCCTCGGCCAGCGCCCATCGCCCCGAACTTGCCGGCCGCGGCTTTCAGGCCCTCGGCGTGTCGCTGGTGATCCATCCGGAAAACCCCTACGTGCCCACCTCGCACGCCAACGTGCGCTTCTTCAGCGCGGAGAAGGAAGGCGAGGAGCCAGTGTGGTGGTTCGGCGGCGGTTTCGACCTGACCCCCTACTACGCCAACGAGGAGGATTGCCGCTACTGGCATCAGGTGGCCTTCGATGCCTGCGCGCCCTTTGGCGCCGAGGTCTATCCCAGGTTCAAGGCCTGGTGCGACCGCTACTTCCACCTCAAGCACCGCGGCGAGCCGCGCGGCATTGGCGGGTTGTTCTTCGACGATCTCAACGAATGGGACTTCGACACCTGCTTCGCCTTCATGCGCGCCATCGGCGACGCCTACATCCAGGCCTACCTGCCGATCGTCCAGCGCCGCAAGCTCACCCCCTTCGGTGAGCGCGAGCGCGAGTTCCAGGCGTTCCGCCGCGGTCGCTATGTCGAGTTCAACCTGGTGTTCGACCGCGGCACCCTGTTCGGCCTGCAGTCCGGCGGGCGTACCGAGTCGATTCTGATGTCGCTGCCGCCGATGGTACGTTGGGGCTACGACTGGAAGCCCGAACCGGGCAGCGAGGAAGCGCGCCTGACCGAGTATTTCCTCACCGATCGTGACTGGCTTTCGGGGGCCTGA MTDRTEAVKAYLLDLQDRICAALEAEDGQALFREDAWQRPAGGGGRTRVIENGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPYVPTSHANVRFFSAEKEGEEPVWWFGGGFDLTPYYANEEDCRYWHQVAFDACAPFGAEVYPRFKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFMRAIGDAYIQAYLPIVQRRKLTPFGEREREFQAFRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPMVRWGYDWKPEPGSEEARLTEYFLTDRDWLSGA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0061 CDS 57317 58138 + shikimate 5-dehydrogenase YP_001185567 146305102 5106246 TIGRFAM: shikimate 5-dehydrogenase PFAM: Shikimate/quinate 5-dehydrogenase Cytoplasmic[Class 3] biological_process|GO:0009423|chorismate biosynthetic process|IEA ; molecular_function|GO:0004764|shikimate 5-dehydrogenase activity|IEA TIGR00507|aroE|shikimate 5-dehydrogenase|equivalog_domain|4.7e-99|1.1.1.25|Amino acid biosynthesis|Aromatic amino acid family PF01488|Shikimate_DH, Shikimate / quinate 5-dehydrogenase|117|223|4e-14 COG0169|AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. ; COG0169|AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. ATGGACCGCTACTGCGTCTTCGGCAACCCCATCGGCCACAGCAAATCGCCGCTGATCCACCGTCTGTTCGCCGAGCAGACCGGCCAGGTGCTGACCTACGAAGCGCGGCTGGCGCCGCTGGACGATTTCATCGGTGACGCGCGCGCCTTCTTCGCCGAGGGGCTGGGCGCCAACGTCACCGTACCGTTCAAGGAAGAGGCCTTTCGCCTGGCCGACGAGCTGAGCGAGCGCGCCCGCCGCGCGGGCGCGGTGAACACCCTGAAGAAGCTGGAAGGTGGCCGCCTGCTCGGTGACAACACCGACGGTGCCGGATTGACCCGCGACCTGCAGGACAATGCCGGCTTCGCCCTGACCGGCAAGCGCATCCTCGTGCTCGGGGCCGGCGGCGCCGTGCGCGGCGTGCTCGAACCCTTCCTGGCGCAGAAGCCGGCCGTGCTGGTGATCGCCAACCGCACCGTGGCCAAGGCCGAGCAGCTGGTGCGCGAATTCGCCGACCTCGGCCCGCTGGTCGCTGCCGGTTTCGACTGGCTCGACGCGCCGGTGGACCTGATCGTCAACGGTACCTCGGCCAGCCTCGGTGGCGAGCTGCCGCCGATCGCACCGAGCCTGATCCAGCCGGGCCATACGCTTTGCTACGACATGATGTATGGCAAGGAGCCCACCGCCTTCAACCGCTGGGCCTTTGATCAGGGCGCGGCGCGCTGCCTGGACGGCCTCGGCATGCTGGTCGAGCAGGCCGCCGAAGCATTCGAGCTATGGCGCGGCGTGCGCCCGAACACCGCGCCGGTGCTGGCCGAATTGCGCCGCCAGCTGGCGGGCTGA MDRYCVFGNPIGHSKSPLIHRLFAEQTGQVLTYEARLAPLDDFIGDARAFFAEGLGANVTVPFKEEAFRLADELSERARRAGAVNTLKKLEGGRLLGDNTDGAGLTRDLQDNAGFALTGKRILVLGAGGAVRGVLEPFLAQKPAVLVIANRTVAKAEQLVREFADLGPLVAAGFDWLDAPVDLIVNGTSASLGGELPPIAPSLIQPGHTLCYDMMYGKEPTAFNRWAFDQGAARCLDGLGMLVEQAAEAFELWRGVRPNTAPVLAELRRQLAG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0062 CDS 58342 59982 - sulphate transporter YP_001185568 146305103 5106247 PFAM: Sulfate transporter/antisigma-factor antagonist STAS Cytoplasmic Membrane[Class 3] biological_process|GO:0008272|sulfate transport|IEA ; cellular_component|GO:0016020|membrane|IEA ; molecular_function|GO:0015116|sulfate transmembrane transporter activity|IEA TIGR00815|sulP|sulfate permease|subfamily|6.9e-92||Transport and binding proteins|Anions PF01740|STAS, STAS domain|459|529|3e-05 COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ; COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ATGCGATCCGGCGCTACGCTAGGCTCCTGCGAGCTGCCCGAATCGAATCCAACCTGCCTGGCCCCAACGATGCCGCTACCCGACCTGCAGACTCTTTTGCCCTTCCTGCGCTGGCTGCCCGGCACCAGCCGCAAGACCCTCGGCAACGATCTGCTGGTCGGCCTCACCGGCGCGGTGCTGGCCCTGCCGCAGTCGCTGGCCTATGCGCTGATCGCCGGCCTGCCGGCCGAGTACGGCCTGTACGCAGCCATAGTGCCGGTGATCGTCGCCTGCCTGTGGGGCTCGTCCTGGCACCTGATCTGCGGGCCGACGGCGGCCATCTCCATCGTCCTGTTCACCAGCGTCAGCCCGCTGGCCAAAGCCGGCAGCGAGCAGTTCATCGCCCTGGTGCTGCTGCTGACCTTCCTCGCCGGGCTGTTCCAGTGGCTGCTCGGCCTGCTGCGCTTCGGCGCCCTGGTCAACTTCGTCTCGCAATCGGTGGTGCTCGGCTTCACCCTGGGCGCGGCGCTGGTCATCGCCATCGGCCAGATTCCCAATCTGCTGCGCGTGGAGATCGTCAGCCAGGCCACCGCCCTGGCCAGCCTGCTGCAGATCGGTCAGCACCTGAACGACGTGCATTGGCCAAGCCTGGCCCTGGCCGCCTTCACCCTGCTGCTCTGCCTGGCGGTACGACGCCTGTGGCCGAAGGCGCCGGCGTTGCTGCTCGGCCTGGTCGCCGGCAGCGCGCTGGTGTGGCTGCTGCCGGAACGCCTGGTCGGCGGCATCGCCCTGGTCAGCGCCTTCGAAGGCGGCCTGCCGCCCTTCACGCCGCTGCAGTTCGACCTCAACAGCCTGCTGCAGCTGCTGCCGGCGGCGGTGGCCTGCGGCATGCTCGGGCTGGTCACCAGCCTGTCCATCGCCCGCGCGCTGGCGGTCAAATCGCACCAGTTCCTCGATGCCAATCAGGAAGTGCGCGCCCAGGGGCTGTCGAACATGCTCGGGCCCTGGTTCGCCGGTTCGCTGTCGGCCGGCTCCTTCACCCGCTCGGCGCTCAACCTGCAGGCCGGCGCGCGTACGCCGCTGGCCGGGGTGTTCTCGGCGTTGCTGGTGGCGCTGTTCGCCCTGTTCGGCGCAGCGCTGCTGGCGCATATTCCGCTGCCGGTGATGGCCGCCGGCATCCTGCTGATCTGCTGGGGCCTGGTCGATCTGGCGGCGATCCGCGCCCTGCGCCGCGTCAGCCGCGCCGAGTTCGCGGTGATGCTGCTGACGCTGCTGGCCACCCTGCTGCTGGAACTGCAGACGGCAATCTACGCCGGGGTGCTGGCCTCGCTGTTCTTCTACCTCAAGCGCACCTCGCAACCGCGCGTGCGCCTGTGGCAGGACGGCGACGACGAGGTGCTGCGCATCGAGGGCTCGATCTTCTTCGGCGCCTGCCACTACATCCAGCAGCTGCTGCAGCGCAGCCGCGGCCAGCGCCTGGTGATCGACGCGCGGCATATCAACTTCATCGACTACGCCGGGGTGGAGATGCTGCACCAGGAGGCACGCCGCCTGCTGGCCGGACAGCGCAGCCTGGTGTTGCGCCAGGCCCGGCCGCAGGTGGTGGAGGAGATTCTCAAGCTCGAAGGCGCTGAACGCTGTCCGGTGCAGTTCGAGGATTGA MRSGATLGSCELPESNPTCLAPTMPLPDLQTLLPFLRWLPGTSRKTLGNDLLVGLTGAVLALPQSLAYALIAGLPAEYGLYAAIVPVIVACLWGSSWHLICGPTAAISIVLFTSVSPLAKAGSEQFIALVLLLTFLAGLFQWLLGLLRFGALVNFVSQSVVLGFTLGAALVIAIGQIPNLLRVEIVSQATALASLLQIGQHLNDVHWPSLALAAFTLLLCLAVRRLWPKAPALLLGLVAGSALVWLLPERLVGGIALVSAFEGGLPPFTPLQFDLNSLLQLLPAAVACGMLGLVTSLSIARALAVKSHQFLDANQEVRAQGLSNMLGPWFAGSLSAGSFTRSALNLQAGARTPLAGVFSALLVALFALFGAALLAHIPLPVMAAGILLICWGLVDLAAIRALRRVSRAEFAVMLLTLLATLLLELQTAIYAGVLASLFFYLKRTSQPRVRLWQDGDDEVLRIEGSIFFGACHYIQQLLQRSRGQRLVIDARHINFIDYAGVEMLHQEARRLLAGQRSLVLRQARPQVVEEILKLEGAERCPVQFED Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0063 CDS 60029 60949 - Substrate-binding region of ABC-type glycine betaine transport system YP_001185569 146305104 5106248 PFAM: Substrate-binding region of ABC-type glycine betaine transport system Unknown[Class 3] biological_process|GO:0015871|choline transport|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015220|choline transmembrane transporter activity|IEA TIGR03414|ABC_choline_bnd|choline ABC transporter, periplasmic binding protein|subfamily|3.5e-198||Transport and binding proteins|Amino acids, peptides and amines PF04069|OpuAC, Substrate binding domain of ABC-type glycine betaine transport system|27|278|7e-48 COG2113|ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. ; COG2113|ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. ATGAACCGAATCAACGCGCTGTTGCTGGCCGGAGCGCTGTCCGCCAGCGCCAACGTCTGGGCCGAGGACGCGGCCTGCGCCACGGTCAAGCTGGGCGATCCGGGCTGGAGCGACATCGCCGTGACCAACGGCATCGCCAGCTTCCTGCTCGAAGGCCTCGGCTACCAGACGCAGAGCCAGACCCTGGCGGTGCCGATCATCTACGCCGGGCTGCAGAAGGGTCAGCTCGACGTGTTCCTCGGCAACTGGATGCCGGCGCAGCAGAGCAACTACGACAAGTTCGTCGCCAGCGGCGAGGTGGACCAACTGGCGCAGAACCTCGACGGCACCGAGTACACCCTGGCGGTGCCGACCTATGCCTTTGATGCCGGTGTGAAGACCTTCGCCGACCTCGACAAGCACGCCGACAAGTTCGGCAAAAAGCTCTACGGCATCGCCTCCGGCTCGCCGGCCAACGAATCGATCAAGCAGATGATCGCCGCCGACGAGTTCGGCCTGGGCGACTGGCAACTGGTGGAGTCCAGCGAGCAGGCGATGCTGGTGCAGGTCGGCCGCGCGGTCAAACGCGAGCAGTTCGTGGTGTTCCTCGGCTGGACCCCGCACCCGATGAACGTGCAGTACGACATGAAATACCTGCGCGGCGGCGAGAAGTATTTCGGCGACAGCGGCCAGGTCAACACCCTGGCGCGCAAGGGCTATGCCCAGCAGTGCCCCAATGCCGGCAAGTTGCTGAGCAACCTCAAATTCACCCAGGAGATGGAGAACAGCATCATGGATCGGGTGCTCAGCAAGCAGGCCAGCAACGCCCAGGCGATCAAGGACTGGCTGCAGGCCAACCCGCAGGTGCTCGACGCCTGGCTGGACGGGGTCACCACCCGCGACGGCGGCGACGGCCTGGCCGCGGTCAAGGCGCGGCTTTGA MNRINALLLAGALSASANVWAEDAACATVKLGDPGWSDIAVTNGIASFLLEGLGYQTQSQTLAVPIIYAGLQKGQLDVFLGNWMPAQQSNYDKFVASGEVDQLAQNLDGTEYTLAVPTYAFDAGVKTFADLDKHADKFGKKLYGIASGSPANESIKQMIAADEFGLGDWQLVESSEQAMLVQVGRAVKREQFVVFLGWTPHPMNVQYDMKYLRGGEKYFGDSGQVNTLARKGYAQQCPNAGKLLSNLKFTQEMENSIMDRVLSKQASNAQAIKDWLQANPQVLDAWLDGVTTRDGGDGLAAVKARL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0064 CDS 60993 62501 - sulfatase YP_001185570 146305105 5106249 PFAM: sulfatase Cytoplasmic[Class 3] TIGR03417|chol_sulfatase|choline-sulfatase|equivalog|0|3.1.6.6|No Data|No Data PF00884|Sulfatase, Sulfatase|2|368|1e-35 COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ; COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ATGAAACGCCCGAACATCCTCTTCATCATGGCCGACCAGATGGCCGCACCGATCCTGCCGCTGCACGATGCCGCCTCGCCGGTGCAGATGCCCAACCTGATGAAACTGGCCGAACGGGCCGTGGTGTTCGACTCGGCCTACTGCAACAGCCCGCTGTGCGCGCCGTCGCGCTTCACCCTGGTCAGCGGCCGGCTGCCGTCGCAGATCGGCGCCTATGACAACGCCGCCGACTTTCCCGCCGACGTGCCCACCTACGCCCACTACCTGCGCCGCCTCGGCTACCGCACCGCGCTGTCGGGCAAGATGCACTTCTGCGGCCCGGACCAGCTGCACGGCTACGAGGAACGCCTGACCAGCGACATCTACCCGGCCGACTACGGCTGGGCGGTGAACTGGGACGAACCGGACGTGCGCGCCAGCTGGTACCACAACATGTCCTCGGTGCTGCAGGCCGGCCCCTGCGTGCGCAGCAACCAGCTGGATTTCGACGAGGAGGTGGTGTTCAAGGCCCGCCAGTACCTCTACGACCACGTGCGTCTGACGCCGGAGCAGCCGTTCTGCCTGACCGTGTCGATGACCCACCCCCATGACCCCTACACCATCCCGCGCGAATACTGGGAGCGCTACGAAGGCGTGGACATTCCCATGCCGCGCCAGCACATCGAGCAGGCCGAGCAGGACCCGCACTCGCAGCGCTTGCTCAAGGTCATCGACCTGTGGGACAAGCCGCTGCCGGCAGACAAGATCCGCGACGCCCGCCGCGCCTACTTCGGTGCCTGCAGCTATATCGACGACAACATCGGCAAGCTGCTGAAGACCCTGGAGGAATGCGGCCTGGCCGAGGACACCCTGATCGTCTTCTCCGGCGACCACGGCGACATGCTTGGCGAGCGCGGCCTCTGGTACAAGATGCACTGGTTCGAGATGGCCGCCCGTGTGCCGCTGCTGGTGCATGCGCCGCAGCGCTTCGCCGCGCACCGGGTCAGCCAGTCGGTCTCCACCCTCGATCTGCTGCCCACACTGGTGGAACTGGCCGGCGGCCGGGTCGAGGAGGGCCTGGCGCTGGAGGGCCGCTCGCTGCTGGCGCATCTGACTGGCGAAGGCGGACATGACGAGGTAATCGGCGAATATATGGCCGAAGGCACCACCAGCCCGCTGATGATGATCCGCCGCGGGCCGTGGAAATTCGTCTACTCCGAGCAGGATCCGCTGCTGCTGTTCCATCTCCAGCAGGACCCGCAGGAGCGCGAGAATCTGGCCGGCTCGGCGGACCACCAGGGCGTGCTGGCCGAGTTTCTCGCCGAGGCGCGGGCGCGCTGGGACATCCCCGCGATCCACGCCGCCACCCTGGCCAGCCAGCGCCGTCGGCGCCTGGTGGCAGAGGCCCTGAGCCAGGGCAAGCTGACCAGCTGGGACCATCAGCCCTGGGTCGACGCCAGCCAGCAGTACATGCGCAACCATATCGATCTCGACGACCTGGAACGTCGCGCCCGCTATCCACAGGTTTGA MKRPNILFIMADQMAAPILPLHDAASPVQMPNLMKLAERAVVFDSAYCNSPLCAPSRFTLVSGRLPSQIGAYDNAADFPADVPTYAHYLRRLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWAVNWDEPDVRASWYHNMSSVLQAGPCVRSNQLDFDEEVVFKARQYLYDHVRLTPEQPFCLTVSMTHPHDPYTIPREYWERYEGVDIPMPRQHIEQAEQDPHSQRLLKVIDLWDKPLPADKIRDARRAYFGACSYIDDNIGKLLKTLEECGLAEDTLIVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPQRFAAHRVSQSVSTLDLLPTLVELAGGRVEEGLALEGRSLLAHLTGEGGHDEVIGEYMAEGTTSPLMMIRRGPWKFVYSEQDPLLLFHLQQDPQERENLAGSADHQGVLAEFLAEARARWDIPAIHAATLASQRRRRLVAEALSQGKLTSWDHQPWVDASQQYMRNHIDLDDLERRARYPQV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0065 CDS 62616 63569 + transcriptional regulator, LysR family YP_001185571 146305106 5106250 PFAM: regulatory protein, LysR Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|6.1e-168||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|10|68|1e-14 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGCGTAAAGTGCTCGATGAGATTTCCCTGGACAGCCTGCGGGTGTTCGAATCGGCCGCCCGCCTGCTGAGCTTCACCGCGGCGGCCAACGAGCAGGGCAGCAGCCAGCCGGCCATCAGCCAGCAGATCAAACGCCTGGAACAGCAGCTGGCGGTACGCCTGTTCGACCGCGTGCATCGCGGATTGGTGCTGACGGAAGCGGGCGAACTGTTGCTGCGTTACGTGCAGGAGGGCCTGCACAGCCTGGACAGCGGCCTGCAGGCGGTGGTCGCGCGGCAGCAGCATGAGGTGCTGCAGGTGGCCACCGATTTCGCCTTCGCCGCCTACTGGCTGATGCCGCGTCTGCAGCGCTTCCATCAGCTGCACCCGGAGGTGGACGTGAGCCTGGTGACCACCGAGCGCGACTTGGGCGGCAACCTGCCGGGCGAGATCGACGTGGCCATCAGTTTCGGCGACGGTCGCTGCAAGCACGGCGAGAGCCTGCTGCTGTTCGGCGAGGAAGTGTTCCCGGTGTGCAGTCCGCACCTGCTGCACGGCCGCGAGCCGGTGGACTCGGCGGCATTGTTGGCGCGCCTGCCACTGCTGCATCTGCGCCCGGAGGCGCGCGCCAACTGGTTTGCCTGGGATGGCGTATTCCGCGCGCTGGGCATTGCCGAGCCCCCTTCTGCCGGCGCCCTGCGCTTCGACAACTACACCTTGCTGATCCAGGCCGCCATCGCCGGCCAGGGCGTGGCCATCGGCTGGCGCTACCTGGTGGACGAGCTGTTGGCCCAGGGGCTGCTGGTGCGCATGCTGGACACCTCGATCCGCTCGGCCTATGGCTATTACGTGGTGATGCCCGAGCGCAAGCGGCGTGCGCGGCTGGTGCGCTGCTTCGTCGACTGGCTGCAGGACGAGCTGGCCAGCCTGCAGCGGCAGCCGCCGCAAGGTGGTTGGGCGGGTGTCGCGATCTAG MRKVLDEISLDSLRVFESAARLLSFTAAANEQGSSQPAISQQIKRLEQQLAVRLFDRVHRGLVLTEAGELLLRYVQEGLHSLDSGLQAVVARQQHEVLQVATDFAFAAYWLMPRLQRFHQLHPEVDVSLVTTERDLGGNLPGEIDVAISFGDGRCKHGESLLLFGEEVFPVCSPHLLHGREPVDSAALLARLPLLHLRPEARANWFAWDGVFRALGIAEPPSAGALRFDNYTLLIQAAIAGQGVAIGWRYLVDELLAQGLLVRMLDTSIRSAYGYYVVMPERKRRARLVRCFVDWLQDELASLQRQPPQGGWAGVAI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0066 CDS 63685 64587 + Serine-type D-Ala-D-Ala carboxypeptidase YP_001185572 146305107 5106251 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 3.4.16.4 Periplasmic[Class 3] PF00768|Peptidase_S11, D-alanyl-D-alanine carboxypeptidase|29|256|4e-58 COG1686|DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]. ; COG1686|DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]. GTGAAACTCCGATATTCGATTTTGGGCCTGCTGCTGAGCGCCGGCCTTGTTGTCTCGAACCTTCAGGCCGCGCCGGCCCAGCCGCAACAGGAACTTGCTGCGGGCAGCGCATTGCTGATCGACCTGAAGACCGGAAAGGAACTCTATTCCAGCAATCCCGACCTGCGTCTGCCGGTGGCTTCGGTGACCAAGCTGATGACCGCCATGGTGGTGCTCGATGCCAAGCTGCCGCTGGACGAGGTGCTGCCCATCACCATCCGCGACACCAAGGAGATGCAGGGCGTCTACTCGCGCGTACGCATCGGCAGCGAGATCAGCCGGCGCGACATGCTGCATCTGGCCCTGATGTCCTCGGAGAACCGCGCCGCCGCCAGCCTGGCCCACCACTATCCCGGTGGCCACGTGGCGTTCGTCGCGGCGATGAACGCCAAGGCCAAGGCGCTGGGCATGCACAACAGCCATTTCGTCGAGCCCACCGGCATGTCCGAGCGCAACGTCGCCACCGCCCGCGACCTGGCGCTGATGATCAAGGCCACCCAGCAGTACCCGCTGATCGGCCAGTTCAGCACCGACTCCGAGGCGACCGTCACCTTCCGCAAGCCGACCTATACCCTGGGCTTTCGCAACACCAACGCACTGGTGCGCAAGCCCGACTGGGACATCGGCATGAGCAAGACCGGCTTTACCAACGCCGCGGGGCGCTGCCTGGTGATGCTCACCTCGATGAACCAGCGTTCGGTGGCCTTCGTCGTGCTCGGTGCGTTCGGCAAGTACACCCATATGGCCGACGCCAACCGCCTCAAGCGCTGGATGGAGACCGGCAAGGTGACGCCGGTGCCGGCCGCCGCGCTCAGCTACAAGCAGCAGAAGCTGACCGAATGGAGCATGCAGGCCGCGCAGTGA MKLRYSILGLLLSAGLVVSNLQAAPAQPQQELAAGSALLIDLKTGKELYSSNPDLRLPVASVTKLMTAMVVLDAKLPLDEVLPITIRDTKEMQGVYSRVRIGSEISRRDMLHLALMSSENRAAASLAHHYPGGHVAFVAAMNAKAKALGMHNSHFVEPTGMSERNVATARDLALMIKATQQYPLIGQFSTDSEATVTFRKPTYTLGFRNTNALVRKPDWDIGMSKTGFTNAAGRCLVMLTSMNQRSVAFVVLGAFGKYTHMADANRLKRWMETGKVTPVPAAALSYKQQKLTEWSMQAAQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0067 CDS 64684 65592 - transcriptional regulator, LysR family YP_001185573 146305108 5106252 PFAM: regulatory protein, LysR Cytoplasmic[Class 3] TIGR03339|phn_lysR|aminoethylphosphonate catabolism associated LysR family transcriptional regulator|subfamily|5e-11||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|5|63|1e-11 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGAAGATCAGCCTGGAAGAAATGCTCGCGTTCGTTTGCGTGGTCGACAGCGGCTCCATCAGCGCGGCGGCCGAGCAACTGGAGCAGACCGCCTCCGGCGTCAGCCGCGCCCTCGGTCGTCTCGAGGAGAAGCTCGCGGTGACGCTGTTGCGCCGCACCACCCGGCGCCTGGAGCTGACCGAGGAGGGCGAGGTGTTTCTCGTCCAGGCGCGGCGCATTCTCGACAGCGTCGAGGAGGCCGAGGAGCAGATGGCCGTGCGCCGCCAGGCGCCGGCCGGACGCCTGCGCATCAACACCGCCTCGCCCTTCATGTTGCATGTGATAGTCCCGCTGATTGGCGATTTTCGCGCTCTTTATCCGCAGATCGAGCTGGAGCTGAACAGCGATGACCGCATCATCGATCTGCTGGAACGGCGTACCGACCTGGCCATCCGTATCGGCCATCTGCCCGACTCGAGCCTGCATGCACGCCCGCTATGCCATAGCCGCCGTCGCGTGCTGGCCAGCCCGGATTACCTGGCCAGGCATGGCCAGCCGATGCGCACCGAGGAGCTGGCCGGGCACAGCCTGATCGGCTTCACCGAACCGGACAGCCTCAATGAATGGCCGCTGCGCCATGCCCTCGGCGAGCGCTGGCGCATTACGCCCAGCCTGCACGTTTCCAGTGGCGACACCGTGCGGGAGCTGGCTCTGGCGGGTCAGGGCCTGGTCTGTCTGTCGGACTTCATGACCGACGTCGACCGCGCCAGCGGCCGTCTGGTGGAGGTGCTGGCCGAGCAGCGCGTGGAGGTGCGCCAGCCCATCAACGCGGTGTACTACCGCAATACGGCGCTGGCCTCGCGCATCACCTGTTTTCTCGATTTTCTCAGCGAGCGACTAGGCTCGCCCGGGCTGACGCCCCACGACTGA MKISLEEMLAFVCVVDSGSISAAAEQLEQTASGVSRALGRLEEKLAVTLLRRTTRRLELTEEGEVFLVQARRILDSVEEAEEQMAVRRQAPAGRLRINTASPFMLHVIVPLIGDFRALYPQIELELNSDDRIIDLLERRTDLAIRIGHLPDSSLHARPLCHSRRRVLASPDYLARHGQPMRTEELAGHSLIGFTEPDSLNEWPLRHALGERWRITPSLHVSSGDTVRELALAGQGLVCLSDFMTDVDRASGRLVEVLAEQRVEVRQPINAVYYRNTALASRITCFLDFLSERLGSPGLTPHD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0068 CDS 65802 66605 + aldo/keto reductase YP_001185574 146305109 5106253 PFAM: aldo/keto reductase Unknown[Class 3] TIGR01293|Kv_beta|voltage-dependent potassium channel beta subunit|subfamily|1.7e-06||No Data|No Data PF00248|Aldo_ket_red, Aldo/keto reductase family|4|253|3e-66 COG0656|ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]. ; COG0656|ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]. ATGAAATTCATCCCTGCCTTCGGTCTTGGCACCTTTCGCCTCAAGGATCAGGTCGCCATCGACTCGGTGCGCACCGGTCTGGAGCTGGGCTACCGGCATATCGACACGGCGCAGATCTACGGCAACGAGGCCGAGGTCGGCCAGGCCATCGCCGCCAGCAGCGTGGCGCGCGACGAGCTGTTCGTCACCACCAAGATCTGGACCGAGAACCTCGGCCCTGGCCGGGTGATCGCCAGCCTGCAGGAGAGCCTGCAGCGCCTGGGCCTGGAGCGGGTCGACCTGTGCCTGATCCACTGGCCGTCGCCGGGCGACGAGATCCCCGTGGCGCAGTACCTGGGCGAGCTGCTGGAGGCCAAGCGCCAGGGACTGACCGCGGCCATCGGCGTGTCCAACTTCACCATCGCCCATCTGCAGCAGGCTATCGAGGCAGTGGGTGCCGACGAGATCGCCACCAACCAGGTCGAGATCCACCCGCTGCTGCAGAATCGCAAGCTGGTCGACTTCACCCGCCAGCAGGGTATCCACCTCACCGCCTACATGCCGCTGGCCTACGGCAAGGTGCTGGCCGAGCCGGAGATCCAGCGCATCGCCGCCGCCCATGGCGTCAGCCCGGCGCAGGTCGCCCTGGCCTGGTCGCTGCAACAGGGTTATGCGGTGATCCCCTCCTCAACCAAGCGCGAGAACCTGGCCGCCAATCTGGCAGCCGCCGAGTTGCGCCTCAGCACCGAAGACATGGCCGCCATCGCTACCCTGGAGCGTGGCGAGCGGGTGGCCAACCCGGGGTTTGCGCCGCGCTGGGATTGA MKFIPAFGLGTFRLKDQVAIDSVRTGLELGYRHIDTAQIYGNEAEVGQAIAASSVARDELFVTTKIWTENLGPGRVIASLQESLQRLGLERVDLCLIHWPSPGDEIPVAQYLGELLEAKRQGLTAAIGVSNFTIAHLQQAIEAVGADEIATNQVEIHPLLQNRKLVDFTRQQGIHLTAYMPLAYGKVLAEPEIQRIAAAHGVSPAQVALAWSLQQGYAVIPSSTKRENLAANLAAAELRLSTEDMAAIATLERGERVANPGFAPRWD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0069 CDS 66677 67420 - short-chain dehydrogenase/reductase SDR YP_001185575 146305110 5106254 PFAM: short-chain dehydrogenase/reductase SDR Cytoplasmic[Class 3] TIGR01831|fabG_rel|3-oxoacyl-(acyl-carrier-protein) reductase, putative|hypoth_equivalog|1.1e-32||Fatty acid and phospholipid metabolism|Biosynthesis PF08659|KR, KR domain|6|168|3e-12 COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ; COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ATGCGCAAGAATCTGCTGATCACCGGTGCCAGCCGCGGCATCGGCCGTGCCACGGCCCTGCTGGCCGCCGCGGGCGGCTGGACGGTCGGGGTGAACTATCGCAGCGACCGCGCCGCCGCCGATGAGGTGGTGGCGCAGATCGAAGCCATGGGCGGCACAGCCGTCGCCCTGCCTGGCGACGTGGCCAATGAGCAAGAGGTGCAGCGCCTGTTCGAGGCCATGGACAGGCTCGGCCCGCTGCACGGTCTGGTGGTCAATGCCGGCATCGTCGCACCGCCCCTGCCGCTGCTGGAGATGAGCGGCGAGCGCCTGCGGCGCATGTTCGACGTCAACGTGCTGGGCAGCTACCTGACCGCGCGCGAAGGCGCCCGGCGCATGGCGCGCAGTCGCGGCGGCGAAGGTGGCTCGATGGTGCTGGTGTCTTCGGTGGCCGCCAGCCTGGGCGCGCCGTTCGAATATGTCGACTACGCCGGCGCCAAGGGTGCCATGGACGTGCTGACCCGCGGCCTGGCCAAGGAGCTGGGCGGTGAGGGTGTACGGGTCAATGCCGTGCGGCCGGGGCTGATCGACACCGAGATCCACGCCAGCGGCGGCCAGCCGGATCGCGCCGAGCGCCTCGGCAAGGCCACCCCGCTGGGCCGCGCCGGCCGCGCGGAGGAGGTTGCCGAGGCCATCGTCTGGCTGCTCGATGACAAGGCCAGCTACACCACCGGTGCGCTGATCGATATTGCCGGCGGGCGTTGA MRKNLLITGASRGIGRATALLAAAGGWTVGVNYRSDRAAADEVVAQIEAMGGTAVALPGDVANEQEVQRLFEAMDRLGPLHGLVVNAGIVAPPLPLLEMSGERLRRMFDVNVLGSYLTAREGARRMARSRGGEGGSMVLVSSVAASLGAPFEYVDYAGAKGAMDVLTRGLAKELGGEGVRVNAVRPGLIDTEIHASGGQPDRAERLGKATPLGRAGRAEEVAEAIVWLLDDKASYTTGALIDIAGGR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0070 CDS 67576 68385 - tryptophan synthase, alpha subunit YP_001185576 146305111 5106255 TIGRFAM: tryptophan synthase, alpha subunit PFAM: tryptophan synthase, alpha chain 4.2.1.20 Unknown[Class 3] biological_process|GO:0000162|tryptophan biosynthetic process|IEA ; molecular_function|GO:0004834|tryptophan synthase activity|IEA TIGR00262|trpA|tryptophan synthase, alpha subunit|equivalog|4.4e-79|4.2.1.20|Amino acid biosynthesis|Aromatic amino acid family PF00290|Trp_syntA, Tryptophan synthase alpha chain|8|265|8e-90 COG0159|TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. ; COG0159|TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. ATGAGCCGCCTGCAGAACCGTTTCGCCGAACTGAAAGCGGAAAACCGCGCCGCGCTGGTGACCTTCGTCACCGCCGGTGATCCCGACTACGCCACCTCGCTGAGCATTCTCAAGGGCCTGCCGGAGGCCGGCGCCGACGTGATCGAGCTGGGCATGCCCTTCACCGACCCGATGGCCGACGGCCCGGCCATCCAGCTCGCCAACATCCGCGCACTGGCCGGCAAGCAGGGCATGCAGCAGACGCTGCAGATGGTTCGCGAATTCCGCGCCGGCAACCAGAGCACGCCGCTGGTGCTGATGGGCTACTACAACCCGATCTTCGTCTACGGCGTCGAGCGCTTCATCAGCGACGCCAAAGAGGCCGGCGTCGACGGCCTGATCGTGGTCGACCTGCCGCCGGAGCACAACGACGAGCTGTGCGAACCGGCGCAGAGCGCAGGTCTGGATTTCATCCGCCTGACTACCCCGACCACCGACGACGACCGCCTGCCCACCGTGCTGGCCGGCAGCTCCGGCTTCGTCTACTACGTGTCGGTGGCCGGTGTCACCGGCGCCGGTGCGGCGACCCTGGATCATGTCGAGGAAGCCGTGGCGCGCCTGCGTCGCCACACCGACCTGCCCGTTTGCATCGGCTTCGGCATCCGCACCCCGGAGCACGCCGCCGAAGTGGCCAAGCGCGCCGAGGGCGCGGTGGTCGGCTCGGCGCTGATCGACAAGATCGCCGAGGCGAAGAGCCCGCAGCAGGCCATCGACGGCGTACTCGGCCTGTGCCGCGAACTGGCCGAAGGGGTACGCGGCGCGCGCCGCTGA MSRLQNRFAELKAENRAALVTFVTAGDPDYATSLSILKGLPEAGADVIELGMPFTDPMADGPAIQLANIRALAGKQGMQQTLQMVREFRAGNQSTPLVLMGYYNPIFVYGVERFISDAKEAGVDGLIVVDLPPEHNDELCEPAQSAGLDFIRLTTPTTDDDRLPTVLAGSSGFVYYVSVAGVTGAGAATLDHVEEAVARLRRHTDLPVCIGFGIRTPEHAAEVAKRAEGAVVGSALIDKIAEAKSPQQAIDGVLGLCRELAEGVRGARR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0071 CDS 68382 69617 - tryptophan synthase, beta subunit YP_001185577 146305112 5106256 TIGRFAM: tryptophan synthase, beta subunit PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit Unknown[Class 3] biological_process|GO:0000162|tryptophan biosynthetic process|IEA ; molecular_function|GO:0004834|tryptophan synthase activity|IEA TIGR00263|trpB|tryptophan synthase, beta subunit|equivalog|4.5e-292|4.2.1.20|Amino acid biosynthesis|Aromatic amino acid family PF00291|PALP, Pyridoxal-phosphate dependent enzyme|64|390|2e-62 COG0133|TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. ; COG0133|TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. ATGACAGCCATGCCTGGTTCACAGAATTCTTTCCGCACCGGCCCCGACGCTCGCGGCCTGTTCGGCCGCTTCGGCGGTCAGTTCGTCGCCGAAACCCTGATGCCGCTGATCAACTCGCTGGCCGCCGAATACGAAAAGGCCAAGAGCGATCCGGCCTTCCTCGAAGAACTGGCCTACTTCCAGCGCGACTACATCGGTCGCGCCAGCCCGCTTTACTACGCCGAGCGCCTGAGCCAGCACTTCGGCGGCGCGAAGATCTACCTCAAGCGCGAAGACCTGAACCACACCGGCGCGCACAAGATCAACAACTGCATCGGCCAGATCCTCCTGGCCAAGCGCATGGGCAAGCAGCGCATCATCGCCGAGACCGGCGCCGGCATGCACGGCGTGGCCACCGCCACCGTGGCCGCGCGCTTCGGCATGCAGTGCGTGGTGTACATGGGCACCACCGACATCGACCGCCAGCAGGCCAACGTCTTTCGCATGAAGCTGCTCGGCGCCGAGGTAATTCCGGTCACCGCCGGCACCGGCACCCTCAAGGACGCCATGAACGAGGCCCTGCGCGACTGGGTGACCAACGTCCACAACACCTTCTACCTGATCGGCACCGCCGCCGGCCCGCACCCGTACCCGGCCATGGTCCGCGACTTCCAGTCGGTGATCGGCAACGAAGTGCGTGAGCAGATCCTGGCGAAGGAAGGGCGTCTGCCCGACTCGCTGGTGGCCTGCATCGGTGGTGGCTCCAACGCCATCGGCCTGTTCCACCCCTTCCTCGATGATGAAGGCGTGCAGATCATCGGCGTCGAGGCGGCCGGCCACGGCATCGACACCGGCAAGCATGCGGCGAGCATGGCCGGCGGCGCGCCGGGCGTGCTGCACGGCAACCGCACCTTCCTGCTGCAGGACGAGGACGGCCAGATCACCGATGCCCACTCGATTTCCGCCGGCCTCGATTACCCCGGCGTCGGCCCGGAACACGCCTGGTTGCACGAGATCAAGCGCGTCGAATACGTGCCGATCAGCGATGACGAAGCCCTCGAAGCCTTCCACCACTGCTGCCGCCTGGAAGGCATCATCCCGGCCCTGGAAAGCGCTCATGCGCTGGCCGAAGCCTTCAAGCGTGCGCCGAAACTGCCCAAGGATCACCTGATGGTGATCAACCTGTCCGGTCGTGGCGACAAGGACATGCAGACCGTGATGCACCACATGCAGGACAACCAGGAGAAACACGCATGA MTAMPGSQNSFRTGPDARGLFGRFGGQFVAETLMPLINSLAAEYEKAKSDPAFLEELAYFQRDYIGRASPLYYAERLSQHFGGAKIYLKREDLNHTGAHKINNCIGQILLAKRMGKQRIIAETGAGMHGVATATVAARFGMQCVVYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVHNTFYLIGTAAGPHPYPAMVRDFQSVIGNEVREQILAKEGRLPDSLVACIGGGSNAIGLFHPFLDDEGVQIIGVEAAGHGIDTGKHAASMAGGAPGVLHGNRTFLLQDEDGQITDAHSISAGLDYPGVGPEHAWLHEIKRVEYVPISDDEALEAFHHCCRLEGIIPALESAHALAEAFKRAPKLPKDHLMVINLSGRGDKDMQTVMHHMQDNQEKHA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0072 CDS 69732 70400 + hypothetical protein YP_001185578 146305113 5106257 Cytoplasmic Membrane[Class 3] ATGAAGGATCGCTGGTTATGGACTTTTCCCGTGGTAGGCGCTTTTCTTGTTGCCATCGCATTGGTACTACAAATTCACAGATGGAACGAAGAGGAGCGCATGTTGCGAACGACCGGCAGTGTGGTGGCGGTGATGGGCAGGGGTTGTCCTCTCGTCGAGTTCTTCCCCCTTCCGGGGGAGCGAGTCACCTTCACTGGCGAGGTCTGCAGCCGGCCTGGTTATGCCAAAGGCGATATTGTCGAGCTGTTCTACGACCCCTTGGAGCCGCAGAACGCGCATATCGATAGCTTTCTGCAGAACTGGTTCGTCAGCCTGATACTAGGTGGCATTGGTCTGTTCTTTACGTTAGTCGGTCTGGCTCTGTTAATGCCCGAGGCGCTTGTCGACGGTCGGCGCAATCGACTCAAACGTAAAGGCCAGGCCGTACAGGCACAGTTCGTGGAGGTCCGGCGCAACCCGCTTTCCACCCTCAACAACGTGCCGGCCTGGCAACTGGTCTGCCAGTGGTACAACCCGAGCAGCGGCGCGGTACATCTGTTCTACAGCGAAGACCTGTGGTTCGACCCGCAGCCGTTTATCGAGAATGAATTTCTGCAGGTAATGGTCGATCCCGATGACCTTCGGCGTTATAGCGTCGATACCAGCTTCCTACCGCGCCTGGCAGATTGA MKDRWLWTFPVVGAFLVAIALVLQIHRWNEEERMLRTTGSVVAVMGRGCPLVEFFPLPGERVTFTGEVCSRPGYAKGDIVELFYDPLEPQNAHIDSFLQNWFVSLILGGIGLFFTLVGLALLMPEALVDGRRNRLKRKGQAVQAQFVEVRRNPLSTLNNVPAWQLVCQWYNPSSGAVHLFYSEDLWFDPQPFIENEFLQVMVDPDDLRRYSVDTSFLPRLAD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0073 CDS 70405 71316 + transcriptional regulator, LysR family YP_001185579 146305114 5106258 PFAM: regulatory protein, LysR Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|3.3e-22||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|90|293|5e-11 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGAATCGCGACCTGCCCCCGCTAAACGCTCTGCGCGCCTTCGAAGCGGCTGCCCGCCTGCAAAGCGTCAGCCGCGCCGGCGAGGAGCTGCACGTCACCCATGGCGCGATCAGCCGCCAGATCCGCGTGCTGGAGGAGCAACTTGGCGTCAGCCTGTTCGACAAGGACGGCCGCGGCGTGAAACTCACCGAGGCCGGGGTGCGCCTGCGCGATGCGGCGGGCGATGCCTTCGAGCGTCTGCGTGGGGTCTGCGCCGAGATCCGCCAACGCCAGGAGGGCGCCCCCTTCGTGCTCGGCTGTCCCGGCAGTCTGCTGGCGCGCTGGTTCATTCCCCGCCTGGATCGCCTGAACCGCGATCTGCCCGAGTTGCGTCTACAGCTGTCGGCCAGCGAGGGTGAGCTGGACCCGCGCCGGCCCGGTGTGGACGCCACACTGTGTTTCGCCACGCCGCCCTGGCCGGCGGATGTACAGGTGCATGAACTGGACACCGAGCGCATCGGGCCGGTGCTCAGCCCGCGCTATGCCGGGTATGAGGCTCTGCGGGGTGCGCCCGCCGCCGCGCTGCTCGGCGAGCCGCTGCTGCATACCGTGTCGCGGCCACAGGCCTGGCCGCAATGGGCGCTGGCGCAGGGGCTGGAGCCGGCGCGCCTGCAGCAGGGGCAAGGCTTCGAACATCTCTACTACCTGCTGGAGGCTGCCGCCGCAGGGCTTGGCGTGGCCATCGCGCCGCAGCAATTGGTGGCGGACGATCTGGCCGCCGGGCGCCTGCTGGCGCCCTGGGGCTTCGTCGAGACAGGGGCAAAACTGGCCCTGTGGGTGCCGGGCCGAGGGCATGACCTGCGTGCCGAGCGCCTGGCCGGCTGGCTGGCCGCGGAGCTGAACGGACTTGCTGCGCTTCGGTCGCCGGTATAG MNRDLPPLNALRAFEAAARLQSVSRAGEELHVTHGAISRQIRVLEEQLGVSLFDKDGRGVKLTEAGVRLRDAAGDAFERLRGVCAEIRQRQEGAPFVLGCPGSLLARWFIPRLDRLNRDLPELRLQLSASEGELDPRRPGVDATLCFATPPWPADVQVHELDTERIGPVLSPRYAGYEALRGAPAAALLGEPLLHTVSRPQAWPQWALAQGLEPARLQQGQGFEHLYYLLEAAAAGLGVAIAPQQLVADDLAAGRLLAPWGFVETGAKLALWVPGRGHDLRAERLAGWLAAELNGLAALRSPV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0074 CDS 71370 71609 + hypothetical protein YP_001185580 146305115 5106259 Cytoplasmic[Class 3] ATGAAAGAAAGTCGTGACTATCTGGAGATGGCCTTCCGCTCCATCAAATGCTTCGCCGATGACGGCAAGCTGCTGGTTCACGAGCTCGAAAGCCTGGTCGATATCGCCCGCCGCGACGGCGTGGTCGATGCCAACGAGAAGCGCATCCTGCAGGGCATCGTCGCCCGCCTGAACCCCGCCGAACTGACCGCCGACATGCAGACCAAGATCGCTGCGCTGAGGGCCGAGCTGCAGTTTTGA MKESRDYLEMAFRSIKCFADDGKLLVHELESLVDIARRDGVVDANEKRILQGIVARLNPAELTADMQTKIAALRAELQF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0075 CDS 71708 71923 + protein of unknown function DUF1458 YP_001185581 146305116 5106260 PFAM: protein of unknown function DUF1458 Unknown[Class 3] PF07311|DUF1458, Protein of unknown function (DUF1458)|5|70|4e-25 COG3360|COG3360, Uncharacterized conserved protein [Function unknown]. ; COG3360|COG3360, Uncharacterized conserved protein [Function unknown]. ATGACCGATCACCACACCTACAAGAAGATCGAAATCGTTGGTTCATCGCGAACCAGCATCGAGGACGCCATCGAGAACGCCCTGAGTGAGTGCGCCAAGAGCGTACGCAACATGGACTGGTTCGAGGTGGTGGAAACCCGTGGCCATATCGAGGACGGCAAGGTGGGTCACTACCAGGTCACCCTCAAGGTCGGCTTTCGCCTGAGCGGTAGCTGA MTDHHTYKKIEIVGSSRTSIEDAIENALSECAKSVRNMDWFEVVETRGHIEDGKVGHYQVTLKVGFRLSGS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0076 CDS 71892 72869 - NAD-dependent epimerase/dehydratase YP_001185582 146305117 5106261 PFAM: NAD-dependent epimerase/dehydratase Cytoplasmic[Class 3] TIGR01777|yfcH|conserved hypothet