Strain Refseq Accession (Replicon) Replicon Name Locus Tag Feature Type Start Stop Strand Gene Name Product Name Product Name Rating Refseq Accession GI Entrez Alternate Gene Name(s) Alternate Product Names Comments References Genomic Context Homology Structure Features Pathways EC Number PseudoCAP Function Class Subcellular Localization (Localization[Localization Confidence] Gene Ontology Mappings(NameSpace|Accession|Term|Evidence Code) TIGRFAM Predictions Using HMMER (Accession|Name|Function|IsologyType|Significance|EC Number|Role|Sub-role) PFAM Predictions (Accession|Name|Start|Stop|E-value) COG Predictions (Accession|Name[Category])DNA Sequence Protein Sequence Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0001 CDS 82 1566 + dnaA chromosomal replication initiation protein YP_001185508.1 146305043 5105694 TIGRFAM: chromosomal replication initiator protein DnaAPFAM: Chromosomal replication initiator, DnaA C-terminal domain ; binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. Cytoplasmic[Class 3] biological_process|GO:0006270|DNA replication initiation|IEA ; biological_process|GO:0006275|regulation of DNA replication|IEA ; molecular_function|GO:0003677|DNA binding|IEA ; molecular_function|GO:0003688|DNA replication origin binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA TIGR00362|DnaA|chromosomal replication initiator protein DnaA|equivalog|3e-284||DNA metabolism|DNA replication, recombination, and repair PF00308|Bac_DnaA, Bacterial dnaA protein|159|377|1e-107 ; PF08299|Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain|402|471|4e-30 COG0593|DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. GTGGAACTATGGCAGCAGTGCGTCGAGCTTCTGCGCGACGAATTGCCGGCTCAGCAATTCAACACCTGGATCCGTCCTCTGCAGGTCGAAGCCGAAGGCGACGAGCTGCGCGTCTACGCGCCCAATCGTTTTGTGCTCGACTGGGTCAACGAAAAGTACCTGAGCCGCCTGCTCGAGTTGCTGGGTGAGCGCGCCGGGGGCCTGGTGCCGGCGCTTTCCTTATTGATAGGCAGCAAGCGAGCGGCTACCGCTCGGGTCGCACCTACCGCGCCCTTGCCTGCCGCAGCGCGTGCGGCGCAGGTTCAGGCAGCCGCCACGGCGAGCAAGCCGGTACCACCGCCCGCCCAGGAAGAACCCTCGCGCGCCAGCTTCGACTCCATGGCCGGCGCCGCGCCGCAGCCACCAACCCCAGCCGTCGCACCGCGTGCCGAGCGCACCGTGCAGGTCGAGGGCGGGCTCAAGCACACCAGTTACCTCAACCGCACCTTCACCTTCGACAATTTCGTCGAGGGCAAGTCCAACCAGTTGGCGCGCGCCGCTGCCTGGCAGGTTGCGGACAATCCCAAGCACGGTTACAACCCGCTGTTCCTTTATGGCGGCGTGGGCCTGGGCAAGACGCACCTGATGCACGCCGTGGGTAACCACCTGCTGGCGAAGAACCCCAACGCCAAGGTGGTGTACCTGCATTCCGAGCGCTTCGTCGCCGACATGGTCAAGGCGCTGCAGCTCAACGCCATCAACGAATTCAAACGCTTCTACCGTTCGGTGGACGCGCTGCTGATCGACGATATCCAGTTCTTCGCCAAGAAAGAGCGTTCCCAGGAAGAGTTCTTCCACACCTTCAACGCCCTGCTCGAAGGCGGCCAACAGGTGATCCTCACCAGCGACCGCTACCCGAAGGAGATCGAAGGCCTGGAAGAGCGCTTGAAGTCTCGTTTCGGCTGGGGCCTGACCGTGGCCGTCGAGCCGCCGGAGCTGGAAACCCGCGTGGCGATCCTGATGAAGAAGGCCGACCAGGCCAAGGTCGAGCTGCCGCACGATGCCGCATTCTTCATTGCCCAGCGCATTCGCTCCAACGTGCGTGAGCTGGAAGGTGCGCTGAAACGGGTGATCGCCCACTCGCACTTCATGGGCCGCGATATCACCATCGAGCTGATCCGCGAATCCCTCAAGGATCTGCTGGCCCTGCAGGACAAGCTGGTCAGCATCGACAATATCCAGCGCACCACGGCCGAGTACTACAAGATCAAGATTTCCGATCTGCTGTCCAAGCGTCGCTCACGCTCCATCGCCCGGCCACGCCAGGTGGCCATGGCATTGTCGAAGGAGCTGACCAACCACAGCCTGCCGGAAATCGGTGTGGCCTTCGGCGGTCGCGATCACACCACGGTATTGCACGCATGCCGTAAGATTGCTGAACTTAGGGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGCACCCTCACTACCTGA MELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRLLELLGERAGGLVPALSLLIGSKRAATARVAPTAPLPAAARAAQVQAAATASKPVPPPAQEEPSRASFDSMAGAAPQPPTPAVAPRAERTVQVEGGLKHTSYLNRTFTFDNFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLAKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSIDNIQRTTAEYYKIKISDLLSKRRSRSIARPRQVAMALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAELRESDADIREDYKNLLRTLTT Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0002 CDS 1601 2704 + DNA polymerase III subunit beta YP_001185509.1 146305044 5106313 TIGRFAM: DNA polymerase III, beta subunitPFAM: DNA polymerase III, beta chain ; binds the polymerase to DNA and acts as a sliding clamp Purine metabolism [KEGG] ; Pyrimidine metabolism [KEGG] ; Metabolic pathways [KEGG] ; DNA replication [KEGG] ; Mismatch repair [KEGG] ; Homologous recombination [KEGG] 2.7.7.7 Cytoplasmic[Class 3] biological_process|GO:0006260|DNA replication|IEA ; cellular_component|GO:0009360|DNA polymerase III complex|IEA ; molecular_function|GO:0003887|DNA-directed DNA polymerase activity|IEA TIGR00663|dnan|DNA polymerase III, beta subunit|equivalog|2.8e-117|2.7.7.7|DNA metabolism|DNA replication, recombination, and repair PF02767|DNA_pol3_beta_2, DNA polymerase III beta subunit, central domain|129|244|2e-40 ; PF00712|DNA_pol3_beta, DNA polymerase III beta subunit, N-terminal domain|1|120|8e-43 ; PF02768|DNA_pol3_beta_3, DNA polymerase III beta subunit, C-terminal domain|246|366|7e-38 COG0592|DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTCGTGGAACGACGCCAGACGCTGCCGGTGTTGTCCAACGTCCTGCTGGTGGTCGAAGGCCAGCAGCTCTCGCTTACCGGTACCGACCTGGAGGTCGAACTGGTTGGCCGCGTCACCCTCGAAGACGCTGCCGAGCCGGGCGAAATCACCGTACCGGCGCGCAAGCTGATGGATATCTGCAAGAGCCTGCCGAGCGATGCGCTGATCGATATCCGCGTCGATGACCAGAAGCTGCTGGTCAAGGCCGGGCGCAGTCGTTTCACCCTGTCGACGCTGCCGGCCAATGACTTCCCCACCGTCGAGGAAGGTCCGGGTTCGCTGACCTTCAACCTGCCGCAGGCCAAGCTGCGTCGCCTGATCGAACGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGCTACTACCTCAACGGCATGCTGCTGGAGGTGCAAAGCGGCATGCTGCGCGCCGTCGCTACCGACGGTCACCGTCTGGCGATGTGCTCCATGGAGGCGGCCATCCAGCAGGACGGCAAGCATCAGGTGATCGTGCCGCGCAAAGGTATTCTCGAGCTGGCCCGTCTGCTCACCGAGCAGGATGCCGAAGTCGCCATCGTGCTGGGGCAGCACCACATTCGCGCCAACACCGGCGAATTCACCTTCACCTCGAAACTGGTGGACGGCAAGTTCCCGGATTACGAGCGCGTGCTGCCGCGTGGCGGTGACAAGCTGGTGCTGGCCGACCGTCAGGGCCTGCGTGAGGCCTTCAGCCGTACCGCGATCCTGTCCAACGAGAAGTACCGTGGCATTCGTCTGACCCTGGCTGCCGGTCTGCTGAAGATCCAGGCCAACAACCCGGAGCAGGAAGAGGCCGAGGAAGAGATCGTCGTCGACTACGCTGGCGGCGGTCTGGAAATCGGTTTCAACGTCAGCTACCTGCTGGACGTACTGGGCGTGATGGGCACCGAGCAGGTACGCCTGATCCTGTCCGATTCCAACAGCAGTGCCCTGCTGCAGGAAGCCGACAACGATGATTCGGCCTATGTCGTCATGCCGATGAGGCTCTAA MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVTLEDAAEPGEITVPARKLMDICKSLPSDALIDIRVDDQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLTFNLPQAKLRRLIERTSFAMAQQDVRYYLNGMLLEVQSGMLRAVATDGHRLAMCSMEAAIQQDGKHQVIVPRKGILELARLLTEQDAEVAIVLGQHHIRANTGEFTFTSKLVDGKFPDYERVLPRGGDKLVLADRQGLREAFSRTAILSNEKYRGIRLTLAAGLLKIQANNPEQEEAEEEIVVDYAGGGLEIGFNVSYLLDVLGVMGTEQVRLILSDSNSSALLQEADNDDSAYVVMPMRL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0003 CDS 2712 3815 + recF recombination protein F YP_001185510.1 146305045 5106678 TIGRFAM: DNA replication and repair protein RecFPFAM: SMC domain protein ; Required for DNA replication; binds preferentially to single-stranded, linear DNA Homologous recombination [KEGG] Cytoplasmic[Class 3] biological_process|GO:0006260|DNA replication|IEA ; biological_process|GO:0006281|DNA repair|IEA ; biological_process|GO:0006310|DNA recombination|IEA ; biological_process|GO:0009432|SOS response|IEA ; molecular_function|GO:0003697|single-stranded DNA binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA TIGR00611|recf|DNA replication and repair protein RecF|subfamily|1.6e-141||DNA metabolism|DNA replication, recombination, and repair PF02463|SMC_N, RecF/RecN/SMC N terminal domain|3|158|8e-24 COG1195|RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ATGTCCCTGAGCCGCATCATGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCCTCTCCCCCTCCCCCCGCATCAACATCCTTCACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTCGAGGCCATTCATCTGCTCGGCCTCGCCCGCTCCTTCCGCAGCACCCGCCTGCAGCCTGTCATCCATTACGAACAACCGGCCTGCACCGTTTTTGGCCAGGTGCAGTTGGCCGAAGGTGGCTCCAGCAATCTGGGGATTTCGCGTGACCGTCAGGGCGAGCTGCAGATTCGTATCGACGGGCAGAATGCGCGTAGCGCTGCGCAGCTGGCCGATCTGTTGCCTTTGCAGTTGATCAACCCGGACAGCTTTCGCCTGCTGGAAGGCGCACCGAAGATTCGCAGGCAGTTTCTCGATTGGGGGGTGTTCCACGTGGAACATCGTTTTCTCGGCGCCTGGCAACGCCTGCAGAAAGCCCTGCGGCAGCGGAACTCGTGGCTGCGCCATGGTACACTTGACGGTGCTTCGCAGGCCGCATGGGACCGAGAGCTGTGCAGTGCGAGCCAGGAAATCGACACCTACCGTAGAGCCTATATCCAGGCGCTGAAGCCGGTGTTCGAACGCACGTTGGCGGAACTGCTGCAGCTGGAAGGGTTGACCCTGAGCTATTACCGCGGCTGGGACAAGGATCGTGAGCTGAGCGAAGTGCTCGCCTCGTCTCTCCTTCGTGATCAACAGCTCGGGCATACCCAGGCCGGACCGCAGCGCGCCGATCTGCGTCTGCGGCTTGCGGGGCATAACGCGGCGGAAATCCTGTCGCGAGGACAACAGAAACTGGTGGTGTGTGCGTTGCGCATCGCCCAGGGCCACTTGGTCAATGAAGCCAAGCGTGGCCAATGTATCTATCTGGTGGACGATCTACCGTCGGAACTGGATGAGCAGCATCGTCAGGCATTGTGCCGGTTGCTGGAAGATTTGCACTGCCAGGTGTTCATCACCTGTGTGGATCATGAATTGTTGAGGGAAGGCTGGCACACGGATACGCCGGTTGCCATGTTCCACGTGGAACATGGCCGTATCACCCAGACCCAAGACCATCGGGAGTGA MSLSRIMVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSTRLQPVIHYEQPACTVFGQVQLAEGGSSNLGISRDRQGELQIRIDGQNARSAAQLADLLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEHRFLGAWQRLQKALRQRNSWLRHGTLDGASQAAWDRELCSASQEIDTYRRAYIQALKPVFERTLAELLQLEGLTLSYYRGWDKDRELSEVLASSLLRDQQLGHTQAGPQRADLRLRLAGHNAAEILSRGQQKLVVCALRIAQGHLVNEAKRGQCIYLVDDLPSELDEQHRQALCRLLEDLHCQVFITCVDHELLREGWHTDTPVAMFHVEHGRITQTQDHRE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0004 CDS 3820 6240 + gyrB DNA gyrase subunit B YP_001185511.1 146305046 5106679 TIGRFAM: DNA gyrase, B subunitPFAM: DNA gyrase, subunit B domain protein ; negatively supercoils closed circular double-stranded DNA 5.99.1.3 Cytoplasmic[Class 3] biological_process|GO:0006265|DNA topological change|IEA ; cellular_component|GO:0009330|DNA topoisomerase complex (ATP-hydrolyzing)|IEA ; molecular_function|GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity|IEA TIGR01059|gyrB|DNA gyrase, B subunit|equivalog|0|5.99.1.3|DNA metabolism|DNA replication, recombination, and repair PF00204|DNA_gyraseB, DNA gyrase B|222|391|3e-58 ; PF00986|DNA_gyraseB_C, DNA gyrase B subunit, carboxyl terminus|733|795|5e-32 ; PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|34|142|8e-16 COG0187|GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ATGAGCGAGAATCAAACGTACGACTCCTCCAGCATCAAGGTGCTGAAAGGACTGGACGCCGTACGCAAACGTCCCGGGATGTACATCGGTGACACTGACGATGGCAGTGGTCTGCACCACATGGTGTTCGAGGTGGTCGATAACTCCATCGACGAAGCGCTGGCCGGCTATTGCAGCGAGATCGTCATCACCATTCACCCTGACGAATCGATCAGCGTACGTGACAACGGTCGCGGCATTCCGGTGGACATCCACAAGGAAGAAGGCGTTTCCGCGGCCGAGGTCATCATGACCGTGCTGCACGCCGGCGGTAAGTTCGATGACAACACCTACAAGGTGTCCGGCGGTCTGCACGGCGTGGGTGTATCGGTGGTGAACGCGCTGTCCGAAGAGCTGCGCCTGACCATCCGCCGCGCTGGCAAGGTGTGGGAGCAGATCTATCACCACGGCGTGCCGCAAGCGCCGCTGGCTACTGTCGGCGACACCGATGGCACTGGTACCGAGATTCACTTCAAGGCATCTGCCGAGACCTTCAGCAACATCCATTTCAGCTGGGATATCCTGGCCAAGCGCCTGCGCGAGCTGTCGTTCCTCAACTCCGGCGTGGGCATCCTGCTGCGTGACGAGCGTTCCGGCAAGGAAGAGCTGTTCAAGTACGAAGGCGGTCTGAAGGCCTTCGTCGAGTACCTCAACACCAACAAGAACGTGGTGAACCAGGTATTCCACTTCAACATCCAGCGCGAGGAAGATGGTGTTGGCGTGGAAGTGGCCCTGCAGTGGAACGACAGCTTCAACGAGAACATCCTCTGCTTCACCAACAACATTCCGCAGCGTGACGGTGGTACCCACCTGGCAGGCTTCCGCTCTGCCCTCACCCGCCACCTGAACAACTACATCGAGCAGGAAGGTCTGGCGAAGAAGTTCAAGGTCGCCACCACTGGCGATGACGCCCGTGAAGGCCTGACCGCAATCATCTCGGTCAAGGTGCCGGACCCGAAATTCAGCTCGCAGACCAAGGACAAGCTGGTTTCCAGCGAGGTGAAAACCGCTGTCGAGCAGGAGATGGGCAAGTACTTTGCCGACTTCCTGCTGGAGAATCCCAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGTGAAGCGGCGCGGAAGGCGCGTGAAATGACCCGCCGCAAGGGCGCTCTGGACATTGCCGGTCTGCCCGGCAAACTGGCCGACTGTCAGGAAAAAGACCCGGCGCTGTCCGAACTCTACATCGTGGAGGGTGACTCCGCGGGCGGTTCTGCCAAGCAGGGCCGTAACCGCAAGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAGAAGGCGCGCTTCGACAAGATGCTCTCCTCTGCCGAAGTCGGTACCCTGATCACCGCACTGGGCTGCGGTATCGGACGCGAGGAGTACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGATGCTGACGTTGACGGTTCGCACATCCGTACTCTGCTGCTGACCTTCTTCTTCCGTCAGCTGCCGGAGCTGATCGAGCGTGGCTACGTCTACATCGCCCAGCCGCCGCTGTACAAGGTCAAGAAGGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGACGAATACATGACCCAGTCGGCCCTGGAAGACGCCAGCCTGCACGTCAACGAGAACGCTCCTGGCCTGTCCGGCGGTGCTCTGGAGAAGCTGGTTGGTGAATACCGCGGCGTGATGAAGACCCTGGACCGCCTGTCGCGCGTGTATCCGAAGGAAATCACCGAGCACTTCGTCTACCTGCCGCGCATCGGCCTTGAACAGCTAGCTGATCATGCCGGCATGCAGGCCTGGCTGGAGCAGTTCAGCGCCCGTCTGAAGACGATGGAAAAGTCCGGCCAGACCTACACTGCCAGCCTGCGCGAAGACCGCGAGCGCCATGTCTGGCTGCCTGAGGTAGAGGTCAAGGCGCATGGTCTGTCCAGCTACACCACCTTCAACCGCGACTTCTTCGCCAGCAATGACTACAAGACAGTCACGGCCCTGGGCGACCAGCTGAACAACCTGCTGGAAGACAGCGCCTACGTACAGCGCGGCGAACGCAAGAAGCCGGTGGCGACCTTCAAGGAAGCGCTGGACTGGCTGATGGCCGAGAGCACCAAGCGCCACAGTATCCAGCGCTATAAGGGTCTCGGCGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGATCCGGAAGTGCGACGCATGCTCAAGGTGACCATCGAAGACGCCATCGCGGCGGACCAGATCTTCAACACCCTGATGGGCGACGCCGTGGAGCCGCGCCGCGACTTCATCGAGTCCAATGCCCTGGCGGTGTCGAATCTGGACTTCTGA MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCSEIVITIHPDESISVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSVVNALSEELRLTIRRAGKVWEQIYHHGVPQAPLATVGDTDGTGTEIHFKASAETFSNIHFSWDILAKRLRELSFLNSGVGILLRDERSGKEELFKYEGGLKAFVEYLNTNKNVVNQVFHFNIQREEDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRHLNNYIEQEGLAKKFKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKKGKQEQYIKDDEAMDEYMTQSALEDASLHVNENAPGLSGGALEKLVGEYRGVMKTLDRLSRVYPKEITEHFVYLPRIGLEQLADHAGMQAWLEQFSARLKTMEKSGQTYTASLREDRERHVWLPEVEVKAHGLSSYTTFNRDFFASNDYKTVTALGDQLNNLLEDSAYVQRGERKKPVATFKEALDWLMAESTKRHSIQRYKGLGEMNPDQLWETTMDPEVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALAVSNLDF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0005 CDS 6506 7438 - phosphatidate cytidylyltransferase YP_001185512.1 146305047 5106680 PFAM: phosphatidate cytidylyltransferase Glycerophospholipid metabolism [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic Membrane[Class 3] PF01148|CTP_transf_1, Cytidylyltransferase family|43|308|1e-44 COG4589|COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]. ATGGATCGCAATACCCTGCTGCTGTTCGCCGGTATCGGTGCCCTGCTCCTGCTGGCCAGCCTGGTCGGTTTCGTCCTCAAGCGGCGCAGTGGCGATCAACCCAACCCGGTGATCGACAACCTCAACGCGCGGATCAATGCCTGGTGGGTGATGGTGCTGGTGATCGGCATCGCCTTCCTGTTCGGCAACATCGGCGTCGTGGTGCTGTTCTACTTCGTCTCCTTCTACGCCCTGCGCGAGTTCATGACCCTGACGCCAACCCGGCGCAGCGACTATCCGGCGCTGGTGGCGGCCTTCTATTTCGCCCTGCCGATGCAGTACCTGCTGATCGCCCTGGACTGGTACGGCCTGTTCGCCATCTTCATCCCGGTCTACCTGTTCCTGCTGCTGCCGATCCTTGCCTCGCTGGGCGGCGACACCACGCGTTATCTGGAGCGCGCGGCCAAGGCGCAATGGGGCTTGATGATCGCGGTGTACTGCATCTCCTCGGTACCGGCCCTGCTGACCCTGGACATTCCCGGCTACGAGGGGCGCAACCTGCTGCTGATCGCCTGGCTGATCATCGTCGTGCAGCTCTCCGACGTGCTGCAGTACGTGTGCGGCAAGCTGTTCGGCAAGCACAAGATCGCCCCCAGCCTGTCGCCCTCGAAGACCGTGGAAGGCTTCGTCGGCGGCGTCGCCCTGGCCACGCTGATTGGCGGCCTGCTGTGCTGGATTACTCCCTTCGCCTTCTGGCAGGCGGCACTCTTTGCCCTGCTGGTATGCCTGCTCGGCTTCGCCGGTGGCCTGGTGATGTCGGCGATCAAGCGCGACCGCGGGGTGAAGGACTGGGGCCATATGATCGAAGGCCATGGCGGCATGCTCGACCGCCTGGACTCCGTATGTTTCGCCGCACCGGTGTTCTTCCATATGGTGCGTTACTGGTGGGCCTAG MDRNTLLLFAGIGALLLLASLVGFVLKRRSGDQPNPVIDNLNARINAWWVMVLVIGIAFLFGNIGVVVLFYFVSFYALREFMTLTPTRRSDYPALVAAFYFALPMQYLLIALDWYGLFAIFIPVYLFLLLPILASLGGDTTRYLERAAKAQWGLMIAVYCISSVPALLTLDIPGYEGRNLLLIAWLIIVVQLSDVLQYVCGKLFGKHKIAPSLSPSKTVEGFVGGVALATLIGGLLCWITPFAFWQAALFALLVCLLGFAGGLVMSAIKRDRGVKDWGHMIEGHGGMLDRLDSVCFAAPVFFHMVRYWWA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0006 CDS 7440 8063 - phospholipid/glycerol acyltransferase YP_001185513.1 146305048 5106681 PFAM: phospholipid/glycerol acyltransferase Cytoplasmic Membrane[Class 3] TIGR00530|AGP_acyltrn|1-acylglycerol-3-phosphate O-acyltransferases|subfamily_domain|2.4e-08|2.3.1.51|Fatty acid and phospholipid metabolism|Biosynthesis PF01553|Acyltransferase, Acyltransferase|35|153|7e-17 COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ATGCTCGCCGCATTGACCGCTTTCGCCATCACCTCGGCAGCTCGCCTGCTGACCGGTGCCCGCGCCCTGTGGCTCGGCAGCACCGCGCAGGCGACGCAGCGCCTGTACTACGCCAATCACAGCAGCCATGGCGACTTCGTCCTGCTCTGGGCGTCGCTGCCGCCGGAGTTGCGCAAGCGCACCCGGCCAGTGGCCGGCGCCGACTACTGGCAGAAGCCGGGCGTGCGCAGCTTCCTGATCAATAACGTGTTCAACGGTGTGCTGGTCGACCGCGAACGCAAGGAGGCAGGCGTCAACCCGCTACAGGCGATGCTCGATGCGCTGGACGGCGGCGACTCGCTGATCATCTTCCCCGAAGGCACGCGCAACCTCGGCGACGAGCCGCTGTTGCCGTTCAAGAGCGGCCTCTATCACCTGGCCCAGGCACGTCCGGAAGTGGAGCTGGTGCCAGTGTGGATCGCCAACCTGAATCGGGTGATGCCCAAGGGCCGCGCACTACCGCTGCCCCTGCTATGCACCCTGAGCTTCGGCGCTGCGCTGGAGCGTATCGAGGGGGAGGGCAAGGAGGCCTTCCTGGAACGCGCACGTAACGCCCTGCTGGCACTGGCACCCGAGGAGGCCTGA MLAALTAFAITSAARLLTGARALWLGSTAQATQRLYYANHSSHGDFVLLWASLPPELRKRTRPVAGADYWQKPGVRSFLINNVFNGVLVDRERKEAGVNPLQAMLDALDGGDSLIIFPEGTRNLGDEPLLPFKSGLYHLAQARPEVELVPVWIANLNRVMPKGRALPLPLLCTLSFGAALERIEGEGKEAFLERARNALLALAPEEA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0007 CDS 8073 8507 - hypothetical protein YP_001185514.1 146305049 5106682 Cytoplasmic Membrane[Class 3] ATGCAGGCTGATCTGCTGCTGGTCGCCGCGCTGCTACGACGCGGGCGCAGCCTCGACCATTTTTCCAGCGCGCTGAGTTTGGTTGCCGTGATCTTCGGCCTGGCGCCATGGCTGGGTGCACCGCCAAGCCTGATGCTGGCGCTGCTCTGCGCAGCGCTGCTGATCCTCGGCCTGGCCGAGAAGTACTGGGCGCTGCGCGTGGCGCTGGATGCCGAACTGTTCCAGCGTCTGGCGGAGGCGGGCGAACAGCTCGACGGCCAGACTCATGCGCTGGATCAGGCGCGGCAGAAGCTGGGGCTGCAGAATGCGCAGCTGGCTGGCCGCGACTGGAGCCTGCGCGCTCAGGGTGCGCTCGGCCTGCTACGTAAACAGGCGCTGTGCCTGCTGCTACAGAGCGTCATCGTCGTACTCGGATTCTTCATCGTCTTCGCTTAA MQADLLLVAALLRRGRSLDHFSSALSLVAVIFGLAPWLGAPPSLMLALLCAALLILGLAEKYWALRVALDAELFQRLAEAGEQLDGQTHALDQARQKLGLQNAQLAGRDWSLRAQGALGLLRKQALCLLLQSVIVVLGFFIVFA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0008 CDS 8497 9834 - dual specificity protein phosphatase YP_001185515.1 146305050 5106683 PFAM: phosphoesterase, PA-phosphatase related ; PFAM: phosphoesterase, PA-phosphatase related; Dual specificity protein phosphatase Cytoplasmic Membrane[Class 3] PF00782|DSPc, Dual specificity phosphatase, catalytic domain|304|430|1e-09 COG2453|CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]. ATGGACAACACGCGCGAACAGGGATTGTGGAAGCGCGGCGTACTCTGGCTGCTGTTGCTCGGCCCGCTGTTCTTCGCCAGCTACGGCTTCGCCAACTGGCTGACCGGGCAGCGCGATGATGTCGGCAGCCTGGTCTTCGCCTGGGAACCACAGATCCCGCTGTGGCCCTGGACCATCGTGCCGTACTGGTCGATCGACCTGCTCTATGGCCTGTCCTTCCTGTTGCCGGCCTGCCGCCGCGAGATGGATCGCCACGCCCTGCGCCTGCTCGCCGCGCAGGTGATCTGCGTCGCCTGCTTCCTGCTCTGGCCGCTGCGCTTCACCTTCGAGCGGCCGCCGCTGGACGGCGCCTTCGGCCTGATGTTCGACGTGCTGATGGGCTTCGACAAACCCTTCAACCAGGCGCCGTCGCTGCATATCACCCTGCTGGTAATCATCTGGGCGATGTTCGCCAATCACACCCGCGGCCCGTTCTGGCGTGGCCTGCTGCACGGGTGGATGGCGCTGATCGGCATCTCCGTGCTGACCACCTGGCAGCATCACTTCATCGACCTGCCCACCGGGGCGCTGGCGGGCTTCTTCTGCCTGTGGCTGCTGCCGCTGCAGGGCGCTACGCCGCTTACGCAGATGCGCCTCACCAGCGATCCACGGCGTTGGCGCCTGGCGCTGCGCTATGGGCTTGGCGCAACGCTGAGCGCCGTGCTGGCCGTCAAGCTGGGCGGTGCCTGGCTATGGCTGTTCTGGCCAACCGTTGCCCTGGCCATGGTCGCGCTCAACTACCTGTTGTTCGACGCTGCCGGCTTCCAGAAGCAAGCCAACGGCCGCCTCAGCCCGGCCGCGACAGCGTTGCTCGCGCCCTATCTGCTCGGTGCCTGGATCAACTCGCGGCTATGGACCTATCGCCAGCCAATGCCGAGTCAGGTGGTGGAGGGCATCCATCTTGGCCGCCTGCCCGCCACGGGCGAACTCGGTAGCTATGCCGCCATGGTCGACCTGTGCGCCGAACTGCCGCTGCTGCGCACACCTAGCGCCTACTGCAGTCTGCCGTCACTGGACCTGGTGACGCCGGATGCGCTGACCTGCCAACGCGCCGCCGAGGCCATCGAACGTCTGCGCCACGAGGGCCCGCTGCTGGTGTGCTGCGCCCTGGGCTATTCGCGCAGTGCCACAGCCGTGGCCGCCTGGCTGCTGCACAGCGGCCGCTGCCAGAGCGTGGATGCGGCCGTGGCGCTGATCCGCCAGGCGCGGCCACAGGTCGTGCTTGGCCCGCAGCACCTGGCCGCACTGCAGGGCATGCTCGTTGCCAGCCCGGCCCTGGAGGTCGCACATGCAGGCTGA MDNTREQGLWKRGVLWLLLLGPLFFASYGFANWLTGQRDDVGSLVFAWEPQIPLWPWTIVPYWSIDLLYGLSFLLPACRREMDRHALRLLAAQVICVACFLLWPLRFTFERPPLDGAFGLMFDVLMGFDKPFNQAPSLHITLLVIIWAMFANHTRGPFWRGLLHGWMALIGISVLTTWQHHFIDLPTGALAGFFCLWLLPLQGATPLTQMRLTSDPRRWRLALRYGLGATLSAVLAVKLGGAWLWLFWPTVALAMVALNYLLFDAAGFQKQANGRLSPAATALLAPYLLGAWINSRLWTYRQPMPSQVVEGIHLGRLPATGELGSYAAMVDLCAELPLLRTPSAYCSLPSLDLVTPDALTCQRAAEAIERLRHEGPLLVCCALGYSRSATAVAAWLLHSGRCQSVDAAVALIRQARPQVVLGPQHLAALQGMLVASPALEVAHAG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0009 CDS 9834 11588 - alpha/beta hydrolase fold YP_001185516.1 146305051 5106684 PFAM: alpha/beta hydrolase fold Cytoplasmic[Class 3] PF00561|Abhydrolase_1, alpha/beta hydrolase fold|60|266|2e-07 COG2267|PldB, Lysophospholipase [Lipid metabolism]. ATGCGCCCCGTACAACTGCATACCTTCACCACCCATGACGGCGTCGAACTGAGCTATTGCCACTGGCCGGCAACCGTGCCGGCGGACGGCTCACGTCAGGCCGTGGTGCTGTTTCATCGTGGCCACGAGCACGGCGGGCGCATGGCTCACCTAGTGGACGAGCTGGAGCTGCCGCACTGCGATTTCTTCGCCTGGGACGCCCGCGGCCATGGCCTGTCGCCCGGTGCGCGCGGCGACAGCCCGAGCTTCGCCACCAGCGTGCGCGACGTGCAGACCTTTATCGAGCATATCGGCAGCGCACACGGCATCGCCGAAGAGGACCTGTCGGTGGTGGCGCAAAGCGTCGGCGCGGTGATCGTCTCCACCTGGGCCCATGACTACGCGCCGAAGGTGCGCTGCCTGGTGCTCGCCTCGCCGGCGTTCAAGGTCAAACTCTACGTGCCCTTCGCCCGGCCCGGGCTGAAGCTGCTGCACGCCTGGCGCGGCAACTTCTTCGTCAACAGCTACGTGAAGGCGAGGTTCCTCAGCCACGATCCCGAGCGCATCGCCTCCTTCGAGAACGACTCGCTGATCGCCCGGCCGATCTCGGTGACCATGCTGCTCGGCCTGTACGAGGCCGCCGAGCGCGTCGTCGCCGACGCCCAGGCGATCCAGGTGCCGACCCAGCTGCTGATCTCCGGCGCCGACTTCGTCGTCCACCGCAAACCGCAGGAGGACTTCTTCGAGCGTCTCGGCAGCCTGCGCAAGGAAAAACACCTGCTGCCCGGCTTCTTCCACGACACCCTTGGCGAGCGCGACCGCGCCCATGCCCTGAGCCGCGCGCGGCGCTTTATCCTGCGCAACTTCGAGGAGCCGGTGACGCGCCCCTCGCTGCTCGATGCCGATCGCCTGGGCGCCACCTGCGCCGAAGCCGAAGCGCTGGCCGCGCCGCTGCCAAGGAACTCGCTGCGCGACCTCTACTGGCGTGCCACCCGTGCCGGCATGCGCCTGGGCAGTACGCTGTCGGCCGGAGTGAAGCTGGGCTTCGACACCGGCTTCGATTCTGGCAGCACCCTCGATTACGTCTACCGCAACCAGCCCACCGGCAAGGGCGCGCTGGGCCGCCTGATCGATGCGAACTACCTGGATTCCATCGGCTGGCGCGGCATCCGCCAGCGCAAGCTGCACGCCGAGGAACTGCTGCGCCTGGCCATGACCAGGCTGCGTGAGACGGGCAGGGCGGTGCGCATCGTCGATATCGCCGCCGGCCACGGCCGCTACATCCTCGAATCGCTGGAAGGCCAGCAGCAGCGCCCAGATTCGATCCTGCTGCGCGACTACAGCGACATCAACGTGCGTGACGGCAATGCCCTGATCGAGCAGAAGGGCCTGGCCGACATCGCCCGCTTCGTCAAAGGCGATGCCTTCGACCGTGAGGATCTCGCTGCGCTGGAGCCGAAACCGACCCTGGCAGTGGTCTCCGGCCTGTACGAGCTGTTCGGCAGCAACCAGATGGTCGGCGACTCGCTGGCCGGGCTGGCGGCGGCGGTGGAGGAGGGTGGTTATCTGGTCTACACCGGCCAGCCCTGGCACCCGCAGCTGGAGCTGATCGCCCGCGCCCTGACCAGCCACCGCGACGGCCAGGCCTGGGTCATGCGCCGGCGCAGCCAGGCGGAGATGGATCAGCTGGTGGAAGCGGCGGGCTTTCGCAAGGTGGCGCAGCGCATCGACCAGTGGGGCATCTTCAGCGTATCCCTGGCGCAGCGGGTGAAGTGA MRPVQLHTFTTHDGVELSYCHWPATVPADGSRQAVVLFHRGHEHGGRMAHLVDELELPHCDFFAWDARGHGLSPGARGDSPSFATSVRDVQTFIEHIGSAHGIAEEDLSVVAQSVGAVIVSTWAHDYAPKVRCLVLASPAFKVKLYVPFARPGLKLLHAWRGNFFVNSYVKARFLSHDPERIASFENDSLIARPISVTMLLGLYEAAERVVADAQAIQVPTQLLISGADFVVHRKPQEDFFERLGSLRKEKHLLPGFFHDTLGERDRAHALSRARRFILRNFEEPVTRPSLLDADRLGATCAEAEALAAPLPRNSLRDLYWRATRAGMRLGSTLSAGVKLGFDTGFDSGSTLDYVYRNQPTGKGALGRLIDANYLDSIGWRGIRQRKLHAEELLRLAMTRLRETGRAVRIVDIAAGHGRYILESLEGQQQRPDSILLRDYSDINVRDGNALIEQKGLADIARFVKGDAFDREDLAALEPKPTLAVVSGLYELFGSNQMVGDSLAGLAAAVEEGGYLVYTGQPWHPQLELIARALTSHRDGQAWVMRRRSQAEMDQLVEAAGFRKVAQRIDQWGIFSVSLAQRVK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0010 CDS 11614 12219 - CDP-alcohol phosphatidyltransferase YP_001185517.1 146305052 5106685 PFAM: CDP-alcohol phosphatidyltransferase Glycerophospholipid metabolism [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic Membrane[Class 3] PF01066|CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase|64|187|2e-06 COG0558|PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]. ATGCCTTCGATCTACCAGCTCAAACCCGCCTTCCAGAACCTGCTGCGCCCCGGCGTCGAACGTCTTTACGCGCGCGGCGTCACCGCCAACCAGGTGACCCTGGCCGCCGCCCTCATCTCCGTGCTGCTCGGCGTTCTACTCGCAGCCTTCAGCCATGTCGTCTGGCTGTTCGCCTTGATCCCCCTGTGGATGCTGCTGCGCATGGCGCTCAATGCCGTCGACGGCATGCTCGCGCGCGAGTTCGGCCAGCAGTCGAAGCTCGGCGCCTACCTCAACGAGCTGTGCGACGTAGTTGCCGACAGTGCGCTGTATCTGCCTTTCGCCCTGCTGCCCGGCGTCTCGCCGCTACTGGTGGTGACCGTGGTGCTACTGGCGGTGATCAGCGAGTACGCCGGCGTGCTCGGGCCCATGATCGGCGCCTCCCGCCGCTATGACGGGCCCATGGGCAAGAGCGACCGCGCCTTCTGCTTCGGCGTGCTCGGTGCCGGCGTCGCCACGGGCCTGCTGCCTGCCTTGTGGATCAACCTGCTGCTGGCGCTGATCCTGGTCTTGCTGCTCTACACGCTCTACAACCGCGTTCGCCAGGGGTTGGCCGAAGCGGCCTGA MPSIYQLKPAFQNLLRPGVERLYARGVTANQVTLAAALISVLLGVLLAAFSHVVWLFALIPLWMLLRMALNAVDGMLAREFGQQSKLGAYLNELCDVVADSALYLPFALLPGVSPLLVVTVVLLAVISEYAGVLGPMIGASRRYDGPMGKSDRAFCFGVLGAGVATGLLPALWINLLLALILVLLLYTLYNRVRQGLAEAA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0011 CDS 12430 13197 - phospholipid/glycerol acyltransferase YP_001185518.1 146305053 5106686 PFAM: phospholipid/glycerol acyltransferase Cytoplasmic Membrane[Class 3] TIGR00530|AGP_acyltrn|1-acylglycerol-3-phosphate O-acyltransferases|subfamily_domain|4.5e-26|2.3.1.51|Fatty acid and phospholipid metabolism|Biosynthesis PF01553|Acyltransferase, Acyltransferase|64|186|5e-25 COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ATGGCGATATTGCAGGCTCTCAGAATCACGCTTTTCTACCTGCTGCTGTCGTCCAGTTCGTTCTTCTGGTGCCTGATCAGCCTGGTGGTCGCGCCCTTTTTGCCGTTCCGCCAACGCTACCGTTTCGTCGTTCAGGCCTGGTGCAGCTGCGCCGTGTGGCTGGCGAGAGTGATCGTCGGCATTCGCTACGAAGTGCGCGGCCTGGAGAACATCCCCGAACGTCCCTGCGTGATCCTCGCCAACCACCAGAGCACCTGGGAAACCTTCTTTCTTTCCTCCTACTTCGAACCCCTCAGCCAGGTGGTCAAGCGCGAACTGCTGCGCGTGCCGTTCTTCGGCTGGGGCATGGCGCTGCTCAAGCCCATCGCCATCGACCGCAGCAACCCCAAGGCGGCGCTCAAGCAACTGGCCAAGCAGGGCGAAGAGCGCCTCAAACAGGGCGCCTGGGTGCTGGTGTTCCCCGAAGGCACGCGCATTCCTCCTGGACAGATCGGCAAGTTCTCCCGCGGCGGTACGTCCCTGGCGGTGAATGCCGGCCTGCCGGTACTGCCCATCGCGCACAATGCCGGTGAATTCTGGCCCAAGGCAGGCTGGGGCAAACGCCCGGGTACCATCCAGGTGATCATCGGCCAGCCAATGTACGCCGAGGGTGAAGGCCCGCGCGCCATCGCCGAACTCAACGAGCGCGCCTTCCAGTGGGTGTGCCGACAGCAGACCGAACTGCGTGGCGAGGAGCCGCAGCTCAGCCGTCTGAGCGAGCCGGTCTGA MAILQALRITLFYLLLSSSSFFWCLISLVVAPFLPFRQRYRFVVQAWCSCAVWLARVIVGIRYEVRGLENIPERPCVILANHQSTWETFFLSSYFEPLSQVVKRELLRVPFFGWGMALLKPIAIDRSNPKAALKQLAKQGEERLKQGAWVLVFPEGTRIPPGQIGKFSRGGTSLAVNAGLPVLPIAHNAGEFWPKAGWGKRPGTIQVIIGQPMYAEGEGPRAIAELNERAFQWVCRQQTELRGEEPQLSRLSEPV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0012 CDS 13211 13741 - D,D-heptose 1,7-bisphosphate phosphatase YP_001185519.1 146305054 5106687 TIGRFAM: histidinol-phosphate phosphatase family protein ; Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate Lipopolysaccharide biosynthesis [KEGG] ; Metabolic pathways [KEGG] 3.1.3.- Cytoplasmic[Class 3] TIGR01656|Histidinol-ppas|histidinol-phosphate phosphatase family domain|subfamily_domain|1.3e-49||No Data|No Data PF00702|Hydrolase, haloacid dehalogenase-like hydrolase|5|147|2e-05 COG0241|HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ATGAAACTGCTGATCCTCGACCGCGACGGTGTCATCAATGAAGACTCCGACGCCTACATCAAGACGCTCGACGAGTGGATTCCGATTGCCTCGTCGATCACCGCCATCGCGCGCCTGTCGCAAGCGGGCTGGACGGTGGCCGTGGCCACCAACCAGTCCGGCATCGCCCGTGGCTATTACGACCTGGCGACCCTGGAGTCGATGCACGCGCGCCTGCGCGAGCTGGTGGGCGAGCAGGGCGGCGAAGTCGGGCTGATCGTCTACTGCCCGCACGGGCCGGACGATGGCTGCGAGTGCCGCAAGCCCAAGGCGGGCATGCTCAGGCAGATTGCCGCGCACTACGGCACGGATCTGGCAGGAATCTGGTTCGTCGGCGACAGCAGCGGTGACCTGCAGGCCGCACTGGCCGTCGATTGTCAGCCCGTTCTGGTAAAGACTGGCAAGGGCGAACGTACCCTGGCCAAGCCGTTACCGCCGGGAACTCTGGTATTCGATGATCTGGCGGCGGTCGCCGATCAACTGCTCTCATAA MKLLILDRDGVINEDSDAYIKTLDEWIPIASSITAIARLSQAGWTVAVATNQSGIARGYYDLATLESMHARLRELVGEQGGEVGLIVYCPHGPDDGCECRKPKAGMLRQIAAHYGTDLAGIWFVGDSSGDLQAALAVDCQPVLVKTGKGERTLAKPLPPGTLVFDDLAAVADQLLS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0013 CDS 13811 15865 - glyS glycyl-tRNA synthetase subunit beta YP_001185520.1 146305055 5106688 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA Aminoacyl-tRNA biosynthesis [KEGG] 6.1.1.14 Cytoplasmic[Class 3] biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA TIGR00211|glyS|glycyl-tRNA synthetase, beta subunit|equivalog_domain|1.2e-230|6.1.1.14|Protein synthesis|tRNA aminoacylation PF05746|DALR_1, DALR anticodon binding domain|577|671|7e-06 ; PF02092|tRNA_synt_2f, Glycyl-tRNA synthetase beta subunit|6|550|0.0 COG0751|GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ATGAGTGCGAAAGATTTCCTGGTCGAACTGGGCACCGAAGAGCTGCCACCGAAAGCCCTGAAAAGCCTCGGTGATGCCTTCCTCGCCGGTATCGAGAAAGGCCTCAAGGCCGCCGGCCTGAACTACGCCGCCAGCCGCGTATATGCGGCGCCGCGGCGCCTGGCGGTGCTGGTGGAGCAGCTGGAAGAGCAGCAGGCCGACCGCAGCATGAACCTCGACGGTCCGCCCATCCAGGCCGCCTTCGATGCCGACGGCAACCCGACCCAGGCCGCCCTGGGCTTTGCCCGCAAATGCGGCGTGGACATCGCCGAGATCGACCGCAGCGGCGCGAAACTGCGTTTCGCCCAGCACATCCCCGGCCAGCCGGCGGTGAACCTGCTGCCGACCATCGTGCAGGACTCGCTGAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGCCGCCCGTCGCGACGAGTTCGTGCGTCCGACCCAGTGGCTGGTGATGCTGTTCGGCGACGCCGTGGTCGACTGCGAGATCCTCGCGCAGAAGGCCGGTCGCGTGTCCCGTGGCCATCGCTTCCACGCCAACCGCGAAGTGCGCATCAGCAGCCCGGCGAACTACGCCGAAGACCTGCGCAGCGCCTATGTGCTGGCCGACTTCGCCGAGCGCCGCGAGATCATCAGCCGCCGCGTCGACGAGCTGGCCGCCGCCGAGCAGGGCACGGCCATCGTACCCCCGGCGCTGCTGGACGAAGTGACCGCCCTGGTGGAATGGCCGGTGCCGCTGGTCTGCTCCTTCGAGGAGCGCTTCCTCGAGGTGCCGCAGGAGGCGCTGATCAGCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTCGATGCGGGCGGCAAGCTGCTGCCGCGCTTTATCACCGTGGCGAACATCGAAAGCAAGGACCCGGCGCAGATCGTCTCGGGCAACGAGAAAGTCGTGCGTCCGCGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGAAGCAGAAGCTCGAAGGCTTCAACCAGCGCCTGGCCAACGTGGTGTTCCAGGCCCAGCTCGGCTCGGTGTTCGACAAGGCCCAGCGGGTATCGGCGCTGGCCGGTTTCATCGCCCGCGAAGTCGGCGGCGACGAGGCCCGCGCCGCCCGTGCCGGCCTGCTGTCCAAGTGCGACCTGGCCACCGAGATGGTCGGCGAATTCCCCGAGATGCAGGGCATCGCCGGCTACTACTACGCGCTCAACGACGGTGAGCCGCAGGACGTCGCCCTGGCCCTGAACGAGCAGTACATGCCGCGCGGTGCCGGCGCCGAATTGCCGAGCACCCTGACCGGTGCCGCCGTGGCCGTGGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCGACCGGCTCGAAGGACCCCTACGCCCTGCGTCGCGCCGCCCTCGGCGTGCTGCGCATCCTGATCGAGAAGGGCCTGGATCTGGACCTGGCCGCCGCGGTCGACTTCGCCGTCGCCCAGTACGCCGGCAAGGTCAAGAGCGACGGCCTGGCCGCCCAGGTGCTGGAGTTCATCTTCGACCGCCTGCGTGCACGCTACGAAGACGAAGGTATCGAAGTGGCCGTGTACCAGGCCGTGCGCGCGGTCAATCCGACCTCGCCGCTGGACTTCGACCAGCGCGTGCAGGCCGTGCAGGCCTTCCGCAAGCTGCCGCAGGCCGAGGCCCTGGCCGCTGCCAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGTGGCGTCGCCGCCCAGGTCGAGGCGCACTACTTCGACAACCCCAGCGAGTTCGCCCTGCACGCCGCCATCCAGCAGGCAGACCAGGCCGTACAGCCGCTGGCCGCCGCCCGCCAGTACAACGAGGCCCTGGCCAAGCTGGCCAGCCTGCGCGAGCCGGTGGACGCCTTCTTCGAGGCGGTGCTGGTCAACGCCGAGGATGCGCGCGTGCGCGCCAACCGTTACGCCCTGCTGGCCCGTCTGCGCGGGCTGTTCCTCGGCGTGGCGGACATCTCGGTACTGGGCTGA MSAKDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLNYAASRVYAAPRRLAVLVEQLEEQQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVDIAEIDRSGAKLRFAQHIPGQPAVNLLPTIVQDSLNDLPIPKRMRWAARRDEFVRPTQWLVMLFGDAVVDCEILAQKAGRVSRGHRFHANREVRISSPANYAEDLRSAYVLADFAERREIISRRVDELAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLDAGGKLLPRFITVANIESKDPAQIVSGNEKVVRPRLTDAEFFFKQDKKQKLEGFNQRLANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDEARAARAGLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDFAVAQYAGKVKSDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQAVQAFRKLPQAEALAAANKRVSNLLSKAEGGVAAQVEAHYFDNPSEFALHAAIQQADQAVQPLAAARQYNEALAKLASLREPVDAFFEAVLVNAEDARVRANRYALLARLRGLFLGVADISVLG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0014 CDS 15862 16809 - glyQ glycyl-tRNA synthetase subunit alpha YP_001185521.1 146305056 5106689 PFAM: glycyl-tRNA synthetase, alpha subunit ; glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA Aminoacyl-tRNA biosynthesis [KEGG] 6.1.1.14 Cytoplasmic[Class 3] biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA TIGR00388|glyQ|glycyl-tRNA synthetase, alpha subunit|equivalog_domain|2e-168|6.1.1.14|Protein synthesis|tRNA aminoacylation PF02091|tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit|11|298|1e-161 COG0752|GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. GTGAGCCAGAACAAGCCTGCCGTGCGCACCTTCCAGGACCTGATCCTGGCCCTGCAGAACTACTGGGCCGAGCAGGGCTGCGTGGTGCTGCAACCCTACGACATGGAAGTGGGCGCCGGCACCTTCCACACCGCCACCTTCCTGCGCGCCGTCGGCCCCGAGACCTGGAACGCCGCCTACGTGCAGCCGTCCCGTCGCCCGACCGACGGCCGCTACGGCGAAAACCCCAACCGCCTGCAGCACTATTACCAGTTCCAGGTGGTCTTGAAGCCCAACCCGGAGAACTTCCAGGAGCTGTACCTGGGTTCGCTCAAGGCCATCGGCCTCGACCCGGAAGTGCACGACATCCGCTTCGTCGAGGACAACTGGGAATCGCCCACACTCGGCGCCTGGGGCCTGGGCTGGGAAATCTGGCTCAACGGCATGGAAGTCACCCAGTTCACCTACTTCCAGCAGGTCGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTATGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTCGACTCGGTCTACGACCTGATCTGGACCGACGGCCCGTTCGGCACCGTGACTTACGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCCACCTACAACTTCGAGCACGCCAACGTCGAGAAGCTGTTCGAGCTGTTCGACTTCTACGAGAGCGAAGCCAACCGCCTGATCGAGCTGGAGCTGCCGCTGCCGACCTACGAGATGGTGCTCAAGGCCTCGCACACCTTCAATCTGCTCGACGCCCGTCGCGCCATTTCGGTGACCGCGCGCCAGCAGTACATCCTGCGCGTGCGCACCCTGGCCCGTGCGGTAGCGCAGAGCTACCTGCAGGCGCGCGCCAAGCTCGGCTTCCCCATGGCCACCCCCGAACTGCGTGACGAAGTACTGGCCAAGCTGGAGGCGCAAGCATGA MSQNKPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLGSLKAIGLDPEVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYLQGVDSVYDLIWTDGPFGTVTYGDVFHQNEVEQSTYNFEHANVEKLFELFDFYESEANRLIELELPLPTYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARAVAQSYLQARAKLGFPMATPELRDEVLAKLEAQA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0015 CDS 17057 17623 + DNA-3-methyladenine glycosylase I YP_001185522.1 146305057 5106690 TIGRFAM: DNA-3-methyladenine glycosylase IPFAM: methyladenine glycosylase ; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase Base excision repair [KEGG] 3.2.2.20 Unknown[Class 3] biological_process|GO:0006281|DNA repair|IEA ; molecular_function|GO:0008725|DNA-3-methyladenine glycosylase I activity|IEA TIGR00624|tag|DNA-3-methyladenine glycosylase I|subfamily|6.6e-119|3.2.2.20|DNA metabolism|DNA replication, recombination, and repair PF03352|Adenine_glyco, Methyladenine glycosylase|6|180|2e-88 COG2818|Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ATGCCCCGCTGCTTCTGGTGTACCGACGATCCGCTGTATCAGGCCTACCACGACGAGGAATGGGGCGTGCCGCAGCGCGATGCGCGCCAGCTGTTCGAGATGCTGCTGCTCGAAGGCGCCCAGGCCGGGCTGTCGTGGATCACCGTGCTGAAGAAGCGCGAGCGCTACCGCCAGGTGCTGCATGGCTTCGACCCCGAACGCCTGGCGCGTTTGAGCGACGAGGAAATCGAGGCGCTGATGCAGGAGCCTGGCATCATCCGCAACCGCCTCAAGCTCAAGGCCGTGCGGCAGAACGCCCAGGCCTGGCTGAAGCTGGAGGATCCGGTGAGCTGGCTCTGGTCCTTCGTCGGCGGCGCGCCGAAGATCAACCATTTCAGCGACCGCAGCCAGATGCTGGCAGTGACGCCCGAGGCCGAGGCGATGAGCAAGGCGTTGCGCAAGGCCGGCTTCAACTTCGTCGGGCCGACCATCTGCTATGCCTTCATGCAGGCCACGGGCATGGTGATGGACCACACCACCGACTGCGACCGTTACCCCGAATTGAGCGGTTCGGCGGCGACTGCCTGA MPRCFWCTDDPLYQAYHDEEWGVPQRDARQLFEMLLLEGAQAGLSWITVLKKRERYRQVLHGFDPERLARLSDEEIEALMQEPGIIRNRLKLKAVRQNAQAWLKLEDPVSWLWSFVGGAPKINHFSDRSQMLAVTPEAEAMSKALRKAGFNFVGPTICYAFMQATGMVMDHTTDCDRYPELSGSAATA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0016 CDS 17717 18604 + lipid A biosynthesis lauroyl acyltransferase YP_001185523.2 146305058 5106691 PFAM: lipid A biosynthesis acyltransferase ; Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA Lipopolysaccharide biosynthesis [KEGG] ; Metabolic pathways [KEGG] No localization assigned and computational localization prediction using PSORTB not performed[Class 3] biological_process|GO:0009245|lipid A biosynthetic process|IEA ; molecular_function|GO:0008415|acyltransferase activity|IEA TIGR02207|lipid_A_htrB|lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase|subfamily|3.3e-16|2.3.1.-|Cell envelope|Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides PF03279|Lip_A_acyltrans, Bacterial lipid A biosynthesis acyltransferase|8|286|2e-37 COG1560|HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. GTGGAAGCATTCAAAGGCCGGCTGGTGGTCGGCTTTCTCCGTCTGTTCGCCCTGCTGCCCTGGCGCGCCGTGCAAGCGGTGGGCAATGCCATCGGCTGGCTGATGTGGAAATTGCCCAACGGCTCGCGCGACGTGGTGCGCATCAACCTGAGCAAGTGCTTTCCCGAGCTGAACCAGGCCGAACTGGATCGTCTGGTCGGGCAGAGCCTCAAGGACATCGGCAAGACCCTGACCGAAAGCGCCTGCGCCTGGATCTGGCCGGCGCAGAAATCGCTCAAGCTGATCCGCGAAGTGGAAGGCCTGGAGGTGCTGCAGCAGGCGCTGGCCTCGGGCAAGGGCGTGGTGGGCATCACCAGCCACCTGGGCAACTGGGAAGTGCTCAACCACTTCTACTGCAACCAGTGCAAACCGATCATTTTCTACCGCCCGCCCAAGCTCAAGGCCGTCGACGAGCTGCTGCAGCAGCAGCGCGTGCAGATGGGCAACCGCGTGGCGCCCTCGACCAAGGAAGGCATCCTCAGCGTCATCAAGGAAGTGCGCAAGGGCGGCGCCGTGGGCATTCCGGCCGATCCGGAGCCGAGCCGTTCCGCCGGCGTTTTCGTGCCCTTTCTCGGCACCACTGCGCTGACCAGCAAGTTCGTCCCGGGCATGCTCACCGGCGGCAAGGCGGTGGGTGTATTCCTGCATGCGCTGCGTCTGCCCGATGGCAGCGGCTACAAGGTGATCCTCGAGGCGGCGCCCGAAGGCATGTACAGCGAGAACGTGGAAGAAGGCGTGGCGGCGATGAGCGAAGTGGTGTCGCGCTACGTACGCAACTACCCGAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGTCCGGACGGCGAGGCCAAGTGGTACTGA MEAFKGRLVVGFLRLFALLPWRAVQAVGNAIGWLMWKLPNGSRDVVRINLSKCFPELNQAELDRLVGQSLKDIGKTLTESACAWIWPAQKSLKLIREVEGLEVLQQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDELLQQQRVQMGNRVAPSTKEGILSVIKEVRKGGAVGIPADPEPSRSAGVFVPFLGTTALTSKFVPGMLTGGKAVGVFLHALRLPDGSGYKVILEAAPEGMYSENVEEGVAAMSEVVSRYVRNYPSQYMWSMKRFKKRPDGEAKWY Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0017 CDS 18721 18987 + type IV pilus assembly PilZ YP_001185524.1 146305059 5106692 PFAM: type IV pilus assembly PilZ Unknown[Class 3] PF07238|PilZ, PilZ domain|3|88|6e-06 ATGTCGAACCAGCGTCACCAGGTACGAACCCCGATGAAGTGCCGGATCAAGATCAGCCACCCGAGTTTCGGCGAGCTGGTGGCACAGACCCGCGACCTGTCCGATAGCGGTGTCTATGTGAAGCACCCCGACATGACGAGCCTGACCGTCGGTGCCGAAGTGACCGGCCAGGTGCAGGACCTGCCGTTCCCCGCTCCGGTGTTGAAGATGGAGGTGGTGCGTGTGGACTCCGAGGGGGCCGGTCTGCGCTTTCTCGACGAGGATTGA MSNQRHQVRTPMKCRIKISHPSFGELVAQTRDLSDSGVYVKHPDMTSLTVGAEVTGQVQDLPFPAPVLKMEVVRVDSEGAGLRFLDED Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0018 CDS 19365 19931 + NLP/P60 protein YP_001185525.1 146305060 5106693 PFAM: NLP/P60 protein Cytoplasmic[Class 3] TIGR02219|phage_NlpC_fam|putative phage cell wall peptidase, NlpC/P60 family|hypoth_equivalog|9.4e-05||Mobile and extrachromosomal element functions|Prophage functions PF00877|NLPC_P60, NlpC/P60 family|75|183|4e-31 COG0791|Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]. ATGCAATGCCTTGATTCGGAAGGGCTTCCGCGCAAAGGCCAATCACCAGGGTCACTGGGTTTGAATAAGTTCTTCATGTCACTTTGCCTGGCAGGCGCTCTTTTACTGGGAATCTGTACCCAAGCCTCCGCCACCTTTCGCATTCACACCATTCCTGCCACTGCGCCAGCGGCCGAACCCAAGCCAGCCAGCGAAGTGATCGACCGCGCCCTCGCTGCACTGGGTACGCCTTACCGCTGGGGCGGTAGCAGCCTGCGCCACGGCTTCGATTGCAGCGGCCTGGTGCAATACGCCTTCAAGACCCAGGAAGACCTCGAACTGCCGCGTACCTCCCGCGCGTTGTCGCGCCTGGACGCGCCGTCGGTGAAAAGCAGCGACCTGCAGCCCGGCGATTTGCTGTTCTTCCGCATCCGCAGCCGTTCGGTGGACCACGTGGCCATCTACATCGGCGAGGGTCGTTTCGTCCATGCGCCGCGTCGCGGCACCAAGGTGCGTATCGACCGCCTCAACGATGCCTACTGGCAACGTCATTTCCAACTGGCCAAGCGGGTGGTGTCGCAAGCCTGA MQCLDSEGLPRKGQSPGSLGLNKFFMSLCLAGALLLGICTQASATFRIHTIPATAPAAEPKPASEVIDRALAALGTPYRWGGSSLRHGFDCSGLVQYAFKTQEDLELPRTSRALSRLDAPSVKSSDLQPGDLLFFRIRSRSVDHVAIYIGEGRFVHAPRRGTKVRIDRLNDAYWQRHFQLAKRVVSQA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0019 CDS 20108 20545 + Tir chaperone family protein YP_001185526.1 146305061 5106694 PFAM: Tir chaperone family protein Unknown[Class 3] ATGCCCAGTGCTGCCTATTGCCGGTTGGTCGATGACCTTTGCCAGCTGGCTTTGTTGCCGAACCCGAAAGCGCTCTATGAACGAACCGCCCTGACGGTGGGCAAGGTCAACTTCAGCCTCGTCGAGCGCTCAGGCGATCCGTACAGCGAGGTGTTGATCTATACCGACCTGGGACCGTTGCCCAGCCAGCGTCGAGATGCCGTGCTGCTGCGCTTGCTGGATATCAACTTTCACCTGTTCGTCGGTGCTGGCAGTCCCAGCTGTTCCTACAACAGCGAGACCCAGCGCCTGATGCTGGGTGTCAGCCTCCTGCTGCAGGCTGCCACTGGCCAACGCTTGCTGGCACTGCTCGGGCAACTGGCCGACATGGCTCATAACTGGCGTGACGATCATTTCCTGGAGCGCCCGAGCCCACGTCATGCGCAGGTGAGGTTGTGA MPSAAYCRLVDDLCQLALLPNPKALYERTALTVGKVNFSLVERSGDPYSEVLIYTDLGPLPSQRRDAVLLRLLDINFHLFVGAGSPSCSYNSETQRLMLGVSLLLQAATGQRLLALLGQLADMAHNWRDDHFLERPSPRHAQVRL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0020 CDS 20545 22776 + hypothetical protein YP_001185527.1 146305062 5106695 Extracellular[Class 3] ATGGACAGAATCCACCAGCCCAGTTCAGCCTCAGCACATGGGGTTGGCCACAGCCCAAGCCCATCTGTCACTGGCGCGCGCCCTGCTTCACCGGTATCGCAACCCAGCGTCACGGTGGCCAGCGAGGCACCCTTGCAGGGGCGTCAGGCCGAGCGCGCGGCCAGGCCGCAGAGTGCGCTCGAACGCTACGAATCCACCTTCCCGACGCTACGCGAGTTACGCCAGAAGGCCCAGCGTGAGGCGGCCCGGCAGGCGGACACGGACAGACCGGCCTATCACCCCCTGGAGGCTGCCAAGCGGCGCATGCTGATCGAAGGTGAATTGCTGCGGGCGCACCCTTCGCTGAGCCTGCAGCAGGCGTCGGAGATTCTCAATATGGGGCATGTCGAGCAGCTGGCCTCGCCGATTCCCTATGGCGACAGCCTGGAGAAATTGGCGACCGCGCTTGACCAGTTGTTCGCCCCGGGCCTGCAGGATGAGTTGCCGTCCCTGGTGCAATTGGGCGCGATACTGGACCAGGGCCTTGGTGAGATATCGCGTCACCTGGAAGGGCAGTTGGATCTGTATCGGCAGGTACTGCAGCACACCTTGCTGGATGACACCGAGCGAGCTCAGGTGAAAGCCGGGCAGCAGGCCTTGCAGGCGATGGCAGAGCGCTGGACGGAGGATATCAAGGGCAAGGTGCTGGGCAAGGCACAGGCGCTGGCCGAAAGCCGCCTGCAAGACCAGCAAAGGGCCCAACAGCAAAGCCCGGATCAGATGGAAGTCCAGACCCGGCAGTGGCAAAACATCCGTGACTACCTCAAGAGCGCGCAGGACGCGTTCGATACGCAAGGTGAGTTCGGCACGGCCTTGCAGCATGTCCGGCTCGACAGCCAGGTAGAGGCAATGAATGCCAGTAACCAGGGCCTGTTTTCCGCGATGCGTTCGTTCATGGCCAATGGTGTTCCGCCGGGTATCGCCTCGACATTGCTTTATGTGATGGCGCGCGCCTATGTCTCACCGCAGTTGGCCGGGGCAGAATTCGTCGCTCGTGCGCTGGGCAGTGGCATGGCCATCGGTGCGGTGCATGAGACCCTGGACAACTTCGCCAAACCGGCGGCGCGTGAAGTTTTGGCCTCGCTGGGTATGACGGAGTTGCGCGAGGTCGACCCGAGCGAAGTCATCCCGGACCCACCGCGAGCGGTGATCGTCGAGGGGCGTTACCAGGAACGCGACGCCGGACAAATGGCTGAAGCCCAGGCCGAGGTCGAGCAGGCGCGCAAGGCGTTCTTGAATGCACAGCAGGACTACAAGACCGGGACGCTCAAGGGCGATGCGATCACGCTGACCAGCCTGCCCGGTGCGCAGGCGGCTCGCGAGCTCGTCAATCTGCTGTCTTCACAAAATGCCGCATCAACCGGGGCGATGGCACTGGCTGCGTTTCTGGGCAATGCCGGCATGTATGGCCTGCAGGCGATGGGACAACGGCAGAAGACGTTCAGCCATGAGGGGCATGATCTGCCGACCCACGTACCCAAGCCGGCGCCACAGGAGGCTCTGGGCCGGCGCCTGGGCAATGTGCTCAAGGATGGGCTGTCGACGATCAATCCGCTGGATGCCTCGGTCAGGCAGAAGTACGACAGCAAGGGGTGGAGCGCTGCACTGGGCATGATGGGCTACAACAGCGTCGAAGGTTCCATCAGGCAGCTGGACACCAGTACAACCGGCGGCATGGCCTCGTCCGTGATACTCACGGGGCTGCAGACCTTTCTCATGCAACAGGTGTTCTATGCCAACAAGCCTGCCGGCGACGAGGCCGAGGCGGGCGGCACCGGCCGTTTCGACAACGCGCTGAACAATATCCGTGACCCCGATCGGGAAACCTTGCCCCATGGCTCGCGTCCGGGCACGACAGAGCGCCGGATCGAAAACACCTACGACCGTCTGCGTGGAGTGATTCAAGGGCCACCGCAGGCCGCGACCGAGATCACCGAGGCCGTGACCAGCACGGTCGTGAGCGGTCTTGGGCAACTGGGGCGCCAGGTGGCCGAGCAGGCTTCACGGCAGCAGCAACGGCTTGCGTCCGAGGTCAGCACCAGGGTGTTCAATACGCTTGCAGGCGGGCTCGAGCACGTGGGGCGTCAGGTGGCGGAGCAGGCCATGAGACAGCGCGACCGGTTCAGGGCGGCGGAGCCGCCAGGCGATATCGAAATGGGTTTGCAGGCACCTCGGGATCGAGACAACGTCTGA MDRIHQPSSASAHGVGHSPSPSVTGARPASPVSQPSVTVASEAPLQGRQAERAARPQSALERYESTFPTLRELRQKAQREAARQADTDRPAYHPLEAAKRRMLIEGELLRAHPSLSLQQASEILNMGHVEQLASPIPYGDSLEKLATALDQLFAPGLQDELPSLVQLGAILDQGLGEISRHLEGQLDLYRQVLQHTLLDDTERAQVKAGQQALQAMAERWTEDIKGKVLGKAQALAESRLQDQQRAQQQSPDQMEVQTRQWQNIRDYLKSAQDAFDTQGEFGTALQHVRLDSQVEAMNASNQGLFSAMRSFMANGVPPGIASTLLYVMARAYVSPQLAGAEFVARALGSGMAIGAVHETLDNFAKPAAREVLASLGMTELREVDPSEVIPDPPRAVIVEGRYQERDAGQMAEAQAEVEQARKAFLNAQQDYKTGTLKGDAITLTSLPGAQAARELVNLLSSQNAASTGAMALAAFLGNAGMYGLQAMGQRQKTFSHEGHDLPTHVPKPAPQEALGRRLGNVLKDGLSTINPLDASVRQKYDSKGWSAALGMMGYNSVEGSIRQLDTSTTGGMASSVILTGLQTFLMQQVFYANKPAGDEAEAGGTGRFDNALNNIRDPDRETLPHGSRPGTTERRIENTYDRLRGVIQGPPQAATEITEAVTSTVVSGLGQLGRQVAEQASRQQQRLASEVSTRVFNTLAGGLEHVGRQVAEQAMRQRDRFRAAEPPGDIEMGLQAPRDRDNV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0021 CDS 22972 23322 - hypothetical protein YP_001185528.1 146305063 5106696 Unknown[Class 3] ATGAAACAGGTATCGCAGAAACTGGCGTTCTATGAGCATGTGGCTGCCGAAAGGAGCGCCGTCTGGCCGGTGGCCTCGGGCGTGACCTTTGTGAGCCGGCGAGAGCATCAGGACTGGGGCATCGCTTTACACGTGGAGAGCCTCGCCATGAGCCCCGAGCAATTGCGTAATGCCCTGGAGCGCCGCTTCGTCGAATCCGACCGTTACAGCGACTACTTCCTCTTCCTCAACGTGCAGCAGGACTTCGTGGTTTGGCACGCCAGTCCGGACGTTGAGGGTGTGGGTGACTCCCTGGACGACATCTGCCGAGAACAGCTGCAGTTGGCAGGGCTCGGCCATCTGCAGTCCTGA MKQVSQKLAFYEHVAAERSAVWPVASGVTFVSRREHQDWGIALHVESLAMSPEQLRNALERRFVESDRYSDYFLFLNVQQDFVVWHASPDVEGVGDSLDDICREQLQLAGLGHLQS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0022 CDS 23325 23528 - hypothetical protein YP_001185529.1 146305064 5106697 Unknown[Class 3] ATGACCATTCGTAGTTTGACTGTCCTTCTGGCCCTGAGCTTGTTGGCGGGCTGTGCCAGCAAGATCGGCTGCTCCGGGTACGCCTGCGAACGCCCCGACTCCACGAACCGGGCCCTGGTGATCTGGTGGCCGGAAGACATGCGCCAGGGCCTCAATGATCGCGACCCCGCGCGGGATTACACCGTCGTTCCTCTTAAGGACTGA MTIRSLTVLLALSLLAGCASKIGCSGYACERPDSTNRALVIWWPEDMRQGLNDRDPARDYTVVPLKD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0023 CDS 23528 25618 - YscC/HrcC family type III secretion outer membrane protein YP_001185530.1 146305065 5106698 TIGRFAM: type III secretion outer membrane pore, YscC/HrcC familyPFAM: type II and III secretion system protein ; TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein Bacterial secretion system [KEGG] Outer Membrane[Class 3] TIGR02516|type_III_yscC|type III secretion outer membrane pore, YscC/HrcC family|equivalog|1.1e-137||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF03958|Secretin_N, Bacterial type II/III secretion system short domain|273|315|6e-05 ; PF00263|Secretin, Bacterial type II and III secretion system protein|319|535|3e-44 COG1450|PulD, Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion]. ATGCGCAATACCCTGATATCGCTGTCGTGGTTGTTATGGCTCGTGTCCATACCGGCGCACGCCGTGCCACCCGAGAGCTGGAAACAGACCGCCTATGCCTACGATGCCCGGCAAACCGACCTGAACTCGGCGTTGGCGGACTTCGCCCGGGAGTTCGGTCTATCGCTGGACATGCCGCCCATGGATGGCATCGTCGACGGTCGTATCCGCGCCAGCAACCCGCAGGAATTTCTCGAACGACTCGGGCGTGAATACCAGTTCCAATGGTTCGTTTACAACGAAACGCTCTACATCAGCCCCACCCGCGAACAGACGTCGGCCCGCATCGAGGTCTCGCCGGATGCCGTCGATGACCTGGAAAACGCACTGACCGCCATCGGCCTGCTCGACCCGCGTTTCGGCTGGGGCACGCTACCCGAAGAAGGCCTGGTGCTGGTTCGCGGCCCGGCCCAGTACGTACAGTTCATTCGCGAATACAGCCAGAAGGTCGAAGAACCGGAGAAAGCGGAAAAACAGGACGTCATCGTCTTCACCCTGAAGTATGCCAACGCGGCTGATCGCTCCATTCGTTATCGTGATCAGGAGCTGCGTGTAGCAGGTGTGGCCAGCATCCTTCGCGAACTGCTGGAAACCCGGTCACGGGGTGAACCCATCAGCGGCGTGGGCATTTTCCAACCATCCGGTACGACCCAAGGCCTGGCGCCAACCCGCCCGATGGGGTTGCCTTACGCTGGGATGAGCGGCCTGGATGGCGGCCTCCTCGAGCAGGGACTCGACAATGTACTGGGGCTGGCTCAGTCCTCTTCGCGCAAGCGCAGTGAAAGCCGCAGCCGCTCGCAGATCCGCGTCAGCGCCGACGTGCGCAACAACGCCGTCCTGATCTATGACCTGCCAGAGCGCAAGGCCATCTATCAGGGCCTCATCCAGCAACTGGACGTGCCGCGCAACCTGATCGAGATCGATGCCGTGATTCTCGATATCGACCGTAACGAGCTGGCCGAACTGTCCAGCCGCTGGGCCTTCAACTCCGGCAGCGTCAGCGGCGGCGCCAACCTGTTCGAACCCGGTACCACGTCGACGCTGTTCATCCAGGATGCCGGTCGGTTCGCCGCGGAATTGCGTGCACTGGAGGGAACCGGGGCCGCCTCGATCATGGGCAACCCCTCGATCCTGACCCTGGAAAACCAGCCCGCGGTCATCGACTTCAGCCGCACCGAGTACCTGACGGCGCTGGCCGAGCGCGTTGCCAATATCCAACCCATCACCGCCGGCACCAGCCTGCAGGTGATCCCGAGGTCACTGAATCAGGGCAGCCGCTCCCAGGTCCAGCTGATCGTCGACATCGAAGACGGACAGATCATCGAGTCGAACATCTCCGAGGAGCAGCCGTCGGTACGCCGTGGCAATGTCAGCACCCAGGCAGTGATCGCCGAGCATGGCTCGCTGGTGATCGGCGGTTTCCACAGTCTCGAAGCCAACGACAGGATCAACAAGATTCCCTTGCTCGGCGATATCCCGGTCATCGGTAAATTGCTGTTCCAGTCACGCAATCGCGAATTCAACCGGCGTGAGCGCTTGTTCATCCTCACCCCTCGTCTGATCGGAGATCAGGTGAACCCTGCGCGCTACGTGCAACATGGCAATCCGCATAACCTGGACCGGCAACTTCGCGAGATCGACGAGCGCCGCCGGGGTACCGAACGCCCGAGTCGGGGCGACATCGAACATGCCTTCACCCAGCTGCTCGATGGCATACACCCCTCCGGGTTCGACAGCGCACCCTTGCCGCTCAGGGCAGAAACGCTCTGCAACTCGGATCACGGACTGACGCTGGATGCCGAACGCTCCCAGTGGTTCGCCCGCGATGGTTGGGGTGTAGCAGTGGTCGTGGCACGTAACGACACGGCACAACCGATACGCATCGATGAGAGCCGCTGTGGGGGACGCTGGGCCATGGGGGTCAGTGCCTGGCCACGCGCCTGGCTCCAGCCTGGCGAGGAGAGCGAAGTGTTCATTGCCCTGCGCCAGCCGCAATCGCTGCAAAAAACCGGACAAGGCCGAACTTCATTGCTGCACAGGAGCACCCCTTGA MRNTLISLSWLLWLVSIPAHAVPPESWKQTAYAYDARQTDLNSALADFAREFGLSLDMPPMDGIVDGRIRASNPQEFLERLGREYQFQWFVYNETLYISPTREQTSARIEVSPDAVDDLENALTAIGLLDPRFGWGTLPEEGLVLVRGPAQYVQFIREYSQKVEEPEKAEKQDVIVFTLKYANAADRSIRYRDQELRVAGVASILRELLETRSRGEPISGVGIFQPSGTTQGLAPTRPMGLPYAGMSGLDGGLLEQGLDNVLGLAQSSSRKRSESRSRSQIRVSADVRNNAVLIYDLPERKAIYQGLIQQLDVPRNLIEIDAVILDIDRNELAELSSRWAFNSGSVSGGANLFEPGTTSTLFIQDAGRFAAELRALEGTGAASIMGNPSILTLENQPAVIDFSRTEYLTALAERVANIQPITAGTSLQVIPRSLNQGSRSQVQLIVDIEDGQIIESNISEEQPSVRRGNVSTQAVIAEHGSLVIGGFHSLEANDRINKIPLLGDIPVIGKLLFQSRNREFNRRERLFILTPRLIGDQVNPARYVQHGNPHNLDRQLREIDERRRGTERPSRGDIEHAFTQLLDGIHPSGFDSAPLPLRAETLCNSDHGLTLDAERSQWFARDGWGVAVVVARNDTAQPIRIDESRCGGRWAMGVSAWPRAWLQPGEESEVFIALRQPQSLQKTGQGRTSLLHRSTP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0024 CDS 25620 26045 - hypothetical protein YP_001185531.1 146305066 5106699 Unknown[Class 3] ATGGAATTCAGTGAATTCTCCGACGTCATCGCCCAATGGTGCGAGGCGTCCGCACTGCCACTCGACTGCTGGATCGACGATGCCAACGCGCGCCTTGCCGAGATGGGCGGCGGCGTCAGATGCAGCCTGGAAGTGCTCAATCCCTTCGAAGCCAGCGACCAACAACGATTGCAGGCGGTGCTGAGCCAGGGCGGTGCCGGCCTGGCCTGTGCCTGCGATGGTGCATTCGCCATCGACCCCGACACCCACGCACTCGTCCTGGTGAACTGGCATCGCGCACCCTGCTCCGTGGATCAGCTGCTGGCCAGCCTGGAAAGGCTGGCCAACCAGCGGGCTGCCCTGATCAGCCTGCTCCACGTATCCATACGCGAGGCGGCGCTCATCGCACCGCAACCGTCCTTCAACGCACTGCATCCGGGAGTGTGA MEFSEFSDVIAQWCEASALPLDCWIDDANARLAEMGGGVRCSLEVLNPFEASDQQRLQAVLSQGGAGLACACDGAFAIDPDTHALVLVNWHRAPCSVDQLLASLERLANQRAALISLLHVSIREAALIAPQPSFNALHPGV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0025 CDS 26032 26256 - hypothetical protein YP_001185532.1 146305067 5106700 Unknown[Class 3] PF06266|HrpF, HrpF protein|1|74|3e-10 ATGTCAAGCCTAGAAGCCCTGCGTAACCGTCTGGACCGCGCCCAGGAAAGCGCCGTGCGAAACAAGGACGATGCCTTGCTGCAGGCAGCCGAAAGCGCCGATATCAATGACATGCACGCCTACAACGAGGCGGCGCGCAAAGCCCAGCTCGTCAGCACCGTGGTCAGTGAGGAACTGCGCGCTCAACACGGCCTGACCAAAGCGATCATCGATGGAATTCAGTGA MSSLEALRNRLDRAQESAVRNKDDALLQAAESADINDMHAYNEAARKAQLVSTVVSEELRAQHGLTKAIIDGIQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0026 CDS 26417 27004 - HrpE/YscL family type III secretion apparatus protein YP_001185533.1 146305068 5106701 TIGRFAM: type III secretion apparatus protein, HrpE/YscL familyPFAM: HrpE family protein ; TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; PFAM: HrpE family protein Bacterial secretion system [KEGG] Unknown[Class 3] biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA TIGR02499|HrpE_YscL_not|type III secretion apparatus protein, HrpE/YscL family|equivalog|5.5e-31||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF06188|HrpE, HrpE protein|1|185|8e-31 GTGCTGACTAAACGCCGCTTCACCCTTGGCTCAGCGGTACTCGAAGAACCGATTCTGCGCCGACAGCTGCTTGCAGAAAGCCTGCGCGCGGACGAGCTTCTGGCCCAAGCACGCCTGCAGGCCGAACAATTGCTGCAGCAGGCCCACGAGCAGCGCCAGCACTACCTCGATGAAGCCGTCGCCCGCTTCTGGAGCGAAGCCAACGCACTGCTTCAGGCGATACAGGAGGAACGCGCAAGTTATCAGCGCGATGCCTTGTCCGCTGTCGACTCGCTATTGAACATCGCCCTGTCGCGTTTGCTGGATGAAACGGATCTGCCGCAGCGGATCAGCGCATTGCTGCGCAACCTGGTCGTTGGCCTGCCAAGCAAGGCGGAGGCGAACCTGGCCTGTCACCCCGAAGCCGCCAGCACGGTTCGCGCCTGGCTGCAGACGATGGGCTTCGACGCGCTCTGGCAGGTGCAGGAAGACCCAGGCATGGCACCTGAATCGCTACGCCTGAGCAACACGCTGGGTACCTTTCACATCGACTGGCCGTCGTTGCGGCGCGGGCTGATACCGAGCCTGCCCGAAGCCCGGCATGCCTAA MLTKRRFTLGSAVLEEPILRRQLLAESLRADELLAQARLQAEQLLQQAHEQRQHYLDEAVARFWSEANALLQAIQEERASYQRDALSAVDSLLNIALSRLLDETDLPQRISALLRNLVVGLPSKAEANLACHPEAASTVRAWLQTMGFDALWQVQEDPGMAPESLRLSNTLGTFHIDWPSLRRGLIPSLPEARHA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0027 CDS 26994 27527 - hypothetical protein YP_001185534.1 146305069 5106702 Unknown[Class 3] ATGAGTGATGCTGCCGAGCGCTGGGTGCGCTGGTGGTGCGAGGCCTGGCACTTCGCGCATCCGGGCTGGCGGCGATCATCTCCGGTGCTGGCAGCCGCGGCAGATTGCTCCCATAGCCGTCATGCCGCGCTCGCCCAGTCTCTGGGAATCGGCGCTACGCAACCCCCGCCACCGCATGAGGGTGTCCTGCAATGGCTGGCATTGAACGAGCGCCAGCGCCAGCACGCGCTAGCCCTGGCGCAGCACATCTGTTCGGCGAAAGCCCCCTGCCAGGCCCTGCCTGCCGATGCCGACTGGTGTCGCAGCTTGGGCAAGGCATTGCGTCCCGGCTTGTGGCTGACCGCCGAAGCCACAGATCCCAGGCTGTTGCTCGGCGCCTGGGCCGGACCTGCATGCTGGGAACGCCTGCGCCTGCAGTGGGCGCCCGGTTCGCTGGAAGAACTCCCCCCGGATCTGCCAGCCAGACGCCTGGCCACCCTGTGGGCGGCGGTGCTGTGGCGAACCTCGCAGATGGAGCGCACTCGTGCTGACTAA MSDAAERWVRWWCEAWHFAHPGWRRSSPVLAAAADCSHSRHAALAQSLGIGATQPPPPHEGVLQWLALNERQRQHALALAQHICSAKAPCQALPADADWCRSLGKALRPGLWLTAEATDPRLLLGAWAGPACWERLRLQWAPGSLEELPPDLPARRLATLWAAVLWRTSQMERTRAD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0028 CDS 27524 28342 - YscJ/HrcJ family type III secretion apparatus lipoprotein YP_001185535.1 146305070 5106703 TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ familyPFAM: secretory protein YscJ/FliF family protein ; TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein Bacterial secretion system [KEGG] T3SS[Class 3] ; Unknown[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR02544|III_secr_YscJ|type III secretion apparatus lipoprotein, YscJ/HrcJ family|equivalog|5.8e-85||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01514|YscJ_FliF, Secretory protein of YscJ/FliF family|7|202|2e-60 COG4669|EscJ, Type III secretory pathway, lipoprotein EscJ [Intracellular trafficking and secretion]. GTGAAATGGACGCTCTCCATTGTCGCCCTGTGCCTGCTTCTGTTGAGCGGGTGCAGTGATCGCACCGACCTGTTCAGCGGTCTTTCCGAACTCGATGCCAATGAGGTCATTGCCTCCCTCGGTGAACACCGCATCAGCGCGCGCAAACGCGCGGAGAAGGCGGGTGTGGTGGTGACCGTCGACACCGCAGAGATCAATCGAGCGGTGCGTGTACTGGAAGCAGCCGGGTTACCACGCCGGGCTCGGACCAGCCTGGGTGAAATATTCAAGAAGGAAGGCGTGATCTCCACGCCGCTGGAAGAACGCGCCCGGTACATCTATGCGCTGTCGCAAGAACTGGAATCGACGCTCTCGCAAATCGATGGCGTCATCGTCGCCCGTGTTCACGTCGTGCTGCCCGAGCGCATTGCGCCAGGCGAACCGGTACAGCCGGCATCGGCTGCGGTCTTCATCAAGCATGCCGCCAGCCTGGAGCCCGATGCCGTGCAACGACGGATTCAGCAGATGGTGGTCAGTAGCATCCCCGGCCTGGCCAGTACGGGGGTCGAGAGCAGCGAGAAGTTCTCCATCGTCTTCGTCCCGGCCGCCGAGCTTCAGGATGCAGATACTTTGGTGCCGTTCGGGCCCTTTCTGATCGAAAGCCAGAAACTGGGATTCTGGCAGCTCATGTCCTGGCTCATCCCCCTGGGAGGCCTGCTGCTATTGGCGGTCCTGACACTGCTGGTACGCCAGGACTGGCGCTCGGTATTGCTCCGTCGAGTACGGCCACGACAGCCGGCCAGCCATAACGTCTCGACACTGCCGAGCCGCGTCGCATGA MKWTLSIVALCLLLLSGCSDRTDLFSGLSELDANEVIASLGEHRISARKRAEKAGVVVTVDTAEINRAVRVLEAAGLPRRARTSLGEIFKKEGVISTPLEERARYIYALSQELESTLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHAASLEPDAVQRRIQQMVVSSIPGLASTGVESSEKFSIVFVPAAELQDADTLVPFGPFLIESQKLGFWQLMSWLIPLGGLLLLAVLTLLVRQDWRSVLLRRVRPRQPASHNVSTLPSRVA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0029 CDS 28353 28721 - YscI/HrpB family type III secretion apparatus protein YP_001185536.1 146305071 5106704 TIGRFAM: type III secretion apparatus protein, YscI/HrpB family Unknown[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA TIGR02497|yscI_hrpB_dom|type III secretion apparatus protein, YscI/HrpB, C-terminal domain|equivalog_domain|2.9e-10||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF09525|YscI_HrpB_dom, Bacterial type III secretion system protein (yscI_hrpB_dom)|83|122|5e-08 ATGAGCATTTCCAAGATAGACGGACTGACGAGTCCCGACTTGAAGCTCGACCAGGGACTGGTCAGTGAGCCTTCTCAGGCAGATGTCGATCTCTTTTCCAGCTTGATGCGAGACAACGGCAACACGGCTGACCAGCCCAGCCACCTGGCGGCCGTTATCGCCGAGACGGTGAATGCACGGATGACGTCTGTGGATGACCTCTCGCGGCAAGCCATGCGCCACATGAAGGAGGCCGTGACCGGCAACGATGTAAGCGCCATCACGGATATGAGCCGTGCCCTCTCGCAGTACTCGCTGCAAATGGCGGTAACGACCAAGGTGGTCAGCAAGACAGGGCAGGCACTCGAAAAACTGACCAACATGCAGTAG MSISKIDGLTSPDLKLDQGLVSEPSQADVDLFSSLMRDNGNTADQPSHLAAVIAETVNARMTSVDDLSRQAMRHMKEAVTGNDVSAITDMSRALSQYSLQMAVTTKVVSKTGQALEKLTNMQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0030 CDS 28765 29664 - HrpZ family protein YP_001185537.1 146305072 5106705 PFAM: HrpZ family protein Extracellular[Class 3] PF04877|HrpZ, HrpZ|26|280|1e-28 GTGAATATGATTAGCAATATGCCGGGGTTGGTGGCCGGCAATTTCAGCAACTTCTCTATTGGCTCGCAAAGCAATAGCGAACGACCGCAGAACATGGACCAGGTGGTGGACAAACTGGCCGACATGTTGAAAGGCAGCGACCTGTCATCCTCCCCGCTGGGACAGATGGTCAAGGACAAGCTCGACGATTCGGGCGGCCTGATGGGCATCCTGAAAAAGGGCGGAATGGAGAACGCAGTCAAGGACGCCCTCAAAGACATCATCAGCGAAAAGCTCGGCGACAACTTCGGTGCCGCCCAGTCGTTCGGCCTGGGTAACGGCTCTGGCACTGGCGGTGCCGGTGGCGCTGGCGGCGGTCAGCAACCCGACCTACTGGAGCGCGTACTCAGCGGGCTGGCCAAGTCGTCCCTGGACGATCTGCTCGGCAAACAGGGTGAGGGTACGAAGTTCTCCAACAAGGACATGCCGATGTTGGAGGAAATCGCCAAGTTCATGGATGACCCGAGAAGCGGGATCAAGCCGCCCGACTCCGGCTCCTGGGCGAATGAGCTCAAGGAAGACAACTACCTGAACAAGGAAGAGACCGCCGCATTCCGAGCCGCCCTCGACCAGGTTGGCGGGGCGCTGGACCAGAAGGCATCCGGTCAGCCGTCTGGCATGCCAGGCGGGCTGGGCATGCCGGGTAACGCCGGGCAGAACATGCTCGGCGGCGAAGGCGGCCTCGGCGGCTCGGGCACGGGTAGCGCGGCGGGCAATCCTCTGCAGCAGCTGAACGACCTGATCCAGGGCCTGCAGGGTCTGGCCTCCCAACTCAGCCTGCAAAACCTCGCCAGTAGTGCAATGGATACGGCCAATGCCCTGGTCGGTGCGATGTTGCCCAACAACAGCCGCACAGCCTGA MNMISNMPGLVAGNFSNFSIGSQSNSERPQNMDQVVDKLADMLKGSDLSSSPLGQMVKDKLDDSGGLMGILKKGGMENAVKDALKDIISEKLGDNFGAAQSFGLGNGSGTGGAGGAGGGQQPDLLERVLSGLAKSSLDDLLGKQGEGTKFSNKDMPMLEEIAKFMDDPRSGIKPPDSGSWANELKEDNYLNKEETAAFRAALDQVGGALDQKASGQPSGMPGGLGMPGNAGQNMLGGEGGLGGSGTGSAAGNPLQQLNDLIQGLQGLASQLSLQNLASSAMDTANALVGAMLPNNSRTA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0031 CDS 29716 30009 - hypothetical protein YP_001185538.1 146305073 5106706 Fimbrial[Class 3] ; Extracellular[Class 3] PF09589|HrpA_pilin, HrpA pilus formation protein|2|97|7e-19 ATGGCGATGGACCCAATCAACGGCGGCATGCAGCTGTTCAACCAAGCGACCAGTTCCCTCAACATGAACAACAACATCGCTGACGCGGCAGGCGACAGCAAGTCCTCCAAGGCCATGGAAGATGCCATGGCGCGCTCCGACGCCAGCAGCGCGAGGATGATCGACCTGCAAAGCCGTCACGCCGAGAAGATGAAAGTCGAAAACACCCTGCAGGCCATGCAGTCCGCCGAGGACGATGCTGCCAACAAGAAAATCAGCTCCACCGCACAGAACGCCAAGGGCATCAGCTACTAA MAMDPINGGMQLFNQATSSLNMNNNIADAAGDSKSSKAMEDAMARSDASSARMIDLQSRHAEKMKVENTLQAMQSAEDDAANKKISSTAQNAKGISY Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0032 CDS 30305 31210 - sigma-54 dependent trancsriptional regulator YP_001185539.1 146305074 5106707 PFAM: sigma-54 factor, interaction domain-containing protein ; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase Cytoplasmic[Class 3] biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0030528|transcription regulator activity|IEA TIGR02974|phageshock_pspF|psp operon transcriptional activator|equivalog|9.5e-24||Regulatory functions|DNA interactions PF02954|HTH_8, Bacterial regulatory protein, Fis family|259|299|8e-05 ; PF00158|Sigma54_activat, Sigma-54 interaction domain|24|230|7e-82 ; PF07728|AAA_5, ATPase family associated with various cellular activities (AAA)|33|142|9e-07 COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ATGAGTGAGTTCGATTGGCCGGATGCTTTTTGGATGAATGACGGTGGTTTACCCAATCTCGAAGTCGTGGCAAGCAGCATCTCCGAACTGAATATCGATGTCCTGCTTACCGGCGAAACCGGTTCTGGCAAGGACACACTTGCGCAATACCTGCACAAGCTGTCCGGACGCAAAGGCCCATTCGTGGCAATGAACTGCGCAGCAATTCCGGAATCTCTGTTCGAGAGCGAGCTGTTCGGTGTGACCAGCGGCGCCTACACCGGCGCTGATCACTCCAGAATGGGCTATGTGGAGGCCGCCCAGGGCGGCACGCTGTACCTCGACGAAATCGACAGCATGCCCGCGTTCCTGCAAGCCAAGCTCCTGCGGGTGCTGGAGACCCGCCAGATCGAACGCCTGGGGTCGACCACGCCAGTCCCCTTGGATATCTGCGTCGTGGCCTCCGCGCAACGCTCGTTGGACGCCTTGGTCGAGCAGGGCGAGTTTCGCCGGGATCTCTACTTCCGCCTCAATGTCCTGACGCTGAGGCTGCCCGCGCTGAGACAGAAGCGCGAGTGGATCATCCCGATGTTCGAGCGCTTCGCATTCGAGGCCTCGCAGGACATGGACACGGCGCTACCGGTCATCGACCCTGCCATCGAACATGTACTGCTGAACCATGACTGGCCCGGTAATCTCCGCGAGCTCAAATCTGCGGCGAAGCGCCACGTGCTGGGTATAAACCTTTTGGGTATAGAAGCCGAACAGCCCATCGAGTGCGATCTCAAGTGCCAACTCCGGCTGATCGAAAAGGTGTTGATCCAGGAATCCCTGCAGCGCCACGAACATTGCATCGAGGCCGTGCTCCACGAGTTGGACATTCCCCGGCGCACGCTCTATCACCGCATGAAAGAGCTCGATGTCTGA MSEFDWPDAFWMNDGGLPNLEVVASSISELNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPESLFESELFGVTSGAYTGADHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIERLGSTTPVPLDICVVASAQRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAFEASQDMDTALPVIDPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIEAEQPIECDLKCQLRLIEKVLIQESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0033 CDS 31594 32523 - sigma-54 dependent trancsriptional regulator YP_001185540.1 146305075 5106708 PFAM: sigma-54 factor, interaction domain-containing protein ; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase Cytoplasmic[Class 3] biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0030528|transcription regulator activity|IEA TIGR02974|phageshock_pspF|psp operon transcriptional activator|equivalog|5.9e-23||Regulatory functions|DNA interactions PF07728|AAA_5, ATPase family associated with various cellular activities (AAA)|34|195|2e-06 ; PF00158|Sigma54_activat, Sigma-54 interaction domain|33|231|2e-79 ; PF02954|HTH_8, Bacterial regulatory protein, Fis family|266|307|3e-08 COG3829|RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ATGAGTAGGGGGGTCGCCGCAGAAAAAAGTGCGCGCAGACATGGTGGTACGGACGTTCCCGAGTTGGGCATTACGCTATCTGCAGGACATTTCAGAATGGACCTGCTTCTGTGTGGGGAAACTGGAACTGGCAAAGATGTGCTGGCGAGGCACATCCACGATCTGTCCGGCAGGACAGGCGCTTTCGTCGGCATAAACTGCGCCGCCATTCCGGAGGCATTGGCCGAAAGCCAGCTATTCGGTGTTGCCAGCGGTGCTTTCACTGGGGCCAACCGGTCACGCCAGGGTTATATCGAAGCCTCGAACGACGGTACGCTGTACCTCGACGAGATCGACAGCATGCCCCTGCAACTACAGGCGAAGCTGCTGCGCGTGCTTGAGACCCGTGGCGTCGAACGCTTGGGCACGACGAAATTCATCCCTCTCAATCTGCGGATCATCGCCTCGACGCAACGCCCTCTCGAAGAGCTGGTGGAGCAGGGACTGTTTCGCCGCGACCTGCTTTTCCGGCTCAATGCAATGACGCTGTCATTGCCTCCCTTGCGCCAGCGGCGCGAGTTGATCCTGCCGCTGTTCAAGCGATTCACCCGAAGCCTTGGCGCGAAGCAGGCAAATGGCGCACAAGCCCTGGACTCTCAACTGATCCAGCTACTGCTCAGCCACCCCTGGCCGGGCAATATCCGTGAACTGAAGTCCGCCGCCAAACGCTACGTGATAGGACTGCCGCCTATCGATGCCGGCGTCCTTGCTGATCTCGAAGACGGTGATTTTCCCCACGACAGGGGGCTCAAGAAGCGCATGCGCGCTGTGGAGAAAATGCTCATTCAGGACGCCTTGAAGCGTCACAAGAACGGTCTGGAGGCAGTCGCCGAGGAGCTCGGCATATCCCGTCGTACCCTGTATCAGCGAATAAAGGAACTTGACGTCTAG MSRGVAAEKSARRHGGTDVPELGITLSAGHFRMDLLLCGETGTGKDVLARHIHDLSGRTGAFVGINCAAIPEALAESQLFGVASGAFTGANRSRQGYIEASNDGTLYLDEIDSMPLQLQAKLLRVLETRGVERLGTTKFIPLNLRIIASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPPLRQRRELILPLFKRFTRSLGAKQANGAQALDSQLIQLLLSHPWPGNIRELKSAAKRYVIGLPPIDAGVLADLEDGDFPHDRGLKKRMRAVEKMLIQDALKRHKNGLEAVAEELGISRRTLYQRIKELDV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0034 CDS 32882 33268 - hypothetical protein YP_001185541.1 146305076 5106709 Unknown[Class 3] GTGCCGACAACTCACATGCGCCCGGCGGAACATGGACGATCACTTCGAGAAGAGGAGTGGCTGAAGAACGATCAGGCCATCGACCAGGGCCGTTACAGCTCGATCGCCTTGACCGGCAGTTTCGAGCATCAGCACCTCGCTCAATCAGACGGTCAGCTCGCTGCGGCAGCGCAGGAATACCCAAGGCGATGTAAAGGCGTGAGATGCAAAATCGCCGAGCCGTCCCTTACTTCCGCCAAGCCTGCAAAATGCAATCATGGTTTCTGCAAAAAAGCTGGCCGCGTTCTTTTCTGCTTCAACCCAGCAATAGCATTTCGCCACAGACATATACCGCTCGTCGTTTTTTATTTATCCAATCAAACAATAACAGCTCATCTTTTAGGGTAA MPTTHMRPAEHGRSLREEEWLKNDQAIDQGRYSSIALTGSFEHQHLAQSDGQLAAAAQEYPRRCKGVRCKIAEPSLTSAKPAKCNHGFCKKAGRVLFCFNPAIAFRHRHIPLVVFYLSNQTITAHLLG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0035 gene 33299 35920 - 5106710 No localization assigned and computational localization prediction using PSORTB not performed[] ATGTACGCGAATGCAGCCATTTCTATCCGCCAACCTTCCGCTATCCGCCAGCTCAACAGCGAACAGTTGAAGATGCTCCGCGCCTTCATTCAGAAACGCGTGATGAACCCGGACGATGCCGACGACATCCTGCAGGGCACCTTCGTCGAAGCACTGCGCAACGAGCACAAGTTCCAGCACGCCAGCAAGCCGCAGACGTGGCTGTGCGGTATTGCCCTGAATCTGATTCGCAACCATTTCCGGCGCCTGTACAGCCAGCCTTATCAGGAAGCCTGGGAGGACCAATGGCATCTGGAAAACGAACATGCCGACGACATTGGCCAGCAAGTCGACGGACACCGGCAACTGGCCCGTGTCGTCAGTGCGATCAGCGACCTGCCGAACAATATGCAACGGGTGATCGAAGTCAGCCTGGCCATGGACGGTAGGTATCCGCTCCATAAACCCCACCTGCCCATAGCCCGCAGATCATTGGAAGCTGAACTCCCGTTTTCACCGGAGTTCATCCCATGATGCGTCCCGACGCCAAGGTGCAGAAGGTCTACCTCTACCCAAAACCCGTCGATTTCCGCAAATCCATCAACGGCCTGGCCGCTCTGGTCGAGCTGGACATCAAGGTGGAAGTGTTCAACCCCGTGCTGTTCGTGTTCCTCAACCGCACCCGCAGTCAGGTCAAGATCCTCTACTGGGAGCGCAATGGCTTCTGCCTGTGGCTCAAGCGTTTGGAAGCCGAACGCTTCAAGACCAAGCCCGATGCCGGCGACGAGGCCATCGAGCTGACGGTCGATGAGTTGAACTGGCTGCTCGACGGCATCGACCTGTGGCGCAACCGTCCGCACCAGATACTGACGCCGCGTTTCGTGACCTGAGCCGGTATAATCCACGGCCATGATCGCCGTGCCCGCCCCCCTTCCTGACGACCCAATCCTGCTCAAGCATTTACTGCTGCTGGCCAGTGAACAGGCGGCTGCGAAAGATGCTCGCATAGAACAACTTCAGGAACAGGTCGCCCTGCTGCGCCACAAGTTGTTCTCGCCCAAGTCCGAGCGCAGCCCTGAAGACGCCGACTCACCGCAGTTGGCCATGTTCAACGAGGTCGAAGAGCTGATCGAAGCGGCCGCTGCGCCAAGCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGAAATCGTTGCGCCGGTCAAGCGCCGTGGCAAGCGCAAGCCGTTGCCGGCCAACCTGCCGCGTGTCGAAGTCATCCACGACCTGCCCGAGCACGAGCTGACTTGCGCCTGTGGCGCCTGCAAACAAGTCATCGGCGAGGAGACCAGCGAACAGCTGGAGATTATCCCGATGCAGGTGCGGGTCATCCGCCATATCCGCAAGACCTACGCCTGCAAGGCCTGCGAAGCGGCGCCGCTCACTGCCGACAAGCCGGCCCAACTGATCGAGAAGAGCCTGGCCAGCCCCAGCGTGTTGGCCATGCTGCTGACCACCAAGTACGCCGACGGCATCCCGCTGTACCGCTTCGAGAAGATGCTCAGCCGCCACGGCGTCGACATACCACGCCAGACCCTGGCGCGCTGGGTGATCCAGAGCGGTGAACAGCTGCAACCGCTGCTCAACCTGCTGCGCGACAAGCTGCTCGAATACCCCGTTTTGCACTGCGACGAAACGCGCCTGCAGGTGCTGCATGAACCGGGACGCGATCCCACCGCGCAGTCCTGGATGTGGGTACAAAGCGGTGGACCACCGGATAAGCCGGTGATCCTCTTCGACTACACCGCCAGCCGCGCGCAGGAGGTGCCGCTGCGCTTGCTCGACGGCTATCGCGGCTACCTGATGACCGACGACTACGCCGGCTACAACGCCGTGGCCGCGCAAGAAGGCATCGAACGCCTCGGCTGCTGGGCGCATGCGCGGCGCAAGTTCGTCGAGGCGCAGAAAGTGCAACCCAAGGGCAAAACCGGCCGTGCCGACATGGCGCTGAACCTGATCAACAAGCTCTACGGCATCGAGCGTGACCTGAAGGACGCCTGCGATACCGAGCGCCTGGTCGCCCGTCAGCAACGCAGCCAGCCGCTGCTCGATCAACTCAAGACCTGGCTGGACAAGACCCAGCCGCAGGTCGTCGGGCAGACGGCGCTGGGCAGGGCGGTGAACTACCTGGCCAGCAACTGGAGAAAGCTGGTGCGCTACGTCGAAGGTGGACATCTGCCGATCGACAACAACCGCGCGGAGAACGCCATCCGCCCGTTCGTTATCGGGCGCAAGAACTGGCTGTTCAGCGACACGCCCAAGGGGGCCACGGCCAGCGCACAGATCTACAGCCTGATCGAAACCGCCAAGGCCAATGGCCAGGAGCCTTACGCCTGGCTGCGCCACATCCTCGAACGCCTGCCGGCCGCCAATAGCGTCGAGGATTACGAAGCGCTGCTGCCGTGGAATTGCTCGCCAGTGAGCGCATCCTGACAGACCCGCCCCATCAGCAGTAGGTGGGGTTTATGGAGCGGTTACGACGGTAGCTACCAGGACACCGCCTCCTCACTGGGCGTCCCGATTGGCACGGTGCGCTCACGCCTGTCCCGCGCAAGAGAGCAGTTGAAAAGGCAGATCGATCCGTTTGCCTGA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0036 CDS 33458 35032 - transposase IS66 YP_001185542.1 146305077 5106934 PFAM: transposase IS66 Cytoplasmic[Class 3] PF03050|Transposase_25, Transposase IS66 family|140|332|8e-64 COG3436|COG3436, Transposase and inactivated derivatives [DNA replication, recombination, and repair]. ATGATCGCCGTGCCCGCCCCCCTTCCTGACGACCCAATCCTGCTCAAGCATTTACTGCTGCTGGCCAGTGAACAGGCGGCTGCGAAAGATGCTCGCATAGAACAACTTCAGGAACAGGTCGCCCTGCTGCGCCACAAGTTGTTCTCGCCCAAGTCCGAGCGCAGCCCTGAAGACGCCGACTCACCGCAGTTGGCCATGTTCAACGAGGTCGAAGAGCTGATCGAAGCGGCCGCTGCGCCAAGCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGAAATCGTTGCGCCGGTCAAGCGCCGTGGCAAGCGCAAGCCGTTGCCGGCCAACCTGCCGCGTGTCGAAGTCATCCACGACCTGCCCGAGCACGAGCTGACTTGCGCCTGTGGCGCCTGCAAACAAGTCATCGGCGAGGAGACCAGCGAACAGCTGGAGATTATCCCGATGCAGGTGCGGGTCATCCGCCATATCCGCAAGACCTACGCCTGCAAGGCCTGCGAAGCGGCGCCGCTCACTGCCGACAAGCCGGCCCAACTGATCGAGAAGAGCCTGGCCAGCCCCAGCGTGTTGGCCATGCTGCTGACCACCAAGTACGCCGACGGCATCCCGCTGTACCGCTTCGAGAAGATGCTCAGCCGCCACGGCGTCGACATACCACGCCAGACCCTGGCGCGCTGGGTGATCCAGAGCGGTGAACAGCTGCAACCGCTGCTCAACCTGCTGCGCGACAAGCTGCTCGAATACCCCGTTTTGCACTGCGACGAAACGCGCCTGCAGGTGCTGCATGAACCGGGACGCGATCCCACCGCGCAGTCCTGGATGTGGGTACAAAGCGGTGGACCACCGGATAAGCCGGTGATCCTCTTCGACTACACCGCCAGCCGCGCGCAGGAGGTGCCGCTGCGCTTGCTCGACGGCTATCGCGGCTACCTGATGACCGACGACTACGCCGGCTACAACGCCGTGGCCGCGCAAGAAGGCATCGAACGCCTCGGCTGCTGGGCGCATGCGCGGCGCAAGTTCGTCGAGGCGCAGAAAGTGCAACCCAAGGGCAAAACCGGCCGTGCCGACATGGCGCTGAACCTGATCAACAAGCTCTACGGCATCGAGCGTGACCTGAAGGACGCCTGCGATACCGAGCGCCTGGTCGCCCGTCAGCAACGCAGCCAGCCGCTGCTCGATCAACTCAAGACCTGGCTGGACAAGACCCAGCCGCAGGTCGTCGGGCAGACGGCGCTGGGCAGGGCGGTGAACTACCTGGCCAGCAACTGGAGAAAGCTGGTGCGCTACGTCGAAGGTGGACATCTGCCGATCGACAACAACCGCGCGGAGAACGCCATCCGCCCGTTCGTTATCGGGCGCAAGAACTGGCTGTTCAGCGACACGCCCAAGGGGGCCACGGCCAGCGCACAGATCTACAGCCTGATCGAAACCGCCAAGGCCAATGGCCAGGAGCCTTACGCCTGGCTGCGCCACATCCTCGAACGCCTGCCGGCCGCCAATAGCGTCGAGGATTACGAAGCGCTGCTGCCGTGGAATTGCTCGCCAGTGAGCGCATCCTGA MIAVPAPLPDDPILLKHLLLLASEQAAAKDARIEQLQEQVALLRHKLFSPKSERSPEDADSPQLAMFNEVEELIEAAAAPSEAEAEAEAEAEAEAEEIVAPVKRRGKRKPLPANLPRVEVIHDLPEHELTCACGACKQVIGEETSEQLEIIPMQVRVIRHIRKTYACKACEAAPLTADKPAQLIEKSLASPSVLAMLLTTKYADGIPLYRFEKMLSRHGVDIPRQTLARWVIQSGEQLQPLLNLLRDKLLEYPVLHCDETRLQVLHEPGRDPTAQSWMWVQSGGPPDKPVILFDYTASRAQEVPLRLLDGYRGYLMTDDYAGYNAVAAQEGIERLGCWAHARRKFVEAQKVQPKGKTGRADMALNLINKLYGIERDLKDACDTERLVARQQRSQPLLDQLKTWLDKTQPQVVGQTALGRAVNYLASNWRKLVRYVEGGHLPIDNNRAENAIRPFVIGRKNWLFSDTPKGATASAQIYSLIETAKANGQEPYAWLRHILERLPAANSVEDYEALLPWNCSPVSAS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0037 CDS 35052 35411 - IS66 Orf2 family protein YP_001185543.1 146305078 5106711 PFAM: IS66 Orf2 family protein Cytoplasmic[Class 3] PF05717|Transposase_34, IS66 Orf2 like protein|10|116|4e-35 ATGATGCGTCCCGACGCCAAGGTGCAGAAGGTCTACCTCTACCCAAAACCCGTCGATTTCCGCAAATCCATCAACGGCCTGGCCGCTCTGGTCGAGCTGGACATCAAGGTGGAAGTGTTCAACCCCGTGCTGTTCGTGTTCCTCAACCGCACCCGCAGTCAGGTCAAGATCCTCTACTGGGAGCGCAATGGCTTCTGCCTGTGGCTCAAGCGTTTGGAAGCCGAACGCTTCAAGACCAAGCCCGATGCCGGCGACGAGGCCATCGAGCTGACGGTCGATGAGTTGAACTGGCTGCTCGACGGCATCGACCTGTGGCGCAACCGTCCGCACCAGATACTGACGCCGCGTTTCGTGACCTGA MMRPDAKVQKVYLYPKPVDFRKSINGLAALVELDIKVEVFNPVLFVFLNRTRSQVKILYWERNGFCLWLKRLEAERFKTKPDAGDEAIELTVDELNWLLDGIDLWRNRPHQILTPRFVT Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0038 CDS 36171 37328 + TyeA family type III secretion effector delivery regulator YP_001185544.1 146305079 5106712 TIGRFAM: type III secretion effector delivery regulator, TyeA family ; TIGRFAM: type III secretion effector delivery regulator, TyeA family; type III secretion regulator YopN/LcrE/InvE/MxiC Bacterial secretion system [KEGG] Host Associated[Class 3] ; Extracellular[Class 3] TIGR02511|type_III_tyeA|type III secretion effector delivery regulator, TyeA family|equivalog_domain|8.1e-28||No Data|No Data ATGATCAGACCTATCCCCAACGCCAGCTCGATCCTGCACATACCGTCTGTCGCCCGTGCAGCATCCCCTGCCACTCCCCTTGCGCAGGTTCGGTCAGGTGCTGCGACCACCACTGGCACGAGTGCCCAGCAAGCCTCGAAATTCGCCGCCGCGCTGGTACAGAACAGCCGCGAGTTGGGGCGTCGTGATCTGTTCGCCAAGATCAATGCTCTGCAATCCCAGGCAAGCAAGCAGCATGAGTTGGCCCACCTGCTGCTGGCGACCCATGAACGGGGCATGGAGGAGTCGGCTCGTGCACTGCGCAAGACGCTGAAGAACGGCCAACTGCTGCGAATGGAGCGGGGCAAGCTGCTCAAGCAGATCGTCGACAGCATGGCGGGCGATGCAGCCAAGGCCCATGCCCTGTTGCAGGCGGCGGCTCGACAGGCCAAGGGCGAGAAGTCGCTCAATGAACAGCAGGCGCTGAATCAGCAACTCCAGCTCTTGCGGCAACAGCATGGGCGCAATCCCCGGCCTCTGTTCAATACGGGTAACAACACCAGGATCCTGGCGCGCGGAGGCGAGGATCCTCAGCGGCGAGACAAGCTGCGCAGCCTCTACAGCGTTGCGGTGACCGAACAGCTGAACGTGGTCGGGCTGATCGAGGCTCTGCTGAATAGCACCCAGGACGATGGGCAGAAGGATGGCCGCGAAGGCTTCGAAGCCGTCCTGCGCGAGATCCGCCAGGTCGTGGCGCGCGACATGGCGGAACTCGATGGCAGCGCATCACCACAGAAACTGCGAACCATGATGTACGCCATGAGTACGGCGCAGTACGTGGCAACCCTGTTCGGTGGCTGCGAACACCTGCTGGGCCGCATGCGCAACAAGAATCCCGCCATGCAGGTTGAGACCTCGGCGTTTCTCAAGAACCTGCTGGGGCTGATCGGCAAGGGCATGGCGCTGAACGACACCCTTCAGCTGACGCAGCAGATCGGCGGTCGGCAACTCAAGCACCAGCTGGCGTTCCTCAACGGGCTGCGCCCGATGCTGCATCAGCTGCCAATCATGCTATGGCGCGACATCAAGAGCCGACAGAACGCGCTGGGTAATCTGCTCTCGCTGATGGCGGCGTTGACCAGTGAAGAGCAGAAGCGCCTCAAGGAGGGCATCGCCTGA MIRPIPNASSILHIPSVARAASPATPLAQVRSGAATTTGTSAQQASKFAAALVQNSRELGRRDLFAKINALQSQASKQHELAHLLLATHERGMEESARALRKTLKNGQLLRMERGKLLKQIVDSMAGDAAKAHALLQAAARQAKGEKSLNEQQALNQQLQLLRQQHGRNPRPLFNTGNNTRILARGGEDPQRRDKLRSLYSVAVTEQLNVVGLIEALLNSTQDDGQKDGREGFEAVLREIRQVVARDMAELDGSASPQKLRTMMYAMSTAQYVATLFGGCEHLLGRMRNKNPAMQVETSAFLKNLLGLIGKGMALNDTLQLTQQIGGRQLKHQLAFLNGLRPMLHQLPIMLWRDIKSRQNALGNLLSLMAALTSEEQKRLKEGIA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0039 CDS 37328 39412 + HrcV family type III secretion protein YP_001185545.1 146305080 5106713 TIGRFAM: type III secretion protein, HrcV familyPFAM: type III secretion FHIPEP protein ; TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein Bacterial secretion system [KEGG] Cytoplasmic Membrane[Class 3] TIGR01399|hrcV|type III secretion protein, HrcV family|subfamily|0||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00771|FHIPEP, FHIPEP family|29|674|0.0 COG4789|EscV, Type III secretory pathway, component EscV [Intracellular trafficking and secretion]. ATGGGAGCGGTCATCGATTTTCTGAACGGTATCGCGCTGGCTGCCATGCGCCGCTCGGAGATCGTCGGCGCCTTCGTGGTCATCGCCATCATCTTCATGATGATCACGCCGATGCCCACGGAGCTGATGGATGTGCTGATCGCGATCAATATCTGCATTTCCTGCCTGATGATCATGCTGGCCATGCATCTGCCCCGGCCCCTGGCGTTCTCGACGTTTCCGGCGGTGCTGCTGCTGACCACCATGTTTCGCCTGGCCCTGTCGATCTCCACCACGCGCCTGATCCTGCTCGAGCAGGACGCCGGGCACATCGTCGAGGCATTCGGCGAGTTCGTCGTGGGTGGCAACCTGGCCGTCGGCGTGGTGATATTCCTGATCCTGACCATCGTCAACTTCCTCGTCATCACCAAGGGCTCGGAGCGGGTGGCGGAGGTCGGCGCGCGCTTTACCCTGGACGCCATGCCCGGCAAGCAGATGTCCATCGACAGCGATCTGCGCGCCAACCTCATTTCGGTGAGCGAGGCGCGTAACCGCCGGGCCGAACTGAACAAGGAAAGCCAGCTGTTCGGCGCCATGGATGGGGCGATGAAGTTCGTTAACGGCGATGCGATCGCCAGCCTGATCATCATCGCCATCAACATGATCGGCGGTATGGCCATCGGCGTGGCGCAAATGGGGATGAGCGCGGGCGATGCCTTGCAGGTGTACACCATCCTCACCATTGGTGATGGCCTGGTTTCGCAGATCCCGGCGCTGATGATTTCTGTCACCGCCGGTATCGTCATCACCCGGGTGCCCAACGAGCAGAGGCAGCAGACCAACATCGGCCGGGAGATCGCCGAGCAGCTGACCAGTCAGCCCAAGGCCTGGATCATCGCCTCGGTGGCCATGCTCGGTTTCGCCGCATTGCCGGGCATGCCCACCCTGACCTTCATCATCATCGCCATCATCTGTGGTTGCGGCGGCTTGTTGCAGTTGCAACGTGCGCGTACTTCCAGTGCGGCGGAGGATGATCCGGAAGTCATCCCTCCGGAGATGAATGGTCAGGAGGACCTGCGTACCTTCTCGCCAAGTCGTCAGTTCGTGCTGCAATTTCATCCCAGCCAGGATGCGCATCAGGTCGCGGCCCTGCTCAGCGAGATTCGCCAGCGGCGCAACAGGCTGGTGGTGCAGTACGGCCTCACGTTGCCCTCGTTCATCATCGAACAATCGCCGCTCCTGCCTCCGGACGAATTCCGTTTCTCGGTTTACGAGGTGCCTCTGTTCAAGGCCACGCTGACGCAAAGCCAGTTGGCCGTGCCCGCACGCAGTCTGCCACCGGGGGCTGTTTGCGGTTCCAACGAGCGTCAGGAGGAAGACTGGGTATGGATGCCGGCCGATGATCCCATGCTGCAGAACGACGAGTTGGAGATCGTCAGCGCCGCGACGCTGATCGTCGAGCGCATGGAGCGTGCCATGCAGGCCTGCGGGCCGCAGTTCATCGGCTTACAGGAAACCAAGGCGATCCTCGGCTGGCTGGAATCGGAGCAGCCCGAGCTTGCCCAGGAAATGCAGCGGGTACTGCCCTTGGCCAGGTTTTCCGCGATTCTCCAGCGTCTGGCCGCCGAATGCGTGCCGCTGCGCTCCGTTCGCCTGATCGCGGAGACCCTGATCGAGCACGCCCAGCACGAGCGAGATGTGACTGTGCTGACCGACTACGTACGCATCGCCCTCAAGTCGCAGATCTACCACCAGTACTCGAGCGCGGAGGGCTTGCTGGTGTGGCTGCTGACCCCGGAAAGCGAAGGCATCCTGCGTGACGGCTTGCGTCAGACCCAGACCGAGACCTTCTTCGCCCTGAACCATGAAACCAGCCAGCTACTGCTGCAACAACTGCACATGGCCTTTCCGATGCGGGCGCCTGAGCAGGCGGTGCTGCTGGTGCCGCAGGATCTGCGCAGCCCACTGCGCACGCTGCTGCAGGAGGAGTTTCACCATGTGCCGGTGCTGTCCTTCGCTGAAATCAGCAGCGCTGCTCGGATCAAGGTAATGGGTCGATTCGACCTGGAAGAGTCGGTGGCGCTGGACAATGACTACGCCGCTTGA MGAVIDFLNGIALAAMRRSEIVGAFVVIAIIFMMITPMPTELMDVLIAINICISCLMIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTTRLILLEQDAGHIVEAFGEFVVGGNLAVGVVIFLILTIVNFLVITKGSERVAEVGARFTLDAMPGKQMSIDSDLRANLISVSEARNRRAELNKESQLFGAMDGAMKFVNGDAIASLIIIAINMIGGMAIGVAQMGMSAGDALQVYTILTIGDGLVSQIPALMISVTAGIVITRVPNEQRQQTNIGREIAEQLTSQPKAWIIASVAMLGFAALPGMPTLTFIIIAIICGCGGLLQLQRARTSSAAEDDPEVIPPEMNGQEDLRTFSPSRQFVLQFHPSQDAHQVAALLSEIRQRRNRLVVQYGLTLPSFIIEQSPLLPPDEFRFSVYEVPLFKATLTQSQLAVPARSLPPGAVCGSNERQEEDWVWMPADDPMLQNDELEIVSAATLIVERMERAMQACGPQFIGLQETKAILGWLESEQPELAQEMQRVLPLARFSAILQRLAAECVPLRSVRLIAETLIEHAQHERDVTVLTDYVRIALKSQIYHQYSSAEGLLVWLLTPESEGILRDGLRQTQTETFFALNHETSQLLLQQLHMAFPMRAPEQAVLLVPQDLRSPLRTLLQEEFHHVPVLSFAEISSAARIKVMGRFDLEESVALDNDYAA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0040 CDS 39429 40343 + YscD/HrpQ family type III secretion apparatus protein YP_001185546.1 146305081 5106714 TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family Cytoplasmic[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR02500|type_III_yscD|type III secretion apparatus protein, YscD/HrpQ family|equivalog|4.7e-19||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis ATGTACGAACTGAGGGTATTGACCGGCCTGCACAAGGGCGCCGCACTGCCACTGATCGGTGAGCAATGGCTCATCGGTGCCGAAGAGGGTCGTGATCTGGCGTTGCACGATCCAGGGGTGGAAACCCTTCACTGCCGCTTGCAGCGGGCGGGCGACAGCTGGCAGTTGCTGGCCGAGGAAGGGGCCGTGCTCGACGGGGAGGGACACTCCCATGCGTCGATGGAAGTACTGCTTGATTGCCCACTCGTGCTCGGCTCCGTCTGGGTGTACCTGGCCGCCGCTGAGTCACCCTGGCCAACGTTGCCGGCACTCGTCGGTCATCCCGGCGAAGACGGCGACAGCAAGGCCTCTGCGGAGGTCGGGGAACGAGGCCGTGTGCGTCTGCTCAATCGCGGCACCGGCATAGCGCTTGGCGTCTTGCTGGGCGTCATGGGCAGCGCCTGGAGCCTGAGTTGGCCGGTTGGCTCCGCTTCGGGACCTGCGGCGGTGCCGACGAGCGAGCCTGCCGCGGTTAGCGATGGCCGCACCCTATTGCAGAAGGACGAGGCGGTGCGCGTGCTCAAGCAGATGCTGAGTGAACGCCTGCTGACGGCCGTCTCGGTCGAGCCGAATGAGCAAGGTGTGGCGCTCATGGGCTCGCTGCAGGGCGAAGGCATGCTGGTCTACGAACGCATGCTGCAACGTTTCGAGAAGGACTATGAAACGGATTTCGTGTTGCAGGACCAGGTTTCAAGTGGTGCCGCAGGGCTGCCATTCGTGATCGTGCAGATCATTGCCGGCCCGCGTGGGCACCTGGTGATGGAGGATGGCCGGCGCTTGCATGTCGGCGACAAGCTGGACGGCCTGCGCCTGGTACGCATCGATAACGAGCGCATCCTGTTCGATGGTGTCCGCCGTTATGAGGTGGCCTGGTGA MYELRVLTGLHKGAALPLIGEQWLIGAEEGRDLALHDPGVETLHCRLQRAGDSWQLLAEEGAVLDGEGHSHASMEVLLDCPLVLGSVWVYLAAAESPWPTLPALVGHPGEDGDSKASAEVGERGRVRLLNRGTGIALGVLLGVMGSAWSLSWPVGSASGPAAVPTSEPAAVSDGRTLLQKDEAVRVLKQMLSERLLTAVSVEPNEQGVALMGSLQGEGMLVYERMLQRFEKDYETDFVLQDQVSSGAAGLPFVIVQIIAGPRGHLVMEDGRRLHVGDKLDGLRLVRIDNERILFDGVRRYEVAW Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0041 CDS 40340 41698 + FliI/YscN family ATPase YP_001185547.1 146305082 5106715 TIGRFAM: ATPase, FliI/YscN familyPFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region ; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase Bacterial secretion system [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA ; molecular_function|GO:0046961|hydrogen ion transporting ATPase activity, rotational mechanism|IEA TIGR02546|III_secr_ATP|type III secretion apparatus H+-transporting two-sector ATPase|equivalog|5.9e-246|3.6.3.14|Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF02874|ATP-synt_ab_N, ATP synthase alpha/beta family, beta-barrel domain|31|95|7e-05 ; PF00006|ATP-synt_ab, ATP synthase alpha/beta family, nucleotide-binding domain|157|367|1e-81 COG1157|FliI, Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]. GTGAATGCTCCTGCCACCGAGCTGCAGGAATGGGTACGTTTTCAGGCTGCTCGGCTGGGCACGTTGTCGGCGGTGCAGGTCAGCGGCCGGGTGAGCGCCGTCAGCGGCATCCTGCTGGAGTGCCAGGTGCCAGCCGCCAAGGTGGGCGAGTTGTGCGAGGTGAGCAAGGCCGATGGCAGCAACATGCTGGCCGAGATAGTCGGCTTCACGCCTGACTGCACCCTGCTCAGCGCACTGGGCACGCCGGACGGCATCCAGGTTGGAGCGACCATTCGCCCTCTGGGCATTGCCCATCGTATCGGTGTCGATGACAGCCTGCTTGGCAGCGTGCTGGATGGTTTCGGCCGGCCGTTGCTGGGCCAGGCGCAGGGGGCTTTCGCCGGCCCTCATGATGCTCGGCAGACGCTACCGGTGATAGCCGATGCGCTGCCACCGACGCAACGTCCGCGTATCACCACTGCCCTGCCGACCGGTATTCGCTCCATCGACAGCGCCATGCTGCTGGGCGAGGGGCAGCGGGTGGGCCTGTTCGCCGGGGCCGGCTGCGGCAAGACCACGCTGATGGCGGAACTGGCCCGCAATATGGCCTGCGATGTGATCGTGTTCGGCCTTATTGGCGAACGTGGCAGGGAACTGCGTGAGTTCCTCGACCACGAACTGGACGACACCCTGCGCAAACGCTCGGTGCTGGTCTGCGCGACGTCCGATCGTTCCAGTATGGAGCGGGCTCGCGCAGCCTTTACCGCCACGGCCATCGCCGAGGCATACAGAGCCAGAGGCCTGAAGGTATTGCTGTTGATCGACTCACTGACCCGTTTCGCCCGCGCCCAGCGTGAAATCGGTATTGCCGCCGGCGAGCCGCTTGGGCGTGGCGGCTTGCCTCCTTCGGTCTACACCTTGCTGCCGCAACTGGTCGAGCGTGCCGGAATGAGCGAGAGCGGCTCGATCACGGCGTTGTACACCGTGCTCATCGAGCAGGACTCGATGAACGACCCGGTGGCCGACGAGGTGCGTTCGTTGCTCGATGGACACATCGTGATGTCGCGCAAGTTGGCCGAGAAAGGCCACTACCCGGCCATCGACGTGCCGGCCAGCATCAGTCGTGTACTCAGCAATGTCGCCCCCCGCGAGCATCAGCGTGCCAACAATCGGCTGCGTCGCCTGATGGCGGCCTATCGACAGGTGGAGATGCTGTTGCGTCTTGGCGAGTACCAGCCAGGCACCGACCCGGTGACGGATTGCGCCGTACAGCTGCATGAGCCGATCAATGCCTTCCTGCGTCAGGACCTGCGCGAGCCTTCGCCGTTGCCGGTGACCCTTGAGGCCCTGATGCAACTGACCGCGGCGCTTCCGGAGTGA MNAPATELQEWVRFQAARLGTLSAVQVSGRVSAVSGILLECQVPAAKVGELCEVSKADGSNMLAEIVGFTPDCTLLSALGTPDGIQVGATIRPLGIAHRIGVDDSLLGSVLDGFGRPLLGQAQGAFAGPHDARQTLPVIADALPPTQRPRITTALPTGIRSIDSAMLLGEGQRVGLFAGAGCGKTTLMAELARNMACDVIVFGLIGERGRELREFLDHELDDTLRKRSVLVCATSDRSSMERARAAFTATAIAEAYRARGLKVLLLIDSLTRFARAQREIGIAAGEPLGRGGLPPSVYTLLPQLVERAGMSESGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVMSRKLAEKGHYPAIDVPASISRVLSNVAPREHQRANNRLRRLMAAYRQVEMLLRLGEYQPGTDPVTDCAVQLHEPINAFLRQDLREPSPLPVTLEALMQLTAALPE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0042 CDS 41701 42147 + hypothetical protein YP_001185548.1 146305083 5106716 Unknown[Class 3] ATGGAAGACGAGCTGGAAGCCGATCCGCAACGCCTGGCCCTCGAACAGGCCATTCAAGTGCTCAGGCCCCTGCGCCAGCACCGCCAGGCAAGTGCCGAGCGGCAGCAGCGGCAGATGCAGCAGACGCTTGCCAGCAGCCGTGAACGTTTGGCGGAAACCCGTGAACGGCTGGGCAGCGAGCGCCAGGCGCAATTGGCACGTCGCGAGGCACTGGCGCAGCAACACGTGGATCGTTGCCTGAGCCTGGATGAAGTCGAGCTCTGGCACAACCAGGAGCGGGCGATGCTCGATCGCCTGGCGCACATGCGTCAGGACATTCACCGGCAGGGCCTGGCGATCGAGCAGCAACAACATCAACTGCAGGTCATGCAGGCTCAAGCCAAGGCGGCTCAGCGTGCGGTGGAAAAACTGTCCTGCCTGGCCGAGGCGATCAACGATGAAAACTGA MEDELEADPQRLALEQAIQVLRPLRQHRQASAERQQRQMQQTLASSRERLAETRERLGSERQAQLARREALAQQHVDRCLSLDEVELWHNQERAMLDRLAHMRQDIHRQGLAIEQQQHQLQVMQAQAKAAQRAVEKLSCLAEAINDEN Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0043 CDS 42137 42673 + hypothetical protein YP_001185549.1 146305084 5106717 Unknown[Class 3] ATGAAAACTGAACACGCAGCGCGCCCTCAGCTGATGCAAACCCTGCAGCAGGGTGCAGCCCCACAGGGCAACCTGGCTGCACTCAAGGAGACGGGCTGGTCACGACGCAGCGATTTCGAGTCGAGCCTGTCGAGTTGGTCGAACAGCGCAGTGCCCACCCTGGCCGATGGGCAGCTGTTCGCCCAGTTGATTCAGCCCGTTCATTCAGGTGGCGATCAATCCGGTTTTGGCGGCAGCGGCGTTGCATCGTTTCAGGCTCGGCCCGATGGCATGGCGGGAGAGCTGGTCGATGAGCTGACGCAGCGTCTACCCAGCCTGCCGAGCGGCCCGATCAACGTCACCCTGTTGATGCCGAACCTGGGCCGGGTACAGGTGCGCGCGGGCAAGCGCGACCAGCAACTGGAAGTGGAGCTGGGCTTCGAGCGGCAGGATGTGCTGGAGCGTCTGCGCGCGCAGGAACGCACCTGTGAAAGCGCGTTGGGCGAAGCGCTTGGTCAGCCTGTGCGCTTATGGATGCGTGAAGAGGCGAGCGTATGA MKTEHAARPQLMQTLQQGAAPQGNLAALKETGWSRRSDFESSLSSWSNSAVPTLADGQLFAQLIQPVHSGGDQSGFGGSGVASFQARPDGMAGELVDELTQRLPSLPSGPINVTLLMPNLGRVQVRAGKRDQQLEVELGFERQDVLERLRAQERTCESALGEALGQPVRLWMREEASV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0044 CDS 42670 43386 + hypothetical protein YP_001185550.1 146305085 5106718 Bacterial secretion system [KEGG] Cytoplasmic Membrane[Class 3] ATGACGCCGCTGGCCCTGGGCGCGATCTCCAGCGTATTGGCCCAGGCCTCACGTGCGCTGGGTGCCGGCGTCACACTCAACTTCCGGGCCCGTGGTCATGACGGCGAGCTGAAACTGCTGCCCATGCTCCCTAATGCGCCGTCGCGGGCCGGAACCTGGCTGCATACGAATGTCGGGCCGCTGTGTCTGGGCGACGCTGGGGCGGTGTTGAGTCTGCTGGGTGAGCTGCCGGTTACGTGCGAAGGCGATGACCAGCCCTGGTACTGGCAACTGATCAGTCAGCGCCTCAGTCAGGGTGTTGCGGGTGCCTTGGGGGCGATCAGCCCTTTGGACGGGGATGCTCCAGCGGGCGCGCTGCTGCATGCCCAACTGCACGTTCGCCTGGGCGATGAACGAGTGCAGGCTCAACTCGCCGCACCACCGGAAACCTGGCTGAACTGGCTGCAGGCGCCTGAATGGCAACGCATCAGGACAGCGCTGCACGAGGCTCTGGTGTTGCACATTCCTCTGCAACTGGGGCAGCTGGAGCTCAGCGCCGAGCAATTGGCCTCACTGCAACCCGGCGACATCGTGCTGCCTGCCCAGGCCAGCTTCACCTGCGACGGCAGCGGTCATCTGGCATTGGCCAGCCGGTATTGGGCGGCCCAGGTGAGCAGTCGTGGCGAAAAACTCTTCCTGAATCTGCGTCACGAGGAAAGCAGCCAGCATGAGCACTGA MTPLALGAISSVLAQASRALGAGVTLNFRARGHDGELKLLPMLPNAPSRAGTWLHTNVGPLCLGDAGAVLSLLGELPVTCEGDDQPWYWQLISQRLSQGVAGALGAISPLDGDAPAGALLHAQLHVRLGDERVQAQLAAPPETWLNWLQAPEWQRIRTALHEALVLHIPLQLGQLELSAEQLASLQPGDIVLPAQASFTCDGSGHLALASRYWAAQVSSRGEKLFLNLRHEESSQHEH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0045 CDS 43376 43777 + surface presentation of antigens (SPOA) protein YP_001185551.1 146305086 5106719 PFAM: surface presentation of antigens (SPOA) protein Bacterial secretion system [KEGG] Cytoplasmic[Class 3] PF01052|SpoA, Surface presentation of antigens (SPOA)|61|131|6e-13 COG1886|FliN, Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]. ATGAGCACTGAACATCTATCCCAGGAAAGCTTGCAGGAGATGGCGGAAATGGATGCTGATGCGCTGCCTGAGGGTTTCGAGGAACGACCTGGCGAAATGCATCTGGAAGGTCAGGAGTTCGCGCCGCAGGACGAGCACGCGAGTGCCGTCGAGCCCCAGCAGATGGCGGCGCTTGGCAGCATCGCGCATTTGCCGCTGCAGCTTACCCTGCGCTGCGGCCAGTTGACCTTGAGCGTCGATCAACTGCGGCAGCTGGGCAGCGGCAGCGTTCTCGAGATCCATGGGGTCGCCCCTGGCCATGCCACCCTTTGCCATGGTGAGCGTGTGGTGGGTGAGGGAGAGTTGGTGGATGTCGATGGGCGGCTGGGTCTGCAGATCACCCGGATGGCGACGCTGTCATGA MSTEHLSQESLQEMAEMDADALPEGFEERPGEMHLEGQEFAPQDEHASAVEPQQMAALGSIAHLPLQLTLRCGQLTLSVDQLRQLGSGSVLEIHGVAPGHATLCHGERVVGEGELVDVDGRLGLQITRMATLS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0046 CDS 43774 44427 + type III secretion system protein YP_001185552.1 146305087 5106720 TIGRFAM: Yop virulence translocation RPFAM: type III secretion system inner membrane P protein ; part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response Bacterial secretion system [KEGG] Flagellar[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0030254|protein secretion by the type III secretion system|IEA ; cellular_component|GO:0030257|type III protein secretion system complex|IEA TIGR01102|yscR|type III secretion apparatus protein, YscR/HrcR family|equivalog|1.7e-129||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00813|FliP, FliP family|14|213|4e-61 COG4790|EscR, Type III secretory pathway, component EscR [Intracellular trafficking and secretion]. ATGATTCTGGACGGAATGAACCCCATCATGCTGGCGCTGTTCCTTGGCGCCCTGTCGTTGATTCCCTTCCTGCTCATCGTCTGCACGGCATTTCTCAAGATCGCCATGACGCTGATGATCACCCGTAACGCCATTGGCGTGCAGCAGGTTCCACCGAACATGGCGATCTACGGTATCGCCCTGGCGGCGACCATGTTCGTGATGGCGCCGGTTGCCTACGAAATCCAGAACCGACTCAGTGACAACCCCCTGGACCTGTCGTCCACGGACAGTCTCCAGGCCAGTGCCGGCAACGTGGTGGAGCCGTTGCAGGACTTCATGGTGAACAACACCGACCCGGACATCGCCACGCATCTTCTGGAAAACACCCAGCGCATGTGGCCCAGGGAAATGTCCGAGAAGGCCAGCAAAAGCGACCTGCTGCTGGCGATTCCGGCGTTCGTGCTGTCCGAGCTGCAGGCTGCGTTTCAGATCGGTTTTCTGATCTACATCCCGTTCATCGTGATCGACCTGATCATTTCCAATCTGCTGCTGGCGCTGGGCATGCAGATGGTGTCGCCGATGACCATCTCGCTGCCGCTGAAGCTGTTGCTGTTCGTCCTGGTGGACGGCTGGACGCGGCTGCTCAACAGCCTCTTCTACTCCTATATGTGA MILDGMNPIMLALFLGALSLIPFLLIVCTAFLKIAMTLMITRNAIGVQQVPPNMAIYGIALAATMFVMAPVAYEIQNRLSDNPLDLSSTDSLQASAGNVVEPLQDFMVNNTDPDIATHLLENTQRMWPREMSEKASKSDLLLAIPAFVLSELQAAFQIGFLIYIPFIVIDLIISNLLLALGMQMVSPMTISLPLKLLLFVLVDGWTRLLNSLFYSYM Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0047 CDS 44435 44698 + HrpO family type III secretion protein YP_001185553.1 146305088 5106721 TIGRFAM: type III secretion protein, HrpO familyPFAM: export protein FliQ, family 3 ; TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ, family 3 Bacterial secretion system [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR01403|fliQ_rel_III|type III secretion protein, HrpO family|subfamily|8e-33||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01313|Bac_export_3, Bacterial export proteins, family 3|1|76|9e-15 COG4794|EscS, Type III secretory pathway, component EscS [Intracellular trafficking and secretion]. ATGGAGGCGTTGGCGCTGTTCAAGCAAGGCATGTTCCTGGTGGTTATCCTGACTGCACCGCCATTGGCCGTGGCGGTGCTGGTCGGGGTGACGACATCGCTGGTACAGGCGCTGATGCAGATGCAGGATCAGACGCTGCCGTTCGGTTTGAAACTGGCTGCCGTCGGCCTGACCCTGGCGATGACCGGACGCTGGATCGGCCTGGAGTTGATTCAGTTCACCAATATGGCGTTCGACCTGATTGCCCGCTCAGGGGGCAATTAG MEALALFKQGMFLVVILTAPPLAVAVLVGVTTSLVQALMQMQDQTLPFGLKLAAVGLTLAMTGRWIGLELIQFTNMAFDLIARSGGN Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0048 CDS 44699 45499 + type III secretion protein SpaR/YscT/HrcT YP_001185554.1 146305089 5106722 TIGRFAM: type III secretion protein SpaR/YscT/HrcTPFAM: type III secretion system inner membrane R protein ; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein Bacterial secretion system [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR01401|fliR_like_III|type III secretion apparatus protein SpaR/YscT/HrcT|equivalog|7.6e-94||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01311|Bac_export_1, Bacterial export proteins, family 1|6|255|1e-49 COG4791|EscT, Type III secretory pathway, component EscT [Intracellular trafficking and secretion]. ATGCCATTGGATGCCCAGGCCGCTTTCGAGCTGATGCTGGGGCTAGGTCTCGGCGTGGCCCGCCTGCTGCCCTGCATGCTGCTGGTGCCTGCATTCTGTTTCAAACACCTCAAAGGCATTCTGCGTTATGGCGTGGTGATCGCCGTGGCGATGATCCCGGCCCCTTCGATCGGCGAGGCCCTGGCCAGTGAGGGGGCCAGTTTCGGCGTGGTCATGGGGCTGCTGATCAAGGAGGTCATGCTCGGTGCGCTGCTTGGCGTGTTGCTGCACATGCCGTTCTGGATGTTCGCCTCGGTCGGCGCTTTGCTCGACAGTCAGCGTGGTGCTCTCAGTGGTGGTCAGCTCAACCCGGCGCTCGGCCCGGACGTGACGCCGATGGGCGAGCTGCTGCAGGAAGTGCTGGTAATGCTGGTCATTCTGTTCGGCGGGTTACCTTTGATTACCCAGGTGATCTGGGACAGCTACTTGATCTGGCCGCCCACGGTCTGGCTGCCGATCCTGACCGAGGACGGCCTGGGCGTGCTGCTCTCGCAACTCAGCCGAACGTTGCAGCACATGCTGCTCTATGCCGCGCCCTTCATTGCCCTGCTGCTGCTGATCGAGGCGGCCATGGCGATCATCAGTCTGTATGCGCAACAACTGAACGTATTCATCCTGGCAATGCCGGCCAAGAGCATTGCCGGGCTGGCTTTCTTGCTGATCTATCTGCCCACGCTTCTCGAACTGGGTGGTGGGGAGGTTCAGCAGTTTCAGCTTCTCAAGCAACTGCTGGGCAGCCTCGTCCAGGTGCCGGTGCCATGA MPLDAQAAFELMLGLGLGVARLLPCMLLVPAFCFKHLKGILRYGVVIAVAMIPAPSIGEALASEGASFGVVMGLLIKEVMLGALLGVLLHMPFWMFASVGALLDSQRGALSGGQLNPALGPDVTPMGELLQEVLVMLVILFGGLPLITQVIWDSYLIWPPTVWLPILTEDGLGVLLSQLSRTLQHMLLYAAPFIALLLLIEAAMAIISLYAQQLNVFILAMPAKSIAGLAFLLIYLPTLLELGGGEVQQFQLLKQLLGSLVQVPVP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0049 CDS 45496 46575 + YscU/HrpY family type III secretion protein YP_001185555.1 146305090 5106723 TIGRFAM: type III secretion protein, YscU/HrpY familyPFAM: type III secretion exporter ; TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter Bacterial secretion system [KEGG] T3SS[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0030254|protein secretion by the type III secretion system|IEA TIGR01404|FlhB_rel_III|type III secretion protein, YscU/HrpY family|subfamily|1.7e-161||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF01312|Bac_export_2, FlhB HrpN YscU SpaS Family|3|342|1e-109 COG1377|FlhB, Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]. ATGAGCGAAAAAACGGAGAAGGCGACGCCCAAGCAACTGCGTGATGCGCGGGAAAAGGGGCAGATTGCGCAGAGTCAGGACGTCAGCAAGCTGTTGATCCTGCTGATGGTCAGCGAAATCACCTGGAGCCTGGCCACGGAGAGCGTACAACGCCTGCAGCACCTGATGGCGCTTGCCATCAATGCGACCGGGCAGCCGTTTCTGCGGATTGTGGGGCAACTGGTCGACGAGGCCGTGACCGTATTGCTCGGCTTCCTGATCTTCAGTGTCGGTGTCGCCATGGTGATGCGTCTGGCCGGAGGCTGGGCTCAGTTCGGGTTTCTCTTCGCACCCAAGGCACTGAAGATCGATTTCAACAAGCTCAATCCGTTTCCCCAGCTCAAGCAGATGTTCTCTGCGCAGAACCTAACCAACTTGCTGATGAGCATCCTCAAGGCTGCAGTCATCGGCATCACGCTCTACGTTCTGCTCTGGCCAGAGCTGGGTACATTGATCCTGCTGGCCAACTCCGACCTGGATACCTACTGGCAATCGTTGATGGAGGTGTTTCGCTACATCCTGCGCTGCACCCTGGGTCTACTCCTGGTGCTGGCTGCAGTGGATTTCGGCCTGCAGAAATACTTCCATGCCAAGAAACTGCGCATGAGCAAGGATGACGTGAAGAAGGAGTACAAGCAGTCGGAGGGCGACCCGATGGTGAAGGGGCAGCGACGCCAACTGGCGCACGAACTGCTCAATCAGCCGCCTTCGACCGCGGCAAGGCCAGTGGAGGAGGCCGATATGCTGGTGGTTAACCCGACCCACTATGCCGTGGCCCTGTACTACCGTCCGGGCAAGACACCCTTGCCGATGATTCACTGCAAGGGCGAGGACGAAGACGCATTGGCCCTGATCGCGCGGGCCAAGAAAGCCAGGATTCCCGTGGTGCAGAGCGTCTGGCTCGCGCGCACCCTGTACAAGGTCAATGCAGGACGCCATATCCCCCGTCCGACCCTGGAGGCTGTCGCCCACATCTATCAGTTGGTGAAACAGCTGGACGAGGTGACCGACGAAATCATCCAGGCCGACTCCGGGCTCTGA MSEKTEKATPKQLRDAREKGQIAQSQDVSKLLILLMVSEITWSLATESVQRLQHLMALAINATGQPFLRIVGQLVDEAVTVLLGFLIFSVGVAMVMRLAGGWAQFGFLFAPKALKIDFNKLNPFPQLKQMFSAQNLTNLLMSILKAAVIGITLYVLLWPELGTLILLANSDLDTYWQSLMEVFRYILRCTLGLLLVLAAVDFGLQKYFHAKKLRMSKDDVKKEYKQSEGDPMVKGQRRQLAHELLNQPPSTAARPVEEADMLVVNPTHYAVALYYRPGKTPLPMIHCKGEDEDALALIARAKKARIPVVQSVWLARTLYKVNAGRHIPRPTLEAVAHIYQLVKQLDEVTDEIIQADSGL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0050 CDS 46762 47412 + hypothetical protein YP_001185556.1 146305091 5106724 TIGRFAM: conserved hypothetical integral membrane proteinPFAM: protein of unknown function DUF165 ; TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165 Cytoplasmic Membrane[Class 3] TIGR00697|TIGR00697|conserved hypothetical integral membrane protein|subfamily|1.3e-52||Hypothetical proteins|Conserved PF02592|DUF165, Uncharacterized ACR, YhhQ family COG1738|43|186|5e-28 COG1738|COG1738, Uncharacterized conserved protein [Function unknown]. ATGACCCTGATTCCTGCGTCGGTCAGTCGGCCCGTGCTGGCCGGCCTGATCGCCTTCCATATCCTCATCATCATCGCCAGCAACTACCTGGTGCAGCTGCCGATCACCCTGTTCGGCTGGCATACCACCTGGGGTGCGTTCAGCTTCCCGTTCATCTTCCTGGCTACCGACCTCACCGTGCGTCTGATCGGCAAGCATGCCGCGCGGGTGGTGATCGCCCGCGTCATGCTGCCGGCGCTGGTCGCCTCCTACGTGGTGTCGGTGCTGTTCCATGAAGGCGTCTTCGGCGGCCTGGCGGTGCTGGGCGACTTCAACCTGTTCGTCTTCCGTATCGCCGTGGCCAGCTTCCTGGCCTATGCCTTCGGCCAGTTGCTCGATATCCAGGTGTTCGACCGCCTGCGCCAGATGCGCCAGTGGTGGATCGCGCCGACGGCCTCGACCATCTTCGGCAACCTGCTCGATACCTTCCTGTTCTTCTCGGTGGCCTTCTGGCGCAGCGACGATCCGTTCATGGCGGCCAACTGGGTGGAGATCGCCACGGTGGACTACGTGATCAAGCTGGCCATCAGCCTGATGCTCTTCGTACCGCTGTACGGCATGCTGCTCAGCGCCATCGTCCGCGCCCTGCCCCAGCGCCCGGCCACGGCCTGA MTLIPASVSRPVLAGLIAFHILIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLIGKHAARVVIARVMLPALVASYVVSVLFHEGVFGGLAVLGDFNLFVFRIAVASFLAYAFGQLLDIQVFDRLRQMRQWWIAPTASTIFGNLLDTFLFFSVAFWRSDDPFMAANWVEIATVDYVIKLAISLMLFVPLYGMLLSAIVRALPQRPATA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0051 CDS 47452 47766 - TPR repeat-containing protein YP_001185557.1 146305092 5106725 PFAM: TPR repeat-containing protein ; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein Unknown[Class 3] COG3063|PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]. ATGAGCACAGAAGCACTGGAAAAGATGCTGGCCAAGGGCATGGACAACGCCCTGCTGCGCTTCGGCCTGGGCAAGGCCCACCTGGATGCCGGCAACGCCGCCCAGGCTGCCGAGCACCTGCAACGCTGCGTGGAGTTCGACCCCGGCTATTCCGCTGCCTGGAAACTGCTGGGCAAGGCGCTGCAGGCCGAAGGCGACATCGAGGCAGCGCGCCGGGCCTGGCAGCAGGGCCTCAATGCCGCCCAGAGCAAGGGCGACAAGCAGGCCGAGAAGGAAATGAGCGTGTTTCTGCGCAAGCTGGACAAGGTGCGCTGA MSTEALEKMLAKGMDNALLRFGLGKAHLDAGNAAQAAEHLQRCVEFDPGYSAAWKLLGKALQAEGDIEAARRAWQQGLNAAQSKGDKQAEKEMSVFLRKLDKVR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0052 CDS 47855 49228 - trkA potassium transporter peripheral membrane component YP_001185558.1 146305093 5106237 PFAM: TrkA-N domain protein ; involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain Cytoplasmic Membrane[Class 3] PF02254|TrkA_N, TrkA-N domain|234|349|1e-20 ; PF02080|TrkA_C, TrkA-C domain|154|225|3e-09 COG0569|TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. GTGAAGATCATCATTCTCGGTGCCGGCCAGGTCGGCGGCACCCTGGCGGAGCACCTGGCCAGCGAGGCCAACGACATCACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTGGGCGACCGCCTCGACATCCGCACCGTACAGGGCAAGGGTTCCTTTCCCACCGTGCTGCGCCAGGCCGGCGCCGACGATGCCGACATGCTGGTGGCCGTGACCAACAGCGACGAAGTCAACATGATCGCCTGCCAGGTGGCCTACACCCTGTTCCACACCCCGACCAAGATCGCCCGGGTGCGCGAGTCGGCCTACCTGACCCGCGAGGCACTGTTCGACAACGAAGCGATACCGGTGGACGTGCTGATCAGCCCCGAGCAGGTGGTGACCAACTACATCAAGCGCCTGATCGAATACCCCGGCGCCCTGCAGGTGATCGACTTCGCCGACGGCAAGGCGCAGCTGGTCGCGGTCAAGGCCTACTACGGCGGTCCGCTGGTGGGCCAGCAACTGCGCCAGCTGCGCCAGCACATGCCCAACGTCGACACCCGGGTGGCCGCGATCTTCCGCCGCAACCGGCCGATCATGCCGCAGGGCGACACGGTGATCGAAGCCGATGACGAGGTGTTCTTCATCGCTGCCAAGGCCCACATCCGTGCAGTGATGAGCGAGATGCGCCGTCTCGAGGACAGCTACAAGCGCGTGGTGATCGCCGGCGGCGGCAATATCGGCGAGCGCCTGGCCGAAGCCATCGAGAGCCGCTATCAGGTGAAGATCATCGAGATGAACCCGGCGCGCTGCCGCTACCTGTCGGAGAACCTCGACAGCGCCATCGTGCTGCAGGGCAGCGCCTCGGATCGCGACCTGCTGGTGGAAGAGAACATCAACGACGCCGACATCTTCCTCGCCCTGACCAACGACGACGAGGCCAACATCATGTCGTCCTTGCTGGCCAAGCGCCTGGGCGCGCGCAAGGTGATGACCATCATCAACAACCCGGCCTACGTCGACCTGGTGCAGGGCGGCGAGATCGACATCGCCATCAGCCCGCAGCTGGCCACCATCGGCACCCTGCTGACCCACGTGCGCCGCGGCGATATCGAAAGCGTGCACAGCCTGCGCCGCGGCGCCGCCGAGGCCCTGGAGGTGATCGCCCACGGCGATGCCAAATCGAGCAAGGTCATCGGTCGCATGATCGAGGAAATCGCCCTGCCGCCGAGCACCACCATCGGCGCCATCATCCGCGACGAGGAAGTGCTGATCGCCCACGACGACACGGTGATCGAGTCCGGCGACCACGTGATCCTGTTCCTGGTCGACAAGAAGTACATCCGCGACGTCGAGCGCCTGTTCCAGGCCGGCCTGACGTTCTTCTGA MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGKGSFPTVLRQAGADDADMLVAVTNSDEVNMIACQVAYTLFHTPTKIARVRESAYLTREALFDNEAIPVDVLISPEQVVTNYIKRLIEYPGALQVIDFADGKAQLVAVKAYYGGPLVGQQLRQLRQHMPNVDTRVAAIFRRNRPIMPQGDTVIEADDEVFFIAAKAHIRAVMSEMRRLEDSYKRVVIAGGGNIGERLAEAIESRYQVKIIEMNPARCRYLSENLDSAIVLQGSASDRDLLVEENINDADIFLALTNDDEANIMSSLLAKRLGARKVMTIINNPAYVDLVQGGEIDIAISPQLATIGTLLTHVRRGDIESVHSLRRGAAEALEVIAHGDAKSSKVIGRMIEEIALPPSTTIGAIIRDEEVLIAHDDTVIESGDHVILFLVDKKYIRDVERLFQAGLTFF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0053 CDS 49240 50553 - sun protein YP_001185559.1 146305094 5106238 TIGRFAM: sun proteinPFAM: Fmu (Sun) domain protein ; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 Cytoplasmic[Class 3] biological_process|GO:0000154|rRNA modification|IEA ; molecular_function|GO:0016434|rRNA (cytosine) methyltransferase activity|IEA TIGR00563|rsmB|ribosomal RNA small subunit methyltransferase B|equivalog|1.8e-139|2.1.1.-|Protein synthesis|tRNA and rRNA base modification PF01189|Nol1_Nop2_Fmu, NOL1/NOP2/sun family|161|429|4e-66 ; PF01029|NusB, NusB family|1|125|2e-20 COG0144|Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ATGAATCCACGTCTGGCTGCGGCGCGTGCCCTGACCGCCGTGCTGTCCGGCAAGGCCTCGCTGGGCAGCAGCCTGCCGCCGCAACTGGACAAGGTCGAACACCACGACCGCGCCCTGGCGCAGGACCTGGCCTTCGGCGCCGCACGCTGGCAACCGCGCCTGCAACTGCTGGCCGACAAGCTGCTGGAAAAGCCCTTCAAGGCCGCCGACAAGGATGTCGAGGCGCTGCTGCTGATCGGTCTCTATCAGTTGCTGCACAGCCGCATCCCCGAGCACGCCGCCATCGGCGAGACGGTCGGCTGCGCCGGCGCGCTGAAAAAGCCCTGGGCCAAGGGCCTGCTCAACGCCGTGTTGCGCCGCGCCCAACGCGAGCACGAAGCCCTGTTCGCAGAGCTGGATCGCGACCCGGTGCTGCACACCGCGCATCCACGCTGGCTGCAAAAACAGCTCAAGTCCTTCTGGCCAGAGTATTGGCAGGCCATCTGCGCCGCCAACAACGCCCATCCGCCGCTGATCCTGCGGGTCAATCGCCGCCATGGCAGCCGCGACGCCTACCTCGAGGAGCTGCGCGGCGCCGGCTTTGCCGCCGAACCTTGCACTTTCAGCCGCGACGGCGTGCGCCTGCTGCAGCCCTGCGACGTGACCGCACTGCCCGGCTTCCGGGAAGGCCGCGTCAGCGTGCAGGACGAGGCCGCGCAACTGGCCGCCGACCTGCTCGAGCTGGCCCCGGGTCAACGGGTGCTGGACGCCTGCGCCGCGCCCGGCGGCAAGACCTGCCACCTGCTGGAAGCCGAACCGGCGCTGGCCGAAGTGATCGCGGTGGATCTGGAAGAAAAGCGCCTGACCCGTGTACGCGAGAATCTCCAGCGCCTCGGCCTGGAGGCGCGCCTGATCGCCGCCGACGGCCGTGCGACCAAGGTCTGGTGGGACGGCACGCCATTCCAGCGCATCCTCCTCGATGCACCCTGCTCGGCTACCGGGGTGATCCGCCGTCATCCGGATATCAAGCTGACGCGCAAATCCGAAGACATCCCCGCCCTGGCGCAACTTCAAGGCGAGCTGCTCGATGCGCTGTGGCCGACCCTGGCGCCCGGCGGCATCCTGCTCTACGCCACCTGCTCGGTACTGCCGACGGAAAACAGCGACACCATCGCCGCCTTCCTCGCCCGTACGCCCGACGCGCAGGAGGTCGCCATCGGTGGAGACTTCGGTCTGCAAGCGGCGCACGGTCGCCAGCTGCTGCCACAGCTGGACGGCCATGACGGCTTCTACTATGCCAAGCTGATAAAGAGCGCTGTGCCCAGCCACAGCTAA MNPRLAAARALTAVLSGKASLGSSLPPQLDKVEHHDRALAQDLAFGAARWQPRLQLLADKLLEKPFKAADKDVEALLLIGLYQLLHSRIPEHAAIGETVGCAGALKKPWAKGLLNAVLRRAQREHEALFAELDRDPVLHTAHPRWLQKQLKSFWPEYWQAICAANNAHPPLILRVNRRHGSRDAYLEELRGAGFAAEPCTFSRDGVRLLQPCDVTALPGFREGRVSVQDEAAQLAADLLELAPGQRVLDACAAPGGKTCHLLEAEPALAEVIAVDLEEKRLTRVRENLQRLGLEARLIAADGRATKVWWDGTPFQRILLDAPCSATGVIRRHPDIKLTRKSEDIPALAQLQGELLDALWPTLAPGGILLYATCSVLPTENSDTIAAFLARTPDAQEVAIGGDFGLQAAHGRQLLPQLDGHDGFYYAKLIKSAVPSHS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0054 CDS 50550 51494 - fmt methionyl-tRNA formyltransferase YP_001185560.1 146305095 5106239 TIGRFAM: methionyl-tRNA formyltransferasePFAM: formyl transferase domain protein ; modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth One carbon pool by folate [KEGG] ; Aminoacyl-tRNA biosynthesis [KEGG] 2.1.2.9 Cytoplasmic[Class 3] biological_process|GO:0006431|methionyl-tRNA aminoacylation|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0004479|methionyl-tRNA formyltransferase activity|IEA TIGR00460|fmt|methionyl-tRNA formyltransferase|equivalog|1.4e-124|2.1.2.9|Protein synthesis|tRNA aminoacylation PF02911|Formyl_trans_C, Formyl transferase, C-terminal domain|207|303|4e-28 ; PF00551|Formyl_trans_N, Formyl transferase|5|184|5e-45 COG0223|Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ATGCCTGACTCATTGCGTATCGTCTTTGCCGGCACCCCGGAATTCGCCGCCGAACACCTCAAGGCCCTGCTGGCCAGCCAGCACGAGGTCATCGCCGTCTACACCCAGCCGGATCGTCCGGCCGGCCGTGGCCAGAAGCTGATGCCAAGCCCGGTCAAGCAGCTCGCCGTGGAACACGGCATTCCGGTCCATCAGCCGGCCAGTCTGCGCAATGAAGAGGCTCAGGCCGAGCTGGCGGCGCTCAAGCCAGACCTGATGGTGGTGGTCGCCTACGGCCTGATCCTGCCGCAGGTGGTGCTCGACACGCCGCGCCTGGGCTGCATCAACAGCCACGCCTCGCTGCTGCCACGCTGGCGCGGCGCGGCGCCGATCCAGCGCGCGGTGCAGGCCGGCGACCTCGAGTCCGGCGTCACCGTGATGCAGATGGAAGCGGGCCTGGACACCGGGCCGATGCTGCTCAAGGTCAGCACGCCGATCTCGGCAGAAGACACCGGCGGCAGCCTGCATGACCGTCTCGCCCGGCTCGGCCCGCAGGCGGTGCTGCAGGCCATCGACGGCCTGGCCGCCGGCACCCTGATCGGCGAACTACAGGACGACGCCCAGGCCAACTACGCGCACAAGCTGAACAAGGACGAGGCGCGCCTCGACTTCAGCCGCCCGGCCGTCGAGCTGGAACGCCTGATTCGCGCCTTTCACCCCTGGCCAATCTGCCACACCACGCTGAACGGTGATGCGCTGAAAGTGCATGCCGCCGAACTCGGTGAGGGCAGCGGCGCACCGGGCACCATCCTCGCCGCGGACAAGAACGGCCTGACCGTGGCCTGCGGCGAAGGCGCGCTGCGCCTGACTCGCCTGCAGCTGCCAGGCGGCAAACCGCTGGCCTTCAGCGATCTGTACAACAGCCGCCGCGAGCAGTTCGCGCCCGGCCTGGTACTCGGTCAATGA MPDSLRIVFAGTPEFAAEHLKALLASQHEVIAVYTQPDRPAGRGQKLMPSPVKQLAVEHGIPVHQPASLRNEEAQAELAALKPDLMVVVAYGLILPQVVLDTPRLGCINSHASLLPRWRGAAPIQRAVQAGDLESGVTVMQMEAGLDTGPMLLKVSTPISAEDTGGSLHDRLARLGPQAVLQAIDGLAAGTLIGELQDDAQANYAHKLNKDEARLDFSRPAVELERLIRAFHPWPICHTTLNGDALKVHAAELGEGSGAPGTILAADKNGLTVACGEGALRLTRLQLPGGKPLAFSDLYNSRREQFAPGLVLGQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0055 CDS 51547 52053 - def peptide deformylase YP_001185561.1 146305096 5106240 TIGRFAM: peptide deformylasePFAM: formylmethionine deformylase ; cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) 3.5.1.88 Cytoplasmic[Class 3] biological_process|GO:0006464|protein modification process|IEA ; molecular_function|GO:0042586|peptide deformylase activity|IEA TIGR00079|pept_deformyl|peptide deformylase|equivalog|6.5e-77|3.5.1.88|Protein fate|Protein modification and repair PF01327|Pep_deformylase, Polypeptide deformylase|3|153|3e-51 COG0242|Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ATGGCGATCCTGAATATCCTCGAATTTCCTGATCCACGCCTGCGTACCATCGCCAAACCGGTGGACGTCGTGGACGACTCCATCCGTCAGCTGGTCGACGACATGTTCGAGACCATGTATGACGCACCCGGTATCGGCCTGGCCGCGACGCAGGTCAACGTGCACAAGCGCGTGGTGGTCATGGATTTATCCGAGGACAAGTCCGAACCGCGGGTGTTCATCAATCCCGAGTTCGAATCGCTGACCGATGAGATGGACCAGTATCAGGAAGGCTGCCTGTCGGTGCCCGGCTTCTACGAGAACGTCGATCGCCCGCAGAAGGTCAAGATCAAGGCGCTGGACCGCGATGGCCAGCCCTTCGAACTGATCGCCGAAGGCCTGCTCGCCGTGTGCATCCAGCACGAATGCGATCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCAACCTCAAGCGCGACCGGATTAAGAAGAAGCTGGAAAAACAGCATCGCCAACGCGCTTGA MAILNILEFPDPRLRTIAKPVDVVDDSIRQLVDDMFETMYDAPGIGLAATQVNVHKRVVVMDLSEDKSEPRVFINPEFESLTDEMDQYQEGCLSVPGFYENVDRPQKVKIKALDRDGQPFELIAEGLLAVCIQHECDHLNGKLFVDYLSNLKRDRIKKKLEKQHRQRA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0056 CDS 52207 53244 + Peptidoglycan-binding LysM YP_001185562.1 146305097 5106241 PFAM: Peptidoglycan-binding LysM Unknown[Class 3] biological_process|GO:0030436|asexual sporulation|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR02899|spore_safA|spore coat assembly protein SafA|subfamily_domain|2.2e-08||Cellular processes|Sporulation and germination COG1652|XkdP, Uncharacterized protein containing LysM domain [Function unknown]. ATGAGGAAATCACTACTCGCCCTGCTCTTTGCAGCTGGCGGACTGGCCCTGACCAGCTTGGCTCAGGCCGAAGTGCAACTCAAGGACGGTCACCCGGACCGCTACACCGTGGTCAAGGGCGATACCCTCTGGGACATTTCCGGCAAGTTCCTGCGTCAGCCGTGGAAGTGGCCGGAGATCTGGCACGCCAACCCACAGGTGGCCAACCCGCATCTGATCTACCCTGGGGACACTCTCAATCTGGTCTATGTCGACGGCCAGCCACGCCTGATGCTCAACCGCGGCGAGTCGCGCGGTACCATCAAGCTGTCGCCGCAGGTGCGCAGCACGCCGATGGCCGAGGCGATCCCGACCATTCCGCTGGAGGCGATCAACAGCTTCCTGCTGAGCAACCGCATCGTCGATACCCCGGAAGAGTTCAACGGCAAGCCCTACATCGTCGCCGGCAACGCCGAGCGTGTGGTCAGTGGCGCCGGTGACCGCGTCTACGCTCGCGGCCAGTTCGACGAACAGCATCCGATCTACGGCATCTTCCGTCAGGGCAAGACCTACGTGGATCCGGAAACCAAGGAATTCCTCGGCATCAACGCCGATGACATCGGCTCCGGCGAGATCGTCGCCGAGGAAGGCGATGTCGGGACCCTGCTGCTGAAGCGCTCGACTCAGGAAGTACGCCTGGGTGACCGCCTGTTCCCCACCGAAGAGCGGGCGATCAACTCCACCTTCATGCCCAGCGAGCCGGCGGGCGAGATCAAGGGTCTGATCCTCGACGTGCCGCGTGGTGTGAGCCAGATCGGACAGTTCGACGTGGTCACCTTGAACAAGGGCGCGCGCGACGGCCTGGAAATCGGCAACGTGCTGGCGGTGTACAAGACCGGCGAGACCGTACGCGACCGCGTCACTGGCGAGAGCGTGAAGATTCCGGATGAACGCTCCGGTCTGCTGATGGTGTTCCGCACCTACGACAAGCTCAGCTACGGCCTGGTGCTGCAGGCCAGCCGGCAGCTGGCGGTGATGGACAAGGTCCGCAACCCGTAA MRKSLLALLFAAGGLALTSLAQAEVQLKDGHPDRYTVVKGDTLWDISGKFLRQPWKWPEIWHANPQVANPHLIYPGDTLNLVYVDGQPRLMLNRGESRGTIKLSPQVRSTPMAEAIPTIPLEAINSFLLSNRIVDTPEEFNGKPYIVAGNAERVVSGAGDRVYARGQFDEQHPIYGIFRQGKTYVDPETKEFLGINADDIGSGEIVAEEGDVGTLLLKRSTQEVRLGDRLFPTEERAINSTFMPSEPAGEIKGLILDVPRGVSQIGQFDVVTLNKGARDGLEIGNVLAVYKTGETVRDRVTGESVKIPDERSGLLMVFRTYDKLSYGLVLQASRQLAVMDKVRNP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0057 CDS 53331 54437 + DNA protecting protein DprA YP_001185563.1 146305098 5106242 TIGRFAM: DNA protecting protein DprAPFAM: SMF family protein ; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein Unknown[Class 3] biological_process|GO:0009294|DNA mediated transformation|IEA TIGR00732|dprA|DNA protecting protein DprA|equivalog|9.9e-106||Cellular processes|DNA transformation PF02481|DNA_processg_A, DNA recombination-mediator protein A|78|286|1e-65 COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ATGCCCCTACCTTCCTCGCATTCTCCCGCCGAGCTCGAAGCCCGCCTGCGCCTGCACTTGCTGCCGGAGCTCGGCCCGCGGCGCTTTCGCAAGCTGCTCAGTGCCTTTGACAGCGCTTCGGCCGCACTCAGTGCTCCGGCCAGCGCCTGGCGCTCGCTGGGCCTGCCGGCCGTGTGCGCCGAGCCGCGACGCAGTGCCGAGATCCGGCAACGCGCCGCCGCGGCTATGCACTGGCTCGACCAGACAGATCAGCACCTGCTGATGTGGGATGACCCACGCTATCCGGCCCTGCTCGCCGAGCTGGCGGATGCGCCGCCGCTGCTGTTCGTGGGCGGAGACCCGCTGCTGCTGGAGGCACCGCAACTGGCCATGGTCGGAAGCCGCCGCGCCTCTCGGCCGGGTCTGGACAATGCTCACGCCTTCGCCCGCAGCCTGGCCGCCGGCGGCTTCGTGATCACCAGCGGGTTGGCCCTGGGCATAGATGGCGCCGCGCATCAGGGCGCGCTGGATGGTGGCGGCAAGACCGTGGCGGTGCTGGGTACCGGCCTGGAGTGCCTGTATCCGGCACGGCACAAGCGGCTGGCGGCGCAGATCATCGAGCAGGGCGGTGCTCTGGTCTCCGAACTGCCGTTGGACTGTCCGCCGCAGGCGAGCAACTTCCCGCGACGCAACCGGATCATCAGCGGCCTGTCACTGGGCGTGCTGGTGGTCGAGGCCAGCCCCTCCAGCGGTTCGCTGATCACCGCGCGTCTGGCTGCCGAGCAGGGTCGCGAGGTGTACGCCATTCCCGGCTCCATCCACCATCCAGGGGCGCGCGGCTGTCACCAGCTGATTCGCGACGGCGCGACGCTGGTGGAAAGCATCGAGCATATCCTCGAGGCTCTGCGCGGTTGGCAGACGCCAAGCGGACAGCAAGCCTCGGCTGCGCAGCCCGGCGCCGAGCAGCATCCCCTGCTGACGTTGCTGCACGCCGCGCCACACAGTAGCGAGGCCTTGGCGCACAGCAGTGGCTGGCCACTCGCGCAGGTGCTGGCGGCGCTGACCGAACTGGAGCTGGACGGCCTGGTCTGCTGCGAGGCCGGGCGCTGGCTGGCGCGCGGTCCATAA MPLPSSHSPAELEARLRLHLLPELGPRRFRKLLSAFDSASAALSAPASAWRSLGLPAVCAEPRRSAEIRQRAAAAMHWLDQTDQHLLMWDDPRYPALLAELADAPPLLFVGGDPLLLEAPQLAMVGSRRASRPGLDNAHAFARSLAAGGFVITSGLALGIDGAAHQGALDGGGKTVAVLGTGLECLYPARHKRLAAQIIEQGGALVSELPLDCPPQASNFPRRNRIISGLSLGVLVVEASPSSGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGATLVESIEHILEALRGWQTPSGQQASAAQPGAEQHPLLTLLHAAPHSSEALAHSSGWPLAQVLAALTELELDGLVCCEAGRWLARGP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0058 CDS 54504 55061 + SUA5/yciO/yrdC domain-containing protein YP_001185564.1 146305099 5106243 PFAM: SUA5/yciO/yrdC, N-terminal domain Cytoplasmic[Class 3] TIGR00057|TIGR00057|Sua5/YciO/YrdC/YwlC family protein|hypoth_equivalog|5.9e-13||Unknown function|General PF01300|Sua5_yciO_yrdC, yrdC domain|17|177|7e-30 COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ATGGCCAGCAACTGGCAGGTACAGCAAGCGGCGCGGGTGGTGTGTGAAGGCGGCGTGATCGCCTACCCCACCGAAGCGGTCTGGGGTCTGGGCTGCGACCCCTGGAACGAAGTCGCCGTGGACCGCCTGCTGGCTCTCAAGGAGCGGCCCGTGCACAAGGGCCTGATTCTGGTGGCCGACGACATCGAGCAGTTCGACTTTCTCCTCGATGATCTGCCGGCGATCTGGCAGGAGCGCCTGGCCGCCAGTTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCGTCTGCCCGCATGGATCACCGGCGTGCACGACAGTGTGGCCCTGCGCGTCAGTGATCATCCGCTGGTACGTGCCCTCTGCCGGCTCACCGGACCGCTGATTTCCACCTCGGCCAATCCGGCAGGCCGCCCCGCGGCGCGCTCGCGGCTGCGCGTCGAGCAGTATTTCCCCCGGCAACTGGACAAGGTGCTGGGCGGCGCCCTGGGCGGGCGCAAGAACCCCAGCCTGATTCGCGACCTGCGCACGGGCGATGTGATTCGCTCGTCCTGA MASNWQVQQAARVVCEGGVIAYPTEAVWGLGCDPWNEVAVDRLLALKERPVHKGLILVADDIEQFDFLLDDLPAIWQERLAASWPGPNTWLVPHQDRLPAWITGVHDSVALRVSDHPLVRALCRLTGPLISTSANPAGRPAARSRLRVEQYFPRQLDKVLGGALGGRKNPSLIRDLRTGDVIRSS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0059 CDS 55173 56150 - alcohol dehydrogenase YP_001185565.1 146305100 5106244 PFAM: Alcohol dehydrogenase, zinc-binding domain protein ; PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein Cytoplasmic[Class 3] biological_process|GO:0008152|metabolic process|IEA ; molecular_function|GO:0016655|oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor|IEA TIGR02824|quinone_pig3|putative NAD(P)H quinone oxidoreductase, PIG3 family|subfamily|1.2e-19||Unknown function|Enzymes of unknown specificity PF00107|ADH_zinc_N, Zinc-binding dehydrogenase|141|281|8e-24 ; PF08240|ADH_N, Alcohol dehydrogenase GroES-like domain|28|109|3e-17 COG0604|Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. ATGGCCAAGCGTATCCAGTTCAGCCAACACGGCGGCAGCGAGGTGCTGGAGTACCGCGACTATCAGCCGGCGGCCCCCGGCCCGCGCGAAGTGCGGGTGGCCAACCGCGCCATCGGCCTGAATTTCATCGACACCTATTTCCGCAGCGGTCTGTATGCCCCGCCGGCACTGCCCTCCAGCCTGGGTACCGAAGGCGCTGGCGTAGTCGAGGCGGTGGGCAGCGAGGTGCGCAACTTCGCCGTCGGCGACCGCGTGGCCTATGCCACCGGCCCGCTCGGCGCCTACAGCGAGCTGCACGTGCTGCCGGCGGACAAGCTGGTCAGACTGCCGGAGGCCATCAGCTTCGAGCAGGCCGCGGCGGTGATGCTCAAGGGCCTGACCGTGCAGTACCTGCTGCGCCAGACCTATGAGCTCAAGGGCGGCGAGACCATTTTGTTCCATGCCGCAGCGGGCGGCGTCGGCTCCTTCGCCTGCCAGTGGGCGCGGGCGTTGGGGGTCAATCTGATCGGCACGGTCAGTTCGGCCGAGAAGGCGGCGCGGGCGAAAGAGCAGGGCGCCTGGGCGACCATCGACTACAGCCATGAGAACGTCGTGCAGCGCGTGCTGGAGCTGACCGACGGCAAGAAGTGCCCGGTGGTCTACGACGGCGTCGGCAAGGACACCTGGGAAACCTCGCTGGACTGCGTGGCGCCGCGCGGCCTGCTGGTCAGCTTCGGCAACGCCTCCGGTGCGGTCACCGGGGTCAACCTGGGCGTCCTGGCGCAGAAGGGCTCGCTGTACGTCACCCGGCCGACCCTGGCCGGCTACGCCGATACCCCCGAGCGTCTGCAGACCATGGCCGACGAGCTGTTCGGCATGATCGCCGGCGGCCAGCTGCAGGTGGAGATCAGCAACCGTTATGCGTTGAAGGACGCCGCCGCTGCGCAGGACGCGCTGAGCGCCCGGCAGACTACCGGCTCGACCATTCTGCTGCCGTGA MAKRIQFSQHGGSEVLEYRDYQPAAPGPREVRVANRAIGLNFIDTYFRSGLYAPPALPSSLGTEGAGVVEAVGSEVRNFAVGDRVAYATGPLGAYSELHVLPADKLVRLPEAISFEQAAAVMLKGLTVQYLLRQTYELKGGETILFHAAAGGVGSFACQWARALGVNLIGTVSSAEKAARAKEQGAWATIDYSHENVVQRVLELTDGKKCPVVYDGVGKDTWETSLDCVAPRGLLVSFGNASGAVTGVNLGVLAQKGSLYVTRPTLAGYADTPERLQTMADELFGMIAGGQLQVEISNRYALKDAAAAQDALSARQTTGSTILLP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0060 CDS 56295 57209 + coproporphyrinogen III oxidase YP_001185566.1 146305101 5106245 PFAM: coproporphyrinogen III oxidase ; catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis Porphyrin and chlorophyll metabolism [KEGG] ; Metabolic pathways [KEGG] 1.3.3.3 Cytoplasmic[Class 3] PF01218|Coprogen_oxidas, Coproporphyrinogen III oxidase|1|301|1e-154 COG0408|HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. GTGACTGACCGTACCGAGGCCGTGAAGGCCTATCTGCTCGACCTGCAAGATCGCATCTGCGCCGCCCTCGAGGCCGAGGACGGCCAGGCCCTGTTCCGTGAGGACGCCTGGCAGCGTCCGGCTGGCGGCGGCGGCCGCACGCGGGTGATCGAGAACGGCGCGCTGATCGAAAAGGGCGGGGTCAACTTCTCCCACGTGTTCGGCGACAGCCTGCCGCCCTCGGCCAGCGCCCATCGCCCCGAACTTGCCGGCCGCGGCTTTCAGGCCCTCGGCGTGTCGCTGGTGATCCATCCGGAAAACCCCTACGTGCCCACCTCGCACGCCAACGTGCGCTTCTTCAGCGCGGAGAAGGAAGGCGAGGAGCCAGTGTGGTGGTTCGGCGGCGGTTTCGACCTGACCCCCTACTACGCCAACGAGGAGGATTGCCGCTACTGGCATCAGGTGGCCTTCGATGCCTGCGCGCCCTTTGGCGCCGAGGTCTATCCCAGGTTCAAGGCCTGGTGCGACCGCTACTTCCACCTCAAGCACCGCGGCGAGCCGCGCGGCATTGGCGGGTTGTTCTTCGACGATCTCAACGAATGGGACTTCGACACCTGCTTCGCCTTCATGCGCGCCATCGGCGACGCCTACATCCAGGCCTACCTGCCGATCGTCCAGCGCCGCAAGCTCACCCCCTTCGGTGAGCGCGAGCGCGAGTTCCAGGCGTTCCGCCGCGGTCGCTATGTCGAGTTCAACCTGGTGTTCGACCGCGGCACCCTGTTCGGCCTGCAGTCCGGCGGGCGTACCGAGTCGATTCTGATGTCGCTGCCGCCGATGGTACGTTGGGGCTACGACTGGAAGCCCGAACCGGGCAGCGAGGAAGCGCGCCTGACCGAGTATTTCCTCACCGATCGTGACTGGCTTTCGGGGGCCTGA MTDRTEAVKAYLLDLQDRICAALEAEDGQALFREDAWQRPAGGGGRTRVIENGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPYVPTSHANVRFFSAEKEGEEPVWWFGGGFDLTPYYANEEDCRYWHQVAFDACAPFGAEVYPRFKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFMRAIGDAYIQAYLPIVQRRKLTPFGEREREFQAFRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPMVRWGYDWKPEPGSEEARLTEYFLTDRDWLSGA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0061 CDS 57317 58138 + aroE shikimate 5-dehydrogenase YP_001185567.1 146305102 5106246 TIGRFAM: shikimate 5-dehydrogenasePFAM: Shikimate/quinate 5-dehydrogenase ; AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate Phenylalanine, tyrosine and tryptophan biosynthesis [KEGG] ; Metabolic pathways [KEGG] 1.1.1.25 Cytoplasmic[Class 3] biological_process|GO:0009423|chorismate biosynthetic process|IEA ; molecular_function|GO:0004764|shikimate 5-dehydrogenase activity|IEA TIGR00507|aroE|shikimate 5-dehydrogenase|equivalog_domain|4.7e-99|1.1.1.25|Amino acid biosynthesis|Aromatic amino acid family PF08501|Shikimate_dh_N, Shikimate dehydrogenase substrate binding domain|6|87|3e-24 ; PF01488|Shikimate_DH, Shikimate / quinate 5-dehydrogenase|117|214|6e-16 COG0169|AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. ATGGACCGCTACTGCGTCTTCGGCAACCCCATCGGCCACAGCAAATCGCCGCTGATCCACCGTCTGTTCGCCGAGCAGACCGGCCAGGTGCTGACCTACGAAGCGCGGCTGGCGCCGCTGGACGATTTCATCGGTGACGCGCGCGCCTTCTTCGCCGAGGGGCTGGGCGCCAACGTCACCGTACCGTTCAAGGAAGAGGCCTTTCGCCTGGCCGACGAGCTGAGCGAGCGCGCCCGCCGCGCGGGCGCGGTGAACACCCTGAAGAAGCTGGAAGGTGGCCGCCTGCTCGGTGACAACACCGACGGTGCCGGATTGACCCGCGACCTGCAGGACAATGCCGGCTTCGCCCTGACCGGCAAGCGCATCCTCGTGCTCGGGGCCGGCGGCGCCGTGCGCGGCGTGCTCGAACCCTTCCTGGCGCAGAAGCCGGCCGTGCTGGTGATCGCCAACCGCACCGTGGCCAAGGCCGAGCAGCTGGTGCGCGAATTCGCCGACCTCGGCCCGCTGGTCGCTGCCGGTTTCGACTGGCTCGACGCGCCGGTGGACCTGATCGTCAACGGTACCTCGGCCAGCCTCGGTGGCGAGCTGCCGCCGATCGCACCGAGCCTGATCCAGCCGGGCCATACGCTTTGCTACGACATGATGTATGGCAAGGAGCCCACCGCCTTCAACCGCTGGGCCTTTGATCAGGGCGCGGCGCGCTGCCTGGACGGCCTCGGCATGCTGGTCGAGCAGGCCGCCGAAGCATTCGAGCTATGGCGCGGCGTGCGCCCGAACACCGCGCCGGTGCTGGCCGAATTGCGCCGCCAGCTGGCGGGCTGA MDRYCVFGNPIGHSKSPLIHRLFAEQTGQVLTYEARLAPLDDFIGDARAFFAEGLGANVTVPFKEEAFRLADELSERARRAGAVNTLKKLEGGRLLGDNTDGAGLTRDLQDNAGFALTGKRILVLGAGGAVRGVLEPFLAQKPAVLVIANRTVAKAEQLVREFADLGPLVAAGFDWLDAPVDLIVNGTSASLGGELPPIAPSLIQPGHTLCYDMMYGKEPTAFNRWAFDQGAARCLDGLGMLVEQAAEAFELWRGVRPNTAPVLAELRRQLAG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0062 CDS 58342 59982 - sulphate transporter YP_001185568.1 146305103 5106247 PFAM: Sulfate transporter/antisigma-factor antagonist STAS ; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter Cytoplasmic Membrane[Class 3] biological_process|GO:0008272|sulfate transport|IEA ; cellular_component|GO:0016020|membrane|IEA ; molecular_function|GO:0015116|sulfate transmembrane transporter activity|IEA TIGR00815|sulP|sulfate permease|subfamily|6.9e-92||Transport and binding proteins|Anions PF01740|STAS, STAS domain|459|539|1e-05 ; PF00916|Sulfate_transp, Sulfate transporter family|144|444|3e-55 COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ATGCGATCCGGCGCTACGCTAGGCTCCTGCGAGCTGCCCGAATCGAATCCAACCTGCCTGGCCCCAACGATGCCGCTACCCGACCTGCAGACTCTTTTGCCCTTCCTGCGCTGGCTGCCCGGCACCAGCCGCAAGACCCTCGGCAACGATCTGCTGGTCGGCCTCACCGGCGCGGTGCTGGCCCTGCCGCAGTCGCTGGCCTATGCGCTGATCGCCGGCCTGCCGGCCGAGTACGGCCTGTACGCAGCCATAGTGCCGGTGATCGTCGCCTGCCTGTGGGGCTCGTCCTGGCACCTGATCTGCGGGCCGACGGCGGCCATCTCCATCGTCCTGTTCACCAGCGTCAGCCCGCTGGCCAAAGCCGGCAGCGAGCAGTTCATCGCCCTGGTGCTGCTGCTGACCTTCCTCGCCGGGCTGTTCCAGTGGCTGCTCGGCCTGCTGCGCTTCGGCGCCCTGGTCAACTTCGTCTCGCAATCGGTGGTGCTCGGCTTCACCCTGGGCGCGGCGCTGGTCATCGCCATCGGCCAGATTCCCAATCTGCTGCGCGTGGAGATCGTCAGCCAGGCCACCGCCCTGGCCAGCCTGCTGCAGATCGGTCAGCACCTGAACGACGTGCATTGGCCAAGCCTGGCCCTGGCCGCCTTCACCCTGCTGCTCTGCCTGGCGGTACGACGCCTGTGGCCGAAGGCGCCGGCGTTGCTGCTCGGCCTGGTCGCCGGCAGCGCGCTGGTGTGGCTGCTGCCGGAACGCCTGGTCGGCGGCATCGCCCTGGTCAGCGCCTTCGAAGGCGGCCTGCCGCCCTTCACGCCGCTGCAGTTCGACCTCAACAGCCTGCTGCAGCTGCTGCCGGCGGCGGTGGCCTGCGGCATGCTCGGGCTGGTCACCAGCCTGTCCATCGCCCGCGCGCTGGCGGTCAAATCGCACCAGTTCCTCGATGCCAATCAGGAAGTGCGCGCCCAGGGGCTGTCGAACATGCTCGGGCCCTGGTTCGCCGGTTCGCTGTCGGCCGGCTCCTTCACCCGCTCGGCGCTCAACCTGCAGGCCGGCGCGCGTACGCCGCTGGCCGGGGTGTTCTCGGCGTTGCTGGTGGCGCTGTTCGCCCTGTTCGGCGCAGCGCTGCTGGCGCATATTCCGCTGCCGGTGATGGCCGCCGGCATCCTGCTGATCTGCTGGGGCCTGGTCGATCTGGCGGCGATCCGCGCCCTGCGCCGCGTCAGCCGCGCCGAGTTCGCGGTGATGCTGCTGACGCTGCTGGCCACCCTGCTGCTGGAACTGCAGACGGCAATCTACGCCGGGGTGCTGGCCTCGCTGTTCTTCTACCTCAAGCGCACCTCGCAACCGCGCGTGCGCCTGTGGCAGGACGGCGACGACGAGGTGCTGCGCATCGAGGGCTCGATCTTCTTCGGCGCCTGCCACTACATCCAGCAGCTGCTGCAGCGCAGCCGCGGCCAGCGCCTGGTGATCGACGCGCGGCATATCAACTTCATCGACTACGCCGGGGTGGAGATGCTGCACCAGGAGGCACGCCGCCTGCTGGCCGGACAGCGCAGCCTGGTGTTGCGCCAGGCCCGGCCGCAGGTGGTGGAGGAGATTCTCAAGCTCGAAGGCGCTGAACGCTGTCCGGTGCAGTTCGAGGATTGA MRSGATLGSCELPESNPTCLAPTMPLPDLQTLLPFLRWLPGTSRKTLGNDLLVGLTGAVLALPQSLAYALIAGLPAEYGLYAAIVPVIVACLWGSSWHLICGPTAAISIVLFTSVSPLAKAGSEQFIALVLLLTFLAGLFQWLLGLLRFGALVNFVSQSVVLGFTLGAALVIAIGQIPNLLRVEIVSQATALASLLQIGQHLNDVHWPSLALAAFTLLLCLAVRRLWPKAPALLLGLVAGSALVWLLPERLVGGIALVSAFEGGLPPFTPLQFDLNSLLQLLPAAVACGMLGLVTSLSIARALAVKSHQFLDANQEVRAQGLSNMLGPWFAGSLSAGSFTRSALNLQAGARTPLAGVFSALLVALFALFGAALLAHIPLPVMAAGILLICWGLVDLAAIRALRRVSRAEFAVMLLTLLATLLLELQTAIYAGVLASLFFYLKRTSQPRVRLWQDGDDEVLRIEGSIFFGACHYIQQLLQRSRGQRLVIDARHINFIDYAGVEMLHQEARRLLAGQRSLVLRQARPQVVEEILKLEGAERCPVQFED Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0063 CDS 60029 60949 - Substrate-binding region of ABC-type glycine betaine transport system YP_001185569.1 146305104 5106248 PFAM: Substrate-binding region of ABC-type glycine betaine transport system Unknown[Class 3] biological_process|GO:0015871|choline transport|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015220|choline transmembrane transporter activity|IEA TIGR03414|ABC_choline_bnd|choline ABC transporter, periplasmic binding protein|subfamily|3.5e-198||Transport and binding proteins|Amino acids, peptides and amines PF04069|OpuAC, Substrate binding domain of ABC-type glycine betaine transport system|27|278|3e-53 COG2113|ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. ATGAACCGAATCAACGCGCTGTTGCTGGCCGGAGCGCTGTCCGCCAGCGCCAACGTCTGGGCCGAGGACGCGGCCTGCGCCACGGTCAAGCTGGGCGATCCGGGCTGGAGCGACATCGCCGTGACCAACGGCATCGCCAGCTTCCTGCTCGAAGGCCTCGGCTACCAGACGCAGAGCCAGACCCTGGCGGTGCCGATCATCTACGCCGGGCTGCAGAAGGGTCAGCTCGACGTGTTCCTCGGCAACTGGATGCCGGCGCAGCAGAGCAACTACGACAAGTTCGTCGCCAGCGGCGAGGTGGACCAACTGGCGCAGAACCTCGACGGCACCGAGTACACCCTGGCGGTGCCGACCTATGCCTTTGATGCCGGTGTGAAGACCTTCGCCGACCTCGACAAGCACGCCGACAAGTTCGGCAAAAAGCTCTACGGCATCGCCTCCGGCTCGCCGGCCAACGAATCGATCAAGCAGATGATCGCCGCCGACGAGTTCGGCCTGGGCGACTGGCAACTGGTGGAGTCCAGCGAGCAGGCGATGCTGGTGCAGGTCGGCCGCGCGGTCAAACGCGAGCAGTTCGTGGTGTTCCTCGGCTGGACCCCGCACCCGATGAACGTGCAGTACGACATGAAATACCTGCGCGGCGGCGAGAAGTATTTCGGCGACAGCGGCCAGGTCAACACCCTGGCGCGCAAGGGCTATGCCCAGCAGTGCCCCAATGCCGGCAAGTTGCTGAGCAACCTCAAATTCACCCAGGAGATGGAGAACAGCATCATGGATCGGGTGCTCAGCAAGCAGGCCAGCAACGCCCAGGCGATCAAGGACTGGCTGCAGGCCAACCCGCAGGTGCTCGACGCCTGGCTGGACGGGGTCACCACCCGCGACGGCGGCGACGGCCTGGCCGCGGTCAAGGCGCGGCTTTGA MNRINALLLAGALSASANVWAEDAACATVKLGDPGWSDIAVTNGIASFLLEGLGYQTQSQTLAVPIIYAGLQKGQLDVFLGNWMPAQQSNYDKFVASGEVDQLAQNLDGTEYTLAVPTYAFDAGVKTFADLDKHADKFGKKLYGIASGSPANESIKQMIAADEFGLGDWQLVESSEQAMLVQVGRAVKREQFVVFLGWTPHPMNVQYDMKYLRGGEKYFGDSGQVNTLARKGYAQQCPNAGKLLSNLKFTQEMENSIMDRVLSKQASNAQAIKDWLQANPQVLDAWLDGVTTRDGGDGLAAVKARL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0064 CDS 60993 62501 - sulfatase YP_001185570.1 146305105 5106249 PFAM: sulfatase Cytoplasmic[Class 3] TIGR03417|chol_sulfatase|choline-sulfatase|equivalog|0|3.1.6.6|No Data|No Data PF00884|Sulfatase, Sulfatase|2|368|4e-38 COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ATGAAACGCCCGAACATCCTCTTCATCATGGCCGACCAGATGGCCGCACCGATCCTGCCGCTGCACGATGCCGCCTCGCCGGTGCAGATGCCCAACCTGATGAAACTGGCCGAACGGGCCGTGGTGTTCGACTCGGCCTACTGCAACAGCCCGCTGTGCGCGCCGTCGCGCTTCACCCTGGTCAGCGGCCGGCTGCCGTCGCAGATCGGCGCCTATGACAACGCCGCCGACTTTCCCGCCGACGTGCCCACCTACGCCCACTACCTGCGCCGCCTCGGCTACCGCACCGCGCTGTCGGGCAAGATGCACTTCTGCGGCCCGGACCAGCTGCACGGCTACGAGGAACGCCTGACCAGCGACATCTACCCGGCCGACTACGGCTGGGCGGTGAACTGGGACGAACCGGACGTGCGCGCCAGCTGGTACCACAACATGTCCTCGGTGCTGCAGGCCGGCCCCTGCGTGCGCAGCAACCAGCTGGATTTCGACGAGGAGGTGGTGTTCAAGGCCCGCCAGTACCTCTACGACCACGTGCGTCTGACGCCGGAGCAGCCGTTCTGCCTGACCGTGTCGATGACCCACCCCCATGACCCCTACACCATCCCGCGCGAATACTGGGAGCGCTACGAAGGCGTGGACATTCCCATGCCGCGCCAGCACATCGAGCAGGCCGAGCAGGACCCGCACTCGCAGCGCTTGCTCAAGGTCATCGACCTGTGGGACAAGCCGCTGCCGGCAGACAAGATCCGCGACGCCCGCCGCGCCTACTTCGGTGCCTGCAGCTATATCGACGACAACATCGGCAAGCTGCTGAAGACCCTGGAGGAATGCGGCCTGGCCGAGGACACCCTGATCGTCTTCTCCGGCGACCACGGCGACATGCTTGGCGAGCGCGGCCTCTGGTACAAGATGCACTGGTTCGAGATGGCCGCCCGTGTGCCGCTGCTGGTGCATGCGCCGCAGCGCTTCGCCGCGCACCGGGTCAGCCAGTCGGTCTCCACCCTCGATCTGCTGCCCACACTGGTGGAACTGGCCGGCGGCCGGGTCGAGGAGGGCCTGGCGCTGGAGGGCCGCTCGCTGCTGGCGCATCTGACTGGCGAAGGCGGACATGACGAGGTAATCGGCGAATATATGGCCGAAGGCACCACCAGCCCGCTGATGATGATCCGCCGCGGGCCGTGGAAATTCGTCTACTCCGAGCAGGATCCGCTGCTGCTGTTCCATCTCCAGCAGGACCCGCAGGAGCGCGAGAATCTGGCCGGCTCGGCGGACCACCAGGGCGTGCTGGCCGAGTTTCTCGCCGAGGCGCGGGCGCGCTGGGACATCCCCGCGATCCACGCCGCCACCCTGGCCAGCCAGCGCCGTCGGCGCCTGGTGGCAGAGGCCCTGAGCCAGGGCAAGCTGACCAGCTGGGACCATCAGCCCTGGGTCGACGCCAGCCAGCAGTACATGCGCAACCATATCGATCTCGACGACCTGGAACGTCGCGCCCGCTATCCACAGGTTTGA MKRPNILFIMADQMAAPILPLHDAASPVQMPNLMKLAERAVVFDSAYCNSPLCAPSRFTLVSGRLPSQIGAYDNAADFPADVPTYAHYLRRLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWAVNWDEPDVRASWYHNMSSVLQAGPCVRSNQLDFDEEVVFKARQYLYDHVRLTPEQPFCLTVSMTHPHDPYTIPREYWERYEGVDIPMPRQHIEQAEQDPHSQRLLKVIDLWDKPLPADKIRDARRAYFGACSYIDDNIGKLLKTLEECGLAEDTLIVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPQRFAAHRVSQSVSTLDLLPTLVELAGGRVEEGLALEGRSLLAHLTGEGGHDEVIGEYMAEGTTSPLMMIRRGPWKFVYSEQDPLLLFHLQQDPQERENLAGSADHQGVLAEFLAEARARWDIPAIHAATLASQRRRRLVAEALSQGKLTSWDHQPWVDASQQYMRNHIDLDDLERRARYPQV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0065 CDS 62616 63569 + LysR family transcriptional regulator YP_001185571.1 146305106 5106250 PFAM: regulatory protein, LysR ; PFAM: regulatory protein, LysR; LysR, substrate-binding Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|6.1e-168||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|92|301|1e-26 ; PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|10|68|5e-17 COG0583|LysR, Transcriptional regulator [Transcription]. ATGCGTAAAGTGCTCGATGAGATTTCCCTGGACAGCCTGCGGGTGTTCGAATCGGCCGCCCGCCTGCTGAGCTTCACCGCGGCGGCCAACGAGCAGGGCAGCAGCCAGCCGGCCATCAGCCAGCAGATCAAACGCCTGGAACAGCAGCTGGCGGTACGCCTGTTCGACCGCGTGCATCGCGGATTGGTGCTGACGGAAGCGGGCGAACTGTTGCTGCGTTACGTGCAGGAGGGCCTGCACAGCCTGGACAGCGGCCTGCAGGCGGTGGTCGCGCGGCAGCAGCATGAGGTGCTGCAGGTGGCCACCGATTTCGCCTTCGCCGCCTACTGGCTGATGCCGCGTCTGCAGCGCTTCCATCAGCTGCACCCGGAGGTGGACGTGAGCCTGGTGACCACCGAGCGCGACTTGGGCGGCAACCTGCCGGGCGAGATCGACGTGGCCATCAGTTTCGGCGACGGTCGCTGCAAGCACGGCGAGAGCCTGCTGCTGTTCGGCGAGGAAGTGTTCCCGGTGTGCAGTCCGCACCTGCTGCACGGCCGCGAGCCGGTGGACTCGGCGGCATTGTTGGCGCGCCTGCCACTGCTGCATCTGCGCCCGGAGGCGCGCGCCAACTGGTTTGCCTGGGATGGCGTATTCCGCGCGCTGGGCATTGCCGAGCCCCCTTCTGCCGGCGCCCTGCGCTTCGACAACTACACCTTGCTGATCCAGGCCGCCATCGCCGGCCAGGGCGTGGCCATCGGCTGGCGCTACCTGGTGGACGAGCTGTTGGCCCAGGGGCTGCTGGTGCGCATGCTGGACACCTCGATCCGCTCGGCCTATGGCTATTACGTGGTGATGCCCGAGCGCAAGCGGCGTGCGCGGCTGGTGCGCTGCTTCGTCGACTGGCTGCAGGACGAGCTGGCCAGCCTGCAGCGGCAGCCGCCGCAAGGTGGTTGGGCGGGTGTCGCGATCTAG MRKVLDEISLDSLRVFESAARLLSFTAAANEQGSSQPAISQQIKRLEQQLAVRLFDRVHRGLVLTEAGELLLRYVQEGLHSLDSGLQAVVARQQHEVLQVATDFAFAAYWLMPRLQRFHQLHPEVDVSLVTTERDLGGNLPGEIDVAISFGDGRCKHGESLLLFGEEVFPVCSPHLLHGREPVDSAALLARLPLLHLRPEARANWFAWDGVFRALGIAEPPSAGALRFDNYTLLIQAAIAGQGVAIGWRYLVDELLAQGLLVRMLDTSIRSAYGYYVVMPERKRRARLVRCFVDWLQDELASLQRQPPQGGWAGVAI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0066 CDS 63685 64587 + pbpG D-alanyl-D-alanine endopeptidase YP_001185572.1 146305107 5106251 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 ; specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7 3.4.16.4 Periplasmic[Class 3] PF00768|Peptidase_S11, D-alanyl-D-alanine carboxypeptidase|29|256|2e-63 COG1686|DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]. GTGAAACTCCGATATTCGATTTTGGGCCTGCTGCTGAGCGCCGGCCTTGTTGTCTCGAACCTTCAGGCCGCGCCGGCCCAGCCGCAACAGGAACTTGCTGCGGGCAGCGCATTGCTGATCGACCTGAAGACCGGAAAGGAACTCTATTCCAGCAATCCCGACCTGCGTCTGCCGGTGGCTTCGGTGACCAAGCTGATGACCGCCATGGTGGTGCTCGATGCCAAGCTGCCGCTGGACGAGGTGCTGCCCATCACCATCCGCGACACCAAGGAGATGCAGGGCGTCTACTCGCGCGTACGCATCGGCAGCGAGATCAGCCGGCGCGACATGCTGCATCTGGCCCTGATGTCCTCGGAGAACCGCGCCGCCGCCAGCCTGGCCCACCACTATCCCGGTGGCCACGTGGCGTTCGTCGCGGCGATGAACGCCAAGGCCAAGGCGCTGGGCATGCACAACAGCCATTTCGTCGAGCCCACCGGCATGTCCGAGCGCAACGTCGCCACCGCCCGCGACCTGGCGCTGATGATCAAGGCCACCCAGCAGTACCCGCTGATCGGCCAGTTCAGCACCGACTCCGAGGCGACCGTCACCTTCCGCAAGCCGACCTATACCCTGGGCTTTCGCAACACCAACGCACTGGTGCGCAAGCCCGACTGGGACATCGGCATGAGCAAGACCGGCTTTACCAACGCCGCGGGGCGCTGCCTGGTGATGCTCACCTCGATGAACCAGCGTTCGGTGGCCTTCGTCGTGCTCGGTGCGTTCGGCAAGTACACCCATATGGCCGACGCCAACCGCCTCAAGCGCTGGATGGAGACCGGCAAGGTGACGCCGGTGCCGGCCGCCGCGCTCAGCTACAAGCAGCAGAAGCTGACCGAATGGAGCATGCAGGCCGCGCAGTGA MKLRYSILGLLLSAGLVVSNLQAAPAQPQQELAAGSALLIDLKTGKELYSSNPDLRLPVASVTKLMTAMVVLDAKLPLDEVLPITIRDTKEMQGVYSRVRIGSEISRRDMLHLALMSSENRAAASLAHHYPGGHVAFVAAMNAKAKALGMHNSHFVEPTGMSERNVATARDLALMIKATQQYPLIGQFSTDSEATVTFRKPTYTLGFRNTNALVRKPDWDIGMSKTGFTNAAGRCLVMLTSMNQRSVAFVVLGAFGKYTHMADANRLKRWMETGKVTPVPAAALSYKQQKLTEWSMQAAQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0067 CDS 64684 65592 - LysR family transcriptional regulator YP_001185573.1 146305108 5106252 PFAM: regulatory protein, LysR ; PFAM: regulatory protein, LysR; LysR, substrate-binding Cytoplasmic[Class 3] TIGR03339|phn_lysR|aminoethylphosphonate catabolism associated LysR family transcriptional regulator|subfamily|5e-11||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|89|294|1e-29 ; PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|5|63|2e-13 COG0583|LysR, Transcriptional regulator [Transcription]. ATGAAGATCAGCCTGGAAGAAATGCTCGCGTTCGTTTGCGTGGTCGACAGCGGCTCCATCAGCGCGGCGGCCGAGCAACTGGAGCAGACCGCCTCCGGCGTCAGCCGCGCCCTCGGTCGTCTCGAGGAGAAGCTCGCGGTGACGCTGTTGCGCCGCACCACCCGGCGCCTGGAGCTGACCGAGGAGGGCGAGGTGTTTCTCGTCCAGGCGCGGCGCATTCTCGACAGCGTCGAGGAGGCCGAGGAGCAGATGGCCGTGCGCCGCCAGGCGCCGGCCGGACGCCTGCGCATCAACACCGCCTCGCCCTTCATGTTGCATGTGATAGTCCCGCTGATTGGCGATTTTCGCGCTCTTTATCCGCAGATCGAGCTGGAGCTGAACAGCGATGACCGCATCATCGATCTGCTGGAACGGCGTACCGACCTGGCCATCCGTATCGGCCATCTGCCCGACTCGAGCCTGCATGCACGCCCGCTATGCCATAGCCGCCGTCGCGTGCTGGCCAGCCCGGATTACCTGGCCAGGCATGGCCAGCCGATGCGCACCGAGGAGCTGGCCGGGCACAGCCTGATCGGCTTCACCGAACCGGACAGCCTCAATGAATGGCCGCTGCGCCATGCCCTCGGCGAGCGCTGGCGCATTACGCCCAGCCTGCACGTTTCCAGTGGCGACACCGTGCGGGAGCTGGCTCTGGCGGGTCAGGGCCTGGTCTGTCTGTCGGACTTCATGACCGACGTCGACCGCGCCAGCGGCCGTCTGGTGGAGGTGCTGGCCGAGCAGCGCGTGGAGGTGCGCCAGCCCATCAACGCGGTGTACTACCGCAATACGGCGCTGGCCTCGCGCATCACCTGTTTTCTCGATTTTCTCAGCGAGCGACTAGGCTCGCCCGGGCTGACGCCCCACGACTGA MKISLEEMLAFVCVVDSGSISAAAEQLEQTASGVSRALGRLEEKLAVTLLRRTTRRLELTEEGEVFLVQARRILDSVEEAEEQMAVRRQAPAGRLRINTASPFMLHVIVPLIGDFRALYPQIELELNSDDRIIDLLERRTDLAIRIGHLPDSSLHARPLCHSRRRVLASPDYLARHGQPMRTEELAGHSLIGFTEPDSLNEWPLRHALGERWRITPSLHVSSGDTVRELALAGQGLVCLSDFMTDVDRASGRLVEVLAEQRVEVRQPINAVYYRNTALASRITCFLDFLSERLGSPGLTPHD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0068 CDS 65802 66605 + aldo/keto reductase YP_001185574.1 146305109 5106253 PFAM: aldo/keto reductase Cytoplasmic[Class 3] TIGR01293|Kv_beta|voltage-dependent potassium channel beta subunit|subfamily|1.7e-06||No Data|No Data PF00248|Aldo_ket_red, Aldo/keto reductase family|4|253|6e-71 COG0656|ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]. ATGAAATTCATCCCTGCCTTCGGTCTTGGCACCTTTCGCCTCAAGGATCAGGTCGCCATCGACTCGGTGCGCACCGGTCTGGAGCTGGGCTACCGGCATATCGACACGGCGCAGATCTACGGCAACGAGGCCGAGGTCGGCCAGGCCATCGCCGCCAGCAGCGTGGCGCGCGACGAGCTGTTCGTCACCACCAAGATCTGGACCGAGAACCTCGGCCCTGGCCGGGTGATCGCCAGCCTGCAGGAGAGCCTGCAGCGCCTGGGCCTGGAGCGGGTCGACCTGTGCCTGATCCACTGGCCGTCGCCGGGCGACGAGATCCCCGTGGCGCAGTACCTGGGCGAGCTGCTGGAGGCCAAGCGCCAGGGACTGACCGCGGCCATCGGCGTGTCCAACTTCACCATCGCCCATCTGCAGCAGGCTATCGAGGCAGTGGGTGCCGACGAGATCGCCACCAACCAGGTCGAGATCCACCCGCTGCTGCAGAATCGCAAGCTGGTCGACTTCACCCGCCAGCAGGGTATCCACCTCACCGCCTACATGCCGCTGGCCTACGGCAAGGTGCTGGCCGAGCCGGAGATCCAGCGCATCGCCGCCGCCCATGGCGTCAGCCCGGCGCAGGTCGCCCTGGCCTGGTCGCTGCAACAGGGTTATGCGGTGATCCCCTCCTCAACCAAGCGCGAGAACCTGGCCGCCAATCTGGCAGCCGCCGAGTTGCGCCTCAGCACCGAAGACATGGCCGCCATCGCTACCCTGGAGCGTGGCGAGCGGGTGGCCAACCCGGGGTTTGCGCCGCGCTGGGATTGA MKFIPAFGLGTFRLKDQVAIDSVRTGLELGYRHIDTAQIYGNEAEVGQAIAASSVARDELFVTTKIWTENLGPGRVIASLQESLQRLGLERVDLCLIHWPSPGDEIPVAQYLGELLEAKRQGLTAAIGVSNFTIAHLQQAIEAVGADEIATNQVEIHPLLQNRKLVDFTRQQGIHLTAYMPLAYGKVLAEPEIQRIAAAHGVSPAQVALAWSLQQGYAVIPSSTKRENLAANLAAAELRLSTEDMAAIATLERGERVANPGFAPRWD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0069 CDS 66677 67420 - short-chain dehydrogenase/reductase SDR YP_001185575.1 146305110 5106254 PFAM: short-chain dehydrogenase/reductase SDR ; PFAM: short-chain dehydrogenase/reductase SDR; KR Pentose phosphate pathway [KEGG] Cytoplasmic[Class 3] TIGR01831|fabG_rel|3-oxoacyl-(acyl-carrier-protein) reductase, putative|hypoth_equivalog|1.1e-32||Fatty acid and phospholipid metabolism|Biosynthesis PF00106|adh_short, short chain dehydrogenase|6|174|3e-21 ; PF08659|KR, KR domain|6|166|5e-13 COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ATGCGCAAGAATCTGCTGATCACCGGTGCCAGCCGCGGCATCGGCCGTGCCACGGCCCTGCTGGCCGCCGCGGGCGGCTGGACGGTCGGGGTGAACTATCGCAGCGACCGCGCCGCCGCCGATGAGGTGGTGGCGCAGATCGAAGCCATGGGCGGCACAGCCGTCGCCCTGCCTGGCGACGTGGCCAATGAGCAAGAGGTGCAGCGCCTGTTCGAGGCCATGGACAGGCTCGGCCCGCTGCACGGTCTGGTGGTCAATGCCGGCATCGTCGCACCGCCCCTGCCGCTGCTGGAGATGAGCGGCGAGCGCCTGCGGCGCATGTTCGACGTCAACGTGCTGGGCAGCTACCTGACCGCGCGCGAAGGCGCCCGGCGCATGGCGCGCAGTCGCGGCGGCGAAGGTGGCTCGATGGTGCTGGTGTCTTCGGTGGCCGCCAGCCTGGGCGCGCCGTTCGAATATGTCGACTACGCCGGCGCCAAGGGTGCCATGGACGTGCTGACCCGCGGCCTGGCCAAGGAGCTGGGCGGTGAGGGTGTACGGGTCAATGCCGTGCGGCCGGGGCTGATCGACACCGAGATCCACGCCAGCGGCGGCCAGCCGGATCGCGCCGAGCGCCTCGGCAAGGCCACCCCGCTGGGCCGCGCCGGCCGCGCGGAGGAGGTTGCCGAGGCCATCGTCTGGCTGCTCGATGACAAGGCCAGCTACACCACCGGTGCGCTGATCGATATTGCCGGCGGGCGTTGA MRKNLLITGASRGIGRATALLAAAGGWTVGVNYRSDRAAADEVVAQIEAMGGTAVALPGDVANEQEVQRLFEAMDRLGPLHGLVVNAGIVAPPLPLLEMSGERLRRMFDVNVLGSYLTAREGARRMARSRGGEGGSMVLVSSVAASLGAPFEYVDYAGAKGAMDVLTRGLAKELGGEGVRVNAVRPGLIDTEIHASGGQPDRAERLGKATPLGRAGRAEEVAEAIVWLLDDKASYTTGALIDIAGGR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0070 CDS 67576 68385 - trpA tryptophan synthase subunit alpha YP_001185576.1 146305111 5106255 TIGRFAM: tryptophan synthase, alpha subunitPFAM: tryptophan synthase, alpha chain ; catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis Glycine, serine and threonine metabolism [KEGG] ; Phenylalanine, tyrosine and tryptophan biosynthesis [KEGG] ; Metabolic pathways [KEGG] ; Two-component system [KEGG] 4.2.1.20 Cytoplasmic[Class 3] biological_process|GO:0000162|tryptophan biosynthetic process|IEA ; molecular_function|GO:0004834|tryptophan synthase activity|IEA TIGR00262|trpA|tryptophan synthase, alpha subunit|equivalog|4.4e-79|4.2.1.20|Amino acid biosynthesis|Aromatic amino acid family PF00290|Trp_syntA, Tryptophan synthase alpha chain|9|265|1e-97 COG0159|TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. ATGAGCCGCCTGCAGAACCGTTTCGCCGAACTGAAAGCGGAAAACCGCGCCGCGCTGGTGACCTTCGTCACCGCCGGTGATCCCGACTACGCCACCTCGCTGAGCATTCTCAAGGGCCTGCCGGAGGCCGGCGCCGACGTGATCGAGCTGGGCATGCCCTTCACCGACCCGATGGCCGACGGCCCGGCCATCCAGCTCGCCAACATCCGCGCACTGGCCGGCAAGCAGGGCATGCAGCAGACGCTGCAGATGGTTCGCGAATTCCGCGCCGGCAACCAGAGCACGCCGCTGGTGCTGATGGGCTACTACAACCCGATCTTCGTCTACGGCGTCGAGCGCTTCATCAGCGACGCCAAAGAGGCCGGCGTCGACGGCCTGATCGTGGTCGACCTGCCGCCGGAGCACAACGACGAGCTGTGCGAACCGGCGCAGAGCGCAGGTCTGGATTTCATCCGCCTGACTACCCCGACCACCGACGACGACCGCCTGCCCACCGTGCTGGCCGGCAGCTCCGGCTTCGTCTACTACGTGTCGGTGGCCGGTGTCACCGGCGCCGGTGCGGCGACCCTGGATCATGTCGAGGAAGCCGTGGCGCGCCTGCGTCGCCACACCGACCTGCCCGTTTGCATCGGCTTCGGCATCCGCACCCCGGAGCACGCCGCCGAAGTGGCCAAGCGCGCCGAGGGCGCGGTGGTCGGCTCGGCGCTGATCGACAAGATCGCCGAGGCGAAGAGCCCGCAGCAGGCCATCGACGGCGTACTCGGCCTGTGCCGCGAACTGGCCGAAGGGGTACGCGGCGCGCGCCGCTGA MSRLQNRFAELKAENRAALVTFVTAGDPDYATSLSILKGLPEAGADVIELGMPFTDPMADGPAIQLANIRALAGKQGMQQTLQMVREFRAGNQSTPLVLMGYYNPIFVYGVERFISDAKEAGVDGLIVVDLPPEHNDELCEPAQSAGLDFIRLTTPTTDDDRLPTVLAGSSGFVYYVSVAGVTGAGAATLDHVEEAVARLRRHTDLPVCIGFGIRTPEHAAEVAKRAEGAVVGSALIDKIAEAKSPQQAIDGVLGLCRELAEGVRGARR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0071 CDS 68382 69617 - tryptophan synthase subunit beta YP_001185577.1 146305112 5106256 TIGRFAM: tryptophan synthase, beta subunitPFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit ; catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate Glycine, serine and threonine metabolism [KEGG] ; Phenylalanine, tyrosine and tryptophan biosynthesis [KEGG] ; Metabolic pathways [KEGG] ; Two-component system [KEGG] 4.2.1.20 Cytoplasmic[Class 3] biological_process|GO:0000162|tryptophan biosynthetic process|IEA ; molecular_function|GO:0004834|tryptophan synthase activity|IEA TIGR00263|trpB|tryptophan synthase, beta subunit|equivalog|4.5e-292|4.2.1.20|Amino acid biosynthesis|Aromatic amino acid family PF00291|PALP, Pyridoxal-phosphate dependent enzyme|64|390|7e-76 COG0133|TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. ATGACAGCCATGCCTGGTTCACAGAATTCTTTCCGCACCGGCCCCGACGCTCGCGGCCTGTTCGGCCGCTTCGGCGGTCAGTTCGTCGCCGAAACCCTGATGCCGCTGATCAACTCGCTGGCCGCCGAATACGAAAAGGCCAAGAGCGATCCGGCCTTCCTCGAAGAACTGGCCTACTTCCAGCGCGACTACATCGGTCGCGCCAGCCCGCTTTACTACGCCGAGCGCCTGAGCCAGCACTTCGGCGGCGCGAAGATCTACCTCAAGCGCGAAGACCTGAACCACACCGGCGCGCACAAGATCAACAACTGCATCGGCCAGATCCTCCTGGCCAAGCGCATGGGCAAGCAGCGCATCATCGCCGAGACCGGCGCCGGCATGCACGGCGTGGCCACCGCCACCGTGGCCGCGCGCTTCGGCATGCAGTGCGTGGTGTACATGGGCACCACCGACATCGACCGCCAGCAGGCCAACGTCTTTCGCATGAAGCTGCTCGGCGCCGAGGTAATTCCGGTCACCGCCGGCACCGGCACCCTCAAGGACGCCATGAACGAGGCCCTGCGCGACTGGGTGACCAACGTCCACAACACCTTCTACCTGATCGGCACCGCCGCCGGCCCGCACCCGTACCCGGCCATGGTCCGCGACTTCCAGTCGGTGATCGGCAACGAAGTGCGTGAGCAGATCCTGGCGAAGGAAGGGCGTCTGCCCGACTCGCTGGTGGCCTGCATCGGTGGTGGCTCCAACGCCATCGGCCTGTTCCACCCCTTCCTCGATGATGAAGGCGTGCAGATCATCGGCGTCGAGGCGGCCGGCCACGGCATCGACACCGGCAAGCATGCGGCGAGCATGGCCGGCGGCGCGCCGGGCGTGCTGCACGGCAACCGCACCTTCCTGCTGCAGGACGAGGACGGCCAGATCACCGATGCCCACTCGATTTCCGCCGGCCTCGATTACCCCGGCGTCGGCCCGGAACACGCCTGGTTGCACGAGATCAAGCGCGTCGAATACGTGCCGATCAGCGATGACGAAGCCCTCGAAGCCTTCCACCACTGCTGCCGCCTGGAAGGCATCATCCCGGCCCTGGAAAGCGCTCATGCGCTGGCCGAAGCCTTCAAGCGTGCGCCGAAACTGCCCAAGGATCACCTGATGGTGATCAACCTGTCCGGTCGTGGCGACAAGGACATGCAGACCGTGATGCACCACATGCAGGACAACCAGGAGAAACACGCATGA MTAMPGSQNSFRTGPDARGLFGRFGGQFVAETLMPLINSLAAEYEKAKSDPAFLEELAYFQRDYIGRASPLYYAERLSQHFGGAKIYLKREDLNHTGAHKINNCIGQILLAKRMGKQRIIAETGAGMHGVATATVAARFGMQCVVYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVHNTFYLIGTAAGPHPYPAMVRDFQSVIGNEVREQILAKEGRLPDSLVACIGGGSNAIGLFHPFLDDEGVQIIGVEAAGHGIDTGKHAASMAGGAPGVLHGNRTFLLQDEDGQITDAHSISAGLDYPGVGPEHAWLHEIKRVEYVPISDDEALEAFHHCCRLEGIIPALESAHALAEAFKRAPKLPKDHLMVINLSGRGDKDMQTVMHHMQDNQEKHA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0072 CDS 69732 70400 + hypothetical protein YP_001185578.1 146305113 5106257 Cytoplasmic Membrane[Class 3] ATGAAGGATCGCTGGTTATGGACTTTTCCCGTGGTAGGCGCTTTTCTTGTTGCCATCGCATTGGTACTACAAATTCACAGATGGAACGAAGAGGAGCGCATGTTGCGAACGACCGGCAGTGTGGTGGCGGTGATGGGCAGGGGTTGTCCTCTCGTCGAGTTCTTCCCCCTTCCGGGGGAGCGAGTCACCTTCACTGGCGAGGTCTGCAGCCGGCCTGGTTATGCCAAAGGCGATATTGTCGAGCTGTTCTACGACCCCTTGGAGCCGCAGAACGCGCATATCGATAGCTTTCTGCAGAACTGGTTCGTCAGCCTGATACTAGGTGGCATTGGTCTGTTCTTTACGTTAGTCGGTCTGGCTCTGTTAATGCCCGAGGCGCTTGTCGACGGTCGGCGCAATCGACTCAAACGTAAAGGCCAGGCCGTACAGGCACAGTTCGTGGAGGTCCGGCGCAACCCGCTTTCCACCCTCAACAACGTGCCGGCCTGGCAACTGGTCTGCCAGTGGTACAACCCGAGCAGCGGCGCGGTACATCTGTTCTACAGCGAAGACCTGTGGTTCGACCCGCAGCCGTTTATCGAGAATGAATTTCTGCAGGTAATGGTCGATCCCGATGACCTTCGGCGTTATAGCGTCGATACCAGCTTCCTACCGCGCCTGGCAGATTGA MKDRWLWTFPVVGAFLVAIALVLQIHRWNEEERMLRTTGSVVAVMGRGCPLVEFFPLPGERVTFTGEVCSRPGYAKGDIVELFYDPLEPQNAHIDSFLQNWFVSLILGGIGLFFTLVGLALLMPEALVDGRRNRLKRKGQAVQAQFVEVRRNPLSTLNNVPAWQLVCQWYNPSSGAVHLFYSEDLWFDPQPFIENEFLQVMVDPDDLRRYSVDTSFLPRLAD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0073 CDS 70405 71316 + LysR family transcriptional regulator YP_001185579.1 146305114 5106258 PFAM: regulatory protein, LysR ; PFAM: regulatory protein, LysR; LysR, substrate-binding Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|3.3e-22||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|8|66|8e-17 ; PF03466|LysR_substrate, LysR substrate binding domain|90|293|1e-12 COG0583|LysR, Transcriptional regulator [Transcription]. ATGAATCGCGACCTGCCCCCGCTAAACGCTCTGCGCGCCTTCGAAGCGGCTGCCCGCCTGCAAAGCGTCAGCCGCGCCGGCGAGGAGCTGCACGTCACCCATGGCGCGATCAGCCGCCAGATCCGCGTGCTGGAGGAGCAACTTGGCGTCAGCCTGTTCGACAAGGACGGCCGCGGCGTGAAACTCACCGAGGCCGGGGTGCGCCTGCGCGATGCGGCGGGCGATGCCTTCGAGCGTCTGCGTGGGGTCTGCGCCGAGATCCGCCAACGCCAGGAGGGCGCCCCCTTCGTGCTCGGCTGTCCCGGCAGTCTGCTGGCGCGCTGGTTCATTCCCCGCCTGGATCGCCTGAACCGCGATCTGCCCGAGTTGCGTCTACAGCTGTCGGCCAGCGAGGGTGAGCTGGACCCGCGCCGGCCCGGTGTGGACGCCACACTGTGTTTCGCCACGCCGCCCTGGCCGGCGGATGTACAGGTGCATGAACTGGACACCGAGCGCATCGGGCCGGTGCTCAGCCCGCGCTATGCCGGGTATGAGGCTCTGCGGGGTGCGCCCGCCGCCGCGCTGCTCGGCGAGCCGCTGCTGCATACCGTGTCGCGGCCACAGGCCTGGCCGCAATGGGCGCTGGCGCAGGGGCTGGAGCCGGCGCGCCTGCAGCAGGGGCAAGGCTTCGAACATCTCTACTACCTGCTGGAGGCTGCCGCCGCAGGGCTTGGCGTGGCCATCGCGCCGCAGCAATTGGTGGCGGACGATCTGGCCGCCGGGCGCCTGCTGGCGCCCTGGGGCTTCGTCGAGACAGGGGCAAAACTGGCCCTGTGGGTGCCGGGCCGAGGGCATGACCTGCGTGCCGAGCGCCTGGCCGGCTGGCTGGCCGCGGAGCTGAACGGACTTGCTGCGCTTCGGTCGCCGGTATAG MNRDLPPLNALRAFEAAARLQSVSRAGEELHVTHGAISRQIRVLEEQLGVSLFDKDGRGVKLTEAGVRLRDAAGDAFERLRGVCAEIRQRQEGAPFVLGCPGSLLARWFIPRLDRLNRDLPELRLQLSASEGELDPRRPGVDATLCFATPPWPADVQVHELDTERIGPVLSPRYAGYEALRGAPAAALLGEPLLHTVSRPQAWPQWALAQGLEPARLQQGQGFEHLYYLLEAAAAGLGVAIAPQQLVADDLAAGRLLAPWGFVETGAKLALWVPGRGHDLRAERLAGWLAAELNGLAALRSPV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0074 CDS 71370 71609 + hypothetical protein YP_001185580.1 146305115 5106259 Unknown[Class 3] ATGAAAGAAAGTCGTGACTATCTGGAGATGGCCTTCCGCTCCATCAAATGCTTCGCCGATGACGGCAAGCTGCTGGTTCACGAGCTCGAAAGCCTGGTCGATATCGCCCGCCGCGACGGCGTGGTCGATGCCAACGAGAAGCGCATCCTGCAGGGCATCGTCGCCCGCCTGAACCCCGCCGAACTGACCGCCGACATGCAGACCAAGATCGCTGCGCTGAGGGCCGAGCTGCAGTTTTGA MKESRDYLEMAFRSIKCFADDGKLLVHELESLVDIARRDGVVDANEKRILQGIVARLNPAELTADMQTKIAALRAELQF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0075 CDS 71708 71923 + hypothetical protein YP_001185581.1 146305116 5106260 PFAM: protein of unknown function DUF1458 Unknown[Class 3] PF07311|DUF1458, Protein of unknown function (DUF1458)|5|70|4e-27 COG3360|COG3360, Uncharacterized conserved protein [Function unknown]. ATGACCGATCACCACACCTACAAGAAGATCGAAATCGTTGGTTCATCGCGAACCAGCATCGAGGACGCCATCGAGAACGCCCTGAGTGAGTGCGCCAAGAGCGTACGCAACATGGACTGGTTCGAGGTGGTGGAAACCCGTGGCCATATCGAGGACGGCAAGGTGGGTCACTACCAGGTCACCCTCAAGGTCGGCTTTCGCCTGAGCGGTAGCTGA MTDHHTYKKIEIVGSSRTSIEDAIENALSECAKSVRNMDWFEVVETRGHIEDGKVGHYQVTLKVGFRLSGS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0076 CDS 71892 72869 - NAD-dependent epimerase/dehydratase YP_001185582.1 146305117 5106261 PFAM: NAD-dependent epimerase/dehydratase ; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain Cytoplasmic[Class 3] TIGR01777|yfcH|conserved hypothetical protein TIGR01777|hypoth_equivalog|1.9e-06||Hypothetical proteins|Conserved PF02719|Polysacc_synt_2, Polysaccharide biosynthesis protein|3|117|5e-07 ; PF07993|NAD_binding_4, Male sterility protein|5|197|2e-06 ; PF04321|RmlD_sub_bind, RmlD substrate binding domain|3|300|1e-07 ; PF01370|Epimerase, NAD dependent epimerase/dehydratase family|3|187|2e-20 ; PF01073|3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family|4|180|2e-11 COG0451|WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]. ATGCGCGTTCTGATCACCGGCGCAGCCGGCTTCATCGGCCACCAACTGCTCGACGAACTGGCCATTCAGCATCCGCAATGGACGCTGATCGCCGCCGATATCCGCGCGCTCGACAGTCGCGGGCTGAAAGCCAACGTCGAGCCGGTGTTGCTGGACATGGGCCGCCCCGCGCAGGTGCGGGCCTGCGTTGCCGGCTGGAAGCCGGACGCCATCGTCCACCTGGCCACCGTGATACGGCCACCGCGCGACATGAGCGAAGCACATCTGCACGCCATCGAAGTGGGCGGCACCCAGTGCCTGGTGGACAGCGCCATCGCCAACGGTGTGCGCCAGCTGATCGTCACCAGCTCCGGCGCCGCCTATGGCTATGCCCCCGAGAATGCCGAGTGGATAGACGAGAATCAGCCGCTGCGTGGGCACCCGCATTTCGTCTACGCCAGGCACAAGCTGGAGATCGAGCAGCTGTTGGCGCGCAGCCGCGCCCAGCATCCGCAGCTGCATCAGCTGATCCTGCGTCCCGGCACCATTCTCGGCCGCCGTCTGAACAACCCGATCAGCGACCTGTTCAAGAAACGCGCCGTGCTCGGCGTCCGCGGTCATGACAGCCGCTTCGTGTTCATCTGGGAGCAGGACGTGGTCGGCATCATCCGCCAGGGGCTGGAGACCGCTCGCGAAGGCATCTACAACCTGGCCGGCGATGGCGCCCTGAGCCTGGCGGAGATCGCCGAGATTCTCGGCAAACCCTACCGGCCCGTGCCGGCCACGCTGCTGGCCGCTGCGCTGCGCCTGCTCAAGCCGCTGGGGCTGAGCCAGTACGGCCCGGAGCAACTGGACTTTCTGCGCTACCGGCCGGTGCTGGCCAACCAGCGGTTGAAGGAGGAGTTCGGCTATCAGCCGCGCTACACCAGCCGCGAAGCCTTTCTCGCCTTCCTCAACGCACAGGGCATCAGCTACCGCTCAGGCGAAAGCCGACCTTGA MRVLITGAAGFIGHQLLDELAIQHPQWTLIAADIRALDSRGLKANVEPVLLDMGRPAQVRACVAGWKPDAIVHLATVIRPPRDMSEAHLHAIEVGGTQCLVDSAIANGVRQLIVTSSGAAYGYAPENAEWIDENQPLRGHPHFVYARHKLEIEQLLARSRAQHPQLHQLILRPGTILGRRLNNPISDLFKKRAVLGVRGHDSRFVFIWEQDVVGIIRQGLETAREGIYNLAGDGALSLAEIAEILGKPYRPVPATLLAAALRLLKPLGLSQYGPEQLDFLRYRPVLANQRLKEEFGYQPRYTSREAFLAFLNAQGISYRSGESRP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0077 CDS 73153 73734 + hypothetical protein YP_001185583.1 146305118 5106262 Unknown[Class 3] ATGTTCAGATCAATGCTGATGTTGCTGGCCGCGCTGGCGCTGGGTGGCTGCATCGAAAGCGAAACGCCGCTGGTCGAAGAGCGCCGCCTGCTGCTCAGCGGGGAGGATTTCTCCGCCTACGATGCGCCGGATGGCGGTCGCTACGAGAAGCTGGTGACCTATGCGGCGCGCAGCATCGACCTCAGCTTCGAGAGCGAAGGCAGCGACTGGTTCTACCTCTACAGCGGCGTTTCGCTCTATCCGCGCGCCAGCGACGCGCTGATGACCAGCTACGCGGAAACCTTCGGCGCCTCGTTCGGCCTGCGCGGCAGCGGCCTGGTCGAGCAGGAGTTGCCGCTGCAAACCAAGCTGGCCGCACGCGCCAGCCTCAAGCTGCTGACCCAGGACGGCGAGCCGGTGGGCAACCTGTTCTATGCCACGGTCGGCAACAAGTCGATGTTCACCATCTTCACCGGCGTCTACTTCGAGCGTGCCGAGGATTTCGAGGCCTTCGTCGCGCCCAAGCTGCTCGCCCTGCGTCAGTACAAGCACGACGATCCGCTGCTGACCTGGGCTGGCAGGACGCTCGGTTTCGACGAATAG MFRSMLMLLAALALGGCIESETPLVEERRLLLSGEDFSAYDAPDGGRYEKLVTYAARSIDLSFESEGSDWFYLYSGVSLYPRASDALMTSYAETFGASFGLRGSGLVEQELPLQTKLAARASLKLLTQDGEPVGNLFYATVGNKSMFTIFTGVYFERAEDFEAFVAPKLLALRQYKHDDPLLTWAGRTLGFDE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0078 CDS 73972 75201 - nucleoside recognition domain-containing protein YP_001185584.1 146305119 5106263 PFAM: nucleoside recognition domain protein Cytoplasmic Membrane[Class 3] COG2715|SpmA, Uncharacterized membrane protein, required for spore maturation in B.subtilis. [General function prediction only]. ATGCTCAACGGCCTTTGGCTGAGTTTTTTCCTGCTGGGTGCGATCGCCGCCCTGGCCCGCTGGCTGATCGGTGGCGACGCCACCGTGTTCGGCGCCATGGTCGAGAGCCTGTTCGCCATGGCCAAGCTCTCGGTGGAGCTGATGGTGGTGCTGTTCGGCACGCTGACGCTGTGGCTCGGCCTGTTGCGCATCGCCGAGAAGGCCGGTCTGGTCGATCTGCTGGCGCGCCTGCTGGGCCCGCTGTTCGCCCGCTTGATGCCGGAAGTGCCGCGCGGTCACCCGGCGCTGGGACTGATCAGCATGAACTTCGCCGCCAATGGCTTGGGCCTGGACAACGCGGCCACGCCCATCGGCCTGAAAGCCATGCGCGCCCTGCAGGATCTCAACCCCAGCGCCACCACCGCGAGCAATGCGCAGATCCTGTTTCTGGTGCTCAACACCTCGTCGCTGACCCTGCTGCCGGTATCGATCTTCATGTACCGCGTGCAGCAGGGCGCGGAAGACCCGACCCTGGTCTTCCTGCCGATCCTGCTCGCCACCAGCGCCTCGACGCTGGCCGGGCTGCTGGCCGTGGCCCTGGTGCAACGCCTGCGCCTGTGGGACCCGGTGGTGCTGGCCTACCTGATCCCCACCGCCTTGCTGCTGGGCGGCTTCATGGCATTGCTGGCCGGCATGAGCGCCACCGCGCTGGCGGCGCTGTCCTCGCTGCTCGGCAACCTCACCCTGTTCGGCCTGATCATGCTGTTCCTGTTGGTCGGCGCCCTGCGCCGGGTGGCGGTGTACGAAAGTTTCATCGAAGGCGCCAAGGACGGCTTCGACGTGGCCAAGAGCCTGCTGCCGTATCTGGTGGCCATGCTCTGCGCCATCGGCGTGCTGCGCGCCTCCGGCGCCCTGGATTTCGGCCTCGACGGCATCCGCTGGCTGGTCGAGGCGCTGGGCTGGGATACCCGTTTCGTCGACGCCCTGCCGACCGCGCTGATGAAGCCCTTCTCCGGTGGCGCCGCGCGCGCCATGCTGATCGAGACCATGGAGAATTTCGGCGTCGACAGCTTCCCCGCCCTGATCGCCGCCACCGTGCAGGGCAGCACCGAAACCACCTTCTACGTGCTGGCGGTGTACTTCGGCGCCGTCGGCCTGCAGCGCGCCCGTCACGCCGTGGGCTGCGCGCTGGTGGCCGATGCGGCTGGGATCATCGCCGCCATCGGCGTGTGCTACTGGTTCTTCGGCTAG MLNGLWLSFFLLGAIAALARWLIGGDATVFGAMVESLFAMAKLSVELMVVLFGTLTLWLGLLRIAEKAGLVDLLARLLGPLFARLMPEVPRGHPALGLISMNFAANGLGLDNAATPIGLKAMRALQDLNPSATTASNAQILFLVLNTSSLTLLPVSIFMYRVQQGAEDPTLVFLPILLATSASTLAGLLAVALVQRLRLWDPVVLAYLIPTALLLGGFMALLAGMSATALAALSSLLGNLTLFGLIMLFLLVGALRRVAVYESFIEGAKDGFDVAKSLLPYLVAMLCAIGVLRASGALDFGLDGIRWLVEALGWDTRFVDALPTALMKPFSGGAARAMLIETMENFGVDSFPALIAATVQGSTETTFYVLAVYFGAVGLQRARHAVGCALVADAAGIIAAIGVCYWFFG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0079 CDS 75366 75827 - hypothetical protein YP_001185585.1 146305120 5106264 Periplasmic[Class 3] PF08816|Ivy, Inhibitor of vertebrate lysozyme (Ivy)|34|151|2e-35 ATGCAGTTGATGCACGCCATTGCCGCCGCCCTGTTGATGGGTGGCGCCCTGGCGGCCCAGGCCGCCGATCGAGATGCCGCCTTCCACCCGGGCGAGCTGCTGACCAGCAACGCCGAATACCGCGAGGCCTGGCAGGATCTGGTCAAGAACGAGGAACGCCTGCCGGACTGGCTGATCAACCTCAGCGGCCTGTCGACACCGATGCAGGCCGTGGAAGCCGACAGTGACCGCTATCTGGTGGGCCAGGTGTGCGAAGCGCACAACTGCTTCAGCCAGCGCGCGTACATCGCCTTCGAATGGGAGGACGACGATGCCTATGCGCTCTACGTCCAGGTGCCCGAAGGCCTGCCGGAAGATCGCGCCCCCAGCGAGCACGCCAGCCTGCGCTGGCTGGGCGAGCCCAGCGAGGAAATCCAGCAGATGCTGATGGAGCAGCTGCGCAACGACCCCAACTGGTATTGA MQLMHAIAAALLMGGALAAQAADRDAAFHPGELLTSNAEYREAWQDLVKNEERLPDWLINLSGLSTPMQAVEADSDRYLVGQVCEAHNCFSQRAYIAFEWEDDDAYALYVQVPEGLPEDRAPSEHASLRWLGEPSEEIQQMLMEQLRNDPNWY Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0080 CDS 75838 76002 - hypothetical protein YP_001185586.1 146305121 5106265 PFAM: protein of unknown function DUF1328 Cytoplasmic Membrane[Class 3] ATGCTGAGTTGGGCACTTACCTTTCTGATCATCGCCATCATCGCTGCCGTACTGGGCTTCGGTGGTATCGCCGGCACCGCCGCAGGTATCGCCAAGATCCTGTTCGTGGTGTTCCTGGTGCTGTTCATCATCTCGTTCATCATGGGCCGTCGCCCCCGCATGTAA MLSWALTFLIIAIIAAVLGFGGIAGTAAGIAKILFVVFLVLFIISFIMGRRPRM Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0081 CDS 76022 76294 - hypothetical protein YP_001185587.1 146305122 5106266 Cytoplasmic Membrane[Class 3] ATGCACCGGTCACGAGGTTGGAAAAGGAAGGGGCGGACATGCCATTCGCCCCAATGCGACAGGAGAACCGCCATGTGGATAGTCGCTTTGGTGCTGGCAGCCTTGCTGCTACTGCTGAGTCTGATCCTCGCCAGCGTCCTGCTGGTTGGCCAGACCCTGTGCGCCAGCCGCAACACCACCGCCGAGCTGGACCTGCCCGAGGGCAGCCCGCGCCAGCCGGCCATCCCGAGCAACCCGCAACACCCCTGGCCCGCCTGGGCCGCTACCCATTGA MHRSRGWKRKGRTCHSPQCDRRTAMWIVALVLAALLLLLSLILASVLLVGQTLCASRNTTAELDLPEGSPRQPAIPSNPQHPWPAWAATH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0082 CDS 76571 76972 + thioesterase superfamily protein YP_001185588.1 146305123 5106267 PFAM: thioesterase superfamily protein Biosynthesis of unsaturated fatty acids [KEGG] Unknown[Class 3] PF03061|4HBT, Thioesterase superfamily|29|102|3e-11 COG1607|COG1607, Acyl-CoA hydrolase [Lipid metabolism]. ATGAACGACTACGAACAGGAAGATCCGATCCCTCAGGGTGACCTCGCCCTGCAGATCACTGCGCTGCCGCGCGAGACCAATGGTTTCGGTGATATCTACGGTGGCTGGCTGGTTTCGCAGATGGACCTCGCCGGTACCGCCATGGCGAGCAAGGTCGCAGGGGGCCGCGTAGCGACCGTGGCCATCGATCGCATGGCCTTTCTGGTGCCGGTGGCGGTGGGTGCGCAGTTGTCCTTCTACACCCAGGCCCTGGAAGTGGGGCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGATCCGTTGTCCAACGAATGGCGCAAGGTCACCGAGGCGGTGTTCGTCTTTGTCGCCATCGACGGCAGCGGCCGTACCCGCCCGGTACCGGCACGCCGCTGA MNDYEQEDPIPQGDLALQITALPRETNGFGDIYGGWLVSQMDLAGTAMASKVAGGRVATVAIDRMAFLVPVAVGAQLSFYTQALEVGRSSIQMMVEVWSDDPLSNEWRKVTEAVFVFVAIDGSGRTRPVPARR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0083 CDS 77048 77680 - two component LuxR family transcriptional regulator YP_001185589.1 146305124 5106268 PFAM: regulatory protein, LuxR ; PFAM: regulatory protein, LuxR; response regulator receiver Cytoplasmic[Class 3] PF00072|Response_reg, Response regulator receiver domain|8|120|4e-20 ; PF00196|GerE, Bacterial regulatory proteins, luxR family|147|189|4e-10 COG2197|CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]. ATGACCGCTGCCACCATACGAATTGCCCTGATAGACGACCACGCTCTGGTGCGCGAAGGTATTCGCGCGCTGCTCGAGGTGCTGCCTCATTTCCAGGTCGTCGGCGAGGCCGGCAGTGGCGCCGAGGCGTTCGACCTGCTGCAGCGCACCCCAGTCGACATCCTGCTGATGGATGTGGGCCTGCGCGACATCAACGGGCTGGAACTGACCCGCCAGCTGCGCGAGCGCTACCCCGCCATAAAGGTGTTGATGCTGAGCATGTACGACAATCAGGAGTACGTGAGCAGCTCGCTGGCGGTGGGCGCCAGCGGCTACGTTCTGAAGGAAGCGCCTTCCCGGGAAATCGTCGCGGCTATCGAAGCCATTGCAGCCGGCGGCAGCTTCTACAGCGGCGATATCGCGCGCAAGCTGGTCAAGCCGGCCCCCAGCGAAGACGAACTGACGCCGCGCGAACGCGAGGTGCTGCTGATGCTCGCCCAGGGTCTGAACAACAAGGTCATGGCCCGCACCCTGCAGATCAGCGTGCGCACCGTGGAAACCCATCGCCTGAGCATCAGGCGCAAACTGGCTATCGACAAGCCGGCAGACCTGCTCAAGCATGCCCTGGCCCATGGCTGGGTACCCTACGACTAG MTAATIRIALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAFDLLQRTPVDILLMDVGLRDINGLELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGASGYVLKEAPSREIVAAIEAIAAGGSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVETHRLSIRRKLAIDKPADLLKHALAHGWVPYD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0084 CDS 77721 79070 - integral membrane sensor signal transduction histidine kinase YP_001185590.1 146305125 5106269 PFAM: ATP-binding region, ATPase domain protein domain protein ; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; Cache, type 2 domain protein Cytoplasmic Membrane[Class 3] PF07730|HisKA_3, Histidine kinase|249|316|5e-11 ; PF08269|Cache_2, Cache domain|45|132|9e-23 ; PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|356|447|2e-11 COG4564|COG4564, Signal transduction histidine kinase [Signal transduction mechanisms]. ATGCAGCTCAAACACAAGATAGTCGCACTCAGCGTGCTGCCGTTGCTGCTGGCCGTGGCGGTGGTCTGTGTTCTGGTGTTCTTCCAGAACCAGCGCCTGGGCGAGCAACAGGCGCGCCTGATCGAAGACAGCATCCTGGCGAGCAAGCGCGTCGAGCTCAAACACTATGTCGAGATGGCCCTGAGCATCATTTCGCCGCTGTACGAAAGCGGCCGCGACGATGCCGAGATCAAACAGCAGGTGCTGGGGGTGCTGGCCAGAATCAGCTTCGGCAGCGACGGCTACTTCTTCGTTTACGAGAGCAACGGGCGCAACCTGATGCATCCGCGTCAGGGCGAGCTGGTCGGGCAGGACCTCTGGAACATGACCGACCCGCGCGGCCTACTGGTCATTCAGGCCCTGATGCAGAGCGCGCAGAGCGGCGACGGCTTCCAGCTTTACGCCTGGCAGAAACCGTCCACCGGCGAGGTGACCGACAAGCTGGCCTACGTAGTCATGCTCGAGCGCTGGGGCTGGATGCTCGGCACCGGGATCTATCTGGAAGACGTCGACCAGGCGATTGCCCAGGTGCACGACGAGGCCAGCAACGGCATCCATGCCACCATGCTGGCGATTGCCGGCGTGGCCTTGGTCGCCGTGCTGCTGGTATTCGCCGGCGGCCTGGCGCTGAACCTCAGCGAGCATCGCCTGGCGGATCGCAAGCTGCAGTTGCTCACCCAACGCATCGTCAGCCTGCAGGAAGAGGAGCGCTCGCGGGTCTCGCGCGAACTGCACGACGGCATCAGCCAGCTGCTCGCTTCCATCAAGTTCCAGTTCGAGCTGGCCAGCCTGGAGCTGGCCTCGGGCAATGAGCAGGGTCTGGACACGCTGCACAAGGGCACCGAGCGGCTCGCGGGTGCCATCGGCGAAGTGCGACGGATTTCCCACGACCTGCACCCCTCGCTGCTCGACACCCTCGGCCTGCCCGCCGCGATTGCTCAGCTGGTCGCCGAATTCGAGCAACGCAGCGGCCTGCTGATCGACTACAAGAACGACCTGGGCGATACACTGCTCAACGATGGGATGGCGGTTGCGCTGTTCAGGATCCTGCAGGAAGCCCTGACCAATATCGAGCGCCACGCGCAGGCGAACACCGTTGCCATCAGCCTCGACGGCCGGGCGCGACGGGTGCGTTTGCGGGTTCGCGACGACGGTGTCGGTTTCAGCTCCCGGCATTTCGACACCCTGACTGGCGGTATCGGCTTGCGCAACATCCGCCAGCGTGTCGAACATTTTGGCGGGCGCTTCGCCCTGACCTCGCAACCCGGCCACACGGAGCTGATGGTGACGCTGCCACTACCGACACCCTAG MQLKHKIVALSVLPLLLAVAVVCVLVFFQNQRLGEQQARLIEDSILASKRVELKHYVEMALSIISPLYESGRDDAEIKQQVLGVLARISFGSDGYFFVYESNGRNLMHPRQGELVGQDLWNMTDPRGLLVIQALMQSAQSGDGFQLYAWQKPSTGEVTDKLAYVVMLERWGWMLGTGIYLEDVDQAIAQVHDEASNGIHATMLAIAGVALVAVLLVFAGGLALNLSEHRLADRKLQLLTQRIVSLQEEERSRVSRELHDGISQLLASIKFQFELASLELASGNEQGLDTLHKGTERLAGAIGEVRRISHDLHPSLLDTLGLPAAIAQLVAEFEQRSGLLIDYKNDLGDTLLNDGMAVALFRILQEALTNIERHAQANTVAISLDGRARRVRLRVRDDGVGFSSRHFDTLTGGIGLRNIRQRVEHFGGRFALTSQPGHTELMVTLPLPTP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0085 CDS 79640 80740 - TRAP dicarboxylate transporter- DctP subunit YP_001185591.1 146305126 5106270 PFAM: TRAP dicarboxylate transporter- DctP subunit Periplasmic[Class 3] PF03480|SBP_bac_7, Bacterial extracellular solute-binding protein, family 7|47|331|2e-58 COG4663|FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]. ATGAAACGTCGCGACATACTCGCCGCAGCCGGTGTTGGCCTGGCAGCCACCGCACTGGTGGGCTGCAAAGAAGAGGCAAAAAGCGCCGCTGCGCCCCAAGAGGGCTCGAGTTCCCAGACCTTCAACTGGAAGATGGTCACCTCCTGGCCGAAGAACTTCCCAGGCGTCGGCGTCGGCGCCGAGCGCTTCGCCAAGCTCGTCGAGGAGATGAGCAACGGCCGTCTGAAGATCAAGGTCTACGCCGCCGGCGAGCTGGTTCCGGCGCTGGAAGTGTTCGATGCAGTCTCCCGCGGCACCGCCGAAATGGGTCACGGCGCGCCGTACTACTGGAAGGGCAAGGTCCCGGCCGCGCAATTCTTCTGCGCCTCGCCGTTCGGTCCCAACGCCCAGGAAATGAACGCCTGGCTGCACCGCGGCGGCGGTCAGCAGCTGTGGGAAGAGGTGTACAAGCCGTTCGGCGTCCTGCCCATGGCCTGCGGCAACACCGGCGTGCAGACCGCCGGCTGGTTCAACAAGGAAATCAACTCGGTCGACGACTTCAAGGGCCTGAAGATGCGCACCCCCGGCCTGGGCGGCGAAGTGCTGACCAAGATGGGCGGTACCGTGGTCAACATGCCGGCCGGCGAGATCTTCACTGCCATGCAGACCGGCGCCATCGACGCCACCGAGTGGATCGGCCCGTACAACGACCTGGCCCTGGGTCTGCACAAGGCTGCCAAGTACTACTACACCCCGGGCTGGCAAGAGCCGAGCGTACTGTTCGAGCTGGACGTCAACCTCAAGGCCTGGGACACCCTGCCGGCCGACCTCAAGGCCATCGTTCGTGCCGCCGCTCGCGACGTCAACGGCGACATGCTCGACGACTACAACGCCAAGAACATGGAAGCCATGGAACAGCTCAAGGCCGATGGCGTGGAAGTCCGCCGCCTGCCGGACGAAGTCCTGGCCCGCCTGAAGGAAGTGGCAGCCGAGGTGGTCGATGCCAGCGCCGCGGCCGACCCGGCAGCGAGCAAGGTCTGGGAACACCAGAAGGCCTACCTCAAGCGCCTGTACGAATACGCCGAAAGCAACGAGAAGGACATCTACAACATCCGCGGCTGA MKRRDILAAAGVGLAATALVGCKEEAKSAAAPQEGSSSQTFNWKMVTSWPKNFPGVGVGAERFAKLVEEMSNGRLKIKVYAAGELVPALEVFDAVSRGTAEMGHGAPYYWKGKVPAAQFFCASPFGPNAQEMNAWLHRGGGQQLWEEVYKPFGVLPMACGNTGVQTAGWFNKEINSVDDFKGLKMRTPGLGGEVLTKMGGTVVNMPAGEIFTAMQTGAIDATEWIGPYNDLALGLHKAAKYYYTPGWQEPSVLFELDVNLKAWDTLPADLKAIVRAAARDVNGDMLDDYNAKNMEAMEQLKADGVEVRRLPDEVLARLKEVAAEVVDASAAADPAASKVWEHQKAYLKRLYEYAESNEKDIYNIRG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0086 CDS 80925 81467 + tripartite ATP-independent periplasmic transporter DctQ YP_001185592.1 146305127 5106271 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component Cytoplasmic Membrane[Class 3] PF04290|DctQ, Tripartite ATP-independent periplasmic transporters, DctQ component|32|165|8e-11 COG4665|FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component [Secondary metabolites biosynthesis, transport, and catabolism]. ATGCCCAATCCCCCCCCTTTACTTGGGTTGGCACGCTTCATCGATGCGTGCAACGCCCTATTCGGCAAGGCCTGCGCCTGGCTCACCCTGTTTCTGGTAATCGGCACCGCCATCGTCGTGGTACTGCGCTACGGCTTCGGTATCGGCGCGACGGCGCTGCAGGAGGCCGTGCTCTACGCCCATGCGCTGGTATTCATGGGCGCTGCGGCCTGGGTGCTGCAGCGTAACGGCCATGTGCGCGTGGACATCTTCTTCCAGAAATTCAGCGGTCGCCGTCAGGCGTTGGTGGAAATTCTCGGCACCCTGCTGTTTCTGTTGCCGGTCGCGCTGTTCCTCGGCTGGGCCAGCTGGGACTACGTGAGCAACTCCTGGGCGACCCGCGAGGCGTCGGGGGAGTCCGGCGGTCTGAAGTTCGTCTACCTGCAGAAGAGCATCATCCTGGTGCTGGTGGTCAGCCTGGCGCTGCAGGGCGTTTCCAATCTGATCAAGGCGCTCTACGTCATCAGCGGTCGCCTGCCGGCTCCGGAGGTGAAACATGGCTGA MPNPPPLLGLARFIDACNALFGKACAWLTLFLVIGTAIVVVLRYGFGIGATALQEAVLYAHALVFMGAAAWVLQRNGHVRVDIFFQKFSGRRQALVEILGTLLFLLPVALFLGWASWDYVSNSWATREASGESGGLKFVYLQKSIILVLVVSLALQGVSNLIKALYVISGRLPAPEVKHG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0087 CDS 81460 82836 + TRAP dicarboxylate transporter, DctM subunit YP_001185593.1 146305128 5106272 TIGRFAM: TRAP dicarboxylate transporter, DctM subunitPFAM: TRAP C4-dicarboxylate transport system permease DctM subunit ; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit Cytoplasmic Membrane[Class 3] biological_process|GO:0015740|C4-dicarboxylate transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; cellular_component|GO:0031317|tripartite ATP-independent periplasmic transporter complex|IEA ; molecular_function|GO:0015556|C4-dicarboxylate transmembrane transporter activity|IEA TIGR00786|dctM|TRAP transporter, DctM subunit|subfamily|2.3e-111||Transport and binding proteins|Carbohydrates, organic alcohols, and acids PF06808|DctM, DctM-like transporters|10|447|2e-53 COG4664|FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component [Secondary metabolites biosynthesis, transport, and catabolism]. ATGGCTGAGTTGATGGCGATTCTGCTGTTCGTCAGCATCTGCCTGGCGCTGATGGCCGGTTATCCGGTGGCCTTCACCCTGGCCGGGGTGTCTCTGCTGTTCGCCGGCATCGGCGTGCTCACCGGTACCTTCGATGCCGGATACCTGAGTGCCCTGCCCAACCGCCTGTTCGGCATCATGAACAACCAGACCATGCTGGCCGTGCCGCTGTTCGTGTTCATGGGGGTGATGCTGGAACGCTCGCGAGTGGCCGAGGATCTGCTCGAGTCCATGTCGCGCCTGTTCGGCACCCTGCGTGGCGGTCTGGCGATTTCCGTGTGCGTGGTCGGCGCCCTGCTGGCCGCTTCCACTGGCATCGTCGGTGCCACCGTGGTGACCATGGGCCTGCTGGCGCTGCCGACCATGCTGCGCCGCGGCTATGATCCGGCCATTTCCACCGGCACCCTGGCGGCTACCGGCACGCTGGGCCAGATCATCCCGCCGTCCATCGTCCTGGTGCTACTCGGCGACGTGATGTCCAGCGCCTATCAGCAGGCGCAGCTGAAGATGGGCATCTTCTCGCCGAAGACCGTCTCGGTCGGCGACCTGTTCGTCGGCGCCCTGCTGCCCGGTCTGCTGCTGGTCGGCCTGTACATCCTCTATATCGTCGGCACCGCGATCTTCCAGCCGAAGAAGCTGCCGGCGCTGCCGCAGGAAGAGCTGGGGCCGATCGAGTGGGGCAAGCTGATCAAGGCGCTGGTACCGCCGCTGATCCTGATCGGCGCGGTGCTCGGCTCGATCCTCGCCGGCTATGCCACGCCCACCGAGGCCGCGGCATTGGGCGCCGTGGGTGCGATGCTGCTGGCGGCGAGCAAGGGCAAGCTGAATTTCGGCCAGCTCAAGGAAGTGGCCTACGGCACCACCGAGATCAGCGCCATGGTCTTCATGATCCTGATCGGCGCCTCGCTGTTCTCCCTGGTATTCCGCGGTTTCGGCGGCGAGCACATGATCGAGGAAGTGTTCGCCCAGCTGCCGGGCGGCGTGCTTGGCGCCTTCTTCCTGGTGATGCTGGTGATCTTCCTGCTCGGCTTCATCCTCGACTTCATCGAGATCACCTTCGTGGTGGTGCCGATCGTCGGGCCGGTGCTGCTGGCCATGGGGCTCGACCCGATCTGGCTCGGCGTGATGATCGCGCTGAACCTGCAGACCTCCTTCCTCACCCCGCCGTTCGGCTTCGCACTGTTCTACCTGCGCGGGGTGACGCCGGCATCGGTGGCCACCAGCACCATCTACAAGGGTGTGGTGCCGTTCATCCTGATCCAGATCCTGCTGCTGGTGATCGCCTACATGTTCCCGGGGCTGATCACCTGGCTGCCGGAACAGGTCTACGGCAAGTAG MAELMAILLFVSICLALMAGYPVAFTLAGVSLLFAGIGVLTGTFDAGYLSALPNRLFGIMNNQTMLAVPLFVFMGVMLERSRVAEDLLESMSRLFGTLRGGLAISVCVVGALLAASTGIVGATVVTMGLLALPTMLRRGYDPAISTGTLAATGTLGQIIPPSIVLVLLGDVMSSAYQQAQLKMGIFSPKTVSVGDLFVGALLPGLLLVGLYILYIVGTAIFQPKKLPALPQEELGPIEWGKLIKALVPPLILIGAVLGSILAGYATPTEAAALGAVGAMLLAASKGKLNFGQLKEVAYGTTEISAMVFMILIGASLFSLVFRGFGGEHMIEEVFAQLPGGVLGAFFLVMLVIFLLGFILDFIEITFVVVPIVGPVLLAMGLDPIWLGVMIALNLQTSFLTPPFGFALFYLRGVTPASVATSTIYKGVVPFILIQILLLVIAYMFPGLITWLPEQVYGK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0088 CDS 82941 83843 + Aldose 1-epimerase YP_001185594.1 146305129 5106273 PFAM: Aldose 1-epimerase Cytoplasmic[Class 3] PF01263|Aldose_epim, Aldose 1-epimerase|22|294|1e-30 COG0676|COG0676, Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]. ATGAGCAATACCCAAGTCGAACGTGTGGAACTGGATCAACTGATCTGCTGGCGCATTCGCACCCAGCGCAGCGAGCTGCTGGTGGCCCAGCAGGGCGCGCAGATACTCGCCTACCAGCGCGACGGCCAGCCGCCGCTGATCTGGCTCAGCCCCGAGGCCGCCTATCAGCGCGCGCAGAGCGTGCGTGGCGGGGTGCCGATCTGCTGGCCCTGGTTCGGCGACCTGCGGCGCAATCCCCAGGCGGTGCAGGCGCACTACCAGCAGGTCGAAGCGCCTGCCCATGGTCTGGTGCGCGGGCTGGACTGGCAGCTGCTGGGCATCGACGAGGAGGGCGAGCAGGTGACGCTGCGGTTCGCCTTCGATACGCAGAGGGAGCCGCTGGCGGGCTGGCCGCATGCGGCACTCCTGCAGTTCGAGATTCGTCTGGCGGACGATCTGGCCATGAGCCTGCAGACCCACAACCGTGGGGAAGCGCCCTTGACCCTGAGCCAGGCCCTGCATACCTACTTCGCCGTCAGCGACGTGCGCCAGGTCAGCGTCGATGGCCTGCAGGGCTGCCGCTACGTCGACACGCTGCAGGACTGGCGAGAGCTGCGGCAGGATGCCGAATTGCGCTTCGTCGGCGAGACCGACCGCATTTATATGGACACGCCGGCCCGCCTGAGCATCGTCGATCCGGGCTGGGGGCGGCGCATTCACCTCGATTGCAGCGGCTCGCGCTCGGCCGTGCTGTGGAATCCCTGGGTGGACAAGGCCAGGCGCCTTTCACAGTTCCCGGATGACGCCTGGCAAAACATGCTGTGCATCGAGACCGCCAACCTGCTGGAGGATGTGGTGCAGGTGAAACCCGACGAATGGCACCGCCTCGATCTGCGGCTTTCCAGCGACTCGTTCGGGCACTGA MSNTQVERVELDQLICWRIRTQRSELLVAQQGAQILAYQRDGQPPLIWLSPEAAYQRAQSVRGGVPICWPWFGDLRRNPQAVQAHYQQVEAPAHGLVRGLDWQLLGIDEEGEQVTLRFAFDTQREPLAGWPHAALLQFEIRLADDLAMSLQTHNRGEAPLTLSQALHTYFAVSDVRQVSVDGLQGCRYVDTLQDWRELRQDAELRFVGETDRIYMDTPARLSIVDPGWGRRIHLDCSGSRSAVLWNPWVDKARRLSQFPDDAWQNMLCIETANLLEDVVQVKPDEWHRLDLRLSSDSFGH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0089 CDS 84279 85841 + ImpA domain-containing protein YP_001185595.1 146305130 5106274 PFAM: ImpA domain protein Cytoplasmic[Class 3] TIGR03362|VI_chp_7|type VI secretion-associated protein, VC_A0119 family|hypoth_equivalog|1.3e-155||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF06812|ImpA-rel_N, ImpA-related N-terminal|55|113|5e-14 COG3515|COG3515, Uncharacterized protein conserved in bacteria [Function unknown]. ATGACGTACTCCAGCAAGCTCACCGCTCATTATCTCAATCTGGCTAAATCCCCTATTAATGAAGGGAACTTCGCCGGTGAAGACGTGCGTTATTCCAGCGAATACGAAATGCTGGAAACCGAGCTGGGCAAGGCCTCCTCGCTGCATGAAACCGGCGCCATCGACTGGCAGAAGGTGCGCGAGGGCAGCGAGAACCTGCTGACCACCCAATCCAAGGATCTGCGCGCCGCCACCTGGCTGACCTGGGGCCTGTTCCAGCGCGAATCCTTCGCCGGCCTGCAGGCCGGTCTGAACCTGCTGCACTACCTCTGCGAACACCACTGGCACGAGCTGCACCCGCGCAAGGCGCGGACCCGCACCGCCGCCATCAACTGGCTGCTGCCGCGCCTGGAACAGGCGCTGGCCGAACACGTGCCGATCAGCGAGCAGCTGCCGCTGTTTCGCCGTCTGGCCGAACACCTGCACGGTCTGGAAGCCGCCCTGTCGAGCCACCTCGGCGAGGACTCGCCGCTGCTGCTGCCGTTGTGCCGCCGCCTCGACGAGCAGATCAAGCGGGCCAGCCAGGGCCAGGCCGAGCCGGGCGCAGTCGGCGCCGCCATTGCCCAGGTCAAGCAGGTCGCCACCCAGATCATCACCGGCAGCGGTCCCATCGAAAGCGAGAAGGATGCCCACAAGGCCCTGCGCAGCCAGCAGGACGCCGCCCGCCCGCTGTGCGCCTGGTGGCTGAAGAACAAGGCCACCGACCTCAAGCCGCTGCGCCTGGCGCGTACCCTGCTGTGGCTGCCCATCGAGTCGCTGCCCGAGCGCAACGCCGAACAGATCACCGCCCTGCGCGGCCTGCCGGCCGACAAGCTGGCCTCCTACAAGGAACGTTTCGCCCAGGGCGCCTACGCCGACCTGCTCGCCGATCTGGAAGCCAGCATCGCCCGCGCGCCGTTCTGGCTCGATGGCCAGCGCCTGGTCTGGGAATGCCTGCAGGAGCTCAAGGCCGAGCAGGCCATGCGCGAAGTGGAAATCCAGCTCGCCCTGTTCCTGCAGCGCGTGCCCGGCCTCGACGAGCTGCGCTTCCATGACGGCGTGCCCTTCGCCGATGCCGAGACCCGTGCCTGGATCGGTGCCCATGTGCTGCCGCACCTGCAGGCCCCGGAAGTGGAGAAGAAGCCTGCCGCCAGCGAGCAGGGCGCCACGCCGCCCTGGGAAGAGGCGCTGCAGCAGGTGCTGCCCGGCCTGCGCAAGGACGGCCTGAAGGCCGCCGTGCAGCAGCTCAAGCAGGGCATGTCGCGCGCCCGTGGCGGCCGCGAACGCTTCTTCTGGCAACTGACCCTGGCCCGCCTGTGCTTCGCCGCGAAGAAGTACGACCTGGCCAAGACCCAACTCGAATCGCTCGACCAGACGCTGCAGGCCGCCGGCCTCGGCGAGTGGGAACCCGATCTCGCCCTGGACGTGCTGCGCCTGCTGCACCACTGCTGCGAGCTGCTGCCGCAGAACCATGCGGTGCGCGACAGCAAGGACGAGATCTATCGCAGGTTGTGCCACCTCGATCTCGAGGTGGTGCTGGAGTAA MTYSSKLTAHYLNLAKSPINEGNFAGEDVRYSSEYEMLETELGKASSLHETGAIDWQKVREGSENLLTTQSKDLRAATWLTWGLFQRESFAGLQAGLNLLHYLCEHHWHELHPRKARTRTAAINWLLPRLEQALAEHVPISEQLPLFRRLAEHLHGLEAALSSHLGEDSPLLLPLCRRLDEQIKRASQGQAEPGAVGAAIAQVKQVATQIITGSGPIESEKDAHKALRSQQDAARPLCAWWLKNKATDLKPLRLARTLLWLPIESLPERNAEQITALRGLPADKLASYKERFAQGAYADLLADLEASIARAPFWLDGQRLVWECLQELKAEQAMREVEIQLALFLQRVPGLDELRFHDGVPFADAETRAWIGAHVLPHLQAPEVEKKPAASEQGATPPWEEALQQVLPGLRKDGLKAAVQQLKQGMSRARGGRERFFWQLTLARLCFAAKKYDLAKTQLESLDQTLQAAGLGEWEPDLALDVLRLLHHCCELLPQNHAVRDSKDEIYRRLCHLDLEVVLE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0090 CDS 85896 86402 + hypothetical protein YP_001185596.1 146305131 5106275 PFAM: uncharacterised conserved protein UCP028301 Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03358|VI_chp_5|type VI secretion protein, VC_A0107 family|hypoth_equivalog|1.5e-71||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF05591|DUF770, Protein of unknown function (DUF770)|4|161|2e-47 COG3516|COG3516, Uncharacterized protein conserved in bacteria [Function unknown]. ATGGCCAAAGAAGGCTCGGTAGCCCCCAAGGAACGCATCAACGTCACCTTCAAACCCGCCACCGGCGGCGCCCAGGAAGAAATCGAACTGCCCCTGAAGCTCATGGTGCTCGGCGATTTCACCCAGCGTGCCGACGATCGCAAGATCGAAGACCGCAAGCCCATCAGCATCGACAAGAACAGCTTCGACGAAGTGCTGGCCAAGCAGGAACTGAACCTGACCTTCGCCGTGCCGAACCGTCTGCAGGACGAGCAGACCGATGACGAGCTGGCCGTGCAGCTGCGCATCAACTCCATGAAGGACTTCAACCCCGCCAACCTGGTCGAGCAGGTACCGGAGCTGAAGAAGCTGATGGAACTGCGCGACGCCCTGGTCGCCCTCAAAGGCCCGCTGGGCAACGCCCCGGCCTTCCGCAAGGCGATCGAAAGCGTGCTCTCCGACGACGACTCGCGCGATCGCGTGCTCGGCGAACTGGGCCTGGCCGCCAAAGACAAGCTGGATTCCTGA MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLMVLGDFTQRADDRKIEDRKPISIDKNSFDEVLAKQELNLTFAVPNRLQDEQTDDELAVQLRINSMKDFNPANLVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIESVLSDDDSRDRVLGELGLAAKDKLDS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0091 CDS 86428 87906 + hypothetical protein YP_001185597.1 146305132 5106276 PFAM: protein of unknown function DUF877 Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; cellular_component|GO:0033104|type VI protein secretion system complex|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03355|VI_chp_2|type VI secretion protein, EvpB/VC_A0108 family|hypoth_equivalog|0||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF05943|DUF877, Protein of unknown function (DUF877)|65|490|0.0 COG3517|COG3517, Uncharacterized protein conserved in bacteria [Function unknown]. ATGAGCACGACTAGCGCAGCCGTAGAAAGCAGCCACAGCGCCGCCGAACTCGGCATTCTCGACCGCATCATCGCCGAGACCAAACTGACCCCCGATGACGAGGCCTACGACATCGCCAAGCGCGGCGTATCGGCCTTCATCGAAGAGCTGCTCAAGCCGCAGAACGAAAACGAGCCGGTGAAGAAGGCCATGGTCGACCGCATGATCGCGGAGATCGACGCCAAGCTCAGCCGGCAGATGGACGAGATCCTCCACCACCCGGACTTCCAGGCCCTGGAATCCTCCTGGCGCGGTCTCAAGCTGCTGGTGGACCGCACCAACTTCCGCGAGAACATCAAGCTGGAGATCCTCAACGCCTCCAAGCAGGACCTGCTCGATGACTTCGAAGACAGCCCGGAAATCGTTCAGTCCGGCCTGTACAAGCACATCTACACCGCCGAGTACGGCCAGTTCGGTGGCCAGCCGGTCGGCGCCCTGATCGCCAACTACTACTTCGACCCGAGCGCTCCGGACGTCAAGACCCTGCAGTACGTCGCCTCGGTGGCCTGCATGTCCCACGCCCCGTTCATCGCCTCGGCCGGCCCGAAATTCTTCGGCCTGGAAACCTTCACCGGCCTGCCGGACCTGAAGGACCTCAAGGACCACTTCGAAGGCCCGCAATTCACCAAGTGGCAGAGCTTCCGCGAGCAGGAAGACGCCCGCTACGTCGGCCTGACTGTACCGCGCTTCCTGCTGCGCAACCCGTACGATCCGGAAGACAACCCGGTGAAGACCTTCGTCTACAAGGAAAACGTGGCCAACAGCCACGAGCACTACCTGTGGGGCAACACCGCCTACGCCTTCGCCAGCCGTCTGACCGACAGCTTCGCCAAGTTCCGCTGGTGCCCGAATATCATCGGCCCGCAGAGCGGTGGCGCGGTGGAAGACCTGCCGCTGCACCACTTCGAGAGCATGGGCGAGATCGAGACCAAGATCCCCACCGAGGTGCTGGTTTCCGACCGTCGCGAATATGAACTTGCGGAAGAGGGCTTTATCGCCCTGACCATGCGCAAGGGCAGCGACAACGCCGCGTTCTTCTCCGCCAACTCGGCGCAGAAGCCGAAGTTCTTCGGCATCAGCGAAGAAGGCAAGACCGCCGAGCTGAACTACAAGCTGGGCACCCAGCTGCCGTACATGTTCATCGTCAACCGCCTGGCCCACTACCTGAAAGTGCTGCAGCGCGAGCAGATCGGCGCCTGGAAGGAGCGTACCGACCTCGAGCTGGAACTGAACAAGTGGATCCGCCAGTACGTGGCCGACCAGGAGAACCCCAGCTCCGAAGTGCGTAGCCGCCGTCCGCTGCGCGCCGCCCAGGTCATCGTCAGCGATGTCGAAGGCGAGCCGGGCTGGTACCGCGTCAGCCTGAACGTGCGCCCGCACTTCAAGTACATGGGTGCCGATTTCACCCTGTCGCTGGTCGGCAAGCTGGACAAGGAATAA MSTTSAAVESSHSAAELGILDRIIAETKLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLKLLVDRTNFRENIKLEILNASKQDLLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYYFDPSAPDVKTLQYVASVACMSHAPFIASAGPKFFGLETFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVPRFLLRNPYDPEDNPVKTFVYKENVANSHEHYLWGNTAYAFASRLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSAQKPKFFGISEEGKTAELNYKLGTQLPYMFIVNRLAHYLKVLQREQIGAWKERTDLELELNKWIRQYVADQENPSSEVRSRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFTLSLVGKLDKE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0092 CDS 87913 88341 + GPW/gp25 family protein YP_001185598.1 146305133 5106277 PFAM: GPW/gp25 family protein Unknown[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03357|VI_zyme|type VI secretion system lysozyme-related protein|hypoth_equivalog|5e-54||No Data|No Data PF04965|GPW_gp25, Gene 25-like lysozyme|23|122|7e-21 COG3518|COG3518, Uncharacterized protein conserved in bacteria [Function unknown]. ATGAACGGATACGGCAGCCTGTTCGAGCGTCTCGGTGGCGAGGCCGGCCAACGTGCCGGCTGGAGCCGCGAGGTCGCCGCCATGGCCTCGGTGGCTGCCCATCTGGCCAAGATGCTCAGCACCCGTGCGGGCAGCGTGCAGACGCTGCCCGACTACGGGCTGCCCGATTTGAACGATATGCGCCTGTCGCTGCACGACTCGCTGCAGCAGGCGCGTATCGCCATCGAACGCTTTATCGAAGCGTACGAACCCCGTCTGACCCAGGTGCGCGTGATTTCCCTGCCGCGCACCCATGATCCGCTGCGCCAGGCCTTTGCCATCGACGCGATGCTGGAGATGGATGGCGTCAGGCGTCAGGTCAGTTTCTCCGCGAGCCTGGACGGCAGCGGTCAGGTCAAGGTCAACCCAGGAGCCTCACATGTCCGGTAA MNGYGSLFERLGGEAGQRAGWSREVAAMASVAAHLAKMLSTRAGSVQTLPDYGLPDLNDMRLSLHDSLQQARIAIERFIEAYEPRLTQVRVISLPRTHDPLRQAFAIDAMLEMDGVRRQVSFSASLDGSGQVKVNPGASHVR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0093 CDS 88331 89776 + hypothetical protein YP_001185599.1 146305134 5106278 Unknown[Class 3] COG4104|COG4104, Uncharacterized conserved protein [Function unknown]. ATGTCCGGTAAACCCGCAGCCCGCCTCGGCGATCCCACCGCCTGCCCGATTCCCGGCCACGGCACCAACCCGATCGCCGCCGGCTCGCCCGACGTGCTGTTCGACAGTCTGCCCGCCGCGCGCATGGGCGATGCCTCCGCCTGCGGCGGCGCCATGGCCGGCGCGGTGATTCCCAACGTGCTGATCAACGGCAAGCCGGCGGCGGTAGTGGGCAGTGTGGGCAGTCATGGCAATACCGTGGTGGCTGGCTCCGGCACCGTGTTGATCGGCGCGAGTGGCGGTGGGGCGGCGTTCAGCCCGGTTGCGCCGCTGTCGCTGGTGGCTGCTGCAGCTAGCGTCATCAATGTTCTGGTGCCTCCGGCTCAAGCGGCCGAAGAGCGCGCGCTGGATTACACCATTGCTTTGCAGCGTGGAGGCAATCGTGTGCTCACGCCTCTGCGGATTCCCGATTACGAGGAAATTGGACAAGGCACAACGAACAATCGAGAGACCATCGATTTCCAGATCCGTAACCGCAAACAGCCGGCCGATAGCCTGACCCTGGAGGTATACGATGGCGAGACGCTGCTCCATAGCGAAGCGGATACAGCGGCGCTGCTTCCGACAGGTGAGCACCAGTGGCAGTGGGACGGCTACGACCGATCTGGCGTTCTCGATACTCGTGTTTTGAAAAGCCCCAACCTGCTTGTGCGTCTGACCGTGAAGAAAGGTGCTGAAGAGCAGGTATCGGAGCTGCGGCTGGACAATAGCGCTGCAGCCGCACCGTGGGTCGATGCCCGCGTTGATCGCAACGCTGGCTCCGTCGAGATCACCCTGCGCCCCAGCTTCTCTGATGGTGGTGTATCCGGCAGGAACAACCAATTGACGGCCCGCACATTCGATGAACTGAAGGTATTGGCCAAGGCGGGGGTCGAATACTACTGGTCGCGTGAGGGCAGTCGTGCAGGCGGCATCGACAAGCCGATTCAGACAGCCAAAGGCGCGTTTCAGGTGAAGGTCATCGCTGATGTGAATGCCAAGCCCAGCGCCAAGAATTTCCCGCTCATTGCTTCAATCGGTGATGACTTCGGTCGTTCCACTAGTTTCGCGATGTTCAAAAAGATTTACCACAACTTGGGCATGTGGGCGGCTGCCAACTATCCCGCCAATTTTGCCGATGAGGATTTCGCGCACACCGCTGCGCATGAGGTGGGTCACCTCATCCTCAACGAGTACGGCGATGGTGGCTTGATACCTGCGTACTCGTGGAGCCACAAGTCGACCTCCACGATCCTCACTCAGGCGCCTGTGGACAATCACCCCATTCCAGCGGCAGGGGAGATAGACCTTATGCATTACCACTCCCACAGCCCACGCAACTACCAGGACTATTGGCAGCGTTCCATCGCCTCGGAGAACGACGTCAAGGGCCTGTTGTGGCTTACCCGGGTGAAATTCGATGACTAA MSGKPAARLGDPTACPIPGHGTNPIAAGSPDVLFDSLPAARMGDASACGGAMAGAVIPNVLINGKPAAVVGSVGSHGNTVVAGSGTVLIGASGGGAAFSPVAPLSLVAAAASVINVLVPPAQAAEERALDYTIALQRGGNRVLTPLRIPDYEEIGQGTTNNRETIDFQIRNRKQPADSLTLEVYDGETLLHSEADTAALLPTGEHQWQWDGYDRSGVLDTRVLKSPNLLVRLTVKKGAEEQVSELRLDNSAAAAPWVDARVDRNAGSVEITLRPSFSDGGVSGRNNQLTARTFDELKVLAKAGVEYYWSREGSRAGGIDKPIQTAKGAFQVKVIADVNAKPSAKNFPLIASIGDDFGRSTSFAMFKKIYHNLGMWAAANYPANFADEDFAHTAAHEVGHLILNEYGDGGLIPAYSWSHKSTSTILTQAPVDNHPIPAAGEIDLMHYHSHSPRNYQDYWQRSIASENDVKGLLWLTRVKFDD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0094 CDS 89769 90155 + hypothetical protein YP_001185600.1 146305135 5106279 Unknown[Class 3] ATGACTAAGCACGTGCTGTGTCTACTTTCGATTCTGCTTGCTGGCTGCAGCAGCCAGCCGAAAAGCGTCTTTATCGCCAACTTCGAAAATGTGTGTGGCTACACGGTCGAAGTTTCCACCCATGACTACTCCAACGCAAAAGGCTCATTCCCTGCTGGACAGCGGCTGGCCGCTGACGACTCCATCGAGGTGCTGTCCTACATCGTGTTCAACGAAACACTGGAAGACAGCGTACCAGGCACTTATCGCCTGGATATCGCGGCACATGGCAAGTCGGTATCGCTCGACAAGCAGCGCCTGCTTGCTCATCTGAAGCGCTCGCCAATTGAACAAAAAGGCAATGCCATAACGATATGGACGATCAACGACACCTCTCTGTGTCCATAA MTKHVLCLLSILLAGCSSQPKSVFIANFENVCGYTVEVSTHDYSNAKGSFPAGQRLAADDSIEVLSYIVFNETLEDSVPGTYRLDIAAHGKSVSLDKQRLLAHLKRSPIEQKGNAITIWTINDTSLCP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0095 CDS 90186 91976 + hypothetical protein YP_001185601.1 146305136 5106280 PFAM: protein of unknown function DUF879 Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03359|VI_chp_6|type VI secretion protein, VC_A0110 family|hypoth_equivalog|6.1e-241||No Data|No Data PF05947|DUF879, Bacterial protein of unknown function (DUF879)|3|596|0.0 COG3519|COG3519, Uncharacterized protein conserved in bacteria [Function unknown]. ATGTCTTTTAACCACTACTACCAAAGCGAACTCACCGCCCTGCGCCAACTGGGCAAGCGCTTTGCCGAGCGCAGCCCGGCGCTGGCGCCGTTTCTTGGCCAGGCCGGGCGTGATCCGGATGTCGAGCGCCTGCTCGAAGGCTTCGCCTTCCTTACCGGGCGTCTGCGGCAGAAGCTCGACGACGAGCTTCCGGAGCTGACCCACTCGCTGATGCACCTGCTGTGGCCGAACTACATGCGTCCGCTACCGGCCTTCAGCATGCTCCAGTTCGACCCGCTGACCCGTCCCGGTCCGGCGTTGCCGGTCAAGCGCGGCACGCCGGTGGAGGCCAAGGCCATCGAGGGCGTCACCTGCCGCTTTCGCACCTGCTACCCCACCGAGGTGCTGCCGCTGGCGCTGAACGGCCTGGACTACTCGGTGAAGGGCGACGGCGCGCTGCTCAGCCTGCGTCTGGGCATGAGCGCCGACGGCCATCTCGGCGAGATCGGCCTGAACAAGCTGCGTCTGCACCTGGCCGGCGAGCGCTATATCGGCCAGATGCTCTACCTGGCGCTGCTGCGCAACCTCGGCGGCATCCAGCTGGTGCTGCTCGATGCCGCCGGCAAGCCCATGCAGGATGCCTTTGGCCAGACTCTCGGCACCTTGCAGCTCAAGCCCGAGCAGGTGCAGCCGGTGGGCTTCGCCGAGGACGAGGCGCTGATCCCCTATCCGCTCAACACCTTCCGCGGTTATCGCTACCTGCAGGAATACTTCGCCTTCCAGGACAAGTTCCTCTTCGTCGACCTGCTCGGCCTGGATGCCATCCACGGCCTGCCCGAGGATCTGCTCAAGCAGGCGCGCGGCCTGGAGCTGCGCTTCGATATCCACAAGGCCGGCGTGCAGCGCATCCGCCCGACCCTGGAAAACGTGCGCCTGTACTGCACCCCGGTGGTCAACCTGTTCCAGCACGACGCCATCCCGATCCGCCTCGACGGCAAGCAGGACCAGTACCTGCTGCTGCCGGCCGAATTCGACGCGCAGCACTGCGGCGTGTTCTCGGTGGACCGCGTCACCGGCTGGAAGCCGGGCGGCATGGGCTACGAGGAGTACGTGCCGTTCGAGTCGTTCGAGCACGACCCCAGCTTCGACGTGCCGGTGGCGCGCCCGCACTACAGCGTGCGTCAGCAGCCGTCGATGCTCGGCGACGGCCTGGAGACCTGGCTCAGCTTCGGTCTGCGCAACCTCGACCAGCACGAGACGCTGTCCATCGAGCTGACCTGCACCAACCAGAATCTGCCGCGTCAGCTGAGCCTGGGCGATATCTGCCTGCCCAGCGAGGACACCCCGGATTTTCTCAGCTTCCGCAACATCAGCGCGGTCACGCCTTGCTATGCGCCGCCGCTGCACCGCGACTTCCTGTGGAAGCTGATTTCCAACATGTCGCTGAACTACCTGTCGCTGGCCAACGTCGAGGCGCTCAAGGTGATCCTCGAGACCTACGACCTGCCGCGCTACTACGACCAGCACGCCGAGCGCGTCAGCAAGCGCCTGCTCGGTGGCCTCAAGAGCATCGGCCACCGCCATGTCGACCGCCTGCACCGCGGCCTGCCGGTACGCGGCGTGCGCACCGAACTGACCATGAACCCGGACGGCTACCTGGGCGAGGGCGACCTGTTCCTCTTCGCCTCGGTACTCAATGAATTTTTCGCCCTCTACGCCAGCCTCAACAGCTACCACGAGCTGCACGTACAGAGCACACAGGGAGAGTTGTACAAATGGACGCCACGCATGGGGCAGCAGCCCCTGCTCTGA MSFNHYYQSELTALRQLGKRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLDDELPELTHSLMHLLWPNYMRPLPAFSMLQFDPLTRPGPALPVKRGTPVEAKAIEGVTCRFRTCYPTEVLPLALNGLDYSVKGDGALLSLRLGMSADGHLGEIGLNKLRLHLAGERYIGQMLYLALLRNLGGIQLVLLDAAGKPMQDAFGQTLGTLQLKPEQVQPVGFAEDEALIPYPLNTFRGYRYLQEYFAFQDKFLFVDLLGLDAIHGLPEDLLKQARGLELRFDIHKAGVQRIRPTLENVRLYCTPVVNLFQHDAIPIRLDGKQDQYLLLPAEFDAQHCGVFSVDRVTGWKPGGMGYEEYVPFESFEHDPSFDVPVARPHYSVRQQPSMLGDGLETWLSFGLRNLDQHETLSIELTCTNQNLPRQLSLGDICLPSEDTPDFLSFRNISAVTPCYAPPLHRDFLWKLISNMSLNYLSLANVEALKVILETYDLPRYYDQHAERVSKRLLGGLKSIGHRHVDRLHRGLPVRGVRTELTMNPDGYLGEGDLFLFASVLNEFFALYASLNSYHELHVQSTQGELYKWTPRMGQQPLL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0096 CDS 91940 92947 + hypothetical protein YP_001185602.1 146305137 5106281 PFAM: protein of unknown function DUF1305 Unknown[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0008565|protein transporter activity|IEA TIGR03347|VI_chp_1|type VI secretion protein, VC_A0111 family|hypoth_equivalog|7.2e-118||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF06996|DUF1305, Protein of unknown function (DUF1305)|16|321|6e-90 COG3520|COG3520, Uncharacterized protein conserved in bacteria [Function unknown]. ATGGACGCCACGCATGGGGCAGCAGCCCCTGCTCTGAACCGGCTCAGCCGGGGCATCCGCGAGTACAGCCTGTTCCAGGCCGTACAGCTGGTGCTGGAGCGCCTCAAGGTTGCCCATCCGCAACTGGATGACGAGCGCCTCTACGAGTACCTGGAATTCCAGGCCAACCCGAGCCTGGGTTTCCCCGGCAGCGATATCGATCGCGTGCAGTTCTTCGAGGAGCACGGCGAGCTGCGCGCGCGCATGCGCGTCAACCTGGTCGGCCTGTTCGGCGGCGGCTCGCCGTTGCCGGCCTTCTACAGCGAACAGGCCCTGGGTGACAGCGAGGACGGCAACCCGACCCGCGACTTCCTCGACCTGTTCAACAACCGTCTGCAGCGCCTGTTGCTGCCGATCTGGCAGAAGTACCGCTACCGCGCCAGCTTCCAGAGCGGGGCGATGGACGCCTTCTCCGCGCACCTGTTCGCCCTGATCGGCCTGGGCAGCGAGCAGATCCGCCAGGCCCAGGAGCTGAACTGGAAGCGCCTGCTGCCCTACCTCGGCCTGCTCAGCCTGCGTGCCCACTCGGCAGCGCTGATCGAGTCGGTGCTGCGTTACTACTTCAAGCACGCCGAGCTGTTCATCGAGCAGTGTCTGGAGCGCCAGGTGGTGGTGCTGGAAGAGCAGCGCAACCGCCTCGGCCGCGCCAACAGCCTGCTCGGCGAAGACACCGTGCTCGGCGAGCGCGTCCGCGACCGCGGCGGCAAGTTCCGCATCCACGTGCGCCAGCTGGGCTGGACGCGCTTTCACGAGTTCCTGCCGATCGGCACGGGTTACCAGCCGCTCTGCGCGCTGGTGCGCTTCACCCTGCGCGATCCGCTGGACTACGACATCCGCCTGGAGCTGCGTCAGGACGAAATCCGCGACCTGCGCATCGGCGAAGGCAACCCCTGCCTGCTGGGCTGGACCACCTGGCTCGGCCGTGAGAACGCCGACGGTCTGGTCACCCTCGGCAGCAAGATTCATTAA MDATHGAAAPALNRLSRGIREYSLFQAVQLVLERLKVAHPQLDDERLYEYLEFQANPSLGFPGSDIDRVQFFEEHGELRARMRVNLVGLFGGGSPLPAFYSEQALGDSEDGNPTRDFLDLFNNRLQRLLLPIWQKYRYRASFQSGAMDAFSAHLFALIGLGSEQIRQAQELNWKRLLPYLGLLSLRAHSAALIESVLRYYFKHAELFIEQCLERQVVVLEEQRNRLGRANSLLGEDTVLGERVRDRGGKFRIHVRQLGWTRFHEFLPIGTGYQPLCALVRFTLRDPLDYDIRLELRQDEIRDLRIGEGNPCLLGWTTWLGRENADGLVTLGSKIH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0097 CDS 92959 95559 + ATPase YP_001185603.1 146305138 5106282 PFAM: AAA ATPase, central domain protein ; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase Bacterial secretion system [KEGG] Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; cellular_component|GO:0033104|type VI protein secretion system complex|IEA ; molecular_function|GO:0042623|ATPase activity, coupled|IEA TIGR03345|VI_ClpV1|type VI secretion ATPase, ClpV1 family|equivalog|0||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF10431|ClpB_D2-small, C-terminal, D2-small domain, of ClpB protein|776|862|1e-05 ; PF07728|AAA_5, ATPase family associated with various cellular activities (AAA)|604|731|2e-07 ; PF07724|AAA_2, ATPase family associated with various cellular activities (AAA)|600|766|8e-67 ; PF00004|AAA, ATPase family associated with various cellular activities (AAA)|206|387|1e-09 COG0542|ClpA, ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones]. ATGATCAACGTCGACCTGCAACAACTGGTTCAAGCTCTGGACGCCGCGAGCAAGCGCGACCTGGAGATGGCCGCCGAACGCTGCGTGGTACGCGGCGGCAACAAGATCCTCGTCGAGGACCTGCTGCTGGGTCTGCTCGAGCGCCCGGAAAGCCTGCTGGCGCGTGCCCTGCAGGATGCCGAGATCGATGCCGGCGAGCTGGCCCAGGCGCTGCAGCCGCGCGGCGAGCACAGCGAGTCGCGCAACCCGGTGTTTTCTGCCGAACTGGTGCAGTGGCTGCAGGACGCCCTGCTGGTGGCCAACCTGGAGCTGGGCGCCAGCCAGATCGACCAGGCCGCGCTGATCCTCGCCCTGCTGCGCAACCCCATGCGCTACGCCGGCAGCCGTTATCAGACGCTGCTGAGCAAGCTCAATGCCGAGCGTCTGCGCGACTTCGCCCTTAGCCAGCAGCCGCAGGCCGCGGGCGGCAAAGCGGCGGCGCCGGGCGAGTCGAACCTGGCGCGCTTTACCCACAACTTCACCCAGCAGGCCCGCGACGGCAAGCTCGATCCGGTGCTGTGCCGCGACGGCGCGATCCGCCAGATGGTCGATATCCTCGCCCGCCGGCGCAAGAACAACCCCATCGTGGTCGGCGAGGCCGGGGTGGGCAAGACCGCCATCGTCGAGGGCCTGGCCCTGCGCATCGCCACCGGCGAGGTACCGCAGGTGCTCAAGGGCGTCGAGCTGCTGTGCCTGGACCTCGGCCTGCTGCAGGCCGGCGCCAGCGTCAAGGGCGAGTTCGAGCGCCGCTTGCAGGGCGTGATCGACGAGGTCAAGGCCTCGCCCAAGCCGATCATCCTGTTTATCGACGAGGCCCATACGCTGATCGGGGCCGGTGGCCAGGCCGGCAGCGGCGATGCCGCCAACCTGCTCAAGCCGGCGCTGGCCCGTGGCGAGCTGCGCACCATCGCCGCCACCACCTGGAGCGAATACAAGAAGTACTTCGAGAAGGACCCGGCGCTGGCCCGTCGCTTCCAGCCGGTGCAACTGCACGAGCCGACCGTCGACGAGGCGGTGACCATCCTGCGCGGCCTGGCGCCGGTGTACGAGAAGAGCCACGGCATCTACCTGCGCGACGACGCCGTGGTCGCCGCCGCCGAGCTGTCGGCGCGCTACCTGGCCGGTCGCCAGTTGCCGGACAAGGCGGTGGACGTACTCGACACCGCCTGCGCCCGCGTGCGCATCAGCCTGGCCGCCGCACCCGAGGCGCTGGAGCGCCTGCGCGGCGAGATCGCCGAGGGCGAGCGCCAGGGCGAGGCCATGCGCCGCGACCTGGACGCTGGCCTGAGCATCGACGGCGAAGCGCTGGATGCCCTGGAAACCCGCCTGGTCGCCGCGCGCGCCGAACTGGAGCAGGTGGAAACCCGCTGGGCGATCCAGCGCGACCTGGCCGAGCGCCTGCTCGAGCAGCGCAAGCAGTGCGCCGCGGCGCGTCTTGCTGGCGACGCAGAGGAAACCGACGAGCCACGTGCCAGCCTGGAGGAACTGGAAGCCGAGCTGCGCGCCCTCCAGGCCGAGCTGGCCGCGGCTCAGGCCAGCGAGCGCCTGGTCAGCTTCGAGGTCTGCCCGCGCCTGGTGGCCGAGGTGATCAGCCACTGGACCGGCGTGCCGCTGAGCCAGCTGGCGCGCGAGCACAACACCAAGGTCATCACCTTCGCCGACGACCTGCGCCAGCGCGTGCGCGGCCAGGAGCAGGCGATCCAGGCGCTGGACAAGGCCATGCGCGCCACCGCTGCCGGCCTCAACCGGCCCGATGCGCCAGTGGGCGTGTTCCTCCTGGTCGGCCCCAGCGGCGTCGGCAAGACCGAGACCGCCCTGGCCCTGGCCGACCTGCTGTATGGCGGTGAACGCTTCCTCACCGTGATCAACATGTCCGAGTTCCAGGAAAAACATACCGTCTCGCGTCTGATCGGCGCGCCGCCCGGCTACGTCGGCTACGGCGAAGGCGGCATGCTCACCGAAGCCGTGCGGCAGAAGCCCTACTCGGTGATCCTCCTCGACGAGGTGGAGAAGGCCGACCCCGACGTGATGAACGTCTTCTACCAGATCTTCGACAAGGGCGTGGCCAACGACGGCGAAGGGCGCGAGATCAACTTCCGCAACACCCTGATCCTGATGACCAGCAACCTGGCCAGCGAACGCATCGCCAGCCTGTGCGCCGGTGGTGAGCGCCCGGGGGCCGAGGACCTGGAGCTGGCCATCCGCCCGCAACTGACCCAGCACTTCAAGCCGGCCCTGCTCGGCCGTATGCGCGTGGTGCCCTACTACCCCATGGACGGCGACCTGCTGCGCCAGCTGGTCGGCCTCAAGCTGGCCCGTTTCGGCGAGCGCCTGGCCCGTCGCCAGCTCGCCTTCAGCCACTGCGACGGCCTGGTCGAGCACCTGGCCGAGCGCTGTACCCATGGCGACAGCGGCGCCCGTCTGATCGACCACCTGATCGACCAGCACCTGCAGCCGCTGGTGGTCGACCGCCTGCTCGACGCCATGGCGAGCGGCGAGACCTTGCAGCAGGTACGCGCCACCCTGAACGGTGAAGGAACGGTGGTCTGTGAGTTCGCTTAA MINVDLQQLVQALDAASKRDLEMAAERCVVRGGNKILVEDLLLGLLERPESLLARALQDAEIDAGELAQALQPRGEHSESRNPVFSAELVQWLQDALLVANLELGASQIDQAALILALLRNPMRYAGSRYQTLLSKLNAERLRDFALSQQPQAAGGKAAAPGESNLARFTHNFTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIATGEVPQVLKGVELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFIDEAHTLIGAGGQAGSGDAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPTVDEAVTILRGLAPVYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPEALERLRGEIAEGERQGEAMRRDLDAGLSIDGEALDALETRLVAARAELEQVETRWAIQRDLAERLLEQRKQCAAARLAGDAEETDEPRASLEELEAELRALQAELAAAQASERLVSFEVCPRLVAEVISHWTGVPLSQLAREHNTKVITFADDLRQRVRGQEQAIQALDKAMRATAAGLNRPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMTSNLASERIASLCAGGERPGAEDLELAIRPQLTQHFKPALLGRMRVVPYYPMDGDLLRQLVGLKLARFGERLARRQLAFSHCDGLVEHLAERCTHGDSGARLIDHLIDQHLQPLVVDRLLDAMASGETLQQVRATLNGEGTVVCEFA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0098 CDS 95546 97078 + Fis family transcriptional regulator YP_001185604.1 146305139 5106283 PFAM: sigma-54 factor, interaction domain-containing protein ; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase Cytoplasmic[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006808|regulation of nitrogen utilization|IEA ; molecular_function|GO:0000156|two-component response regulator activity|IEA ; molecular_function|GO:0003677|DNA binding|IEA TIGR01818|ntrC|nitrogen regulation protein NR(I)|equivalog|7.5e-68||Central intermediary metabolism | Regulatory functions | Signal transduction|Nitrogen metabolism | DNA interactions | Two-component systems PF00158|Sigma54_activat, Sigma-54 interaction domain|203|424|1e-107 ; PF02954|HTH_8, Bacterial regulatory protein, Fis family|462|503|8e-08 COG3604|FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms]. GTGAGTTCGCTTAACCCCTCGCTGATGTTCAGCCAGATCCCCCAGCCGCTGCGCTATGCCGAGGCGCTGTTGCAGCGCTTCGCCCAACTGGCCCGCCATGCCAGCGCCGACGCTCTGCTCGGCGGGCTGGTGGAAGCCGCCGCGCAGCTGTCTGCCAGCGAGCTGAGCCAGCTGTACCTGCTCGACGCCACCCACACCCGCCTGACCCTCAGCGCCGAGTGGCAGGACGGCCAACTGCAACGCCGTGCCGAGGCCAGCCTGCCCAGCGACTATGACGGCGAACAGTTGCTGCAGTACTGCCTGTGCCAGAACCAGCTGCTCAGCCTCACCGAGCTGGATAGCAGCCTGCACAGCATCGGCTTCCTCCCGGAAAGCGGCCAGCCCTGGCGCAGCCTGCTGTGCCAGCCGCTGTTGGACGAACACCGGCAGGTCAATGGCTTGCTCCTCATCGCCAGCCACAAGCCCCGCGAGCTGCAGGGCTTCGCCGGATCCCTGGGTCAGCTCGGCGGCTTCGCCATTGCCCAGTTGCACCTGCTGCAGCGCCTGCGAGCACCGCAGAGCGAGGCCGCAACACAACCGACTCCAAGCTGCGCCAGCGGCTACGGTCTGATCGGCGACAGCCCGGCGATGCGCAACGTGTACCAGCTGATCGGCAAGGTCCTGCACAACTCGGTCAGCGTTTTGCTGACGGGCGAAACCGGTACCGGCAAGGAGCTGGTGGCGCGTGCTATCCATGACTGTGGCTCCCGTCGCAGCAAAGCCTTCGTGGTGCAGAACTGCGCCTCGTTGCCGGAAAACCTGCTGGAAAGTGAGCTGTTCGGCTACCGCAAGGGCGCCTTCAGCGGCGCCGACCGCGACCATCAGGGCCTGTTCGATGCGGCCAATGGCGGCACCCTGTTCCTCGATGAAATCGGCGATATGCCGCTGAGCCTGCAAGCCAAGCTGCTGCGCGTGCTGCAGGAGGGTGAAGTGCGCCCGCTCGGTTCGACCCGCACGCACAAGGTCGATGTGCGCATCGTCTCGGCCACGCACCACAATCTGCGCAGCCTGGTCGAGGAAGGCCGCTTTCGCGAAGACCTGTTCTATCGCCTGTCGCACTTCCCCATCGAGCTGCCGCCACTGCGCGCCCGCGGTGAGGACATCCTGCGCCTGGCGCGGCACTTCGCCGTCGAGGCCGCGTGCTTCCTGCAGCGCGATGCCTATCGCTGGTCGGAAGCGGCGCTGGAGCACCTGGCCGGTTACGCCTTCCCCGGCAACGTGCGCGAACTCAAGGGCCTGATCGCGCGCGCCGTGCTGCTGTGCGAGGGCGGCGAGCTGCTGCCCGAGCATTTCAGCCTGGAGCAGACGCCGAGCGAAGGCAGCGCACCGCTGAGCCTGCGCGAGCGCATGGACCGGGTCGAACGCAATCTGCTGCTCGACTGCCTGCGCAAGAACCGCGGCAACCAGACCAATGCCGCCAACGAGCTGGGCCTGCCCCGGCGCACCCTGCTGTACCGCATGCAGCGGCTGAAGATCAGCCCGAGCGAGGTCTGA MSSLNPSLMFSQIPQPLRYAEALLQRFAQLARHASADALLGGLVEAAAQLSASELSQLYLLDATHTRLTLSAEWQDGQLQRRAEASLPSDYDGEQLLQYCLCQNQLLSLTELDSSLHSIGFLPESGQPWRSLLCQPLLDEHRQVNGLLLIASHKPRELQGFAGSLGQLGGFAIAQLHLLQRLRAPQSEAATQPTPSCASGYGLIGDSPAMRNVYQLIGKVLHNSVSVLLTGETGTGKELVARAIHDCGSRRSKAFVVQNCASLPENLLESELFGYRKGAFSGADRDHQGLFDAANGGTLFLDEIGDMPLSLQAKLLRVLQEGEVRPLGSTRTHKVDVRIVSATHHNLRSLVEEGRFREDLFYRLSHFPIELPPLRARGEDILRLARHFAVEAACFLQRDAYRWSEAALEHLAGYAFPGNVRELKGLIARAVLLCEGGELLPEHFSLEQTPSEGSAPLSLRERMDRVERNLLLDCLRKNRGNQTNAANELGLPRRTLLYRMQRLKISPSEV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0099 CDS 97126 97260 + hypothetical protein YP_001185605.1 146305140 5106284 Unknown[Class 3] ATGCTGCATCGCTACCGGACCGCCGCCCTGCTGGCCCTGGCCCTCGTCCTGGCCGGCTGCACTGGCAACTACAAGTTCAGCGACGACCAATACCGCCCGCTGGGCGATCCGCAAGCCGAGAAACGCGGCCACTGA MLHRYRTAALLALALVLAGCTGNYKFSDDQYRPLGDPQAEKRGH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0100 CDS 97281 98477 + FHA domain-containing protein YP_001185606.1 146305141 5106285 PFAM: Forkhead-associated protein Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03354|VI_FHA|type VI secretion system FHA domain protein|hypoth_equivalog|6.1e-153||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00498|FHA, FHA domain|29|97|2e-09 COG3456|COG3456, Uncharacterized conserved protein, contains FHA domain [Signal transduction mechanisms]. ATGGAACTGGTATTCGAGATGGTCAGCGCACAGCAGTTCGTGCCGGGTCTGCTGACCACCAAGACCTTCAAACAGGCTGGCGGCGTGATCGGTCGCGCCGAGGATTGCGACTGGGTGATCCCCGATCGCAAGCGCATCCTCTCCAGCCGTCATGCCGAGGTCAGCTATCGCGATGGCGCCTTCTACCTGACCGACACCAGCAGCAACGGCATCGCCCTCAAGGACAGCGGCGCCAGCCTGGCCAAGGGCCGCCCGCAGCGTATCGAGCACGGCAGCGTGTACTGCCTGGGCGACTTCGAGATTCGCGCACGGCTGATTCAGGATCCGGCCATGTTCGAGGGCGATATCGGCCTGCCGCAGGCAGCCGGCAGCATCATCCCCGACGACGCCTTCCTCGACCTCGACCCGCTCACCGCGCTGGAGCAGCAGGAGCGCGTCTACGCCGAGGTGGACGATCTGACCGCCGTGCTGCGCCCCAGCACCGCCCAGGCGCAGCAGCGCGACTACGCGCAGATCGACGAGGAAAACCTGCTGGTGCCCGAGCTGGTGATGCCGACGCCGCCGGCCCAGCCGAAACCCGCGCCGGAGCCCGAGCGCCTGCCGCCGAGCTTCTGGGAAAAGTTCGCCGATGCCCTCGGCGTGCGCCTCGACGATCTCGATGACGATGCCCGCGAAGCCCTGGCGCTCAATGCCGCCAAGCTGCTCAGGCAGAGCGTCGGCAGCCTGCAGCAGGCCCTGCGCACGCGCGGCGAGCTGAAGAACGAGCTGCGTCTGGCCCTGACCACCGTGCAGGGCGCCGGTAACAACCCGCTCAAGCACGGCCTGGATAGCGGGGAGACGCTGACCGCCCTGCTGCGTGGCGGCAAACCCGGTCAGCTGCCTGCCGAGCAGGCCATCAGCCGCGGCTTTCGCGACCTGCAGGCGCACCAGGTGGCGTTGCTCGCCGCCAGCCGCGCGGCGGTCAAGGGCATGTTCGAGCAGTTCGCCCCGGAGCAGCTGGCCATGCGCTTCGAACGCAACGGCCGCAAGCCGCTGCTCGCCACCGCCGGCAGCCGCTGGCGCGCCTACCGCCGCCTGCATGCGGATCTGGCGCAGAACGACGACTGGAGCGACCGCCTGTTCACCCGCGATTTCGCCAGTGCCTACGAAGAGCAGGTTCGCCTGATCGCCACCCTCAATACCGACCTTCAAGGATGA MELVFEMVSAQQFVPGLLTTKTFKQAGGVIGRAEDCDWVIPDRKRILSSRHAEVSYRDGAFYLTDTSSNGIALKDSGASLAKGRPQRIEHGSVYCLGDFEIRARLIQDPAMFEGDIGLPQAAGSIIPDDAFLDLDPLTALEQQERVYAEVDDLTAVLRPSTAQAQQRDYAQIDEENLLVPELVMPTPPAQPKPAPEPERLPPSFWEKFADALGVRLDDLDDDAREALALNAAKLLRQSVGSLQQALRTRGELKNELRLALTTVQGAGNNPLKHGLDSGETLTALLRGGKPGQLPAEQAISRGFRDLQAHQVALLAASRAAVKGMFEQFAPEQLAMRFERNGRKPLLATAGSRWRAYRRLHADLAQNDDWSDRLFTRDFASAYEEQVRLIATLNTDLQG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0101 CDS 98483 98965 + hypothetical protein YP_001185607.1 146305142 5106286 Bacterial secretion system [KEGG] Unknown[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03352|VI_chp_3|type VI secretion lipoprotein, VC_A0113 family|hypoth_equivalog|8.3e-63||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis COG3521|COG3521, Uncharacterized protein conserved in bacteria [Function unknown]. ATGCCTCGCCTGCTTTCCCTCGCCTTCATCGCCGCGCTGCTGAGCCTGGCCGGCTGCGCCGCGCTGTCGCCCTATTCGAGCATGACCAAGCTGGACCTCAGCCTGGCCGGCAGCGACCAGCTCAACCCGGACCTGCACGGCCGCCCCTCGCCCATCGTGCTGCGCCTGATGGAGCTCAAGCACCCGGTGGCCTTCGAGAATGCCGATTTCTTCTCCCTCTACCAGCGTCCCAAGGAGGCCCTGGCGCCCGACCTGGTGACCCTCGAGGAACTGGAGCTGCGCCCGGGCGAGACCCGCGAGCTGAAACTCTCGGTGGGTGAAGGCAGCCGCTACGTCGGCGTGCTCGCCGCCTACCGCGACCTGCCGGAAGCCAACTGGCGCTACGTCATCGCCATCGACGAGCAGCAGCGCAACCAGGCGCGCCTGCGCCTCGACGAGCGCGGCATCCGCAACCTCGATGCCGAGCAGGAGCGCAGCCGATGA MPRLLSLAFIAALLSLAGCAALSPYSSMTKLDLSLAGSDQLNPDLHGRPSPIVLRLMELKHPVAFENADFFSLYQRPKEALAPDLVTLEELELRPGETRELKLSVGEGSRYVGVLAAYRDLPEANWRYVIAIDEQQRNQARLRLDERGIRNLDAEQERSR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0102 CDS 98962 100293 + hypothetical protein YP_001185608.1 146305143 5106287 PFAM: protein of unknown function DUF876 Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03353|VI_chp_4|type VI secretion protein, VC_A0114 family|hypoth_equivalog|2.6e-210||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF05936|DUF876, Bacterial protein of unknown function (DUF876)|18|442|1e-138 COG3522|COG3522, Uncharacterized protein conserved in bacteria [Function unknown]. ATGAGCCAGCATAAAGTCATCTGGCAGGAAGGCATGCTGCTGCGCCCGCAGCACTTCCAGCAGAACGATCGCTACTTCGAGCACCAGCTCAAGGTGCGCACGCAGAAACTAGACAGCTACGCCTGGGGCTTCTTCGAACTGGAGATCGACCGCCAGTTCCTCAACATGGGCAAGCTGGTGGTGAGCAAGGCCAGCGGCGTGCTGCCCGACGGCAGCCTCTTCGACCTCGGCGCCGAACGCGAGCCGCTGGGCCTGGACGTGCCGCCGAACACCGGCAATACCCCGGTGTACCTGGCGCTGCCGCTGGTCACCGGCAACCATATCGAGAGCCGCCGCCCGGAGCAGAAGGATGTGCTGGCACGCTACGTCGCCTTCGACGAGGAAGTCGCCGACTGCAACGCCGGCGGCAGCAGCCACAGTCAGGTCAGCACCGGCCGCCCGGATTTCCGCCTGCTGCTCGGCGAGCAGCAGAGCGACCAGGCCTATGTGAAGCTCAAGCTGTGCGAGGTGCTCGACACCACGCCGGACGGGGTGATCAGCCTCGACCCGGAATTCAGCCCGACCTACGTCAACTTCCAGGCTTCCGGCTACCTGCTGAGCTGCCTCAAGGAAGTGATCAGCATGCTCGCCCACCGCGGTGACATCCTCGCCGAGCGCATCCGCGCCACCGGCAAGGTGGGCGGTGCCGAGGTCGGCGACTTCATGATGCTGCAGCTGATCAACCGCTACGAACCGATCCTGCGTCACCACCTGGGCGTCGAGCAGGTGCATCCGGAGCAGATCTACCGCGAGCTGGTCGGCCTGCTCGGCGAGCTGGCGACCTTCTCCAGCGAGACCAAGCGCCCACGCCTGGAAGGCCGCTACCTGCACAGCGACCAGGGCATGAGCTTCCGCAAGCTGATGGACGCCATTCGCCAAGTGCTGTCGATGGTGCTCGAACAGCACGCCATCGAGATGCTCCTGCAGCAGCGCCAGTACGGCATTCAGGTGTCGCCGCTGCACGACCACAAGCTGCTCGGCACCTCCAGCTTCGTGCTCGCCGCCAGCGCCCAGTGCGATTCCGAGGAGCTGCGCCAGCGTCTGCCGGCACACCTCAAGGTCGGCCCGGTGGAGCGCATCCGCCAGCTGGTCAACCTGCACCTGCCGGGGATCAAGGTCAAACCGCTGCCGGTGGCACCGCGGCAGATCCCCTTCCATTCGGGCAAGACCTACTTCGCCTTGGAGCTCAGCTCCGAGGAACTGGCGCAGCTGGAACGCTCCGGCGGCTTCGCCTTCCACGTGTCCGGCGAGTTCTCCGGGCTTGAGCTGAAATTCTGGGCGATCAGGAACTGA MSQHKVIWQEGMLLRPQHFQQNDRYFEHQLKVRTQKLDSYAWGFFELEIDRQFLNMGKLVVSKASGVLPDGSLFDLGAEREPLGLDVPPNTGNTPVYLALPLVTGNHIESRRPEQKDVLARYVAFDEEVADCNAGGSSHSQVSTGRPDFRLLLGEQQSDQAYVKLKLCEVLDTTPDGVISLDPEFSPTYVNFQASGYLLSCLKEVISMLAHRGDILAERIRATGKVGGAEVGDFMMLQLINRYEPILRHHLGVEQVHPEQIYRELVGLLGELATFSSETKRPRLEGRYLHSDQGMSFRKLMDAIRQVLSMVLEQHAIEMLLQQRQYGIQVSPLHDHKLLGTSSFVLAASAQCDSEELRQRLPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIPFHSGKTYFALELSSEELAQLERSGGFAFHVSGEFSGLELKFWAIRN Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0103 CDS 100296 101177 + hypothetical protein YP_001185609.1 146305144 5106288 Bacterial secretion system [KEGG] Cytoplasmic[Class 3] biological_process|GO:0052048|interaction with host via secreted substance|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03349|IV_VI_DotU|type IV / VI secretion system protein, DotU family|subfamily_domain|3.5e-99||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF09850|DUF2077, Uncharacterized protein conserved in bacteria (DUF2077)|62|267|1e-73 COG3455|COG3455, Uncharacterized protein conserved in bacteria [Function unknown]. ATGACCATCAAGGAAATGGAATACGGCCAGGATGACAAGACGGTCATCCTCAACCGCAAGGGCGAAGCCCGCGCCGAAAGCCCGCTGACCGACTTCAGCGCGCCACCGAAATTCGAGCAGCTGGAAGAACGCATGATCTTCGCCGCGCGCCTGCGCCCGGCGGAGAGCTTCAACATCAGCCTCAACCCGCTGGTGGCGGCGGCCTCCGCGCTGCTCTCGGAAGTGGTGCGGCTCAAGCACAGCTTCGAAAGCGAGGACCTGGACGCCCTCAACCAGCGCCTGACCCGCGAGATCAAGCTGTTCGAACACCGCGCCCTGCACGACGGCGCGGAAAGCAGCCAGGTGATGGCCGCGCGCTACGTGCTGTGCACCGTGGTCGACGAAGCGGTGGTGACCACGCCCTGGGGCAACGAGAGCCAGTGGTCGCAGATGAGCCTGCTGTCCTCCTTCCACAACGAGACCTTCGGCGGCGAGAAGTTCTTCCAGCTGCTCGAGCGCCTGTCGCGCAACCCGGTCAAGCACCTGCCGATGCTGGAGCTGATGTACCTGTGCCTGTCGCTCGGCTTCGAGGGCAAGTACCGCGTGCTGCCGCGCGGCATGCTCGAGCTGGAAGCGGTGCGCGACAGCCTCTACCGGCAGATCCGTCAGCTGCGCGGCGATGTGCCGCGCGAAGTCTCGCCGCACTGGCAGGGCCTCAAGGACACCCGCCGGCGCCTGGTGCGCATCGTGCCGTGGTGGCTGGTGGCGCTGTTCACCCTGATGTGCCTGGTGATGATGTACGCCGGCTTCGCCTGGGTGCTCGGCGAGCAGCGCGACACCGTCCTCAAGCCGTATCAGCAACTCGACCCGGCCTCGGGTGTCAGCATGGATGACGTGAAATGA MTIKEMEYGQDDKTVILNRKGEARAESPLTDFSAPPKFEQLEERMIFAARLRPAESFNISLNPLVAAASALLSEVVRLKHSFESEDLDALNQRLTREIKLFEHRALHDGAESSQVMAARYVLCTVVDEAVVTTPWGNESQWSQMSLLSSFHNETFGGEKFFQLLERLSRNPVKHLPMLELMYLCLSLGFEGKYRVLPRGMLELEAVRDSLYRQIRQLRGDVPREVSPHWQGLKDTRRRLVRIVPWWLVALFTLMCLVMMYAGFAWVLGEQRDTVLKPYQQLDPASGVSMDDVK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0104 CDS 101174 104713 + ImcF domain-containing protein YP_001185610.1 146305145 5106289 PFAM: ImcF domain protein ; PFAM: ImcF domain protein; protein of unknown function DUF1215 Bacterial secretion system [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03348|VI_IcmF|type VI secretion protein IcmF|hypoth_equivalog|0||Cellular processes|Pathogenesis PF06744|DUF1215, Protein of unknown function (DUF1215)|914|1038|2e-37 ; PF06761|IcmF-related, Intracellular multiplication and human macrophage-killing|502|794|6e-70 COG3523|IcmF, Uncharacterized protein conserved in bacteria [Function unknown]. ATGAAGAGCTTCTTCGCCAAACTTGGCGCCTTTTTCCGCAAGACCTGGGTCTGGAGCCTGCTGCTGGTGCTGGTCCTCGCCCTGCTGGTGTGGTTCGTCGGCCCGCTGCTGGCGGTCGACGACTACAAGTTCTGGGAGTCGGCCACCAGCCGCCTGCTGACCATCAGCCTGCTGTTCCTGCTCTGGGGCCTGGCCATGGTGTTCGCCAGCTGGCGCGCCACCGCACGCAAGAAGGCCGAGGAGAACGACGCCGAGGCGCAGGAGCGCCTGCGCCGCGAGGAGCAGATCGGCGAGGAGCAGAATGAGCTGCGCCACCGCTTCAAGGACGCCCTGCGCACCCTCAAGCGCTCCAGCCTGTACCGCGGGCGCAGCGAGAAGTGGCGCAACGATCTGCCCTGGTACCTGCTGCTCGGCCCGCAGGGCAGCGGCAAGACCAGCCTGCTGGACTTCTCCGGCCTGGACTTCCCGCTCAACCGCGGCGACAGCCAGCGCCTGACCAAGGACGTCTCCGGCACCCGTTATGCCGACTGGTACTTCGCCGATCACGCCGTGCTGATCGACACCGCCGGGCGCTACCTGACCCAGCCAGACGCGCAGGTCGACGGCCGCGCCTGGGGCACCCTGCTCGGCCTGCTGCGTCAGCGCCGCGCGCGCCCGCTCAACGGCGTGCTGGTGAGCATTCCGGTGGAGCAGCTGCAGGGCGGCAGCGAGGTGGAGCTGGAAACCCTGGCCCGCCAGACCCGCCAGCGCCTGCACGAGATCCATCAGCGCCTGGGCGCCGACGTGCCGGTCTACCTGGTGCTGAGCAAGGCCGACAAGGTGCTGGGCTTCGACGAGTTCTTCGACCAGCTGTCGCGCGAGGAGAGCGAGCAGGTGCTCGGCGCCAGCTTCCGCAAGGAGCAGAACGCCAGCGACGTGGCCGTGGTGCGCCAGGAGTTCGAAGAACTGCTGCGCCGCCTCAACAGCCAGGTGATCCTGCGCATGCACCAGGAGCGTGATACCCAGCGCCGTGGCCGCATCCTCGACTTCCCGCACCAGCTCGGCCAGATCGGCGAGCGCCTGTGCCTGTTCATCGAACTGGCCTTCGCCGGCAACCGTTACCAGCGCGCCAGCAAGCTGCGCGGTTTCTACCTGACCAGCGCACCGCAGCTCAACGAACAGCTCGACCCGCTCACCGCCGGCATCGGCCGCAACCTCGGCCTGGCCGGCAGCGCGCTGCCGACCTTCCGCACGGGCCGTGCACGCTTCATCAACCACCTGCTCAGCCGGGTGATCTTCCCCGAGGCCGACCTGGCCGGACTCGACCAGAAGGAAGTGCGCCGCATCGACTGGGGCCAGCGCGCCATGTATGCCACCGCCTTCGCCGTGCTGGCGCTGTTCGGCGTGCTCTGGGCCAGCGGCTTCTCGGCCAACCACGGGCGCCTGGAACAGCTGCGCGAGATCGCCCAGAAGCTCACCCGCGAGCACCAGGCGATCAACCCGCAGGACGACGCCCTGCAGACCCTCAAGGCGCTGGACAGCAGCTACGCCGCCACCCTGGTGTTCCCGCCCAAGGGCGAGGTGTCCTACCTGCAGCGTACCGGCCTGTTCCAGGGCGAGGCGGTCAATCCGGCCGTTTATTCGACCTACCGCGCCGAGCTGGAAACCCTGCTGCTGCCTCGCGTGGCGCGGCAGCTGGAGGCGCAGATCCGCGCCAACCTCGGCGACCGCGAGCGCCTGCTCGGCAGCCTGCGCGCCTACCTGATGCTCAACCTGGAACAGCGCCGCGACGCCGCCTTCCTCAAGGAGTGGGTAGCCGCCGACTGGTCGCTGCGCTATGCCGGCAACAGCCCGGCGCAGCATGGCCTCAACACCCATTTCGCCCGTCTGCTCGACGAGTCCTTCGCGCCCTATGCGCTCAACGCCCAGCTGGTCGCCCAGGCGCGCCAGGTGCTGCGCAGCGAGTCGCTGGCCAATGTGGTCTATCGCATGCTGCGCGAACAGGCGCGCAGCCTGCCGGACTACCGTCTGAGCCAGAAGCTCGGGCCGCAGGCCGGGCTGATCAATGGCAGCGACTACGCCATCCCCGGCTTCTACACCCAGGCCGGCTACAGCAAGACCTTCACCGCCCAGGGCGGCAACCTGGTGCGCGAGATCCTGCGCGACAACTGGGTGCTGGGCGAGGGCGAGAGCCTCAGCGCCGGCGACCTCGGCCGCCTGATGGTAGAGCTGGAGCAGCTGTACTTCCGCGATTACGGCAACTACTGGGGCGAGGCCATTGCCCAGCTCAGCCTGGAGCCGATCGGCAGTGCCGGCCGTGGTGCTGCCCTGCTCGGCGGCCTGACCGCGGCCAACTCGCCGCTGCTGCAACTGCTGGTGGAAGTGCGCGACAACACCCGCTTCAAGGGCCTGGCCGAGGCCGCCGATGACGCCGGTGCCGCCGCCGAAGCGCTGGAGGGCGCCAAGGGCAAGCTGGGCAAGGCCGCCAAGCTGGCCAGCGCTGCCGCCGAACAGGCGCAGCAGGCCCTGGCCAAGAACACCCCGGACACCGCGCGCAAGACCCTGGAACGCCGCTTCGAGGTGCTGCACAAGCTGCTCGACGACAACGGCGGCGCCGGCGTCGAACTGGCCGCCAGCCTGCAGGCATTGGACGAACTGCAGCGCCAGCTGGCCAGCCTGGCCAATGCCGGTGCCAGCGACCAGGCCGCGTTCGAGATGGCCAAGGCGCGCATGGCCGGCAAGCGCGATGCGATCAACCAGGTACGCAGCGCCGCCGCGCGCCTGCCGCAGCCGGTGGGCAACTGGCTGGCGCTGCTGGCCGAGGACAGCTGGACGCTGGTGCTTAACGACGCCTACCACTTCCTCAACCAGCGCTATCAGAGCGAGCTGTACGCCGCCTACGACAACTCGCTGAAGCAGCGTTACCCGTTCAGCGCGCACAGCGAGAGCGACGTGGCGGTGGCGGATTTCCGCGAGTTCTTCAAGGCCCAGGGCATCGCCGAGCGCTTCTTCGACCAGTACCTGCGCCCCTTCGTCAGCGGCAGCGCCGACGAATACCGCCTGCGCCGCGTCGATGGCCGCGGCCTGCCGCTGTCGCGCGAGTTCCTCCTGCAGATGAGCCGCGCCCAGGTGATCCGCCGCAGCTTCTTCGCCGAGAACCCGGCCGAGCCGCAGGTGCTGTTCAAGCTCGAGCCCTACTCGCTGGACTCCAGCCTGAGCCGCGCCGACTTCCGCTTCGGCAAGCAGCAGCTGGAGTACCGTCACGGTCCGATCGTCGCCACCGCCTTCCGCTGGCCGGCGGCGAGCGAGGAAGACCGCACCAGCCTGGTGGTCGAGGAGCTTGGCGGTCGCCGCGTCGGCATCGAGAAGAACACCGGCCCCTGGTCGCTGTTCCGCCTGCTCGACCTGATGGACGTGGACTACCACAGCGGTCGTGACGTGCTGATCCTCAAGGCCAACCTGGGCGGCCTGCACGCCAACTACCTGCTGCACAGCCAGCGCTCGCCGAACCCGTTCGACATCGGCCTGCTGCGCAGCTTCAAGCTGCCGGCGACGCTCTGA MKSFFAKLGAFFRKTWVWSLLLVLVLALLVWFVGPLLAVDDYKFWESATSRLLTISLLFLLWGLAMVFASWRATARKKAEENDAEAQERLRREEQIGEEQNELRHRFKDALRTLKRSSLYRGRSEKWRNDLPWYLLLGPQGSGKTSLLDFSGLDFPLNRGDSQRLTKDVSGTRYADWYFADHAVLIDTAGRYLTQPDAQVDGRAWGTLLGLLRQRRARPLNGVLVSIPVEQLQGGSEVELETLARQTRQRLHEIHQRLGADVPVYLVLSKADKVLGFDEFFDQLSREESEQVLGASFRKEQNASDVAVVRQEFEELLRRLNSQVILRMHQERDTQRRGRILDFPHQLGQIGERLCLFIELAFAGNRYQRASKLRGFYLTSAPQLNEQLDPLTAGIGRNLGLAGSALPTFRTGRARFINHLLSRVIFPEADLAGLDQKEVRRIDWGQRAMYATAFAVLALFGVLWASGFSANHGRLEQLREIAQKLTREHQAINPQDDALQTLKALDSSYAATLVFPPKGEVSYLQRTGLFQGEAVNPAVYSTYRAELETLLLPRVARQLEAQIRANLGDRERLLGSLRAYLMLNLEQRRDAAFLKEWVAADWSLRYAGNSPAQHGLNTHFARLLDESFAPYALNAQLVAQARQVLRSESLANVVYRMLREQARSLPDYRLSQKLGPQAGLINGSDYAIPGFYTQAGYSKTFTAQGGNLVREILRDNWVLGEGESLSAGDLGRLMVELEQLYFRDYGNYWGEAIAQLSLEPIGSAGRGAALLGGLTAANSPLLQLLVEVRDNTRFKGLAEAADDAGAAAEALEGAKGKLGKAAKLASAAAEQAQQALAKNTPDTARKTLERRFEVLHKLLDDNGGAGVELAASLQALDELQRQLASLANAGASDQAAFEMAKARMAGKRDAINQVRSAAARLPQPVGNWLALLAEDSWTLVLNDAYHFLNQRYQSELYAAYDNSLKQRYPFSAHSESDVAVADFREFFKAQGIAERFFDQYLRPFVSGSADEYRLRRVDGRGLPLSREFLLQMSRAQVIRRSFFAENPAEPQVLFKLEPYSLDSSLSRADFRFGKQQLEYRHGPIVATAFRWPAASEEDRTSLVVEELGGRRVGIEKNTGPWSLFRLLDLMDVDYHSGRDVLILKANLGGLHANYLLHSQRSPNPFDIGLLRSFKLPATL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0105 CDS 104713 105441 + protein phosphatase 2C domain-containing protein YP_001185611.1 146305146 5106290 PFAM: protein phosphatase 2C domain protein ; PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein Bacterial secretion system [KEGG] Cytoplasmic[Class 3] PF07228|SpoIIE, Stage II sporulation protein E (SpoIIE)|37|241|2e-06 ; PF00481|PP2C, Protein phosphatase 2C|14|206|4e-12 COG0631|PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]. ATGCCGGCAGTCGTCAACGCCTGGCGCAGCGCCGCGCGCACCGACACCGGCAAGGTGCGCGCGCGCAACGAGGATGCCTTCCTGGCCCTGCCCGAGCAGGGCCTGTGGGTGGTGGCCGACGGCATGGGCGGGCACCAGAACGGCGCCCTGGCCAGCCGCCTGATCGTCGAGCAGCTGGCCGAGCTGGCGCAGGGCAGCCTGGAGCAGCGTCTGGTGGAGCTGCGTCAGGCGCTGCACCGGCTCAATCATCGCCTCGGTCAGGAGCTGACGGTGACCGCCGACCGCCCGGACACGGTGATCGGCAGCACCGTGGTCGCCCTGCTGCTCGACGGCGACCGCGCCGCCTGCGTCTGGGCCGGTGATAGCCGCTGCTACCTGTGGCGCGGTGCGCGTCTGTATCAGCTCAGCCGCGACCATTCACTGGTGCAGCAACTGATCGACGAACAGGGCCTGACGCCGCAGGAGGCCGCGCGCCACCCGGCGGCGCATGCCCTGACCCGCGCCATCGGCGCCAGCGAGACCCTGCAGCTGGACATCCTCGAACTCGACGTGCTGCCCGGCGACGTCTTCCTGCTGTGCAGCGACGGCCTCTACCAGGGCGTTTCCGCCGACGAGCTGGGCGCCTGCCTCAACCTGCCTTCGCCGCACCTGGCCGTGGAGCGCCTGTTCCAGCGCGTGCTCGACGGCCCGGCCCGTGACAACCTCAGCGCCGTGGTGATCCGCCAATGA MPAVVNAWRSAARTDTGKVRARNEDAFLALPEQGLWVVADGMGGHQNGALASRLIVEQLAELAQGSLEQRLVELRQALHRLNHRLGQELTVTADRPDTVIGSTVVALLLDGDRAACVWAGDSRCYLWRGARLYQLSRDHSLVQQLIDEQGLTPQEAARHPAAHALTRAIGASETLQLDILELDVLPGDVFLLCSDGLYQGVSADELGACLNLPSPHLAVERLFQRVLDGPARDNLSAVVIRQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0106 CDS 105438 106409 + protein kinase YP_001185612.1 146305147 5106291 PFAM: protein kinaseSMART: tyrosine protein kinase ; PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase Cytoplasmic Membrane[Class 3] PF00069|Pkinase, Protein kinase domain|43|305|1e-32 ; PF07714|Pkinase_Tyr, Protein tyrosine kinase|44|285|3e-16 COG0515|SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]. ATGATCGAAGCCGCCGAAGCCAGCGACCTCACCTACTTCGCCCTGGCCGCCACCGCCGCCAGGGAACCCGTGCGCGAAACGCCGCGCCAGGCTCCCGGCGAGCTGCCGGAAGTGCTCGGCGGCCGCTACCGGATCGAGCGTCTGCTCGGCGTCGGCGGTATGGGCGCGGTGTATCGCGCGCGCGATCTGCTGCGCGAACAGTTCGGTGACCCCGAGCCCTATGTCGCGCTGAAGACCCTGAGCGACGACTTCGCCGAATACCCGGACGCCAACGCCCTGCTCTACAGCGAGTTCGCCCTTACCGCGCGGCTCAGCCACCCCAACGTGGTGCGTCTGTTCGGTTTCGAGGTGGACATTCCCAGCCAGCGCGCCTTCATCACCCTGGAACTGCTGCGCGGCCTGACCCTCGATCAGCTGCTCTGCGAACGCCCCGAGGGCCTGCCCTGGGACGAGCTGCGTGGCATCGCCATCCCGCTGCTCGAAGCCCTGTGCTATTCGCACCAGCTGGGCGTGCTGCATGGCGATCTCAAGCCCAGCAATGTGATGCTGGCCGAAGACGGCCTGCGCCTGTTCGACTATGGTCTCGGCCAGCCGGTGGAGGGCCTGCTGCCCGGTCTGCCACGCCTGTGCCGCAGCCGCATCGCCGCCTGGACACCGCGCTACGCCGCGCTGGAGTTGCTCGAAGGCGCGCCGCTGTCGGCGGCTGCTGATGTCTATGCGCTGGCCTGCGTGCTGGTCGAGCTGGCCAGCGGGCAACACCCGTTCCGCCGCCTCAGCGCCAAGCAGGCCAAGAGCATGGAGCTGGACAGGCAGTTGCAACGCCCGGCGCAGGTGCCGCTGCACTGCTGGCAGGCCCTGCGCACCGCGCTGGCCTTCGACGAAAGCCAGCGGCAGATCGACTGCAGCGAGCTGCTCGACGCGTTTCGCCGGCCACCGGCCTCGCGTCTGCGCCGCTGGCTGGGCAAGGCATAA MIEAAEASDLTYFALAATAAREPVRETPRQAPGELPEVLGGRYRIERLLGVGGMGAVYRARDLLREQFGDPEPYVALKTLSDDFAEYPDANALLYSEFALTARLSHPNVVRLFGFEVDIPSQRAFITLELLRGLTLDQLLCERPEGLPWDELRGIAIPLLEALCYSHQLGVLHGDLKPSNVMLAEDGLRLFDYGLGQPVEGLLPGLPRLCRSRIAAWTPRYAALELLEGAPLSAAADVYALACVLVELASGQHPFRRLSAKQAKSMELDRQLQRPAQVPLHCWQALRTALAFDESQRQIDCSELLDAFRRPPASRLRRWLGKA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0107 CDS 106434 108515 + Rhs element Vgr protein YP_001185613.1 146305148 5106292 PFAM: Rhs element Vgr protein Bacterial secretion system [KEGG] Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03361|VI_Rhs_Vgr|type VI secretion system Vgr family protein|subfamily_domain|0||No Data|No Data PF04524|DUF586, Protein of unknown function, DUF586|390|469|6e-38 COG3501|VgrG, Uncharacterized protein conserved in bacteria [Function unknown]. ATGTTGAACCCGGCCAATGAAACCCATTTCAGCCTGACCATCGAAGGCGTCGAGCACGATCTGCAGGTGCTCGAATTCAACGGCCGCGAGGCCATCAGCCAGCCCTATCGCTTCGACGTCGAGCTGATCAGCGAACGCCCGGATCTCGATCTGACCAGTCTGCTGCATCAGCGCGCCTTCCTCGCCTTCAGCCCCAATGGCGACGGCATCCACGGCCTGATCCACCGGGTCGAGCAGGGCGAGTCCGGCAAACGCCTGACCCGCTATCGCCTGGCCATCGTGCCGCAGCTCGCCTACCTGGCGCACCGCACCAACCAGCGCATCTTCCAGCACCTGACGGTGCCGCAGATCATCGCTCAGGTGCTGGAAGAACATGGCATCGTGGAGGGCCGCTACCAGTTCCAGCTAGGCCCCAGCGTCTACCCGCAGCGCGAGTACTGCGTGCAGTACGACGAGAGCGACCTGCACTTCGTCCAGCGCCTGTGCGAGGAAGAAGGCATCCACTACCACTTCCAGCACAGCGCAAGCGGCCATGTGCTGACCTTCGGCGACGACCAGACCGCCTTCGCCAAGCTCGGCCAGCCTACGCCCTATATCCAGGACAGCGGCATGACCGCCGACGATCCGGTGATCAAGCGCCTGGCCCTGCGCCTGGAAACCCGCACCCGCAGCACCGCCCGCCGCGACTACGACTTCGAGCAGCCGAGGCTGCTGCTGGAGGCGGCCTACCAGGGCGAGCAGGCCGGCGAAAACGACGGCCTGCCCGATCTGGAAGACTACGACTACCCCGGCCGCTACACCGACCGCACGCGCGGCAAGCACCTGGCCAAACGCGCCCTGGAGCGCCACCGCGCCGACTACCAGCAACTGCAAGGCCAGAGCGACCAGCCGCGGCTGGTTACGGGGCATCTGCTGGAAATCTCCGAACACCCGCGCCGCGAATGGAACGACCTCTGGCTGCTCACCGAAGTGCTGCACGAAGGTAAACAGCCGCAGGTGCTGGAGGAGTCGGTGTTGAACCTCCCCTCTCCCCCCGGGAGAGGGGCCGGGGGTGAGGGTACTTCAGGCGACACCGACTTCACCCAAGGCTACCGCAACCGCTTTCTCGCCACCCCCTGGGACGTGCCCTTCCGACCGCCCTTGGTCCACCCCAAACCGCGCGTCCTCGGCAGCCAGAGCGCCGTGGTCACGGGCCCTGCCGGCGAGGAAATCCACTGCGACGAATACGGTCGAGTGAAGGTGCAATTCTTCTGGGATCGCGAAGGCCAGGCCGACGAGAAGACCAGCTGCTGGCTGCGCGTCAGCTCCAGCTGGGCTGGCGATCGCTACGGCGCCATCACCATCCCGCGCATCGGCATGGAAGTGCTGGTCACCTTCCTCGAAGGCGACCCCGATCAACCGCTGGTCACCGGCTGCCTCTACCACGCCGAACACCTGGTGCCCTACGACCTGCCGGCAAACAAGACCCGCAGCGTGTTCAAGACCCTGAGCAGCCCTGGCGGTGGCGGCTACAACGAACTGCGCATCGAGGATCGCAAGGGCGCCGAGCAGATCTACATCCACGCCCAGCGCAACTGGGACGAGAACATCGAGCACGACCAGAAGATCCGCGTCGGCAACGAACGCCACGACACCGTGGAGAAGAACAGCTACACCGAATTGCTGGCCGAGGAGCACCTCACCGTCACCGCCGACCGCAAGGTCGAGGTCAAGCCCCAGGACCACCTGACGGTGGCCACCGACCAACACATCAAGCTGGGCACCGCGCAACTGACCAAGGCCGGCCGCGAGATCCACCTGAAGGCCGGGCAGAAGATGGTCATCGAAGCCGGCATCGAACTGACGATCAAGGCCGGCGGCAGCTTTATCAAACTCGACCCCGGCGGCATCACCATCTCCGGCCCGCTGGCCAGGATCAACGCCGGCGGTTCGCCAGGCAAGGGCTCGGGGCTCAAGATCAAACCGCCGGTGCTGCCGGGTATGGCGGATAGCGACAAGGCGGGGAGTTTGTTGGAGCAGGCGGTTGGTAATGCGCTGACGCCCAAGGCAAAACCCAAACGCACGCTGAACTTCTCCGGTTAA MLNPANETHFSLTIEGVEHDLQVLEFNGREAISQPYRFDVELISERPDLDLTSLLHQRAFLAFSPNGDGIHGLIHRVEQGESGKRLTRYRLAIVPQLAYLAHRTNQRIFQHLTVPQIIAQVLEEHGIVEGRYQFQLGPSVYPQREYCVQYDESDLHFVQRLCEEEGIHYHFQHSASGHVLTFGDDQTAFAKLGQPTPYIQDSGMTADDPVIKRLALRLETRTRSTARRDYDFEQPRLLLEAAYQGEQAGENDGLPDLEDYDYPGRYTDRTRGKHLAKRALERHRADYQQLQGQSDQPRLVTGHLLEISEHPRREWNDLWLLTEVLHEGKQPQVLEESVLNLPSPPGRGAGGEGTSGDTDFTQGYRNRFLATPWDVPFRPPLVHPKPRVLGSQSAVVTGPAGEEIHCDEYGRVKVQFFWDREGQADEKTSCWLRVSSSWAGDRYGAITIPRIGMEVLVTFLEGDPDQPLVTGCLYHAEHLVPYDLPANKTRSVFKTLSSPGGGGYNELRIEDRKGAEQIYIHAQRNWDENIEHDQKIRVGNERHDTVEKNSYTELLAEEHLTVTADRKVEVKPQDHLTVATDQHIKLGTAQLTKAGREIHLKAGQKMVIEAGIELTIKAGGSFIKLDPGGITISGPLARINAGGSPGKGSGLKIKPPVLPGMADSDKAGSLLEQAVGNALTPKAKPKRTLNFSG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0108 CDS 108566 111730 + glycoside hydrolase family protein YP_001185614.1 146305149 5106293 PFAM: glycoside hydrolase, family 19 Unknown[Class 3] PF00182|Glyco_hydro_19, Chitinase class I|878|990|7e-08 COG3179|COG3179, Predicted chitinase [General function prediction only]. ATGGCAGACAACAAACCGATCAATTGGGCCTATCCGTTCAAGACCGCCGGCGAAGACAGTAAAGAAGTCAGCGATCCGCAGATATATCTCGATGCCTTGGCCAAAGCCAAAGATGGCTTCTATCCCATGGGGGCCAATGGTCTTTGGCATGGAGGCGTGCATTTCGATGACAACACCGCAGGGAGCCTTGACCAGTCCTCGATTCGTTGTATCGCGGACGGCGAGGTGATTGCCTACCGGATCGACCAGCGCTATCCCACCACCCAATATGGTGACGGCCGCGCGGTCGTGCATCTGCCGTTCTCAACAGGGTTCGTATTGGTCAGGCATCGTCTCGTACTGCCGTCTTTACCTGCACCGACCGCTCCTGGTGGTGAGCCAGGCGACACCACAACAGCCGCAACACCTACAGATACAGCCGCGTCATCGGCTGCGAGCACAGAAAGCGCGACAGCCAGTGAAGGGCTGACTTTTTACAGCCTGTATATGCACCTGCTCGACTGGGACAGCTATAAATCTGCCACTGCCCCTGAGCCCGCAGATTTCCTTGCGCCGACCTGCTATGCGGTCAAGTCCACCACTAATGATCCGCTCATGGGCTTGCGAGTCCGTGCATTGAACGACGACGGAACGAACAAAGTACTCGCCTTGCTCCCCAAGGGCTGTAAGGTCACGCTCGGCGAAGCGCACAGCATCAAGACGAAATATAAAAAGCTGCTCAGCATTGATGAAGGCATGGCCATACCCGCCCTACCGGCAGGTACCGAGGGCTGGGTGTATGAGGCTGAACTGACCGACAACACCGTAGCGGATAAGGCCACGGATACTGAGTCCGAGCTCACCCTTAGTCATCAGGGGGTGAGGGTTCGCAGGGAGGGCAAAGGTAATGGCACGATCATTGGCGTATTGCCGCGTGGTGCCACTCTCAAGGTGGGCGAGAAACAGAGAAGCGGTTATTGCAAGGTGCTGGAGGTCATGGACTATCGCGGCGTACCCGCACTGCCCAACGGGGCGGATGGCAAACCGCTAGGCTACGTTTTCTTCGACGCACTCGAAACACAGAAAACCGAGCCCAGTGCGCTGGATAGCGTTCATATCTTGCCCAAACCATACTCGATCAAGGCCGGTGAACTGGTAGGGCATATAGGTAAATACCAGAACCAAGACGAAGGCACGGCCAAGAAACGCCTGCACCTGGAAGTGTTCACCAGTGAGGACGTCCCGGCCTTTATCGAAAAAAGCCGTGCTATCGGGGAAAAGCTACCCGACGAACAGAAGACCCTGATCAAGGTGGACAAGGGCTCGAAGATCGTCCAGCCCGCCGCCGCCGATGCACAAGTCGAAGCGAGCGTGGATGTGCGCCTCTGCAGCGACTCTCCCAAGGCCGGTTGCTGGGCCAAGGTGCAGAAGTACGCTATCTGCAACGCTGACAAGAACAGCGAGCTGGGCAGTTACAACTCGACAAAGCTAACCTACACGCTAGGCGCTGCGCAGAAGACCATCCTGGCATCCCGAATGGGCCTCAACGCTGCGGATATGCCGGATCAGGTCGACTTTCTCAAGGTGTATTCCAATTCGGCCGATGGGGGCGACCCTCATGACTACGAGAGTGGCAGCATCCCTTCGACCCATCCATGGCGCAAAATCGGTGCTGTTGTTGGTAAACCCTTCTGGGTCAAACGATCCGCGCTGAACGCCCAAGGCCGGCGTACGAGCACAGCAGGCTCGCTTGATGCCTGGAGCGAGTTCCCTCTGTACAGTGGGCTCGAAGGTGAAGCCAGTGGTTACGTACGCATACTGCCCGCCAGCTCCTGGGATGCCTTGCCCGATGAACGCAAAGCCATCGACGCTGAACAAGTACGCTGGTGGTATGTCACTGTCGGAGATATGGAAGGCAACGACATCTCCGGTTGGGCACCAGAAAAAGATCTGATCGTCACACGTCACTCCCCTTGGGAATGGCCAGGTTTCAGTACCCTCCAAGACAAAGTCTCGCTGGACGCCCACCTGGCAAGAACCCTCGACGCCGCCGGGCGTGCTACAGAAGAGGAGACCGAGAGCTACGCGGCCCTGATCGAAGAGGCCGAGCGCGGCCCTATCCTCAGCAAGCTGTACGAAATCATCGACCAGCCAGACGAAAAGGGCGTCCGCGATAACAAGCTCACTCCAGAGGAATTCAAGGCTGCCCTCGCCAAACCCTGGTTGGCACAGCAGCTTTCCCTACTGATTAGCCAGCATGAAAGCGAATGGTTCTGGAACGAGAGCAAATGGAATCAGCTAGACAAGCTGATGGAGCACACGCCGGAAGATCCGAATCCTCAGTGGTTACGCGAGAAGGAGCGGATTAAAACGCTTAGCTGGTGGAAGGAATTGGCAGGGCAGCCAGGGATAGCGGCGGATGGAATGGCTTGGCATTTTCAACCGATTGGTTTGGTTGAAAGTTTTAAAAACAGCTCAAGTTGCTGCGAGCTATCTACCGATAAATTCAAAGCTATTTTTGGTGAAAGATCTATATTTTCAGCATGGAATATGCCGAGAGACAGCAAGGCATTCAATATTTCAATCGAGGAATTCGTAGAGCTTATAAATTCCGGCTTCAAGTCCTATGGATTTGAGTCCTGCCTTCATAAGGCGCACTTTCTTGCTCAGTGCTATCATGAAAGCGATCATTTTAACACTACTATCGAGTATGCAGACGGTATGGACTATGACTTAGCAACTCATCCGATCACCGTATGCGATACATATGGCGCGGACAGCAGGACATGTCGAAGGCACCATCAAATCATGGCCGAAGGGAATACAACCGTAGGGGACGGGCCAAAATATAAAGGGCGGGGACTCATACAAATAACATGGAAGAGTGCCTATCAAGCCTTTAGCACTTACAGTGGAGTTGACTGTGTTAGCAATCCTGAAATAATCGGAAGAAATATGAACATGGCAATAAATGCATCGCTATGGTTTTGGACTATATTCAAAGGAGAGAATCTAAACGCAAAAATCGAAAGATACTATCAAGAGCTTTCAGGCAACGCCAGCATGTCAGAAACACAAAAAGACGAAGAGGTGGTGCGCAGAATAACAGCAATAGTCAATGGCGGTGATCGCGGGCTTTCTGAAAGGAAGCAGCTATTTAAAAAAATCAGAGAGCAATTAAAATGA MADNKPINWAYPFKTAGEDSKEVSDPQIYLDALAKAKDGFYPMGANGLWHGGVHFDDNTAGSLDQSSIRCIADGEVIAYRIDQRYPTTQYGDGRAVVHLPFSTGFVLVRHRLVLPSLPAPTAPGGEPGDTTTAATPTDTAASSAASTESATASEGLTFYSLYMHLLDWDSYKSATAPEPADFLAPTCYAVKSTTNDPLMGLRVRALNDDGTNKVLALLPKGCKVTLGEAHSIKTKYKKLLSIDEGMAIPALPAGTEGWVYEAELTDNTVADKATDTESELTLSHQGVRVRREGKGNGTIIGVLPRGATLKVGEKQRSGYCKVLEVMDYRGVPALPNGADGKPLGYVFFDALETQKTEPSALDSVHILPKPYSIKAGELVGHIGKYQNQDEGTAKKRLHLEVFTSEDVPAFIEKSRAIGEKLPDEQKTLIKVDKGSKIVQPAAADAQVEASVDVRLCSDSPKAGCWAKVQKYAICNADKNSELGSYNSTKLTYTLGAAQKTILASRMGLNAADMPDQVDFLKVYSNSADGGDPHDYESGSIPSTHPWRKIGAVVGKPFWVKRSALNAQGRRTSTAGSLDAWSEFPLYSGLEGEASGYVRILPASSWDALPDERKAIDAEQVRWWYVTVGDMEGNDISGWAPEKDLIVTRHSPWEWPGFSTLQDKVSLDAHLARTLDAAGRATEEETESYAALIEEAERGPILSKLYEIIDQPDEKGVRDNKLTPEEFKAALAKPWLAQQLSLLISQHESEWFWNESKWNQLDKLMEHTPEDPNPQWLREKERIKTLSWWKELAGQPGIAADGMAWHFQPIGLVESFKNSSSCCELSTDKFKAIFGERSIFSAWNMPRDSKAFNISIEEFVELINSGFKSYGFESCLHKAHFLAQCYHESDHFNTTIEYADGMDYDLATHPITVCDTYGADSRTCRRHHQIMAEGNTTVGDGPKYKGRGLIQITWKSAYQAFSTYSGVDCVSNPEIIGRNMNMAINASLWFWTIFKGENLNAKIERYYQELSGNASMSETQKDEEVVRRITAIVNGGDRGLSERKQLFKKIREQLK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0109 CDS 111727 112542 + hypothetical protein YP_001185615.1 146305150 5106294 Unknown[Class 3] ATGAGATCAAATGCCATATATTTGACACTGTTGATGATGTGCGTAGAGCCCGCGCTTGGTGATATCTCCTACATTCCTATATCGGAAGACATAAAAATAAACACGGGCGACTTTGGCATTGGGTGTGACATGGAAGAAACTCATATATCTAGAGCTGGCAAGGATATTTTTATAGCCACAGGTGGCATCAATATAAGCATACCTATAGATATCGTGGGTGAAGATGCCGATGTTATCGTAGGAGACATGAGCGGTAACGGGCATTGTGATCTAGCAGTGCCGTATGGCAAAAGCGACGTTAATGAAAGCTATACGCTTTTCGTGTATGACATACCGCATGAAAAATTTAAGAAATCAAATGCCGGAATTATTTCAAATCCAGACTTTAAAGAAAATAAAATTATCAGCTCATACCGTGATGCAGCCCAATGGCATGAAGATTATTTTTGTTACTCTAAAAGCCTAGTTGACTTTTTCTTGTGCTCACAAAAGAAAAGCATAGACAACTCGCTTGAATGGTTAAGACTTTGCAGTGAGGACTTATGCGCCTCTTCGACAATCATTTACAAAGCCAGCTCAATACAAGCCTCAGCAGTGGTGACTGCAGATAGGGCAAAATTACACGACATAACGAACGGCAACATATTAAAAGAAAGAAAAGGCTATTTAGTAAAAGGCGACAAAGTTATGCTTATTGACTTCCTTCAAACTTATGAGGATGCTTACTACAAAGTCAATTACTTTAACAACAAGATGATAACTACCGGGTGGGTGAAGGGGGCGCAGTTAGTGGTTAATCCTGTCACAGAAAAGTAG MRSNAIYLTLLMMCVEPALGDISYIPISEDIKINTGDFGIGCDMEETHISRAGKDIFIATGGINISIPIDIVGEDADVIVGDMSGNGHCDLAVPYGKSDVNESYTLFVYDIPHEKFKKSNAGIISNPDFKENKIISSYRDAAQWHEDYFCYSKSLVDFFLCSQKKSIDNSLEWLRLCSEDLCASSTIIYKASSIQASAVVTADRAKLHDITNGNILKERKGYLVKGDKVMLIDFLQTYEDAYYKVNYFNNKMITTGWVKGAQLVVNPVTEK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0110 CDS 112621 113043 + hypothetical protein YP_001185616.1 146305151 5106295 Unknown[Class 3] ATGATGCGTATATTTTTTGTCTTGGTCTTTTCTATATGCTTTCCGTTAGTGGTAAATGGCTCGGAAAGCCATATGCCTATTTTTATGTGCAAAACGAAAAATAATAAGAATATTGAGGTGTATAGAGATGGAGATATGGTGACCTATTCGTTTGGTAGAAGCGATTACCCGCCAGAACTTAAATTGACACGGTCAATGGCAGATTTAGAGGTCGCAATAGGCAGTGTTTCTGGGAATGAAATTTCGAATTCTATAACTTTTTCAAATGGCGTGTATGCGTACAGAGTGATGACAACGATTAATAAAGTGTCTGCGACGCAGGAGCCCAGGCATGGGGTCTTGGTCAAGAAAAAAACTAAGTACTTAGCCTATATAGACTGCGTTCCAGAAACTGTGCAAGGAAGTTTGCTTGACTTGGAGTGA MMRIFFVLVFSICFPLVVNGSESHMPIFMCKTKNNKNIEVYRDGDMVTYSFGRSDYPPELKLTRSMADLEVAIGSVSGNEISNSITFSNGVYAYRVMTTINKVSATQEPRHGVLVKKKTKYLAYIDCVPETVQGSLLDLE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0111 CDS 113171 113710 + hypothetical protein YP_001185617.1 146305152 5106296 Cytoplasmic[Class 3] ATGCAGAAAGGGGGACAGATTTATTTTTGGCCAAGAGGGGGCGATAGTTTCGGGCTGAACCAAGCGATGAACATCAGGATGAAGAAGCGCCCACTGCAACACACCGCACACCAAGTACTGCTATGCGCCCTGTCCTGCGGATACCTGGCAGGCTGCAGCGCCCTTGAACTCGAAACCATCACCTATCCAGAAGCCCTCACCCACTATCAGGAAGGCGGCGGTATCGAGAATTACCGGTGCGCGCTGGTGCCAGCCGACGAGCAGTACCAAGCCTTGCCTGACTCCCAGCCGATCGCTGTGGAAATCGATGAGGTGCTGTTGGTCAAGATCGACGGCTCTATCCAAGCGCTGCAACAGACCGAAATCACCGAGACCCTCGCGGCATACGCCCATGCTGGCATGAGTGCCAGGCTGTCCACGCTCAGGCAGCTCAACCAGACCGAATACAACGAGTCGGATGACCGCCACGTCGACCTTACCTTCGAGGCGGGCGGCAAGACTACGATCTATAGAACCTTTGGGGAGGCCTGCGGACTCTGA MQKGGQIYFWPRGGDSFGLNQAMNIRMKKRPLQHTAHQVLLCALSCGYLAGCSALELETITYPEALTHYQEGGGIENYRCALVPADEQYQALPDSQPIAVEIDEVLLVKIDGSIQALQQTEITETLAAYAHAGMSARLSTLRQLNQTEYNESDDRHVDLTFEAGGKTTIYRTFGEACGL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0112 CDS 113794 114204 + hypothetical protein YP_001185618.1 146305153 5106297 PFAM: protein of unknown function DUF1311 Unknown[Class 3] PF07007|DUF1311, Protein of unknown function (DUF1311)|28|129|3e-16 COG3755|COG3755, Uncharacterized protein conserved in bacteria [Function unknown]. ATGTTCGGCGTCAATAATAAATATTCATTCTTCTTGCTCTTTTTTACATTCCCAGCTCTTAGCGATGCCATTCAAAAGTCATGTGAAGTGATTGAGGACTCCCAACAAGTCGCCCAGTGCGCGGAATATGCTAAAGGGCAGTCGGATAAGCTTCTGAATTCAGCCTACAGGGCAGCTCTTGATCGCATCAGGCATCAGTACAGGCAAGCGCCCCTGATGGCGGATCAGTATATTTCTCTGCTGCGTGGGGCACAGCGAGAATGGATCAAGCTACGAGACGCCGATTGCAAACTTGAGGCCTTTGAAATAGAGGAAACTGCAGAAGCGTATCAGGTAACTATTAACAACTGCCTAGCAAGGATGAGTAACGATAGGGCAGATTATTTGAAGCACATCGCGCCTGACATATGA MFGVNNKYSFFLLFFTFPALSDAIQKSCEVIEDSQQVAQCAEYAKGQSDKLLNSAYRAALDRIRHQYRQAPLMADQYISLLRGAQREWIKLRDADCKLEAFEIEETAEAYQVTINNCLARMSNDRADYLKHIAPDI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0113 CDS 114401 115450 + hypothetical protein YP_001185619.1 146305154 5106298 Unknown[Class 3] ATGCCAAGATTGCACGGAAATAAACGTGACAGGCGACATTTGGCGCTCACCTCCCTCCTGATGCTGGCCAGTGTCATCGCCCACGCCGAAGCGATCCGCCCCGAAGGCCTGTCCGCACTGCAGGAGCTGCGCATCGCAGAGGGTAACGACGATGCCCAGCGCCTGCTGATCACCGACCGCGCAGACAAGGTAGTGCTCGACACCGGCAAGGTCCTGCCGCGTATCGAGAATGAATTCTCGCCCAACAGCTACGACGGCTACCTGGCAGAGCTGCTCGCCGAGCGCCAGGCCAGGGCAACGGCCATCGATCTGCAGGGCGAGCGCCATGCCCTGCTTTCGCCCACCACCCAGGCAGGGGATTACCTGCTGCTTATCACCCGTGAAGAGGACAATGGCGCCTACAACTTCAACCTGAAGTTCAGGTACGACGGCACCACGAAGTCGTTCGCGCTGAGCCAGATCCTGCTCAACGAGAACGACACCCAGTGCGACCAGTCGCTGCTGAGCAGCTATGCGATGGACAGCAAGGCCCTTGGCGCCACGTCGATCGCCGACTTCGATGGTAGCCGCGCCTTCGGCACGCTGAGGGCGTTGCGCCTGGCGCACCAGACATCGGCCAGCACGGCGGAGAAACTGATGCCCGAGGCGGTCGCCAGCAATTTCGACGCCGCTCTGAAGGCTTGCCAGGCGGGTAACGCACAAGAACTGAAAACCCTCGTCGGCTACTTCCTCTCAAGCGACGAGGATGGCGCTTGCGGCCCCGGCAACTATATCGTCGAGAAATACTACTTCCCGCAAAGGGTCGGTTGGTCGAACGACCTGGGCTTTCTGTTCGAGCAGGCCGGTCATTACCCGGAGGCGGTGGAATTGCTGCAGCACATCACCCGCAGGCACCCGGACAGGGTCGTCGCCAACCTCAACCTGGCGGATGCCTACTGGGCGCTGGGCGAGCGGGAGCAGGCCCGGGAAGCCTACGGCCAGTACCATGACAAGATGCTCGCCGCCCAGAAGCAGGCGAGAATTCCGCCGCGAGTACTGGAGCGGAAGTAG MPRLHGNKRDRRHLALTSLLMLASVIAHAEAIRPEGLSALQELRIAEGNDDAQRLLITDRADKVVLDTGKVLPRIENEFSPNSYDGYLAELLAERQARATAIDLQGERHALLSPTTQAGDYLLLITREEDNGAYNFNLKFRYDGTTKSFALSQILLNENDTQCDQSLLSSYAMDSKALGATSIADFDGSRAFGTLRALRLAHQTSASTAEKLMPEAVASNFDAALKACQAGNAQELKTLVGYFLSSDEDGACGPGNYIVEKYYFPQRVGWSNDLGFLFEQAGHYPEAVELLQHITRRHPDRVVANLNLADAYWALGEREQAREAYGQYHDKMLAAQKQARIPPRVLERK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0114 CDS 115461 115928 - hypothetical protein YP_001185620.1 146305155 5106299 Unknown[Class 3] ATGAAAGCTGCCGCCCTGCTCTTGCTGTGCCTGCTGTCGACCGCCGCACTGGCCCTGGAGCCCGGCGAGCGCCTGGCGCCCTGGACGCTGCTCGATCAGCATGACGTGCCCTACACCCTGAACGACGAAACCCGCATCCTGCTGGTCGCCCGCGACATGGCCGGCGCCAAGCTGGTCAGTGCCGCCCTTGAAGGCAAGCCCAAGGGCTACCTGGAAGAGCGCCAGGCGGTCTTTCTCGCCGATATCAGCCGCATGCCCGGCGTCATCGCCAGCCTCTTCGCCCTGCCGAAGATGCGCGACTACAACTACCGCATCCTCCTCGACCGCGACGCCCGCATCGCTCCCCGTTATCCGGCTGGCGAGGGCGAAGTGTTGTGGTTGCAGTTGGAGGATGGTCGCCTGCTGACGCAGCAGGCATTCAAGGAAGCGGGCGCGCTGGAGCAGGCATTGGCCGCAGAGCGGCCCTGA MKAAALLLLCLLSTAALALEPGERLAPWTLLDQHDVPYTLNDETRILLVARDMAGAKLVSAALEGKPKGYLEERQAVFLADISRMPGVIASLFALPKMRDYNYRILLDRDARIAPRYPAGEGEVLWLQLEDGRLLTQQAFKEAGALEQALAAERP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0115 CDS 115947 116483 - hypothetical protein YP_001185621.1 146305156 5106300 Unknown[Class 3] COG3495|COG3495, Uncharacterized protein conserved in bacteria [Function unknown]. ATGCGCCACCTGCTTCTCGCCCTGCTGCTGTGCACCGGCCTGGCCCACGCCGAACTGCCGGAAACCGACTGGCTCGACCTGATGCCGCCCGAGGACCGCAAGGCCCTCGAGGAGATGCCCGAAATCAGCCACGACAGCCCGGAGGGTGACAGCACCTTCTACAGCGAAGGCGGCCTGCGCCAGCAGGACCAGGACCTGCCGGCCGTGATGTACTCCACCAAGACCGTGACCGAACTCGACGGCAAGGACATTCGCCTGGGTGGCTATCCCGTGCCGCTGGAAAGCGACGAGAAAGGCAACAGCACCCTGTTCTTCCTGGTGCCCTATCCGGGCGCCTGCATCCACGTGCCCCCACCGCCGCCCAACCAGCTGGTGCTGGTGCGCTACCCCAGGGGCATTGCGCTCGAAGACATCTACGCCCCGCTGTGGGTCAGCGGCACGCTGAAGGTGGAAAAGATCAGCAACGACCTGGCCGACGCCGCCTACGCCATGGACGCTGGCGAAGTGCGTCTGGTGACCGACGAAGACCTCTACTGA MRHLLLALLLCTGLAHAELPETDWLDLMPPEDRKALEEMPEISHDSPEGDSTFYSEGGLRQQDQDLPAVMYSTKTVTELDGKDIRLGGYPVPLESDEKGNSTLFFLVPYPGACIHVPPPPPNQLVLVRYPRGIALEDIYAPLWVSGTLKVEKISNDLADAAYAMDAGEVRLVTDEDLY Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0116 CDS 116572 116817 - Transglycosylase-associated protein YP_001185622.1 146305157 5106301 PFAM: Transglycosylase-associated protein Cytoplasmic Membrane[Class 3] COG2261|COG2261, Predicted membrane protein [Function unknown]. ATGGGTATTATCGGCACCATTTTCATCGGTCTGATCGTCGGCCTCGTCGCCCGCTTCCTCAAACCTGGCGATGACAGCATGGGCTGGATCATGACCATCCTGCTCGGCATCGGCGGCTCCATCGCCGCCACCTACGGCGGCCAGGCGCTGGGCATCTATGAAGCCGGGGAGGCCGCCGGTTTCATCGGTGCGGTGATCGGCGCCGTCGTTCTGCTGGTAATCTACGGCGCGATCAAGAAAGGCTGA MGIIGTIFIGLIVGLVARFLKPGDDSMGWIMTILLGIGGSIAATYGGQALGIYEAGEAAGFIGAVIGAVVLLVIYGAIKKG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0117 CDS 116883 117647 - amino acid ABC transporter periplasmic protein YP_001185623.1 146305158 5106302 Unknown[Class 3] PF00497|SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3|31|246|5e-13 COG0834|HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]. ATGAAGCGCCTGCTTGCCCTCCTGCCCATGCTCGTTGCCCTGACCTGCGTCGGGGCGCAGGAGGTTCTGCGGGTCGACTTCCGCGAACGCCCACCGGAAATGCGCGCGGTCGACGGTATCCCCAGCGGCCCGCTGATCAGCGTGCTGGAAACCGCCGCGCAGCGCATCGGCGTGCGCCTGCACTGGCGCCAGGCGCCTTTCCTGCGCAGCCTCGACGACCTGCGCTCGGGCCGCGTCGATCTGGTACCGCGCGTGCTGCTCACCGAGCAGCGTCGCGAGTACATCCACTTCCTGCCGAGCATCGGCAACCAGCAGCTGAACATCCGCTTCGTCGTCCATCCGGGGCGCGAAGCCGGGCTGAAACGCTATGAGGATCTGCACCGTCTCTCGGTAGGGGTCAAACGCGGCACGGTCTATTTCGAACCTTTCGACAGCGACGAGCGCCTGGCACGGGTCTATGCCAGCGACGATGCACAGCTGGCCGCGATGTTTCGCGCCGGACGCCTCGACACCATTGCCGTGCTGGACATGATGCCGATGGAGGCGCAGTTCACCGCACTGGGCTTTGAGGACTTCAGCTATGCCCATTACGCGCACCGCCAGGTGCTCGGCAATCACTTCGGCGCCTCGCTCAAGCGCTACCGCAGCGACCGCCGGGAACTCTACAACCGTCTGGCCGGCGAGCTCGAGCGCATGCGCGACGAGGGAGAAGTCGCCCTGATCTACCGGCGCTATGGCGTGCTGCCACCGGATGAGGCGAACTGA MKRLLALLPMLVALTCVGAQEVLRVDFRERPPEMRAVDGIPSGPLISVLETAAQRIGVRLHWRQAPFLRSLDDLRSGRVDLVPRVLLTEQRREYIHFLPSIGNQQLNIRFVVHPGREAGLKRYEDLHRLSVGVKRGTVYFEPFDSDERLARVYASDDAQLAAMFRAGRLDTIAVLDMMPMEAQFTALGFEDFSYAHYAHRQVLGNHFGASLKRYRSDRRELYNRLAGELERMRDEGEVALIYRRYGVLPPDEAN Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0118 CDS 117703 118788 - phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001185624.1 146305159 5106303 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunitPFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp ; With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway Purine metabolism [KEGG] ; Metabolic pathways [KEGG] 4.1.1.21 Cytoplasmic Membrane[Class 3] biological_process|GO:0009152|purine ribonucleotide biosynthetic process|IEA ; cellular_component|GO:0009320|phosphoribosylaminoimidazole carboxylase complex|IEA ; molecular_function|GO:0004638|phosphoribosylaminoimidazole carboxylase activity|IEA ; molecular_function|GO:0016887|ATPase activity|IEA TIGR01161|purK|phosphoribosylaminoimidazole carboxylase, ATPase subunit|equivalog_domain|1.6e-137|4.1.1.21|Purines, pyrimidines, nucleosides, and nucleotides|Purine ribonucleotide biosynthesis PF02222|ATP-grasp, ATP-grasp domain|97|272|1e-65 COG0026|PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]. ATGAAGATCGGCGTGATCGGTGGCGGCCAGCTGGGCCGCATGATGGCCCTGGCAGGTACGCCGCTGGGCATGAACTTCGCCTTCCTCGACCCGGCGCCGGACGCCTGCGCCCAGGCGCTTGGCGAGCATATCCGCGCCGACTACGGCGATCAGGATCACCTGCGCCAGCTGGCCGACGAGGTCGATCTGGTCACCTTCGAATTCGAGAGCGTGCCGGCGGAAACCGTGGCCTTCCTCTCGCAGTTCGTGCCGGTCTACCCGAGCGCCGAAGCCCTGCGCATCGCCCGTGACCGCTGGTTCGAGAAGTCCATGTTCCGCGAGCTGGGCATTCCCACGCCGGAGTTCGCCGATATCCAGTCGCAGACCGACCTCGATGCCGCGGTGGCCAGCATCGGTCTGCCGGCAGTGATGAAGACCCGCACCCTGGGCTATGACGGCAAGGGCCAGAAGGTCCTGCGCAAGCCGGAAGACGTCACCGGCGCCTTCGCCGAGCTGGGCAGCGTGCCGTGCATCCTCGAAGGCTTCGTACCCTTTACCGGCGAGGTGTCGCTGATCGCCGTGCGCGCCCGCGACGGTGAAACCCGCTTCTACCCGTTGGTGCACAACACCCACGACAGCGGCATCCTCGCCCTGTCCATCGCCAGCACCGATCATCCGCTGCAGGCGCTGGCCGAAGACTACGTCGGCCGCGTGCTGGACAAGCTCGACTACGTCGGCGTGCTGGCCTTCGAGTTCTTCGAGGTGGACGGCGGCCTCAAGGCCAACGAGATCGCCCCGCGCGTGCACAACTCCGGGCACTGGACCATCGAGGGCGCCGAGTGCAGCCAGTTCGAGAACCATCTGCGTGCCGTCGCCGGCCTGCCGCTGGGCTCCACCGCCAAGCTGGGCGAGAGCGCCATGCTCAATTTCATCGGCGAAGTGCCGCCGGTGGACAAGGTGATCCGCATCGCCGACTGCCATCTGCACCACTACGGCAAGGCCTTCAAGGTCGGCCGCAAGGTCGGTCATGCCACCCTGCGCAGTGCCGATCGGGCCACCCTGAATACCGGCATCGCAGCGGTTCAGGCCCTGATCGCCAAGGGCTGA MKIGVIGGGQLGRMMALAGTPLGMNFAFLDPAPDACAQALGEHIRADYGDQDHLRQLADEVDLVTFEFESVPAETVAFLSQFVPVYPSAEALRIARDRWFEKSMFRELGIPTPEFADIQSQTDLDAAVASIGLPAVMKTRTLGYDGKGQKVLRKPEDVTGAFAELGSVPCILEGFVPFTGEVSLIAVRARDGETRFYPLVHNTHDSGILALSIASTDHPLQALAEDYVGRVLDKLDYVGVLAFEFFEVDGGLKANEIAPRVHNSGHWTIEGAECSQFENHLRAVAGLPLGSTAKLGESAMLNFIGEVPPVDKVIRIADCHLHHYGKAFKVGRKVGHATLRSADRATLNTGIAAVQALIAKG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0119 CDS 118788 119279 - phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_001185625.1 146305160 5106304 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunitPFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase ; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase Purine metabolism [KEGG] ; Metabolic pathways [KEGG] 4.1.1.21 Unknown[Class 3] biological_process|GO:0009152|purine ribonucleotide biosynthetic process|IEA ; cellular_component|GO:0009320|phosphoribosylaminoimidazole carboxylase complex|IEA ; molecular_function|GO:0004638|phosphoribosylaminoimidazole carboxylase activity|IEA TIGR01162|purE|phosphoribosylaminoimidazole carboxylase, catalytic subunit|equivalog_domain|2.5e-105|4.1.1.21|Purines, pyrimidines, nucleosides, and nucleotides|Purine ribonucleotide biosynthesis PF00731|AIRC, AIR carboxylase|3|154|2e-65 COG0041|PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]. ATGAGCGCACTGGTTGGCGTGATCATGGGCTCCAAGTCCGATTGGTCCACCCTTAGCCACACCGCCGAGATGCTGGACAAGCTGGGCATTCCCCACGAGGTCAAGGTGGTCTCCGCCCACCGTACCCCGGACCTCCTGTTCCAGTACGCCGAAGAGGCGGAAGCCCGCGGCATCCAGGTGATCATCGCCGGTGCCGGTGGCGCCGCTCACCTGCCGGGTATGTGCGCGGCCAAGACCCACCTGCCGGTGCTTGGCGTGCCGGTGCAGTCGTCCATGCTCTCGGGCGTCGACTCGCTGCTGTCGATCGTGCAGATGCCGGCCGGCATCCCGGTCGCCACCCTGGCCATCGGCAAGGCCGGCGCGGTCAACGCCGCCCTGCTCGCCGCCAGCATCCTCGGTCACCAGCACCCGCAGTTCCATGCGGCGCTCAAGCAGTTCCGCGACGAGCAGACCAACACCGTGCTGGAAAATCCGGACCCGAGGGCGCAGTAA MSALVGVIMGSKSDWSTLSHTAEMLDKLGIPHEVKVVSAHRTPDLLFQYAEEAEARGIQVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGIPVATLAIGKAGAVNAALLAASILGHQHPQFHAALKQFRDEQTNTVLENPDPRAQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0120 CDS 119556 120578 + alcohol dehydrogenase YP_001185626.1 146305161 5106305 PFAM: Alcohol dehydrogenase, zinc-binding domain protein ; PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein Glycolysis / Gluconeogenesis [KEGG] ; Fatty acid metabolism [KEGG] ; Tyrosine metabolism [KEGG] ; 1- and 2-Methylnaphthalene degradation [KEGG] ; 3-Chloroacrylic acid degradation [KEGG] ; Metabolism of xenobiotics by cytochrome P450 [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic[Class 3] biological_process|GO:0006113|fermentation|IEA ; molecular_function|GO:0004024|alcohol dehydrogenase activity, zinc-dependent|IEA ; molecular_function|GO:0008270|zinc ion binding|IEA TIGR02822|adh_fam_2|zinc-binding alcohol dehydrogenase family protein|subfamily|8.5e-49|1.-.-.-|Energy metabolism|Fermentation PF00107|ADH_zinc_N, Zinc-binding dehydrogenase|168|303|2e-29 ; PF08240|ADH_N, Alcohol dehydrogenase GroES-like domain|29|135|2e-34 COG1064|AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]. ATGAACCCGACCATGAAAGCCGCAGTGGTCCACGCCTTCGGCCAGCCGCTGCGTATCGAGGAGGTGAAAACCCCGCTACCCGGCCCGGGGCAGATTCTGGTGAAGATCGAGGCTTCCGGCGTCTGCCACACCGACCTGCACGCAGCCGAGGGCGACTGGCCGGTGAAGCCGAGCCTGCCGTTCATTCCCGGCCATGAAGGGGTTGGCTACGTGGCGGCGGTCGGCAGCGGCGTGACCCGGGTCAAGGAGGGCGACCGTGTCGGCGTGCCCTGGCTGTACAGCGCCTGTGGCTGCTGCGAGCACTGCCTGACCGGCTGGGAGACGCTTTGCGAGAGCCAGCAGAACACCGGCTACTCGATCAACGGCGGCTATGCCGAGTACGTGCTGGCTGACCCCAACTACGTCGGCATCCTGCCGAAGAACGTCGACTTCCTCGAGATCGCGCCGATCCTCTGTGCCGGGGTGACGGTGTACAAGGGCCTCAAGGAAACCAGGGCGCGGCCCGGCCAGTGGGTGGTCATCTCCGGTATCGGCGGCCTCGGTCACGTCGCCGTGCAGTACGCCCGCGCCATGGGCTTGCACGTGGTCGCGGTGGATGTCGACGACGCCAAGCTGGAGCTGGCGCGCAGGCTCGGCGCCAGCCTGACCATCAACGCACGCCAGGAAAACCCGGCCGAGGTGGTGCAACGCGAGATCGGCGGCGCCCACGGTGTGCTGGTTACCGCGGTGTCCAACGCCGCCTTCGGCCAGGCCATCGGCATGGCGCGTCGGCACGGTACGGTGGCCCTGGTCGGCCTGCCGCCGGGCGACTTCCCCACGCCGATCTTCGATGTGGTGCTCAAGGCCATCAGCATCACCGGCTCCATCGTCGGCACCCGCGCCGATCTGCAGGAGGCGCTGGACTTCGCCGGCGAAGGCCTGGTCAGGGCCACGGTGCACAGCGACAGGCTGGACAACATCAATGCCATCTTCGAGCAGATGCGCCAGGGGCAGATCGAGGGACGCATGGTGCTGCAGTTCTAG MNPTMKAAVVHAFGQPLRIEEVKTPLPGPGQILVKIEASGVCHTDLHAAEGDWPVKPSLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGVPWLYSACGCCEHCLTGWETLCESQQNTGYSINGGYAEYVLADPNYVGILPKNVDFLEIAPILCAGVTVYKGLKETRARPGQWVVISGIGGLGHVAVQYARAMGLHVVAVDVDDAKLELARRLGASLTINARQENPAEVVQREIGGAHGVLVTAVSNAAFGQAIGMARRHGTVALVGLPPGDFPTPIFDVVLKAISITGSIVGTRADLQEALDFAGEGLVRATVHSDRLDNINAIFEQMRQGQIEGRMVLQF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0121 CDS 120683 121477 + hypothetical protein YP_001185627.1 146305162 5106306 Unknown[Class 3] ATGAAACAGTACGTTTCGCTCGTTGCCCTTTCCCTGCTCTCGCTGCAGGCCGCCGCCCTGGAGCTGGCCAGGCATCCTCAGGTGTTCGATGCCGGCCAGGGCGTCAGCCTGACCCTCGCCCCGACCGCCGACGGCAAGCAGGCCCTGGTGCAGGTCAAGGGCATCAACCATCCGCTCGACGAGGTGGTGTTCCTCACCCAGGTGCGCGAGCTGGGCAACGAGCAGCGCGACTACGGCATTCGCCTCGACGGCCGTGACTACAACCTGCTGAACAAGCGTCGTGCCTGGAGCGGCGAGAGTTTTCAGCTCAACCTGCCGGGCACCGAAGGCTTCGAGCTGGGTTACAACGAGACGAAGACCAAGGCCCTCAAGCAGAGCGAGCTGCTGGCGTTGTACAAGCGCCAGGAAAAGGCCGGCCTGCAGGCTCGCCTCGCTGCCTTCGATCGCAAGAAGCGGGTGCAGGACTACAGCGCCCGCCTGCAGCAGATGGACCGCGAAGCGACCCAGGCCTGTGGCACGCCGCTGGCGACCAGGGTGGACTGGAGCGCCTTCAACGATGACTTGCTGATGAGCGTCAGCGTGCCGCATTTCTGCGGCGAAGTGGTCAGCCAGATGGCCAGCCTCTGCGGCCGCGCCGACAGCTACAAGAGCGAGGCCAGCACCATCAAGGGCGTCGAATGCCGGTTCGGTGACAGCATGAAGCTGCGCGAGCACGATGGCCAACTCTCGTTCACCACCCTCAAGGACGAACCGAATCAGGGCGATTTCATCAACGCCATTTTGCGCAATCGCTGA MKQYVSLVALSLLSLQAAALELARHPQVFDAGQGVSLTLAPTADGKQALVQVKGINHPLDEVVFLTQVRELGNEQRDYGIRLDGRDYNLLNKRRAWSGESFQLNLPGTEGFELGYNETKTKALKQSELLALYKRQEKAGLQARLAAFDRKKRVQDYSARLQQMDREATQACGTPLATRVDWSAFNDDLLMSVSVPHFCGEVVSQMASLCGRADSYKSEASTIKGVECRFGDSMKLREHDGQLSFTTLKDEPNQGDFINAILRNR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0122 CDS 121557 122549 + AraC family transcriptional regulator YP_001185628.1 146305163 5106307 PFAM: helix-turn-helix- domain containing protein, AraC type Cytoplasmic[Class 3] COG2207|AraC, AraC-type DNA-binding domain-containing proteins [Transcription]. ATGCTGCATGCCCCGCTGACCACCCTGCACGTGGTTTCCCTGATCCTGCAACGTTTCGCCGACCAGCCCGAACTGCAGCCGCAACTGTTGGCCGGCAGCGGCATCGGTGCGGCCGAGCTGGAGTGCCCCGATGCTCGCATCACCCGGGTGCAGGAGCTGCAGGTCTGTGCCAACGCCCTGGCCCTGCGCGCCGACATGGGGCTGGAGCTGGGGCGCAGTCTGCATGTTTCCTCCTATGGGCTGCTTGGTTACGCCGCGCTCTCGGCTGCCACCTTTGGTGACGCCTGGCGCCTGCTGCTGCAGTACCCGGCGCTGCTTGGCACCTACTTCCGCCTGGAGCTGCAGGTGGAGGGCGAGCTGGCCTGGATCTGCGCGGGTGGCTACCGCGATGCCGCGACGCTGGAGGTGTTCAACGTGGAGATGTGCCTGGCCTCGCTGAAACTGATCGGTGACGAGCTGCTGGGCCAGCCGCTGGCGCTGGCGCGCGCCGAATTCAGCTACGCCGAGCCGCATTACGTCGAGCGCTATGCGCAGAGCTTTCCCTGCCCGCTGCGTTTCGCGGCGCGGCGCAATGCCTTCGCCTTTCCCGCGGCGCTGCTGGAGCGCCGCCTGCCGCTGGCCGACAGCGTCACCCATGGCGACATGGTGGAACGCTGCCGTCGCCTGAACGCCGAGTTCAGCAGCCGCCAGGCCTGGCTGGAACGGGTACGCCAGCTGCTCGCCGTGCAACTGGCCGAGCCGCCGGGGCTGGAAAATCTGGCGCAGCAGATGCACTGCTCACCGCGCACGCTGCGTCGCCACCTGCAGGAGCTGGGCACCAGCTACCAGGGCCTGCTCGACGAGCTGCGCTTCGAACGTGCCAAGGCGCTGCTCAGCGAGGAGCAATGGCCGGTGTATCGCATCGCCGAGGTGCTCGGCTTCAGCGAGACCGCCAGCTTCCGCCATGCCTTCCAGCGCTGGAGCGGCGTACCGCCGAGCCGCTTTCGCGCTTGA MLHAPLTTLHVVSLILQRFADQPELQPQLLAGSGIGAAELECPDARITRVQELQVCANALALRADMGLELGRSLHVSSYGLLGYAALSAATFGDAWRLLLQYPALLGTYFRLELQVEGELAWICAGGYRDAATLEVFNVEMCLASLKLIGDELLGQPLALARAEFSYAEPHYVERYAQSFPCPLRFAARRNAFAFPAALLERRLPLADSVTHGDMVERCRRLNAEFSSRQAWLERVRQLLAVQLAEPPGLENLAQQMHCSPRTLRRHLQELGTSYQGLLDELRFERAKALLSEEQWPVYRIAEVLGFSETASFRHAFQRWSGVPPSRFRA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0123 CDS 123150 124178 + histone deacetylase superfamily protein YP_001185629.1 146305164 5106308 PFAM: histone deacetylase superfamily Cytoplasmic[Class 3] PF00850|Hist_deacetyl, Histone deacetylase domain|28|339|2e-69 COG0123|AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism]. ATGCTCACCTACTACAGTGACGACCACCACCTGCACCACGGCAAATGCGAGCTGATCGACGGGCAGCTGATGCCCTGCTTCGAGAAGCCGCAGCGCGCCGACCATATCCTGCAACGGGTCAAGGATCGCCAGCTCGGCGAAATCCGCGCACCCAAGGATTTCGGCCTGGCGCCCATCGAGCGCATTCACAGCAAGGCCTACCTGGAATTCTTCAAGGGCGCCTGGGCGCGCTGGCAGGAACAGGGCGGCAAGGGCGATCTGCTGCCCTTCACCTGGCCGGCACGTACCCTGCGGCGGATGATCCCCAATGACCTGCACGGCCAGCTCGGCTACTACAGTTTCGATGGCGGCGCGCCGATCACCGCCGGCACCTGGCAGGCCGCCTACAGCGCTGCCCAGGTCGCGCTGAGCGGGCAGGCCGAGATCGCCAATGGCGCCCACAGCGCCTTCGCCCTGTGCCGCCCGCCAGGCCACCATGCCGCCGGCGACGTGATGGGCGGCTACTGCTACCTGAACAACGCCGCCATCGCCGCCCAGGCGTTTCTCGACCAGGGCCGCAAAAAAGTCGCCATCCTCGATGTCGACTACCACCACGGCAACGGCACCCAGGACATCTTCTACCGGCGCAGCGACGTGCTGTTCGCCTCGATCCACGGCGACCCGGCCGAGGAGTTCCCGTTCTTCCTCGGTTATGCCGACGAACTGGGCGAGGGCGCCGGCGAGGGCTACAACTTCAACTATCCGTTGCCCATGGGCAGTTCCTGGGACACCTGGAACGCCGCGCTGGAACAGGCCTGCCAGCGCATCGCCGACTACGGCGCCGAGGTGCTGGTGGTGTCGCTGGGCGTGGACACCTACATGGAAGACCCGATCTCGCAGTTCAAGCTCGACAGCCCTGACTACCTGGCCATGGGCCGGCGTATCGCCGCACTGGGCCTGCCGACCCTGTTCATCATGGAAGGCGGCTACGCGGTGGAGGCCATCGGCGTCAACGCGGTCAACGTGCTGGAAGGCTTCGAGGGCGCCTGA MLTYYSDDHHLHHGKCELIDGQLMPCFEKPQRADHILQRVKDRQLGEIRAPKDFGLAPIERIHSKAYLEFFKGAWARWQEQGGKGDLLPFTWPARTLRRMIPNDLHGQLGYYSFDGGAPITAGTWQAAYSAAQVALSGQAEIANGAHSAFALCRPPGHHAAGDVMGGYCYLNNAAIAAQAFLDQGRKKVAILDVDYHHGNGTQDIFYRRSDVLFASIHGDPAEEFPFFLGYADELGEGAGEGYNFNYPLPMGSSWDTWNAALEQACQRIADYGAEVLVVSLGVDTYMEDPISQFKLDSPDYLAMGRRIAALGLPTLFIMEGGYAVEAIGVNAVNVLEGFEGA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0124 CDS 124242 125336 + extracellular solute-binding protein YP_001185630.1 146305165 5106309 PFAM: extracellular solute-binding protein, family 1 ABC transporters [KEGG] Periplasmic[Class 3] PF01547|SBP_bac_1, Bacterial extracellular solute-binding protein|35|298|3e-07 COG0687|PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. ATGAAAGCCATCAAACAGATGCTCGGCGTCGCCCTGTGCGGCGCCACCCTGCTCAGCGGCGCGGTGCAGGCCAAGGAGCTGCGCGTTTACAACTGGGCGGATTACATCCTCCCGGAGGTGCCCAAGGACTTTCAGAGGGAGTCCGGCATCCGCATCACCTGGGACACCTTCGAGACCAACGAGGCGCTGGAGGCCAAGCTGCTCACCGGCAACTCCGGTTATGACCTGGTGATTCCGTCCAACCAGTTCCTCGAAACCCAGATCAAGGCCGGCGTGTTCGCCCCGCTGGACAAGTCCAAGCTGCCCAACTGGAAGAACCTCGACCCGGTACTGCTCGGCCTGCTGGAGAAGAACGACCCCGGCAACCAGTACGGCGTGCCCTACATGTACGGCACCGTGCTGATCGGCTACAACCCGGACAAGGTCAAGGCTGCGCTCGGCGATGATGCCCCGGTCAACAGCTGGGATCTGGTGTTCAAGCCCGAGTACATGGAGAAGCTGAAATCCTGCGGCGTGGCTATGCTCGACTCGCCCACCGAGATCATCCCCATCGCCCTGCACTACCTGGGCCTGGACCCCAACAGCAGCAATCCCGCCGACTATGACAAGGTCACCGAGCTGCTGCTCAAGGTGCGCCCCTACGTGGCCTACTTCCATTCCGCCAAGTACATGACCGACATCGCCAACGGCGACATCTGCGTGGCCATCGGCTACTCCGGCAGCTTCTACCAGTTCGCCAACCGCGCCAAGGAAGCCGGCAACGGTGTGGTGATCAACTGGCGCCTGCCCAAGGAAGGCGCGCCGATCTGGTTCGACACCTGGGCCATCCCCAAGAGCGCGCAGAACGTCGATGAAGCCCATGCCTTCATCAACCACCTGCTCGATCCCAAGGTCATCGCGCCGATCAGCGACTTTCTCGGCTACCCTAACCCCAACGTGCCGGGCATGCAGCTGGTGGGCGCGGAGATCGCCGACGATGCCGATCTGACGCCGACGCCGGAGCTGCAGAAGTCGCTCTACGTAGTGCAGCCGCTGCCGCAGAAGATCGAGCGGGTGCGTACGCGCGCCTGGACATCGATCAAGTCGGGCAAGTGA MKAIKQMLGVALCGATLLSGAVQAKELRVYNWADYILPEVPKDFQRESGIRITWDTFETNEALEAKLLTGNSGYDLVIPSNQFLETQIKAGVFAPLDKSKLPNWKNLDPVLLGLLEKNDPGNQYGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPNSSNPADYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGYSGSFYQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQNVDEAHAFINHLLDPKVIAPISDFLGYPNPNVPGMQLVGAEIADDADLTPTPELQKSLYVVQPLPQKIERVRTRAWTSIKSGK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0125 CDS 125368 126345 - transcriptional regulator YP_001185631.1 146305166 5106310 PFAM: helix-turn-helix- domain containing protein, AraC type ; PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein Cytoplasmic[Class 3] TIGR01383|not_thiJ|DJ-1 family protein|subfamily|1.8e-05||Unknown function|General PF01965|DJ-1_PfpI, DJ-1/PfpI family|43|183|3e-17 ; PF00165|HTH_AraC, Bacterial regulatory helix-turn-helix proteins, AraC family|275|319|7e-06 COG4977|COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]. ATGAAGGTCACGGTGGTGATGGCCGAGCGCTGCTCGGCCACCAGCGTCTCGGCGGCGCTGGAGTTTCTCGAATGCGCCAACGTGCTGCAGCGCTTTCTCACCGGCGACCCGGCGGCGACGCCGTTCGAGGTGCACAGCGCCTCCCTCGACGGCGCCCCGGTCGAGTGCACCGGCGGCCTGCGCCTGACCCCGCAGCGGGCGCTGAGCGAGGTGCCGCACAGCGATCTGGTGATAGTGCCCGGCTTCATGTTCAACATCCTCGCCGTGCTGCCGGCCCTGGAGCCGCTGAGCGCCTGGCTGCGCGAGCGCCATGCGCAGGGCAGCTACATCGCCAGCATGTGCACCGGCACCTTCGTCACCGCCCAGGCCGGCCTGCTCGACGGTCGCCGCGCCACCACCCACTGGATCTTCAGCGAGCAGTTCGCCCGGCGTTTTCCGCGGGTGCTGCTGCAGGCCGAACGCAGCGTCACCGACGACGGCCAGCTGCTGTGCTCGGCCGGCTCCACCACCGGCAGCGACCTGCTGCTGCACATCATCCGCCGCTTCGCCTCGCCGCAGCTGGCCATCGAGTGCTCGAAGAAGCTCCTGGTCGACAGCGCCGAGCGCCTGCAGACGCCCTACATGAGCGCCTCGTTCAACAAGACGCATCAGGACGCCGAGGTGCTCAGGGTGCAGATCTGGCTGGAGAAGCACAGCGCCGAACGCATCGTCCTCGACGAGGTCGCCGCGCGCTTCGCCCTGAGCCCGCGCAATCTGATCCGCCGCTTCAAGGACGCCACCGGGCAGACGCCGGTGCAGTACCTGCAGAACCTGCGACTGGAGCGGGCCAAGCACCTGCTGGAGGCCAGCCAGGAAAACTTCGAGCGCATCACCCAGCAGGTCGGCTACGAGGACGGCAGTTCCTTCCGCCGCCTGTTCAAGGAACGCGTCGGCCTGTCGCCGGGCGCCTACCGGCGACGCTTCAACCGCCCTACCTGA MKVTVVMAERCSATSVSAALEFLECANVLQRFLTGDPAATPFEVHSASLDGAPVECTGGLRLTPQRALSEVPHSDLVIVPGFMFNILAVLPALEPLSAWLRERHAQGSYIASMCTGTFVTAQAGLLDGRRATTHWIFSEQFARRFPRVLLQAERSVTDDGQLLCSAGSTTGSDLLLHIIRRFASPQLAIECSKKLLVDSAERLQTPYMSASFNKTHQDAEVLRVQIWLEKHSAERIVLDEVAARFALSPRNLIRRFKDATGQTPVQYLQNLRLERAKHLLEASQENFERITQQVGYEDGSSFRRLFKERVGLSPGAYRRRFNRPT Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0126 CDS 126485 127327 + Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein YP_001185632.1 146305167 5106311 Unknown[Class 3] PF00326|Peptidase_S9, Prolyl oligopeptidase family|112|271|1e-07 ; PF00561|Abhydrolase_1, alpha/beta hydrolase fold|89|254|2e-06 COG1506|DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]. ATGAAACATACAGCCTACCGGCTCTTCAAAAAACCCTTTTTCGGGCGCTTCATGAAGCCCTGGCGCTGGCCCGAACAGGTCGATGCGGCGCGCTGGCAGCGCCTGGCGCTGACCAGCGAATCGGGGGCGAATCTGGCCGCGCTGCTGGGCGAGGCGCGCGCGGGGCAGGTGCGCGGCGCGGTGCTGCTGTGCCACCCGATGGGCGCCGCGGCCAAGGGCTTCTGGCTCAAGCACGGGCACGCCGAACTGCTGCGCGCGGCCGGTTATCACGTGATGCTGTTCGACCTCAACGGCTTCGGCGAGAGCAGTTCCACCACCATGGACTACCCGCTCGACGTGCTCGCCGCCGGGCAGGCGCTGCAGGCGCGCTACCCGGACCTGCCGGTGGCGCTGCTCGGCGCCTCGATGGGCGCGGCCATGGGCCTGTGCGCCCTGGCGCTGGCGCAGCATCCGTTCAAGGCGGCGGTGCTGGAGTCGGCCTTCCCCACCCTGCTGCACTTCTGGCGGCCCTACCCGCTGCCGCGCCTGGGCATCCAGCTCAGCCGCCTGGTCTATCCGGCCGGCGAGCGCCGTCTGCGCCCGCTGCATGCCGCACAGCGCCTGGTCGGCCGCCCGCCATTGCTGCTGATCTACGGCGAGGAAGATCGCCACACCCCGCTCGCGGACGGCCAGCAACTGCACGCGGCGCTGACCGCCGCCACCCATTGCGAGTTCTGGCAGGTACCGGGCGCCGATCATACCCTGGCCTATGTCGCCCAGCCGGAGGCCTATGCGCGGCGGGTGCTGGAGTTTCTCGATGGCCAACTGGGCGCCGCGGCAGGTTCCGCCTCCACGGCGGCGTAG MKHTAYRLFKKPFFGRFMKPWRWPEQVDAARWQRLALTSESGANLAALLGEARAGQVRGAVLLCHPMGAAAKGFWLKHGHAELLRAAGYHVMLFDLNGFGESSSTTMDYPLDVLAAGQALQARYPDLPVALLGASMGAAMGLCALALAQHPFKAAVLESAFPTLLHFWRPYPLPRLGIQLSRLVYPAGERRLRPLHAAQRLVGRPPLLLIYGEEDRHTPLADGQQLHAALTAATHCEFWQVPGADHTLAYVAQPEAYARRVLEFLDGQLGAAAGSASTAA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0127 CDS 127469 128371 - LysR family transcriptional regulator YP_001185633.1 146305168 5106312 PFAM: regulatory protein, LysR ; PFAM: regulatory protein, LysR; LysR, substrate-binding Cytoplasmic Membrane[Class 3] biological_process|GO:0019619|protocatechuate catabolic process|IEA ; biological_process|GO:0045893|positive regulation of transcription, DNA-dependent|IEA ; molecular_function|GO:0016563|transcription activator activity|IEA TIGR02424|TF_pcaQ|pca operon transcription factor PcaQ|equivalog|2.3e-06||Energy metabolism | Regulatory functions|Other | DNA interactions PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|6|63|6e-14 ; PF03466|LysR_substrate, LysR substrate binding domain|89|299|1e-16 COG0583|LysR, Transcriptional regulator [Transcription]. ATGAACCTAGAAACCAAATGGCTGGAGGACTTCATCGCCCTGGCCGCCACCCGCAGCTTCTCCCAGGCGGCGGACAAGCGCTTCGTCACCCAGCCGGCCTTCAGCCGGCGCATCCGCAGCCTGGAGGCGATGCTCGGCCTGACCCTGGTCGACCGCTCCTGTACCCCCATCGAACTGACCGAGGCCGGGCGGCTGTTTCTGGTCACCGCGCGCAGCCTGGTCGAGCAGCTCGGCGAGGTGGTGCGTCATCTGCACAACCTGGAGGGCCAGCAGGGCGAGGTGCTGTCGATCGCCGCCGCGCACTCGCTGACCCTGGGCTTCTTCCCCGAATGGATCGCCCGCCTGCGCCGCGAAGGCCTGCCACTGACCACCCGCCTGGTGGCGACCAACGTCGGCGAGGCGGTGCACTCGCTGCGTGAAGGCGCCTGCGACCTGATCCTTGCCTACTACGACCCGGACGCCGCGTTGCAGATGGACCCGGAGATCTTTCCCTCGCTGCACCTGGGCACCACCTCCATGCTGCCGGTGTGCGCGGTTGGCGAGGCCGGCGCGCCGCTGTTCGACCTCGACGGCGGACAGAGCGTGCCTCTGCTGGCCTACAGCGCCGGCGCCTTTCTCGGTCGCTCCGTCAATCTGCTGCTGCGCCAGCGCGCCCTGCGCTCGACCACGGTGTACGAGACCGCCATGGCCGACAGCCTCAAGAGCATGGCCCTGCAGGGCATGGGCGTGGCCTGGGTGCCACGGCTGTCGGTGACGGCGGAGCTGGGCCGTGGCGAGCTGGCGATCTGCGGCGGCGAACACTGGCAGATCCCGCTGGAAATCCGCCTGTACCGCTGCGCCCTGGTACGCAAGGCGGCGGTGCGCCTGCTGTGGCGCAAGCTGGAGGGTGGCCTGGCCATGTAG MNLETKWLEDFIALAATRSFSQAADKRFVTQPAFSRRIRSLEAMLGLTLVDRSCTPIELTEAGRLFLVTARSLVEQLGEVVRHLHNLEGQQGEVLSIAAAHSLTLGFFPEWIARLRREGLPLTTRLVATNVGEAVHSLREGACDLILAYYDPDAALQMDPEIFPSLHLGTTSMLPVCAVGEAGAPLFDLDGGQSVPLLAYSAGAFLGRSVNLLLRQRALRSTTVYETAMADSLKSMALQGMGVAWVPRLSVTAELGRGELAICGGEHWQIPLEIRLYRCALVRKAAVRLLWRKLEGGLAM Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0128 CDS 128663 130087 + aspA aspartate ammonia-lyase YP_001185634.1 146305169 5106808 TIGRFAM: aspartate ammonia-lyasePFAM: fumarate lyase ; catalyzes the formation of fumarate from aspartate Alanine, aspartate and glutamate metabolism [KEGG] ; Nitrogen metabolism [KEGG] ; Metabolic pathways [KEGG] 4.3.1.1 Cytoplasmic[Class 3] biological_process|GO:0006520|amino acid metabolic process|IEA ; molecular_function|GO:0008797|aspartate ammonia-lyase activity|IEA TIGR00839|aspA|aspartate ammonia-lyase|equivalog|1.5e-272|4.3.1.1|Energy metabolism|Amino acids and amines PF00206|Lyase_1, Lyase|15|347|2e-97 ; PF10415|FumaraseC_C, Fumarase C C-terminus|413|467|1e-18 COG1027|AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism]. ATGTCCTCTGCTGCATCTGTTCGCGTCGAAAAAGACCTGCTCGGCACCCTCGAAGTCCCCGCCGATGCCTACTACGGCATCCAGACCCTGCGCGCCGTGCAGAACTTCCGCCTGTCCGGCGTGCCGCTGTCGCATTACCCGAAACTGGTGATCGGCCTGGCCATGGTCAAGCAGGCCTCGGCCGACGCCAACCGCGAGCTGGGCCACCTGTCCGCGGCCAAGCACACGGCGATCAGCACCGCCTGCGCACGCATCATCCAGGGCGAGTTCCACGAGCAGTTCGTGGTCGACATGATCCAGGGCGGCGCCGGCACCTCGACCAACATGAATGCCAACGAGGTGATCGCCAACATCGCCCTCGAGGCCATGGGGCATGAGAAGGGCCAGTACCAGCACCTGCACCCGAACAACGACGTGAACATGGCGCAGTCGACCAACGACGCCTACCCGACCGCCATCCGTCTCGGCCTGCTGCTCGGCCACGACAGCCTGCTCAGCGCGCTGGACAAGCTGATCCAGTCCTTCGCCGCCAAGGGCCTGGAGTTCGGCCACGTGCTGAAGATGGGCCGCACCCAGCTGCAGGACGCCGTGCCGATGACCCTCGGCCAGGAATTCCGCGCCTTCGCCACCACCCTCGGCGAAGACCTGCAGCACCTGAAACTGCTGGCGCCGACCCTGCTCACCGAGGTGAACCTGGGCGGTACCGCCATCGGCACCGGCATCAACGCCGACCCGAAATACCAGGCCCTGGCGGTCAAGCGCCTGGCCATCATCAGCGGCCACCCGCTGACCCCGGCTGCCGACCTGATCGAAGCCACCAGCGACATGGGCGCCTTCGTGCTGTTCTCCGGCATGCTCAAGCGCACCGCGGTCAAGCTGTCGAAGATCTGCAACGACCTGCGCCTGCTCTCCAGCGGCCCGCGTACCGGCATCAACGAGATCAACCTGCCGGCGCGTCAGCCGGGCAGCTCGATCATGCCGGGCAAGGTCAACCCGGTGATCCCCGAGGCGGTCAACCAGGTGGCCTTCGAAGTGATCGGCAACGACCTGGCGCTGACCATGGCGGCCGAGGGCGGCCAGCTGCAGCTGAACGTGATGGAGCCGCTGATCGCCTACAAGATCTTCGACTCGATCCGCCTGCTCACCCGCGCCATGGACATGCTGCGCGAGCTGTGCATCGACGGCATCACCGCCAACGAGACGCGCTGCCGCGAACTGATGGAGAACTCCATCGGTCTGATCACCGCGCTCAACCCCTACATCGGCTACGAGAACGCCACCCGCATCGCCAAGGTCGCCCTGGAAAGCGGGCGCGGCGTACTGGAGCTGGTGCGCGAGGAGCAGCTGCTGGACGAGGCCACCCTGGCCGACATCCTGCGCCCCGAGAACATGATCGCCCCGCGTCTGGTTCCGCTGCAGGGCTGA MSSAASVRVEKDLLGTLEVPADAYYGIQTLRAVQNFRLSGVPLSHYPKLVIGLAMVKQASADANRELGHLSAAKHTAISTACARIIQGEFHEQFVVDMIQGGAGTSTNMNANEVIANIALEAMGHEKGQYQHLHPNNDVNMAQSTNDAYPTAIRLGLLLGHDSLLSALDKLIQSFAAKGLEFGHVLKMGRTQLQDAVPMTLGQEFRAFATTLGEDLQHLKLLAPTLLTEVNLGGTAIGTGINADPKYQALAVKRLAIISGHPLTPAADLIEATSDMGAFVLFSGMLKRTAVKLSKICNDLRLLSSGPRTGINEINLPARQPGSSIMPGKVNPVIPEAVNQVAFEVIGNDLALTMAAEGGQLQLNVMEPLIAYKIFDSIRLLTRAMDMLRELCIDGITANETRCRELMENSIGLITALNPYIGYENATRIAKVALESGRGVLELVREEQLLDEATLADILRPENMIAPRLVPLQG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0129 CDS 130216 131469 + sodium:dicarboxylate symporter YP_001185635.1 146305170 5106809 PFAM: sodium:dicarboxylate symporter Cytoplasmic Membrane[Class 3] PF00375|SDF, Sodium:dicarboxylate symporter family|17|399|2e-87 COG1301|GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]. ATGAGTCAGAGCAATACCGCTTCCCTTTCCCTGCTTGCGCGCGTGCCGCTGTGGCAGCAGATCCTCGTCGGCCTGGTGCTCGGCGTGGTGGTCGGCATGCTGTCCAAGAGCCTCGCCCTGGCGCTGGCGCCGGTCGGCGCGCTGTTCCTCAATGCGATCAAGATGCTCATCGTGCCGCTGGTGTTCGTCTCCCTGGTGGCGGGCATCACCGCCATGAGCGACAGCGCCAAGCTCGGCCGCATCAGCGTCAAGACCATCGCCATCTACCTGATCACCACCGCCTTCGCGGTGAGCATCGGCCTGGCCTTCGGCACCCTGTTCAGCCCCGGTGAGGGCATGAACATGGTCGCCAGCGGCAGCGAAGAGGCCAAGCAGGCGCCCTCGCTGGTGCAGATCCTGGTGGGGCTGGTGCCGACCAATCCGGTGACCGCCTTCGCCGAAGGCAACATCCTGCAGATCATCGTCTTCGCCATCGCCCTGGGCGTGAGCATGAACCTGATCGGCGAGAAGGCCGCGCCGGTGGCCAAGCTGTTCGACAGCCTGGCCGAGGTGTTCTACAAGCTCACCGACCTGGTGATGCGCTTCGCCCCCATCGGCGTGTTCGCGCTGATCGCCGGCGTGGTCGCTTCCCACGGCATCGAGGTATTGCTGCCGCTGGCCGGGGTGATCGGGGTGATCTACCTGGCCAGCATCGCCCACATGCTGCTGATCTACGGCGGCCTGATCGGCGGTCTGGCGCGCCTCAGCCCGCTGCGTTTCTTCCGCGGCATCGCCCCGGCGCTGGCAGTGGCCTTCAGTACCTCGAGCAGCTCCGGCACCCTGCCGGTGTCCATCGAGTGCGCGCGCAAGAACCTCGGCGTATCGCAGGGCGTGGCCGGCTTCGTGCTGCCGGTGGGCGCCACCATCAACATGGACGGCACCGCCATCTACCAGGGCGTGCTGGCGCTGTTCATCGCCCAGGCCTTCGGCATCGACCTGAATGCCGGCCAGTACCTGATGATCATCCTCACCGCCACCCTGGCTTCGGTCGGCACCGCCGGCGTACCCGGCGCCGGCCTGATCATGCTCGGCCTGGTGCTGACCTCGGTCGGCCTGCCGCTGGAAGGCGTGGCGCTGATCGCCGGTATCGACCGCATCCTCGACATGGCGCGCACCACGGTGAACGTCGCCGGTGACCTGATGACCACCACCCTGGTGGGCAGCAGCGAGAAGGAGCTGGATCGCGAGATCTACAACAGCGACAACGCTGCCTGA MSQSNTASLSLLARVPLWQQILVGLVLGVVVGMLSKSLALALAPVGALFLNAIKMLIVPLVFVSLVAGITAMSDSAKLGRISVKTIAIYLITTAFAVSIGLAFGTLFSPGEGMNMVASGSEEAKQAPSLVQILVGLVPTNPVTAFAEGNILQIIVFAIALGVSMNLIGEKAAPVAKLFDSLAEVFYKLTDLVMRFAPIGVFALIAGVVASHGIEVLLPLAGVIGVIYLASIAHMLLIYGGLIGGLARLSPLRFFRGIAPALAVAFSTSSSSGTLPVSIECARKNLGVSQGVAGFVLPVGATINMDGTAIYQGVLALFIAQAFGIDLNAGQYLMIILTATLASVGTAGVPGAGLIMLGLVLTSVGLPLEGVALIAGIDRILDMARTTVNVAGDLMTTTLVGSSEKELDREIYNSDNAA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0130 CDS 131600 133072 - GntR family transcriptional regulator YP_001185636.1 146305171 5106810 PFAM: regulatory protein GntR, HTH ; PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II Cytoplasmic[Class 3] biological_process|GO:0009236|cobalamin biosynthetic process|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0048472|threonine-phosphate decarboxylase activity|IEA TIGR01140|L_thr_O3P_dcar|threonine-phosphate decarboxylase|equivalog|6.6e-05|4.1.1.81|Biosynthesis of cofactors, prosthetic groups, and carriers|Heme, porphyrin, and cobalamin PF00155|Aminotran_1_2, Aminotransferase class I and II|159|400|5e-21 ; PF00392|GntR, Bacterial regulatory proteins, gntR family|22|85|2e-13 COG1167|ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]. ATGAGACGCTCGCCCGCCTTGCCATTCGACCTTTCCGGCATTCATCTGCAGCCCGGCCAAGGGCTGGCGCGCCAGCTCTACCAGGCCTTGCGCGAGCGCATCCTCGACGGTCGCCTGGCCGGTGGCACACGCCTGCCGGCCAGCCGTGAGCTGGCCGCGCTGCTTGGTATCTCGCGCAATACCGTGACCCGCGCGCTGGACCAGCTGTATGCCGAGGGCTACGTGAACGGGCGGGTCGGCGATGGCACCTACGTCGCCGAGCTGACACGCCACCGGCCTGCCCCGGTGCCGGTGGCAGCCGTCGCCCCGACAGCGGCCAGCCCGGCAATGCAGCTGTTGCACAACCATCACCTGGCGATGCCCGCCGCGGGCGCACCGCGCGCCTTTCGCATCGGCGTGCCGGCTTTCGACCTGTTCCCCTTCGAGACCTGGTCACGCCTGCAGGTGCGCTTCTGGCGCAAACCCTCGCTGGCACGGCTGGGCTATGGCGACCCTGCCGGTGACCTGCAGCTGCGCGAGCTGATCGCCGCCTACCTGCGCAACAGCCGCGGCCTGACCTGCGAGGCGCCGCAGGTACTGATCACCTGCGGCTCGCAGCAGGCCATCAGCCTCTGCGCGCAGTTGCTGATTCAACCGGGCGAGCGCGTGGCCATCGAAAACCCCGGCTACCGCGCGGCGGGCCATGCCTTCGCGGTGGCCGGCGCGCAGCTGTGCGGCGTGGCGGTAGACGGCGATGGCCTGGACGTCGACGCCCTGCAGCGTCTGAACGAGTGCCGGCTGGCCTATGTCACGCCCGCGCATCAATACCCCACCGGCGTCACCCTGTCGCTGCCCAGGCGCCTGGCCTTGCTGGAGTGGGCCAAGCGCGTCAACGGCTGGATCATCGAGGACGATTACGACGGCGAGTACCGCTACAGCGGTACGCCACTCGCGCCACTGGCAGCGCTGGATGAGCAGCAGCGGGTGATCTACATCGGCACCTTCGGCAAGCTCGCCTTCCCGGCGCTGCGCCTGGGGTATCTGGTGCTGCCGCCGGCGCTGGCCGAGAGCTTCGCGAGGCGCCAGGCGCTGGAGATACGCCACTCGGAGGTCGGCACCCAGGCGGTGATGGCCGAGTTCATCGCCGCCGGGCACTTCCAGCGCCATGTGCGGCGCATGCGTCAGGCTGCGCGCAGCCGCCGCGACGCCCTGATCGAGGCCTGGCCGCAGGCGATTCCCGGATGCTCACCGTTGCCGGCGGTTGAGGCCGGCCTGCACCTGAGCATCAGGGTCGAGAGCCTGGCCCGTGAGCGTGAGCTGATCGGCTCCGCACGCGCAGCCGGTATCGAGATGAACCCCTTGAGCGGTTACTGGCTACCCGGCAGCGATACGGCTGAAGACGCCCGCGCCGGGCTGGTGCTGGGCTTTGCGGCAGTGCCCGAGGCGCAGATCGTCGAGGCGGTGCAGACGCTACGCCGGGCTTGGAAGCTGTAA MRRSPALPFDLSGIHLQPGQGLARQLYQALRERILDGRLAGGTRLPASRELAALLGISRNTVTRALDQLYAEGYVNGRVGDGTYVAELTRHRPAPVPVAAVAPTAASPAMQLLHNHHLAMPAAGAPRAFRIGVPAFDLFPFETWSRLQVRFWRKPSLARLGYGDPAGDLQLRELIAAYLRNSRGLTCEAPQVLITCGSQQAISLCAQLLIQPGERVAIENPGYRAAGHAFAVAGAQLCGVAVDGDGLDVDALQRLNECRLAYVTPAHQYPTGVTLSLPRRLALLEWAKRVNGWIIEDDYDGEYRYSGTPLAPLAALDEQQRVIYIGTFGKLAFPALRLGYLVLPPALAESFARRQALEIRHSEVGTQAVMAEFIAAGHFQRHVRRMRQAARSRRDALIEAWPQAIPGCSPLPAVEAGLHLSIRVESLARERELIGSARAAGIEMNPLSGYWLPGSDTAEDARAGLVLGFAAVPEAQIVEAVQTLRRAWKL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0131 CDS 133170 133802 + FMN-binding negative transcriptional regulator YP_001185637.1 146305172 5106811 PFAM: Negative transcriptional regulator Cytoplasmic[Class 3] PF04299|FMN_bind_2, Putative FMN-binding domain|2|169|4e-69 COG2808|PaiB, Transcriptional regulator [Transcription]. ATGTATTGCCCCGCCGCCTTTCGCCAGGACGATCTGCCCACCCTGCACGCGCAGATCCACGCCAGCGGCCTGGCCATCGTGACCAGCAGCGGTGCGCAGGGCCTGCAGGCCAGCCATCTGCCGTTGCTGCTCGAGCCTGGCGAAGGCGAGTTCGGCACCCTGTACGGCCACTTCGCCCGCGCCAATGGGCACTGGCGCGACCTGGCCGCCGGCGCCGAGGCGCTGGTGGTGTTCAGCGGTGCGGACGCCTACGTGCATCCCGGCTGGTATGCGGCCAAGGCCGAGCACGGCAAGGTGGTGCCGACCTGGAATTACATCGCCGTGCATGCCTGGGGCCAGGCCGAGGTGTTCGACGAGCCCGAGCGCCTGCTCGAACTGGTCAGCCGCCTCAGCGAGCGCCACGAACAAGGGCGCCCGCAGCCCTGGGCGGTCAGCGATGCGCCGCGCGACTACATCGACAGCATGCTGCGCGCCATCGTCGGCTTCGCCCTGCCGATTCGTCGGCTCGAAGGCAAATGGAAGCTCAGCCAGAACCGTTCGAGCAACGACCAGGCCGGTGTCCGTGCGGGTCTTGCCACGTCCGCCAGCCCGCGCGATCAGGAACTGGCGGCGCAGATGAATCCCACCGACTGA MYCPAAFRQDDLPTLHAQIHASGLAIVTSSGAQGLQASHLPLLLEPGEGEFGTLYGHFARANGHWRDLAAGAEALVVFSGADAYVHPGWYAAKAEHGKVVPTWNYIAVHAWGQAEVFDEPERLLELVSRLSERHEQGRPQPWAVSDAPRDYIDSMLRAIVGFALPIRRLEGKWKLSQNRSSNDQAGVRAGLATSASPRDQELAAQMNPTD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0132 CDS 133822 134262 + GCN5-related N-acetyltransferase YP_001185638.1 146305173 5106812 PFAM: GCN5-related N-acetyltransferase Cytoplasmic[Class 3] PF00583|Acetyltransf_1, Acetyltransferase (GNAT) family|54|134|5e-10 COG0456|RimI, Acetyltransferases [General function prediction only]. ATGCTCGATATCCGTCCCATCACCGCTGCCGATCACGCCGTCTGGCTGCCGCTCTGGCAGGCTTACCAGCGCTTCTACCAGGCCGAAATTCCAGCCGAGACCAGCGCCCTCACCTGGCGGCGCTTTCTCGACCCGGCCGAGCCGATGCACGCCGCCTTGGCCTGGCAGGACGGCGAGGCGGTCGGCCTGGTGCACTTCATCTACCACCGCAGTTGCTGGACGAGTGGTGACTACTGCTACCTGCAGGATCTGTTCGTCGCCGAGCACATTCGCGGCGGCGGCATCGGTCGCGCGCTGATCGAGCATATTTACGCCGAAGCACGCGCCGCCGGCGCCAGCCGCGTACATTGGCTGACCCAGGAAAGCAACTACCAGGGGCGTATGCTCTACGACCGCATCGGCGACCGCTCCGGGTTCATCCAGTACAGGAAGCTCTTCTGA MLDIRPITAADHAVWLPLWQAYQRFYQAEIPAETSALTWRRFLDPAEPMHAALAWQDGEAVGLVHFIYHRSCWTSGDYCYLQDLFVAEHIRGGGIGRALIEHIYAEARAAGASRVHWLTQESNYQGRMLYDRIGDRSGFIQYRKLF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0133 CDS 134262 134933 + GCN5-related N-acetyltransferase YP_001185639.1 146305174 5106813 PFAM: GCN5-related N-acetyltransferase Cytoplasmic[Class 3] COG1670|RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]. ATGACGCGTGATCTCGCTCACTGGCAACCCCGTCCGACACCGGACCAGCGCGTGCTGCAGGGCCGTTTCGTGCGTCTCGAAGCACTCGATGTCACGCGGCATGGTGAGGATCTGTGGCGCGCGCTGCAGGGGCCGGACCCGGCGCTTTGGGATTATCTGCCCTACGGCCCGTTCATCGAGCGAGGCGTCTTCGATACCTGGCTGGCCGGCAATGCGCAGAGCCGTGACCCGCTGTTCTATGCGGTGGTCGACCTGGCCAGCGGCCGCGCCCTGGGACTGTTCAGCTACCTGCGTATCACCGCGCAGGACGGCAGCATCGAAATCGGCCACGTCGCCTTCGGCGCGCCGATGCAGCGCACCCCGGGCGCGACCGAGGCGGTCTATCTGCTGGCGCGCCATGCCTTCGACGATCTCGGCTATCGCCGCCTGGAATGGAAGTGCGACGCGGCCAATGCCCGCTCGCTGCGCGCCGCCGAGCGCTTCGGCTTCATCCGGGAAGGGTTGTTCCGTCAGCACATGGTGCGCAAGGGCCGCAACCGTGACACCGCCTGGTTCTCCATCATCGACGGCGAATGGCCGGCATGCCGCGAGGCCTTCGCGCGCTGGCTGGCGGCGGACAACTTCGATGAGGCGGGGCGGCAGAAGCAGCGCCTGGAGGCGTTGCGGGGGTAA MTRDLAHWQPRPTPDQRVLQGRFVRLEALDVTRHGEDLWRALQGPDPALWDYLPYGPFIERGVFDTWLAGNAQSRDPLFYAVVDLASGRALGLFSYLRITAQDGSIEIGHVAFGAPMQRTPGATEAVYLLARHAFDDLGYRRLEWKCDAANARSLRAAERFGFIREGLFRQHMVRKGRNRDTAWFSIIDGEWPACREAFARWLAADNFDEAGRQKQRLEALRG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0134 CDS 134938 135756 - helix-turn-helix domain-containing protein YP_001185640.1 146305175 5106814 PFAM: helix-turn-helix domain protein Cytoplasmic[Class 3] ATGTCCGATTCCCTCGGCAGCAACCTCAAACTGCTGTGCAGCCATTACCGCTCCATCGCCGAGGTCTGCCGCAAGCTCTCGATCAACCGCGCGCAGTTCAATCGCTACCTGGCCGGGCAGAGCCGACCCACCGCGCACAACCTCAAACGCATCTGCGACTTCTTCGGCGTCGAACCCTTCGAACTGAGCATGCCGGCCGAGCAGTTCGCCCGCCTGATCGGCGCCCGCAGCGGCGATACGCAGGTGCACGGCGGCAGCGATCCGCTGCTGGAGCTGTTCGACCCGCTGCGCCAGCAGGCCAGCCCCATGGGGCGCTACTGCGGCTACTACTTCGAGTACTCCAACTGCATGTCGGTTCCGGGCCACGTCCTGCTGTCGCTGGTACACCTGCGCGAGGAGCGCGGCAACTACCTGTTCGAGCGTCAGGAACGCCAGGAGCGCCAGGAACACACCCGCGGCGGCGCCGAGGACTGGGTGCGCTGCCGCTATCTGGGCGCGGCCTTCTTCCTGCAGGACCGCCTGTTTCTGGTGGACTACGAGTCGCTGACCGGCAACGAGATCAGCCAGACCATCCTCATCCCCAGCTTCAAGAGCCGCATCACCCGTCTCAACGGCATCAAGACCGGCGTCTCCAGCGGCGACCGGCGCACGCCGGCCTGCACCCGCGTGGTCTGGCAGTACCTGGGCAACGAGATCAACCGGGTCAACGCCTACCGCCAGCTGATGCTCTACGCGCCGGACGACGCGCGCATCGACGACGACATCCGCCAGCGCCTGGGCGGCGCGCAGCTGCGTGATGGGTTGTTCGAGATGGAGTAG MSDSLGSNLKLLCSHYRSIAEVCRKLSINRAQFNRYLAGQSRPTAHNLKRICDFFGVEPFELSMPAEQFARLIGARSGDTQVHGGSDPLLELFDPLRQQASPMGRYCGYYFEYSNCMSVPGHVLLSLVHLREERGNYLFERQERQERQEHTRGGAEDWVRCRYLGAAFFLQDRLFLVDYESLTGNEISQTILIPSFKSRITRLNGIKTGVSSGDRRTPACTRVVWQYLGNEINRVNAYRQLMLYAPDDARIDDDIRQRLGGAQLRDGLFEME Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0135 CDS 135917 137359 + amino acid carrier protein YP_001185641.1 146305176 5106815 TIGRFAM: amino acid carrier proteinPFAM: sodium:alanine symporter ; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter Cytoplasmic Membrane[Class 3] biological_process|GO:0006865|amino acid transport|IEA ; cellular_component|GO:0016020|membrane|IEA ; molecular_function|GO:0005416|cation:amino acid symporter activity|IEA TIGR00835|agcS|amino acid carrier protein|subfamily|2.9e-195||No Data|No Data PF01235|Na_Ala_symp, Sodium:alanine symporter family|51|449|1e-123 COG1115|AlsT, Na+/alanine symporter [Amino acid transport and metabolism]. ATGCTCGATCTTCTCAATGACCTCATCTGGAGCAAGCTGCTGATCGTGATGCTGATCGGTCTCGGTCTGTACTTCAGCATCGCCTCGCGCTTCGTGCAGTTCCGCTATTTCGGCAACATGTTCCGCATCTTCCGCGAAGCCTTCCAGCGTCAGCCCGGTCAGCTCAGCTCGTTCCAGGCCCTGATGCTGTCGGTGGCTGGCCGCGTCGGTGCCGGCAACATCGCCGGTGTATCGGTGGCCATCATGCTCGGTGGCCCGGGCGCGATCTTCTGGATGTGGGTGGTGGCGCTGGTCGGCATGGCCACCAGCTACTTCGAGTGCTCCCTGGCGCAGCTGTACAAGCGCCGCGAGGCCGACGGCGGCTACCGCGGCGGCCCGGCGTTCTACATTCAGCACGGCCTCGGTCAGCGCTGGCTGGGCATCCTCGTGTCGATCCTGCTGCTGGTGACCTTCGGCTTCGGCTTCAACGCCGTGCAGTCCTTCACCGTGGCCAGCTCGTTGCACGACACCTTCGGCATCCCGACCCTGGTCAGCGGCATCGCTCTGACCGTGGTGATCGGCCTGATCATCTTCGGCGGCATCAAGCGCATCGCCCAGTTCGCCGACGTGCTGGTACCGGTCATGGCCTTCTCCTACATCGGCATGGCCGTGCTGGTGATCGGCATGAACATCAGCGAAGTGCCGGCCACCTTCGCCCTGATCGTCAAGAGCGCCTTCGGCCTCGAGCCGGCCTTCGCCGGCGGCATCGGTGCGGCCATCATCATGGGGGTCAAGCGCGGCCTGTTCTCCAACGAGGCCGGCCTGGGCAGCGCGCCCAACGTGGCCGCCGTCGCCGAGGTCAAGCACCCGGTCGCGCAGGGCATCGTGCAGTCGCTCAGCGTATTCATCGATACCCTCATCCTATGCAGCTGCACCGCGCTGATCATCCTGCTGTCCGGCGTCTATCAGCCGGGCATGGAACAGGCCGGTGTGGTCCTGACCCAGAGCGCCGTGGCCGCCGTGGTCGGTGAGTGGGGCCGGGTGTTCATCAGCCTGGCGCTGCTGCTGTTCGTCTTCACCACCCTGATCTACAACTACTACCTCGGCGAGAACGCCCTGGGCTTCTTCAGCCAGAAGCGCGGCCCGGTGATGATCTACCGCGTGCTGGTGGTCGGTCTGGTGCTGTGGGGTTCGGTGCAGGATCTGGGCACCGTGTTCGCCTTCGCCGACGTGACCATGGGCCTGCTGGCCATCGCCAACCTCATCGCCCTGGCGCTGCTGTTCAAAGTGGGCCTGCGCCTGATGCGCGACTACGATAGCCAGATCAAGGCCGGCGTGGACTCGCCGGTGTTCGACGCCAAGCAGTTCGCCGATCTGGACCTCGACCCCAGCGTCTGGGGCGCCCAGGCGAGCAAGCCGGTGGCGGATCAGGCCGAGATCGGCGACCGCGTGCACCAGCGTTGA MLDLLNDLIWSKLLIVMLIGLGLYFSIASRFVQFRYFGNMFRIFREAFQRQPGQLSSFQALMLSVAGRVGAGNIAGVSVAIMLGGPGAIFWMWVVALVGMATSYFECSLAQLYKRREADGGYRGGPAFYIQHGLGQRWLGILVSILLLVTFGFGFNAVQSFTVASSLHDTFGIPTLVSGIALTVVIGLIIFGGIKRIAQFADVLVPVMAFSYIGMAVLVIGMNISEVPATFALIVKSAFGLEPAFAGGIGAAIIMGVKRGLFSNEAGLGSAPNVAAVAEVKHPVAQGIVQSLSVFIDTLILCSCTALIILLSGVYQPGMEQAGVVLTQSAVAAVVGEWGRVFISLALLLFVFTTLIYNYYLGENALGFFSQKRGPVMIYRVLVVGLVLWGSVQDLGTVFAFADVTMGLLAIANLIALALLFKVGLRLMRDYDSQIKAGVDSPVFDAKQFADLDLDPSVWGAQASKPVADQAEIGDRVHQR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0136 CDS 137521 138510 + Asparaginase YP_001185642.1 146305177 5106816 PFAM: Asparaginase/glutaminase Alanine, aspartate and glutamate metabolism [KEGG] ; Cyanoamino acid metabolism [KEGG] ; Nitrogen metabolism [KEGG] ; Metabolic pathways [KEGG] 3.5.1.1 Cytoplasmic[Class 3] TIGR00519|asnASE_I|L-asparaginases, type I|subfamily|1.3e-43|3.5.1.1|No Data|No Data PF00710|Asparaginase, Asparaginase|6|314|9e-80 COG0252|AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]. ATGGCGACCCCAGAAAACCTGCTGGTGCTTTACACCGGCGGGACCATTGGCATGCAGATGAGCGCGGACGGCCTGGCTCCGGCTTCCGGCTTCGAGGCGCGCATGCGTGCCCAGCAGGCCAGCGAGAATACCGGCGAGCTGCCGAACTGGCAGTTCCGCGAGCTGCTGCCGCTGATCGACAGCGCCAACATGAACCCCGGCCACTGGCTGGCCCTACGCGACCAGATCGTCGCCGCGGTCGAGCAGGAGGGGCACGACGCCGTACTGGTGCTGCATGGCACCGATACCCTGGCCTACAGCGCCGCGGCGCTGAGCTTCCTGCTGCTCGGCCTGGACGTGCCGGTGCTGCTCACCGGCGCCATGCAGCCGGCCGGCGTGGCGGGCGGCGATGCCTGGCCCAATCTGTTCGGCGCGTTGCGCGCATTGCACCGCGGCGTGCAGCCGGGCGTGCACCTGTACTTCAACGGCCAGCTGCTGCATGGCGTGCGCTGCTCCAAGCTGCGCAGCGATGCCTTCGACGCCTTCCAGGTGCTGCCGCGCCTGCGCCAGGCCGAGCGCGCCGCCATCGATGCGCGCATCGACTATCGCCAGCCGCGGCAGGCGGCGAACCTGGCGGTGCTGCCGCTGCATCCGGCGCTGCAGGCGTCGCACCTGCGCGCCCTGCTGGAAAGCGGCATACAGGGCTTGCTGCTGGAATGCTACGGCAGCGGCACCGGCCCGGCCGGCGATGCCGAGCTGATGGCCGTCCTGCACGAGGCGCACGCGCGCGGCGTGGTGCTGGCGGCGATCAGCCAGTGCCCGCAGGGGCACGTGCAGTTCGGCGTGTACGCCGCCGGCAGCCGACTGGCCGAGGCCGGACTGGTGTCCTGCGGCGGCATGACCCGCGAGGCGGCGCTGGGCAAGCTGTTCGCCCTGCTCGGCGCCGGGTTGACGCAGGCCGAGGTCGAACACTGGCTGGCGCGCGATCTCTGTGGTGAGATGAGCGACTGA MATPENLLVLYTGGTIGMQMSADGLAPASGFEARMRAQQASENTGELPNWQFRELLPLIDSANMNPGHWLALRDQIVAAVEQEGHDAVLVLHGTDTLAYSAAALSFLLLGLDVPVLLTGAMQPAGVAGGDAWPNLFGALRALHRGVQPGVHLYFNGQLLHGVRCSKLRSDAFDAFQVLPRLRQAERAAIDARIDYRQPRQAANLAVLPLHPALQASHLRALLESGIQGLLLECYGSGTGPAGDAELMAVLHEAHARGVVLAAISQCPQGHVQFGVYAAGSRLAEAGLVSCGGMTREAALGKLFALLGAGLTQAEVEHWLARDLCGEMSD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0137 CDS 138539 138982 + GCN5-related N-acetyltransferase YP_001185643.1 146305178 5106817 PFAM: GCN5-related N-acetyltransferase Cytoplasmic[Class 3] PF00583|Acetyltransf_1, Acetyltransferase (GNAT) family|55|135|2e-12 COG0456|RimI, Acetyltransferases [General function prediction only]. ATGAGTCTCGAGATCCGTCCCGTCAGTGCCGCCGATCACGAGGCCTGGCTGCCGCTGTGGCAGGGCTACCAGCGCTTCTACATGACCGACATCCCGGCCGAGGCCAGCGCCGTGACCTGGCAGCGCTTTCTCGACCCGGCCGAGCCCATGGGCGCTGCCCTGGCCTGGCAGGATGGCGAGGCGGTCGGCCTGGTGCACTGGGTCATCCATCGCTCGACCTGGACGGTCGGCGACTACTGCTACCTGCAGGACCTGTTCGTCGCCAAGGGCCAGCGCAGCAGTGGCGTCGGCCGCCAGTTGATCCAGCACGTCTATGACCAGGCGCGCGAAGCCGGCTGCTCGCGGGTCCACTGGCTGACTCATGAGAGCAACAGCCAGGCCATGCTGCTCTACGAGCGCATCGGCGAGCGCTCGGGCTTCGTGCAGTACCGCAAGCTGCTCTAG MSLEIRPVSAADHEAWLPLWQGYQRFYMTDIPAEASAVTWQRFLDPAEPMGAALAWQDGEAVGLVHWVIHRSTWTVGDYCYLQDLFVAKGQRSSGVGRQLIQHVYDQAREAGCSRVHWLTHESNSQAMLLYERIGERSGFVQYRKLL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0138 CDS 138990 139385 - Endoribonuclease L-PSP YP_001185644.1 146305179 5106818 PFAM: Endoribonuclease L-PSP Cytoplasmic[Class 3] biological_process|GO:0006402|mRNA catabolic process|IEA ; molecular_function|GO:0004521|endoribonuclease activity|IEA TIGR00004|TIGR00004|endoribonuclease L-PSP, putative|hypoth_equivalog|1.1e-22||Transcription|Degradation of RNA PF01042|Ribonuc_L-PSP, Endoribonuclease L-PSP|9|128|1e-27 COG0251|TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis]. ATGTCGATGCCCGAATACCATATGTTCGCCACCGCGCCCGCACCGGTCGCACCGTTTTCTCACGCCTGCGAAGCCGATGGCTGGGTGTTCATCACCGGCCAGCTGCCCATCGATCCGGGCAATGAAGCGGCGCCCCTGCCCGAGGGCATCGAGGCGCAGACGCACAAGACGTTCGACAACCTGCTGGTGGTGCTCGAGGGGCTCGGCCTGGGGCTGGAGAACGTGGTCTCGGCGCGCGCCTTCCTCACCGATTTCTATGGCGACTACGCGCGCTTCAATGTGGTGTACGCCAGCTACTTCCCCGAAGACAAACGCCCGGCGCGCACCTGCATCGGCACCACGGGCCTGGCGCGGCATGCGCTGGTGGAGATCGACTTCATCGCCAGGCGGCCGTGA MSMPEYHMFATAPAPVAPFSHACEADGWVFITGQLPIDPGNEAAPLPEGIEAQTHKTFDNLLVVLEGLGLGLENVVSARAFLTDFYGDYARFNVVYASYFPEDKRPARTCIGTTGLARHALVEIDFIARRP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0139 CDS 139457 140365 - Glutaminase YP_001185645.1 146305180 5106819 PFAM: glutaminase ; catalyzes the formation of glutamate from glutamine Alanine, aspartate and glutamate metabolism [KEGG] ; Arginine and proline metabolism [KEGG] ; D-Glutamine and D-glutamate metabolism [KEGG] ; Nitrogen metabolism [KEGG] ; Metabolic pathways [KEGG] 3.5.1.2 Cytoplasmic[Class 3] PF04960|Glutaminase, Glutaminase|19|302|1e-128 COG2066|GlsA, Glutaminase [Amino acid transport and metabolism]. ATGCAAGCGCTGTTGACTGAAATCCTCGACGAGGTCCGCCCGCTGATCGGCCAGGGCAAGGTGGCCGACTACATTCCCGCGCTGGCCGGCGTGGTGCCCGATCAGCTGGGCATCGCCGTGTACGGCAACGATGGCCAGTTGCACGTGGCCGGCGATGCGCGCACGCCGTTTTCGATCCAGAGCATTTCCAAGGTGTTCAGCCTGGTACAGGCCATCGGCCACAGTGGCGAGGCCATCTGGCAGCGCCTCGGCCACGAGCCGTCCGGGCAGCCGTTCAATTCGCTGGTGCAGCTGGAATTCGAGCGTGGCAAACCGCGCAACCCGTTCATCAACGCCGGCGCCCTGGTCATCTGCGACATCAACCAGTCGCGCTATGCCGCACCGGCACTGTCGATGCGCGACTTCGTCCGGCGCCTGTCGGGCAACCCCGAGGTGACGGTGGACAACCACGTCGCCGAATCGGAATACCAGCACCGTGCGCGCAACGCCGCGGCGGCCTACCTGATGCAGTCGTTCGGCAATTTCCACAACGAGGTGGAGGCGGTGCTGCGCAGCTACTTCAGCTGCTGCGCGCTGCGCATGAGCTGCGTGGACCTGGCGCGTGCCTTCGGCTTTCTGGCCAACCAGGGTTTCTGCCAGCACAGCGGCGAGCAGATTCTCTCGCCGCGACAGAGCAAGCAAATCAACGCCATCATGGCCACCAGTGGGCTGTACGACGAAGCGGGCAACTTCGCCTACCGCGTCGGCCTGCCCGGCAAGAGCGGCGTCGGTGGCGGCATCGTCGCGGTGGTGCCGGGGCAGTTCAGCGTGTGCGTGTGGTCGCCGGAACTCAATGCAGCCGGTAATTCCCTGACCGGGATCAAGGCACTGGAACTGCTCAGCGAACGCATCGGCTGGTCGGTGTTCTGA MQALLTEILDEVRPLIGQGKVADYIPALAGVVPDQLGIAVYGNDGQLHVAGDARTPFSIQSISKVFSLVQAIGHSGEAIWQRLGHEPSGQPFNSLVQLEFERGKPRNPFINAGALVICDINQSRYAAPALSMRDFVRRLSGNPEVTVDNHVAESEYQHRARNAAAAYLMQSFGNFHNEVEAVLRSYFSCCALRMSCVDLARAFGFLANQGFCQHSGEQILSPRQSKQINAIMATSGLYDEAGNFAYRVGLPGKSGVGGGIVAVVPGQFSVCVWSPELNAAGNSLTGIKALELLSERIGWSVF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0140 CDS 140508 141437 + Auxin Efflux Carrier YP_001185646.1 146305181 5106820 PFAM: Auxin Efflux Carrier Cytoplasmic Membrane[Class 3] TIGR00946|2a69|Auxin Efflux Carrier|subfamily|1.1e-09||Transport and binding proteins|Other PF03547|Mem_trans, Membrane transport protein|3|304|7e-25 COG0679|COG0679, Predicted permeases [General function prediction only]. ATGTCCACCGTTCTCAACGTCCTGTTGCCGATCTTCGGTCTGATTCTGGTCGGCTATATCTGTCGCCGCAGCAATCGCCTGGGACCGACCGCTGCCTCGGAGATGAACCGCTTCGTGGTCTGGCTCGGCCTACCCGCCCTGCTCTTCAGCCTGACGGCCAAGGCTGACTGGGCGCACATCTGGCAGCCCGGTTTCCTGCTGGCGTTCACCGGCGGCACCCTGGCGGTGTTTCTGCTCACCCTGGCCTACCGCTGGAAAACCACCGGCAGCCTGGTCGACGCCAGCATCGACGGACTCAGCGCCGGCTACGCCAACACCGGTTACATCGGCATTCCGCTGTGCGTGCTGGTGCTCGGCGAAGACGGCATGGCGCCGGCCCTGATCGCCTCGCTGATCGTCGTCTGCCTGCTGTTCGCCCTGGCGGTGGTGTGCATCGAGGTGGGGCTGCAGAGCCAGAAGGGCCTGGGCGGAGCGATTGCCCAGGTCAGCCTGGCGCTGCTGAAGAACCCGCTGGTGGTGGCGCCGGTGCTCGGCGCGCTCTGGTCGTTCGGCGGCCTGTCACTCGCGCCGGCGCTGGACGAGTTCCTGCGCCTGCTCGGCGCGGCGACCGTGCCCTGCGCGCTGGTGTCGCTGGGCCTGTTCCTGGCGCAGCGGCAGAGCGGTCCGGCCAAGGGCGCCTGGCCGCTGGTGGCGCTCAAGCTGGCGCTGCAGCCACTGGTGACCTGGTTCATCGCCTTCGTGCTGCTCGACCTGCCGCCGTTCTGGGCTCACGCTGCCTTGCTGCTCAGTGCGCTGCCCACCGGCACCGGCCCCTTCATGCTGGCCGAGTATTACCAGCGCCAGGCCGCGCTGGTGTCGCGGGCCATTCTGTTCTCGACCCTCGGCTCGCTGCTGACCCTGTCGCTGATCCTGCTGCTGATCACGCCTTGA MSTVLNVLLPIFGLILVGYICRRSNRLGPTAASEMNRFVVWLGLPALLFSLTAKADWAHIWQPGFLLAFTGGTLAVFLLTLAYRWKTTGSLVDASIDGLSAGYANTGYIGIPLCVLVLGEDGMAPALIASLIVVCLLFALAVVCIEVGLQSQKGLGGAIAQVSLALLKNPLVVAPVLGALWSFGGLSLAPALDEFLRLLGAATVPCALVSLGLFLAQRQSGPAKGAWPLVALKLALQPLVTWFIAFVLLDLPPFWAHAALLLSALPTGTGPFMLAEYYQRQAALVSRAILFSTLGSLLTLSLILLLITP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0141 CDS 141427 142068 - hypothetical protein YP_001185647.1 146305182 5106821 Cytoplasmic[Class 3] ATGAACACCGCCGCCGTCCGCCAGTCCATCGCCCAGGCACAACAACACGAAGTCAGCAGCCAGGCCCTCGCCCGGTTTCTGCAGGCCCAGCTCGAACGCCTGCACCCGTCCATTCGCCTGCCCGAGGAGGACGCGTCGGGCGCCCTGAGCGCGTTCGTCAGCGCCTATATCGAACAGGTGCCCGAGGTGCTCGACGCCGCGGTGGAAGTCGCGCGGGAGGCCGGTATCGAGGATGCGGTCAAGCCCGTGCTGAAGATTGCCGAGCATTTCTTCCTCCAGCCGCCGCCGCTGATCGATGGCCATGAGGGGCTCGAAGGGCTGCTCGACGAGGCCTACCTGGCGCACCGCCTGGTGGAGGAGGTCAACGACCGCTACATCACCCACCTGGGCCAGCCACTGATTCCGCTGGATACCACCCGGGCCAATCTGATCGCCCACCAGCTGATTGGCGAACCCTTCGCCAACCAGCTCGACGAAGCGGTGCATCACGCGCTGGCCGGCATGCTCGACGATGCCAGCTTCGATCAGCCTTCCGTGCAGGCCTACCGCGAACGCCTGGCCGCACCGGATACCGTTTCGGCCTGGCGGCGCTGGCCCTGCCTGTCGCAACAGTTGGGCTTGGAGCTGCAGCTCAAGGCGTGA MNTAAVRQSIAQAQQHEVSSQALARFLQAQLERLHPSIRLPEEDASGALSAFVSAYIEQVPEVLDAAVEVAREAGIEDAVKPVLKIAEHFFLQPPPLIDGHEGLEGLLDEAYLAHRLVEEVNDRYITHLGQPLIPLDTTRANLIAHQLIGEPFANQLDEAVHHALAGMLDDASFDQPSVQAYRERLAAPDTVSAWRRWPCLSQQLGLELQLKA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0142 CDS 142477 143601 + cytochrome c oxidase, subunit II YP_001185648.1 146305183 5106822 PFAM: cytochrome c oxidase, subunit II ; PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region Oxidative phosphorylation [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0055114|oxidation reduction|IEA ; molecular_function|GO:0004129|cytochrome-c oxidase activity|IEA TIGR02866|CoxB|cytochrome c oxidase, subunit II|equivalog|6.8e-59|1.9.3.1|Energy metabolism|Electron transport PF02790|COX2_TM, Cytochrome C oxidase subunit II, transmembrane domain|24|103|5e-05 ; PF00034|Cytochrom_C, Cytochrome c|276|348|9e-07 ; PF00116|COX2, Cytochrome C oxidase subunit II, periplasmic domain|121|241|8e-32 COG1622|CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]. ATGATGCGACATCCACGAGTCTGGATGGGCCTCCTGCTGTGGCTGGCATTAGGCTCGGCGCATGCCCAGTGGACGGTGAACATGGCACCCGGTGTTACCGAGGTCAGCCGCTCCGTCTTCGATCTGCACATGACCATCTTCTGGATCTGCGTCGTGATCGGCGTGATCGTCTTCGGCGCCATGTTCTGGTCGATGATCATGCACCGCCGCTCCACCGGGCAGGAGCCCGCGCACTTCCACGAAAGCACCACGGTGGAAATTCTCTGGACCGTCGTGCCATTGGCCATTCTGGTGCTGATGGCGATACCGGCGACCAAGACGCTGATCGAGATCTACGACACCTCCGAGTCCGAGTTGGATATCCAGGTCACCGGCTACCAGTGGAAATGGCACTACAAGTACCTGGGCCAGGACGTGGAGTTCTTCAGCAACATGTCCACGCCGCGTAGCCAGATCAACAACCGCGAAGCCAAGGGCGAGCACTACCTGTTGGAGGTGGACGAGCCGCTGGTGGTGCCGGTGGGCACCAAGGTGCGCTTTTTGATCACCGCCGCCGACGTGATCCACTCCTGGTGGGTGCCGGCGCTGGCAGTGAAGAAGGACGCCATCCCCGGCTTCATCAACGAGTCCTGGACGCGCATCGAGGAGCCCGGCATCTACCGTGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAAGCCAAGTCCAAGGAGGACTTTGCCGTCTGGCTGGCCGAACGCAAGGAGGCCGCCGCCGCCGAGCGTGAGCTGACCAGCAAGGAATGGACCATGGAAGAGCTGATGGCGCGTGGCGAGAAGGCCTACCTCACCGCCTGCGCCGCCTGCCACCAGCCCGGTGGCGAGGGGCTGCCGCCGATGTTCCCGGCACTCAAGGGTTCGGCCATCGCCATGGGCCCGGCCGAGGGCCATATCGACATCGTCTACAACGGCAAGCCGGGCACCTCCATGGCCGCCTTCGGCAAGCAGCTGTCGCCGGTCGACCTGGCCGCCATCATCACCTACGAGCGCAACGCCTGGGGCAACAAGGTCGGTGACATGGTCACGCCCAAGGACATTCTCGACTTCTCGAAGGCTCAGGAGTAA MMRHPRVWMGLLLWLALGSAHAQWTVNMAPGVTEVSRSVFDLHMTIFWICVVIGVIVFGAMFWSMIMHRRSTGQEPAHFHESTTVEILWTVVPLAILVLMAIPATKTLIEIYDTSESELDIQVTGYQWKWHYKYLGQDVEFFSNMSTPRSQINNREAKGEHYLLEVDEPLVVPVGTKVRFLITAADVIHSWWVPALAVKKDAIPGFINESWTRIEEPGIYRGQCTELCGKDHGFMPVVVEAKSKEDFAVWLAERKEAAAAERELTSKEWTMEELMARGEKAYLTACAACHQPGGEGLPPMFPALKGSAIAMGPAEGHIDIVYNGKPGTSMAAFGKQLSPVDLAAIITYERNAWGNKVGDMVTPKDILDFSKAQE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0143 CDS 143606 145189 + Cytochrome-c oxidase YP_001185649.1 146305184 5106823 PFAM: cytochrome c oxidase, subunit I Oxidative phosphorylation [KEGG] ; Metabolic pathways [KEGG] 1.9.3.1 Cytoplasmic Membrane[Class 3] biological_process|GO:0055114|oxidation reduction|IEA ; molecular_function|GO:0004129|cytochrome-c oxidase activity|IEA TIGR02891|CtaD_CoxA|cytochrome c oxidase, subunit I|equivalog|0|1.9.3.1|Energy metabolism|Electron transport PF00115|COX1, Cytochrome C and Quinol oxidase polypeptide I|22|474|1e-150 COG0843|CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion]. ATGAGTGCAGTGATCGACCACGGTCATACTGACCACCACCATGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCACAAGGACATCGGCACGATGTACCTGTGGTTCAGCTTCTGCATGTTCCTGCTGGGCGGCTCGATGGCCATGGTCATCCGTGCCGAGCTGTTCCAGCCGGGTCTGCAGATCGTGCAGCCGGAATTCTTCAATCAGATGACCACCATGCACGGTCTGATCATGGTCTTCGGCGCGGTGATGCCGGCCTTCGTCGGCCTGGCCAACTGGATGATCCCGCTGATGATCGGCGCGCCGGACATGGCCCTGCCGCGGATGAACAACTTCAGCTTCTGGCTGTTGCCGGCGGCCTTCGGTCTGCTGGTCTCGACGCTGTTCATGGAAGGTGGCGGGCCCAACTTCGGCTGGACCTTCTACGCCCCGCTGTCGACCACCTACGGGCCGGAGAGCACCACCTTCTTCATCTTCGCAGTGCACCTGATGGGCATCAGCTCGATCATGGGGGCGATCAATGTGGTCGCCACCATCCTCAACCTGCGCGCCCCCGGCATGACCCTGATGAAGATGCCGCTGTTCGTCTGGACCTGGCTGATCACCGCCTTCCTGCTCATCGCGGTGATGCCGGTGCTGGCCGGCTGCGTGACCATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAACGCCGCCGGTGGTGGTGATCCGGTCCTGTTCCAGCACGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATCCTGCCCGCCTTCGGTGCGGTCAGCTCGATCATTCCGGCCTTCGCGCGCAAGCCGCTGTTCGGCTACACCTCGATGGTCTATGCCACCGCGGCGATCGCCTTCCTGTCGTTCATCGTCTGGGCGCACCACATGTTCACCGTCGGCATCCCGCTGACCGGCGAGCTGTTCTTCATGTACGCCACCATGCTGATCGCCGTGCCCACCGGGGTGAAGGTATTCAACTGGGCCAGCACCATGTGGCAGGGCTCGATGACCTTCGAGGCGCCGATGCTGTTCTCGGTGGCCTTCGTCATCCTGTTCACCATCGGCGGCTTCTCCGGGCTGATGCTGGCCATCGCCCCGGCGGACTTCCAGTACCACGACACCTACTTCGTGGTGGCGCACTTCCACTACGTGCTGGTGCCCGGGGCGATCTTCGGCATCTTCGCCTCGGCCTACTACTGGCTGCCGAAGTGGACCGGCCACATGTACGACGAAACCCTGGCCAAGCTGCACTTCTGGATGAGCTTCATCGGCATGAACCTGGCGTTCTTCCCCATGCACTTCGTCGGCCTGGCCGGCATGCCGCGGCGCATTCCCGACTACAACATGATGTTTGCCAACTTCAACATGGTGTCGAGCATCGGTGCCTTCCTGTTCGGAGCGACCCAGCTGCTGTTCCTGTTCATCGTCATCAAGTGCATCCGTGGCGGCAAACCGGCCCCGGCCAAGCCCTGGGATGGTGCCGACGGGCTGGAGTGGACGGTGCCTTCGCCGGCGCCCTATCACACCTTCAGCACCCCACCGGAAGTGAAGTAG MSAVIDHGHTDHHHGPAKGLMRWVLTTNHKDIGTMYLWFSFCMFLLGGSMAMVIRAELFQPGLQIVQPEFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFGLLVSTLFMEGGGPNFGWTFYAPLSTTYGPESTTFFIFAVHLMGISSIMGAINVVATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFNAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFARKPLFGYTSMVYATAAIAFLSFIVWAHHMFTVGIPLTGELFFMYATMLIAVPTGVKVFNWASTMWQGSMTFEAPMLFSVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLAKLHFWMSFIGMNLAFFPMHFVGLAGMPRRIPDYNMMFANFNMVSSIGAFLFGATQLLFLFIVIKCIRGGKPAPAKPWDGADGLEWTVPSPAPYHTFSTPPEVK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0144 CDS 145200 145748 + cytochrome C oxidase assembly protein YP_001185650.1 146305185 5106824 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11 ; involved in the insertion of copper into subunit I of cytochrome C oxidase Oxidative phosphorylation [KEGG] ; Metabolic pathways [KEGG] Unknown[Class 3] PF04442|CtaG_Cox11, Cytochrome c oxidase assembly protein CtaG / Cox11|31|171|3e-47 COG3175|COX11, Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones]. GTGAGCGAGGTCATCGCCACTCGTCGTCTGGTCACCCGCCTGCTGGTCGTGGTGGTGGTGATGTTCTGCTTCGGCATCTTCGTCCTGCCGCCGTTCTACGACGCCATGTGCCGGGTGTTCGGCATCAACGGCAAGACGGCCGGGGCCTACCAGGGCGAGCAGTTGGTGGATGAGCAGCGCCAGGTGCGCGTGCAGTTTCTCGCCACCAACGCCGCCGGCATGGTCTGGGAGTTCGGCCCACAGGCTGACGAACTCCTGGTCCATCCCGGCGAGTCGCGCGACATGCTATTCGTCGCCTACAACCCCAGCGACCAACCCATGACCGCGCAGGCCATTCCCAGCGTATCGCCCTCCAAGGCGGCGGCCTTCTTCCACAAGACCGAGTGCTTCTGCTTCACCCAGCAGGTGCTGCAACCGGGCGAGCGCATCGAGATGCCGGTGCGTTTCATCGTCGACAGAGACCTGCCCAAGGACGTGAAGCACCTGACCCTGGGCTACACCCTGTTCGATATCACCGTGCGCAAACCGCCAGTGGCACAGGCTCCATAA MSEVIATRRLVTRLLVVVVVMFCFGIFVLPPFYDAMCRVFGINGKTAGAYQGEQLVDEQRQVRVQFLATNAAGMVWEFGPQADELLVHPGESRDMLFVAYNPSDQPMTAQAIPSVSPSKAAAFFHKTECFCFTQQVLQPGERIEMPVRFIVDRDLPKDVKHLTLGYTLFDITVRKPPVAQAP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0145 CDS 145760 146656 + cytochrome c oxidase, subunit III YP_001185651.1 146305186 5106825 PFAM: cytochrome c oxidase, subunit III Oxidative phosphorylation [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0015990|electron transport coupled proton transport|IEA ; cellular_component|GO:0016021|integral to membrane|IEA ; molecular_function|GO:0008827|cytochrome o ubiquinol oxidase activity|IEA TIGR02842|CyoC|cytochrome o ubiquinol oxidase, subunit III|equivalog|1.8e-09|1.10.3.-|Energy metabolism|Electron transport PF00510|COX3, Cytochrome c oxidase subunit III|9|297|2e-52 COG1845|CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]. ATGTCGAGTCACGAAAGTCACGAGAACTATTACGTACCGGCGCAGAGCAAGTGGCCTATCGTCGCCACCATCGGCCTGCTGGTCAGCTTCTACGGTGTCGGCACCTGGTTCAACGATCTGTCGGCTGGCCGCGAAGGCTCCAACGGGCCGCTGATCTTCTTCGTCGGTGGGCTGATTCTGGCCTGGATGCTGTTCGGCTGGTTCGGCAACGTGATCAAGGAAAGCCGTGCCGGCCTGTACAGCGCACAGATGGACCGCTCGTTCCGCTGGGGCATGAGCTGGTTCATCTTTTCCGAGGTGATGTTCTTCGCCGCCTTCTTCGGTGCGCTGTTCTACATCCGCATGTGGTCCGGGCCCTGGCTCGGCGGCGAGGGCTCCAAGGGCATCGCCAACATGCTCTGGGAGGGCTTCGAATACAGCTGGCCGCTGCTGCAGAACCCCGATTCCAAGCTGTTCCCGCCGCCCAGCGCGGTGATCGACCCCTGGCATCTGCCGCTGGTCAACACCATCCTGCTGGTATCTTCCAGCTTCACCATCACCTTCGCTCACCATGCGCTGAAGAAGAACCATCGCGGCCCGCTCAAGGCCTGGCTGGCGGCAACCATCGTGCTCGCCCTGGCGTTCCTGTTCTTCCAAGTCGAGGAGTACATCGAGGCCTACACCGAGCTGGGCCTGACCCTGGGCTCAGGCATCTACGGCGCGACCTTCTTCATGCTCACCGGCTTCCACGGGGCGCACGTGACGCTGGGGACCATCATTCTGATCGTGATGCTGGTGCGCATCATGCGCGGGCATTTCAGTGCCGATCAGCACTTCGGCTTCGAGGCGGCCGCCTGGTACTGGCACTTCGTCGATGTGGTCTGGCTGGGGCTGTTCGTCTTCGTCTACGTGCTGTAG MSSHESHENYYVPAQSKWPIVATIGLLVSFYGVGTWFNDLSAGREGSNGPLIFFVGGLILAWMLFGWFGNVIKESRAGLYSAQMDRSFRWGMSWFIFSEVMFFAAFFGALFYIRMWSGPWLGGEGSKGIANMLWEGFEYSWPLLQNPDSKLFPPPSAVIDPWHLPLVNTILLVSSSFTITFAHHALKKNHRGPLKAWLAATIVLALAFLFFQVEEYIEAYTELGLTLGSGIYGATFFMLTGFHGAHVTLGTIILIVMLVRIMRGHFSADQHFGFEAAAWYWHFVDVVWLGLFVFVYVL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0146 CDS 146665 146868 - hypothetical protein YP_001185652.1 146305187 5106826 Cytoplasmic Membrane[Class 3] ATGCTCAAGGCCGCGATCGTCCTAATGCTGCTGGCCACCATCGCCAGCCTGTTCAGCGGCCTGTTCTTCCTGGTCAAGGACGAAGGCCATGGTTACCGCGTAGTCGGCGCGCTGACTGTCCGTGTCGGCCTGACCGCCATCACCGTTGCCCTGGTCGCCTGGGGCTTCTACTCAGGGCAACTGGTCTCTCATGTCACCTGGTAA MLKAAIVLMLLATIASLFSGLFFLVKDEGHGYRVVGALTVRVGLTAITVALVAWGFYSGQLVSHVTW Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0147 CDS 146940 147671 + hypothetical protein YP_001185653.1 146305188 5106827 Cytoplasmic Membrane[Class 3] PF02104|SURF1, SURF1 family|14|116|9e-11 COG3346|COG3346, Uncharacterized conserved protein [Function unknown]. ATGAACGCCTTCCGTCCCGGTTGGCTGCCCAGCCTGCTGGTTGCCCTGCTGCTGCCCGGCCTGCTGTGGCTGGGCGTCTGGCAGCTGCAGCGCGGTGAGGAGAAGCGCGCGTTGCTGGCCAGCTTCGAGGCGCGGCGCCACGCCGAGCCGATCAGTCTCGAACAGCTCGAGCCCATGCCGGACCCCGCCTACCGCCGCGTTCAGCTGCGTGGACACTTCGATGGCGAACACAGCCTGCTGCTGGACAGCCGCATCCGCGACGGCCATGCCGGCGTCGAGGTGCTGCAACCCTTCTACGACCAGCCCAGCGGCCTCTGGGTACTGCTCAACCGCGGCTGGCTGCCCTGGCCCGACCGGCGCACCACGCCGCGCTTCGACACTCCCGATGGCGTGCTGCAGCTCACGGCCTGGGTCTACGTGGCGCCCTCCGGCGGTCTGAACCTGCGTTCCGGTGCGGCGACCGAAGGCTGGCCGCGGCTGATCACCCAGGTCGAGGCCGAAAATCTGTGGCGGCAACTGGGCCGCGGTGGCCTGCCGTTCGAAGCGCGGCTGGAGGACGGTCCGGCCAGCTATCGGGTCGACTGGCCGGTGGTGGCCATGAGCCCGAGCAAACACCTGGGCTATGCGGTGCAGTGGTTCGCCCTGGCGGCCGCGCTGCTTGGCCTGTTCATCTATCTCGGAATCCACAATGCACGGGAGAGTCGTCATGAACCCAGCCATCGCCATGCCTGA MNAFRPGWLPSLLVALLLPGLLWLGVWQLQRGEEKRALLASFEARRHAEPISLEQLEPMPDPAYRRVQLRGHFDGEHSLLLDSRIRDGHAGVEVLQPFYDQPSGLWVLLNRGWLPWPDRRTTPRFDTPDGVLQLTAWVYVAPSGGLNLRSGAATEGWPRLITQVEAENLWRQLGRGGLPFEARLEDGPASYRVDWPVVAMSPSKHLGYAVQWFALAAALLGLFIYLGIHNARESRHEPSHRHA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0148 CDS 147646 148227 + hypothetical protein YP_001185654.1 146305189 5106828 Unknown[Class 3] ATGAACCCAGCCATCGCCATGCCTGAGGCAACTCCGCGCAAGACGCGCGGCCGCCTGCAGTTGCTGCTCCTGCTGGCCGTCGCCATCGGCCCGATGCTGCTGGCCAGCGCCATGTACCAATGGCGTTTCTGGGTGCCGGAGGCGCGCAGCTACCACGGCGTGCTGATCGGCGACGGGCGAACCCTGAGCGATCTCGGCGTGCAGGGCGAGGTGCAGCCGCTCTGGCAGATTCTGGTCACGGCGCCGGGTGCATGCGAGGCCGACTGCCGCGAGCTGGTCTATCTGGCGCGGCAGATCCAGATCGGCCTCAACCGCGAAACGGCGCGGGCAAGCCATGGGCTGGCGCTGGCCGAGCCATTGCCGGCCGAATACGACGCCACCCTCAAGCGCGAATACCCGCGTCTGGGGCGTTACCAACTGGACCCGCAGGCTTACGAGCGCGCCGTGGAGGCGCTCCCCGGCGCGCAGCTATGGCTGATCGACCCGCATGGCAACCTGGTGCTGCGTTATCCCGCCGGCAGCAGGGGCAAGGCGATCCTCGACGATCTGCGTTACCTGCTGAAGATTTCCAAGATCGGTTGA MNPAIAMPEATPRKTRGRLQLLLLLAVAIGPMLLASAMYQWRFWVPEARSYHGVLIGDGRTLSDLGVQGEVQPLWQILVTAPGACEADCRELVYLARQIQIGLNRETARASHGLALAEPLPAEYDATLKREYPRLGRYQLDPQAYERAVEALPGAQLWLIDPHGNLVLRYPAGSRGKAILDDLRYLLKISKIG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0149 CDS 148264 149301 + cytochrome oxidase assembly YP_001185655.1 146305190 5106829 PFAM: cytochrome oxidase assembly Oxidative phosphorylation [KEGG] ; Porphyrin and chlorophyll metabolism [KEGG] ; Metabolic pathways [KEGG] ; Two-component system [KEGG] Cytoplasmic Membrane[Class 3] PF02628|COX15-CtaA, Cytochrome oxidase assembly protein|7|323|1e-18 COG1612|CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]. ATGCATAAACCCGGATACCGCCTCGCCCTGTTCGCGACCCTGTTGGCCGCCGTGGTGGTGCTGCTCGGCGCCTACACCCGGTTGACCCATGCCGGCCTGGGTTGTCCCGACTGGCCTGGCTGCTATGGCTTTCTCGGCGTGCCGATGAGCGAGCACAAGCAGGCCATCGCCGAGGCGCGTTTCCCGGAGGCGCCGGTGGAGGTCGCCAAGGGCTGGTACGAGATGATCCATCGCTACTTCGCCGGTGCCCTTGGGCTGGTGATCCTGGGCATGGCGGTGCAGGCCGTGCGCCGCCGTGGCGATGCGACGCAGCCGCTCAAACTGCCGCTGGCGATCCTGGCACTGGTGATCGTGCAGGCCGCCTTCGGCATGTGGACGGTGACCCTCAAGCTCTGGCCGCAGATCGTCACCGCCCATCTGCTGGGCGGCTTCGCCACCCTCAGCCTGCTGGCGCTGCTCACCCTGCGCCTGTCCGGGCGCCTCGCGCCGCTGCAACTGCCCATGCGCCTGCGCGCGCTGGCCGCCGCCTGCCTGCTGCTGGTGATCGGGCAGATCGCCCTCGGCGGCTGGGTCAGCTCCAACTACGCTGCGGTGGCCTGCGTCGACCTGCCCACCTGCCACGGCGAATGGTGGCCGGCGATGGATTTCGGCAAGGGCTTTCACCTGACCCAGCACATCGGCCCCAACTACCTGGGCGGGCAGCTCGACAGCGACGCGCGCACCGCGATCCACATGAGCCACCGTATCGGCGCCTTGCTGGTGACCCTGGCGCTGCTGCTGCTGGCCTGGCGTCTGCACGCGGCCAAGCTGTCGCGCCTGGCCGGTCTGCTGCTGCTGGCGCTGGCCGTGCAGGTGGGCCTGGGCATCAGCAACGTGATCTTCCATCTGCCGCTGCTGGTGGCCGTCGCGCACAACGCCGGCGGCGCGGCGCTGTTGCTGACGCTGGTGCTGGTCAATTACCGCCTGCGCGCCCCGGCGCCGGTGAAAGTACAGCGAACCTTGGGCAGCGCTCGGCGTCTGCAAGAACAGGGCGCATAA MHKPGYRLALFATLLAAVVVLLGAYTRLTHAGLGCPDWPGCYGFLGVPMSEHKQAIAEARFPEAPVEVAKGWYEMIHRYFAGALGLVILGMAVQAVRRRGDATQPLKLPLAILALVIVQAAFGMWTVTLKLWPQIVTAHLLGGFATLSLLALLTLRLSGRLAPLQLPMRLRALAAACLLLVIGQIALGGWVSSNYAAVACVDLPTCHGEWWPAMDFGKGFHLTQHIGPNYLGGQLDSDARTAIHMSHRIGALLVTLALLLLAWRLHAAKLSRLAGLLLLALAVQVGLGISNVIFHLPLLVAVAHNAGGAALLLTLVLVNYRLRAPAPVKVQRTLGSARRLQEQGA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0150 CDS 149320 150219 + protoheme IX farnesyltransferase YP_001185656.1 146305191 5106830 TIGRFAM: protoheme IX farnesyltransferasePFAM: UbiA prenyltransferase ; converts protoheme IX and farnesyl diphosphate to heme O Oxidative phosphorylation [KEGG] ; Porphyrin and chlorophyll metabolism [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0006783|heme biosynthetic process|IEA ; molecular_function|GO:0008495|protoheme IX farnesyltransferase activity|IEA TIGR01473|cyoE_ctaB|protoheme IX farnesyltransferase|equivalog|1.3e-143|2.5.1.-|Biosynthesis of cofactors, prosthetic groups, and carriers|Heme, porphyrin, and cobalamin PF01040|UbiA, UbiA prenyltransferase family|26|293|1e-40 COG0109|CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones]. ATGGCTACAGTGCTACGAGCCCACTCCGAACACGCCACCTGGCGCGACTATCTGGAGTTGACCAAACCGCGGGTGGTGCTGCTGATGCTGATCACCTCGCTGGTGGGCATGTTCCTCGCCACCCGTGCCGGGGTGCCCTGGACCGTGCTGCTGTTCGGCAACCTGGGGATCGGTCTGTGCGCTGGCGCGGCGGCGGCGGTCAACCACGTGGTGGACCGGCGCATCGACTCGATCATGGCGCGCACGCACAAACGTCCGGTCACTGCCGGGCGGGTTTCGCCGGCGGCGGCGATAGCCTTCGCGTTGCTGCTGGCCACTGCCGGCATGGGGCTGTTGCTGCTGTTCACCAACCAGCTGGCGGCCTGGCTCACCCTCGCTTCGCTACTGGGCTATGCGGTGATCTACACCGGCTTTCTCAAGCGCGCCACGCCGCAGAACATTGTCATCGGCGGTCTGGCCGGCGCTGCGCCGCCCTTGCTCGGCTGGGTGGCGGTGACCGGGCACCTGAGCGCCGAGCCGCTGCTGCTGGTGCTGATCATCTTCGCCTGGACGCCGCCGCACTTCTGGGCGCTGGCGATCCATCGCAAGGCCGAATACGCCAAGGCCGACATCCCCATGCTGCCGGTCACCCATGGCGAGCACTACACCAAGGTGCACATCCTGCTCTACACCCTGGTGATGTTCGCCGTGACCCTGCTGCCCTACGCCATTCACATGAGCGGGCCGCTCTACCTGGTCTGCGCCCTGCTGCTGGGCGCGCGCTTCCTGCACTGGGCCTGGGTGCTGTACCGTGACAGCAAACCGCACGCGGCGATCAACACCTTCAAGTACAGTATCTGGTACCTGTTCCTGCTGTTCATCGCTTTGCTGGCGGACCACTACCTGCTGCTGAATATCTAG MATVLRAHSEHATWRDYLELTKPRVVLLMLITSLVGMFLATRAGVPWTVLLFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPVTAGRVSPAAAIAFALLLATAGMGLLLLFTNQLAAWLTLASLLGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGHLSAEPLLLVLIIFAWTPPHFWALAIHRKAEYAKADIPMLPVTHGEHYTKVHILLYTLVMFAVTLLPYAIHMSGPLYLVCALLLGARFLHWAWVLYRDSKPHAAINTFKYSIWYLFLLFIALLADHYLLLNI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0151 CDS 150372 151004 + electron transport protein SCO1/SenC YP_001185657.1 146305192 5106831 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen ; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC Cytoplasmic Membrane[Class 3] PF00578|AhpC-TSA, AhpC/TSA family|53|185|3e-09 ; PF02630|SCO1-SenC, SCO1/SenC|56|184|4e-29 COG1999|COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only]. ATGACGCGTACTCATACCACCGTTTTCGTTCTCGTTGCCATCGTGGCGCTGGTGCTGGGCCTGACCGTCAACAAGGTGCTCAACAGCAGGAGCCAGGGCGACCCGGCGGCGCTGCTCGATGCCGGCATCGTGCTGCTGCCGCAGAACCGCAGCCTGCCGGCGCTGACCCTGATCGATCAGGACGGCAAGGAGGTCGCGGTGGATCAGCTCAAGGGTGACTGGAAGCTGTTGTTCTTCGGCTACACCTTCTGCCCGGACATCTGCCCGGCCACCCTCGCCCAGCTGCGCCAGTTGCAGACGCAACTGCCTGAGGAAACCCGCGCGCGGCTGAAGGTGGTGATGGTCAGCGTCGATCCCCATCGGGACACGCCGGAGCAACTGAGCAAGTACCTGAACTACTTCGACGCCGGCTTCAAGGGCCTGACCGGCGAGGAAGCGACGCTGCAGAAATTCGCCAATTCGGTGAGCATCCCCTATATCCCGGCCGACACCAGCAAGGAAAACTACACCGTCGATCACAGCGGCAATTTGGTGATCATCGGCCCGGATGGCACCCAGCGCGGCTTCATCCGCGCGCCGATCAACAACGCCAAGCTGGCCGCGCAACTGCCGGGGCTGGTTTCAGGCTCGTAG MTRTHTTVFVLVAIVALVLGLTVNKVLNSRSQGDPAALLDAGIVLLPQNRSLPALTLIDQDGKEVAVDQLKGDWKLLFFGYTFCPDICPATLAQLRQLQTQLPEETRARLKVVMVSVDPHRDTPEQLSKYLNYFDAGFKGLTGEEATLQKFANSVSIPYIPADTSKENYTVDHSGNLVIIGPDGTQRGFIRAPINNAKLAAQLPGLVSGS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0152 CDS 151066 152016 - homoserine kinase YP_001185658.1 146305193 5106832 TIGRFAM: homoserine kinasePFAM: aminoglycoside phosphotransferase ; catalyzes the formation of O-phospho-L-homoserine from L-homoserine Glycine, serine and threonine metabolism [KEGG] ; Metabolic pathways [KEGG] 2.7.1.39 Cytoplasmic[Class 3] biological_process|GO:0009088|threonine biosynthetic process|IEA ; molecular_function|GO:0004413|homoserine kinase activity|IEA TIGR00938|thrB_alt|homoserine kinase|equivalog|5.6e-91|2.7.1.39|Amino acid biosynthesis|Aspartate family PF01636|APH, Phosphotransferase enzyme family|31|255|3e-26 COG2334|COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only]. ATGTCGGTATTCACCCCCCTGGAGCGTCACGAGCTCGAAGTCTTCCTGGCGCCCTACGGGCTTGGCCGGTTGCGCGACTTCCAGGGCATCGCTGCAGGCAGCGAAAACAGCAACTTCTTCGTCAGCCTGGAGCAGGGCGAGTACGTTCTGACCCTGGTCGAACGCGGCCCGGTGGCCGACCTGCCGTTCTTCATCGAACTGCTCGACATACTGCACGACGCCGGCCTGCCCGTGCCCTACGCCCTGCGCACGCAGCAAGGCGAAGCGCTGCGCAGCCTGGCGGAAAAGCCGGCGCTGCTGCAGCCGCGTCTGGCCGGCAAGCATGTGCGCGAGGCCAACACGCACCACTGCCAGGAGGTCGGCAGTCTGCTGGCACGCATCCATCTGGCCACCCGCGATGCCCCCATCGAAAGACGCAGCGATCGCGGCCTGGACTGGATGCTGGCCGAAGGCCCGAGCCTGGCCCTCAAGCTCGACGAGCAGGCGTTGCCGCTGCTGCGCGATGCGCTGGCCGAGATCGCCGAATTGAAGCCGCGCATCCTCGCCCTGCCGCGGGCGAATCTGCATGCCGATCTGTTCCGTGACAACGTGCTGTTCGACGGCAACCACCTGGCTGGCGTGATCGACTTCTACAATGCCTGCTCGGGGCCGATGCTCTACGACCTGGCGATTACCCTGAACGACTGGTGCTCGCATGAGGACGGCAGCCTGGACGGCGCTCGCGCCCGCGCGCTGCTCGGCGCCTACGCGGCGCTGCGTCCCTTCACCGCCGCCGAGGCCGAGCTGTGGCCGACCATGCTGCGCGTGGCCTGCGTGCGCTTCTGGCTGTCACGCCTGATCGCGGCCGAGTCGTTCGCCGGGCAGGAAGTGCTGATCCACGATCCGGCCGAATTCCAGCGGCGCCTGGCGCAGCGCCAGCAGGTCAATCTGCCGCTGCCATTCGCGCTGTAA MSVFTPLERHELEVFLAPYGLGRLRDFQGIAAGSENSNFFVSLEQGEYVLTLVERGPVADLPFFIELLDILHDAGLPVPYALRTQQGEALRSLAEKPALLQPRLAGKHVREANTHHCQEVGSLLARIHLATRDAPIERRSDRGLDWMLAEGPSLALKLDEQALPLLRDALAEIAELKPRILALPRANLHADLFRDNVLFDGNHLAGVIDFYNACSGPMLYDLAITLNDWCSHEDGSLDGARARALLGAYAALRPFTAAEAELWPTMLRVACVRFWLSRLIAAESFAGQEVLIHDPAEFQRRLAQRQQVNLPLPFAL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0153 CDS 152032 152316 - hypothetical protein YP_001185659.1 146305194 5106833 Unknown[Class 3] ATGGGTACAGCCAAACGCCTGTTGCTGGTCGGCCTGCTGGCCTGCCTTCCGCTTGCCGCGCACGCCGATGACCCGGTGTCCGGCGACCCGGACGTGACCATCCGCCAGGATGGCGACCGCACCATCGAGGAATACCGCGTCAACGGCTTCCTGTACGCGATCAAGGTGATCCCGAAGAACGGCAAGCCCTACTTCCTGGTGCGCGCCGACGGCAGCGACGGCAACTTCATACGCTCGGACGACCCGGACATGCTGATCCCGTCCTGGGAAATCTTCAGTTGGTAA MGTAKRLLLVGLLACLPLAAHADDPVSGDPDVTIRQDGDRTIEEYRVNGFLYAIKVIPKNGKPYFLVRADGSDGNFIRSDDPDMLIPSWEIFSW Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0154 CDS 152534 155329 + DNA polymerase I YP_001185660.1 146305195 5106834 TIGRFAM: DNA polymerase IPFAM: DNA-directed DNA polymerase ; has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair Purine metabolism [KEGG] ; Pyrimidine metabolism [KEGG] ; Metabolic pathways [KEGG] ; DNA replication [KEGG] ; Base excision repair [KEGG] ; Nucleotide excision repair [KEGG] ; Homologous recombination [KEGG] 2.7.7.7 Cytoplasmic[Class 3] biological_process|GO:0006260|DNA replication|IEA ; molecular_function|GO:0003887|DNA-directed DNA polymerase activity|IEA TIGR00593|pola|DNA polymerase I|superfamily|0|2.7.7.7|DNA metabolism|DNA replication, recombination, and repair PF01367|5_3_exonuc, 5'-3' exonuclease, C-terminal SAM fold|170|275|1e-28 ; PF00476|DNA_pol_A, DNA polymerase family A|549|930|1e-141 ; PF02739|5_3_exonuc_N, 5'-3' exonuclease, N-terminal resolvase-like domain|5|166|9e-54 ; PF01612|3_5_exonuc, 3'-5' exonuclease|330|519|6e-31 COG0749|PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair]. ATGAGCCAAGCTCCCCTCGTTCTGGTCGACGGTTCCTCGTATCTGTACCGCGCCTTCCACGCCCTGCCGCCGCTGACCACCTCCAAGGGCATGCCTACCGGTGCGGTGAAGGGCGTGCTGAACATGCTCAAGAGCCTGCGCAAGCAGTACCCCGACAGCCCCTTCGCCGTGGTCTTCGATGCCAAGGGCGGTACCTTCCGCGACGAGCTGTTCGCCGAGTACAAGGCCAACCGCCCGTCCATGCCGGACGAGTTGCGCGTGCAGGTCGAGCCGCTGCACGCCAGCGTGCGCGCCCTGGGCCTGCCGCTGCTGTGCGTGGAGGGGGTCGAGGCCGACGACGTGATCGGCACCCTGGCCCGCCAGGCCGCGGCGCAGCAGCGCGACGTGGTGATCTCCACCGGCGACAAGGACATGGCGCAGCTGGTCTGCCCGCACGTTACGCTGGTCAACACCATGACCGGAAGTGTCTATGACGAAGGTGGCGTGAAAGAGAAATTCGGTGTCGGTCCCGAGCTGATCATCGACTACCTGGCGCTGATGGGCGACAAGGTCGACAACATCCCCGGCGTGCCCGGCGTTGGCGAAAAGACCGCGCTGGGCCTGCTGGTCGGCGTCGGCGGTGGCCTCGACGTGCTCTACGCCAACCTCGACAAGGTGCCCGAGCTGCCGATCCGCGGCGCCAAGAGCCTGCCGGCCAAGCTCGAGGAACACCGCGAGATGGCCTATCTCTCCTACCAGCTGGCCACCATCAAGACCGATGTGCCGCTGAACATCGAGATCGATTCGCTGCACCCGGGCGAGCCGGATCAGGCGACCCTGGTGCAGCTGTACGGCGAGCTCGAATTCAAGGCCTGGCTCGACGAGCTGTTGCGGCAGAACAAGGCCCTGGCTGCCAAGGCCGCCGTGCCGGCCGGCGACCTGTTCGCCGAGCCCGCGGGGCCTGCTGCCGAGGAAACGGCCGAGACGCCGCCGATGGGCGCGGGCGACTACGAGCTGGTGCTGGAGCAGGCACAGTTCGACGCCTGGCTGAAGAAACTGCAGCAGGCCGAGCTGATCGCCTTCGACAGCGAAACCACCAGTATCGACGCGCAGCAGGCGCAGCTGGTCGGTCTGTCCTTCGCGGTCAAGGCCGGCGAGGCTGCCTACGTGCCGCTGGCGCACAGCTATATGGGCGTGCCGCAGCAGCTCGATCGCGATGCCGTGCTCAAGGCGCTCAAACCGATCCTCGAAGACCCGGCCAAGGCCAAGGTCGGCCAGCACGCCAAGTACGACATCAATGTCCTGGCCAATGCCAGTACCCCGATCGCCGTGCAGGGCGTGGCCTTCGATACCATGCTCGAATCCTACGTGCTGGATTCGACCGCCACGCGCCACGACATGGACAGCCTGGCCCTGAAGTACCTGGGCCACAGCACCATCCGCTTCGAGGACATCGCCGGTCGGGGCGCCAAGCAGCTGACCTTCGACCAGATCGCCCTGGAGCAGGCCGGCCCTTACGCCGCCGAGGACGCCGACGTGACCCTGCGTCTGCACCAGGAGTTGTGGGGCAGGCTTGAGGCCGTGCCGTCACTGGCCAAGGTGCTGCGCGAGATCGAAATTCCGCTGGTGCCGGTGCTCGCGCGCATCGAGCGCAACGGCGCGCTGGTCGATGCCAAACTGCTCGGCGAGCAGAGCGTCGAGCTGGGCGAAAAACTGGTGGAACTGGAGCGCAAGGCCTTCGAGATCGCCGGCGAGGAATTCAACCTGGCCTCGCCCAAGCAGCTGGGCGTGATCCTCTATGAAAAACTCGGCTACCCGGTGATCAGCAAGACCGCCAAGGGCCAGCCCTCCACTGCCGAGGCAGTACTCGCCGAGCTGGCCGAGCAGGACTTCGAGCTGCCCAAGGTGCTGATGCAGTACCGCTCCCTGAGCAAGCTCAAGAGCACCTACACCGACAAGCTGCCGGAACAGATCAACCCGCGCACCGGGCGTATCCACACCAGCTACCACCAGGCGGTGGCGGCGACCGGCCGACTGTCGTCGAGCGATCCGAACCTGCAGAACATCCCGATCCGCACCGCCGAGGGCAGGCGCATCCGCCAGGCCTTCGTCGCGCCCAAGGGCTACAAGATGATGGCGGCGGACTACTCGCAGATCGAGCTGCGCATCATGGCCCACCTGGCCAAGGACGAAGGCCTGCTCGACGCCTTCCGCCATGATCTGGACGTGCACAAGGCCACTGCCGCCGAAGTGTTCGGCGTGGCGCTGGAGGAGGTGACCAGTGACCAGCGGCGCAAGGCCAAGGCCATCAACTTCGGCCTGATCTACGGCATGAGCGCCTTCGGCCTGGCCAAGCAGATCGACGTCGAGCGCAAGGAGGCGCAGGCCTATATCGACCGCTACTTCGCCCGCTATCCCGGTGTGCTGAGCTACATGGAGCGCACCCGCGCGCAGGCTGCCGAGCAGGGCTATGTGGAGACCGTGTTCGGTCGCCGCCTGTACCTGCCGGAGATCCACGCGCAGAACCAGGCCATGCGCAAGGGCGCCGAGCGCGCGGCGATCAACGCGCCGATGCAGGGCACCGCGGCGGACATCATCAAGCGCGCGATGATCGCTGTGGATGACTGGCTGCAAGGCAGCGGCATCGACGCCCGCATCATTCTCCAGGTGCACGACGAACTGGTTCTTGAAGTGCGCGAGGATCTGCTCGAAGAGGTCGGCGCCCAGCTCAAGGCGCTGATGGGTGGGGCCGCGCAGCTGGATGTGCCCCTGCTGGTGGAAGTCGGCGTAGGCGCCAACTGGGACGAAGCGCATTGA MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAKGGTFRDELFAEYKANRPSMPDELRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARQAAAQQRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDEGGVKEKFGVGPELIIDYLALMGDKVDNIPGVPGVGEKTALGLLVGVGGGLDVLYANLDKVPELPIRGAKSLPAKLEEHREMAYLSYQLATIKTDVPLNIEIDSLHPGEPDQATLVQLYGELEFKAWLDELLRQNKALAAKAAVPAGDLFAEPAGPAAEETAETPPMGAGDYELVLEQAQFDAWLKKLQQAELIAFDSETTSIDAQQAQLVGLSFAVKAGEAAYVPLAHSYMGVPQQLDRDAVLKALKPILEDPAKAKVGQHAKYDINVLANASTPIAVQGVAFDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGRGAKQLTFDQIALEQAGPYAAEDADVTLRLHQELWGRLEAVPSLAKVLREIEIPLVPVLARIERNGALVDAKLLGEQSVELGEKLVELERKAFEIAGEEFNLASPKQLGVILYEKLGYPVISKTAKGQPSTAEAVLAELAEQDFELPKVLMQYRSLSKLKSTYTDKLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKMMAADYSQIELRIMAHLAKDEGLLDAFRHDLDVHKATAAEVFGVALEEVTSDQRRKAKAINFGLIYGMSAFGLAKQIDVERKEAQAYIDRYFARYPGVLSYMERTRAQAAEQGYVETVFGRRLYLPEIHAQNQAMRKGAERAAINAPMQGTAADIIKRAMIAVDDWLQGSGIDARIILQVHDELVLEVREDLLEEVGAQLKALMGGAAQLDVPLLVEVGVGANWDEAH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0155 CDS 155776 156426 - engB ribosome biogenesis GTP-binding protein YsxC YP_001185661.1 146305196 5106835 PFAM: GTP-binding protein, HSR1-related ; binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ; binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential Unknown[Class 3] biological_process|GO:0042254|ribosome biogenesis|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0003924|GTPase activity|IEA ; molecular_function|GO:0005525|GTP binding|IEA ; molecular_function|GO:0043022|ribosome binding|IEA TIGR03598|GTPase_YsxC|ribosome biogenesis GTP-binding protein YsxC|equivalog|4.3e-113||No Data|No Data PF01926|MMR_HSR1, GTPase of unknown function|32|152|2e-23 COG0218|COG0218, Predicted GTPase [General function prediction only]. ATGCTCCCGAAGAATCCCATCATCGGACTGTGCCAGCAGGCCAGCTTCCTCATCAGTGCCGCCAAGGTCGATCAGTGCCCCGAGGACAGCGGCCTGGAAGTGGCTTTCGCCGGCCGCTCCAACGCCGGCAAGTCGAGCGCGCTGAATACCCTGACCCATGCCAGCCTGGCGCGTACCTCGAAAACCCCCGGTCGTACCCAGCTGCTCAATTTCTTCCGCCTGGATGACGAGCGCCGCCTGGTGGACCTGCCCGGCTACGGCTACGCCAAGGTGCCGATCCCGCTCAAGCAGCACTGGCAGAAGCACCTGGAAGCCTACCTGGGCAGTCGCGAGAGCCTCTGCGGCCTGGTGCTGATGATGGATATCCGCCACCCGCTGACCGAGTTCGACCGGATGATGCTGGACTGGTCGGTGGCCAGCGGCATGCCGCTGCACATTCTGCTGACCAAGGCCGACAAGCTGGCCTTCGGCGCAGCGAAGAACGCATTGCTCAAGGTGCGTCAGGAAATCCGCAAGCAGTGGGGCGAGGGCATCAGCATCCAGCTGTTCTCGGCGCCCAAGCGCATGGGCGTGGAAGAGGCACAGATGGTACTGGCCGGCTGGCTGGACCTGTTGCCGCAAGAGGATGAAGAAAGCGCCGAGGAGGCCTGA MLPKNPIIGLCQQASFLISAAKVDQCPEDSGLEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFRLDDERRLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRESLCGLVLMMDIRHPLTEFDRMMLDWSVASGMPLHILLTKADKLAFGAAKNALLKVRQEIRKQWGEGISIQLFSAPKRMGVEEAQMVLAGWLDLLPQEDEESAEEA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0156 CDS 156671 156961 + Cytochrome c5-like protein YP_001185662.1 146305197 5106836 Periplasmic[Class 3] COG3245|CycB, Cytochrome c5 [Energy production and conversion]. ATGAAGAAAATGCTGCTCGCGGCTGCCGTTTTGATGTTGTCTTTCAATGGCCATGCCGCTCAGGATCCACAAGCCGTGTACGACCGCTCCTGTGGCGTCTGCCACAATGGCCAGATTCCCACCGCGCCGCTGAAGGGCGACAAGGCCGCCTGGGAACCACGTCTGGCCAAGGGTATGGATGCACTGGTGGAGAGCGTCACCAATGGTTTGAATGCCATGCCGCCGCGCGGTCTGTGCATGGACTGCACCGCAGAGGACTACCAGGCGGTCATCAAGCTGATGACCGAATGA MKKMLLAAAVLMLSFNGHAAQDPQAVYDRSCGVCHNGQIPTAPLKGDKAAWEPRLAKGMDALVESVTNGLNAMPPRGLCMDCTAEDYQAVIKLMTE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0157 CDS 157010 157615 + cytochrome c, class I YP_001185663.1 146305198 5106837 PFAM: cytochrome c, class I Periplasmic[Class 3] PF00034|Cytochrom_C, Cytochrome c|24|100|5e-07 COG2863|COG2863, Cytochrome c553 [Energy production and conversion]. ATGAACAAAGTACTCGTGAGTCTGCTGTTGACCCTGGGCCTCACCGGCGTGGCACAGGCTGCTGGCGATGCCGAAGCCGGTCAGGGCAAAGTCGCTGTCTGTGGTGCCTGCCATGGTGCCGATGGCAACAGTCCCGCGCCAAACTTCCCCAAGCTGGCCGGTCAGGGCGAGCGCTACTTGCTCAAGCAGCTGCACGACATCAAGTCCGGCGCGCGTCCGGTGGTCGAGATGACCGGCATGCTGGACAACCTCAGCGATCAGGACATGGCCGATATCGCCGCCTACTTCGCCAGCCAGCAGATGAGCGTCGGCGCTGCCGATCCGAAGCTGGTCGAGCGCGGTGAAGCGCTGTTCCGCGGCGGCAAGCTGGAAGAGGGCATGCCGGCCTGCACCGGTTGCCATTCGCCTGATGGTGCCGGTCTGGCCGCCGCTGGTTTCCCGAAACTGGGTGGCCAGCACGCCGCCTACGTGGCCAAGCAGCTGACCGATTTCCGCGAGGGTGATCGCACCAACGACGGCGACGCGATGATCATGCGTGCCATCGCTGCCAAGCTGAGCAACAAGGATATCGAGGCGGTTTCCAGCTTCATCCAGGGTCTGCACTAA MNKVLVSLLLTLGLTGVAQAAGDAEAGQGKVAVCGACHGADGNSPAPNFPKLAGQGERYLLKQLHDIKSGARPVVEMTGMLDNLSDQDMADIAAYFASQQMSVGAADPKLVERGEALFRGGKLEEGMPACTGCHSPDGAGLAAAGFPKLGGQHAAYVAKQLTDFREGDRTNDGDAMIMRAIAAKLSNKDIEAVSSFIQGLH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0158 CDS 157755 158405 + DSBA oxidoreductase YP_001185664.1 146305199 5106838 PFAM: DSBA oxidoreductase Periplasmic[Class 3] PF01323|DSBA, DSBA-like thioredoxin domain|54|187|9e-11 COG2761|FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]. ATGCCTACTACCAAGGAGTACCCCATGCGTAACCTGATTCTCGGCGCCGCTCTGGCCATCAGCAGCCTGTTCGGGATCACCGCTCATGCCGAGCCGGTGGCTGGCCAGCAGTACGTCGAGCTGAAGAGCCCGGTGCCGGTGTCCAAGCCTGGCAAGGTCGAGGTGGTGGAGCTGTTCTGGTATGGCTGCCCGCATTGCTACCAGTTCGAAGCGACCCTCAACCCCTGGGTCGAGAAGCTGCCGGACGACGTCAACTTCGTGCGCATCCCCGCCCTGTTCGGCGGTATCTGGAACGTCCACGGCCAGGCGTTCATCACCCTGGAAATGATGAAGGTCGAGCACAAGGTGCATGACGCCGTGTTCACCGCCATCCATCAGGAGAAGAAGAAGCTGGGCTCCGCCGAGGAATTCGCCGACTTCGTCGCCACCCAGGGTGTCGATCGCGACGCCTTCCTCAAGACCTTCAACTCCTTCGCCGTCAAAGGCCAGATGGAAAAGGCCAAGAAGCTGGCCATGGCCTACCAGATCACCGGTGTGCCGGTGATGATCGTCGGCGGCAAGTACCGCTTCGACCTGGGCTCGGCCGGTGGCCCGCAGCAGACCCTCGAGGTCGCCGACCACCTGATCGCAAAGGAGCGCGCCGCGCTTTAA MPTTKEYPMRNLILGAALAISSLFGITAHAEPVAGQQYVELKSPVPVSKPGKVEVVELFWYGCPHCYQFEATLNPWVEKLPDDVNFVRIPALFGGIWNVHGQAFITLEMMKVEHKVHDAVFTAIHQEKKKLGSAEEFADFVATQGVDRDAFLKTFNSFAVKGQMEKAKKLAMAYQITGVPVMIVGGKYRFDLGSAGGPQQTLEVADHLIAKERAAL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0159 CDS 158425 159297 + Endonuclease/exonuclease/phosphatase YP_001185665.1 146305200 5106839 PFAM: Endonuclease/exonuclease/phosphatase Cytoplasmic[Class 3] PF03372|Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family|34|270|2e-11 COG3568|ElsH, Metal-dependent hydrolase [General function prediction only]. ATGTTGCGCCGCTGGCGAAAGACCCGTGCGGTTGGCCTGTGCGACCCACGGGTCAACCCGCACTGCCAGCCAAACGCCGAATGGCCCAGCGACGGCCTGTTGCGTCTGCTCAGTTTCAACGTGCAGGTCGGCATCAACACCCAGCGTTACCATCACTACCTGACTCGCAGCTGGCAGCATCTGCTGCCGCATGCCGGACGTGCCGGCAATCTGCAGCGCATCGGCGACCTGCTCGCCGACTTCGATCTGGTCGCCCTGCAGGAGGTCGATGGCGGCAGCCTGCGTTCGGGCTACGTCAATCAGGTGGAATATCTGGCCCAGCAGGGCGCCTTTCCCTACTGGTATCAGCAGCTCAATCGCAACCTCGGGCGCTTCGCCCAGCACAGCAACGGCGTGCTCAGCCGTCTGCGTCCGACCCTGCTGGAGGATCACCCGCTGCCGGGGCCGCCAGGGCGCGGGGCGATTTTCCTGCAGCTGGGCGAGGGCGAACACGCCCTGTGCGTGGTGATGATGCACCTCGCCCTGGGCGCGCGTACCCGTACCCGGCAGCTGGCCTACATCCGCGAGCGGGTCGGCGAGTTCCGCCACCTGGTGTTGATGGGCGACATGAACACCCATGCCGTCGACCTGCTGGAGAACTCGCCGCTGCGCGATCTCGGCCTGATCGCCCCGCAGGCCGAAGCGACCTTTCCCAGCTGGCGGCCACAGCGCTGCCTGGACCATATCCTGCTCAGTTCCGAACTCGAACTGGGGCGCGTCGACGTACTCAGCCAGCCGATTTCCGACCACCTGCCGGTGGCCGTGGAAATCCGTCTGCCGGGCGCTCAGAATGCTGCGCCAATGCCTATGCTGAAGACGCCATCCCCTGAGTAA MLRRWRKTRAVGLCDPRVNPHCQPNAEWPSDGLLRLLSFNVQVGINTQRYHHYLTRSWQHLLPHAGRAGNLQRIGDLLADFDLVALQEVDGGSLRSGYVNQVEYLAQQGAFPYWYQQLNRNLGRFAQHSNGVLSRLRPTLLEDHPLPGPPGRGAIFLQLGEGEHALCVVMMHLALGARTRTRQLAYIRERVGEFRHLVLMGDMNTHAVDLLENSPLRDLGLIAPQAEATFPSWRPQRCLDHILLSSELELGRVDVLSQPISDHLPVAVEIRLPGAQNAAPMPMLKTPSPE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0160 CDS 159403 160971 - transposase IS66 YP_001185666.1 146305201 5106840 PFAM: transposase IS66 Cytoplasmic[Class 3] PF03050|Transposase_25, Transposase IS66 family|138|330|8e-64 COG3436|COG3436, Transposase and inactivated derivatives [DNA replication, recombination, and repair]. ATGATCGCCGTGCCCGCCCCCCTTCCTGACGACCCAATCCTGCTCAAGCATTTACTGCTGCTGGCCAGTGAACAGGCGGCTGCGAAAGATGCTCGCATAGAACAACTTCAGGAACAGGTCGCCCTGCTGCGCCACAAGTTGTTCTCGCCCAAGTCCGAGCGCAGCCCTGAAGACGCCGACTCACCGCAGTTGGCCATGTTCAACGAGGTCGAAGAGCTGATCGAAGCGGCCGCTGCGCCAAGCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGAAATCGTTGCGCCGGTCAAGCGCCGTGGCAAGCGCAAGCCGTTGCCGGCCAACCTGCCGCGTGTCGAAGTCATCCACGACCTGCCCGAGCACGAGCTGACTTGCGCCTGTGGCGCCTGCAAACAAGTCATCGGCGAGGAGACCAGCGAACAGCTGGAGATTATCCCGATGCAGGTGCGGGTCATCCGCCATATCCGCAAGACCTACGCCTGCAAGGCCTGCGAAGCGGCGCCGCTCACTGCCGACAAGCCGGCCCAACTGATCGAGAAGAGCCTGGCCAGCCCCAGCGTGTTGGCCATGCTGCTGACCACCAAGTACGCCGACGGCATCCCGCTGTACCGCTTCGAGAAGATGCTCAGCCGCCACGGCGTCGACATACCACGCCAGACCCTGGCGCGCTGGGTGATCCAGAGCGGTGAACAGCTGCAACCGCTGCTCAACCTGCTGCGCGACAAGCTGCTCGAATACCCCGTTTTGCACTGCGACGAAACGCGCCTGCAGGTGCTGCATGAACCGGGACGCGATCCCACCGCGCAGTCCTGGATGTGGGTACAAAGCGGTGGACCACCGGATAAGCCGGTGATCCTCTTCGACTACACCGCCAGCCGCGCGCAGGAGGTGCCGCTGCGCTTGCTCGACGGCTATCGCGGCTACCTGATGACCGACGACTACGCCGGCTACAACGCCGTGGCCGCGCAAGAAGGCATCGAACGCCTCGGCTGCTGGGCGCATGCGCGGCGCAAGTTCGTCGAGGCGCAGAAAGTGCAACCCAAGGGCAAAACCGGCCGTGCCGACATGGCGCTGAACCTGATCAACAAGCTCTACGGCATCGAGCGTGACCTGAAGGACGCCTGCGATACCGAGCGCCTGGTCGCCCGTCAGCAACGCAGCCAGCCGCTGCTCGATCAACTCAAGACCTGGCTGGACAAGACCCAGCCGCAGGTCGTCGGGCAGACGGCGCTGGGCAGGGCGGTGAACTACCTGGCCAGCAACTGGAGAAAGCTGGTGCGCTACGTCGAAGGTGGACATCTGCCGATCGACAACAACCGCGCGGAGAACGCCATCCGCCCGTTCGTTATCGGGCGCAAGAACTGGCTGTTCAGCGACACGCCCAAGGGGGCCACGGCCAGCGCACAGATCTACAGCCTGATCGAAACCGCCAAGGCCAATGGCCAGGAGCCTTACGCCTGGCTGCGCCACATCCTCGAACGCCTGCCGGCCGCCAATAGCGTCGAGGATTACGAAGCGCTGCTGCCGTGGAATTGCTCGCCAGTGAGCGCATCCTGA MIAVPAPLPDDPILLKHLLLLASEQAAAKDARIEQLQEQVALLRHKLFSPKSERSPEDADSPQLAMFNEVEELIEAAAAPSEAEAEAEAEAEAEEIVAPVKRRGKRKPLPANLPRVEVIHDLPEHELTCACGACKQVIGEETSEQLEIIPMQVRVIRHIRKTYACKACEAAPLTADKPAQLIEKSLASPSVLAMLLTTKYADGIPLYRFEKMLSRHGVDIPRQTLARWVIQSGEQLQPLLNLLRDKLLEYPVLHCDETRLQVLHEPGRDPTAQSWMWVQSGGPPDKPVILFDYTASRAQEVPLRLLDGYRGYLMTDDYAGYNAVAAQEGIERLGCWAHARRKFVEAQKVQPKGKTGRADMALNLINKLYGIERDLKDACDTERLVARQQRSQPLLDQLKTWLDKTQPQVVGQTALGRAVNYLASNWRKLVRYVEGGHLPIDNNRAENAIRPFVIGRKNWLFSDTPKGATASAQIYSLIETAKANGQEPYAWLRHILERLPAANSVEDYEALLPWNCSPVSAS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0161 CDS 160991 161350 - IS66 Orf2 family protein YP_001185667.1 146305202 5106841 PFAM: IS66 Orf2 family protein Cytoplasmic[Class 3] PF05717|Transposase_34, IS66 Orf2 like protein|10|116|4e-35 ATGATGCGTCCCGACGCCAAGGTGCAGAAGGTCTACCTCTACCCAAAACCCGTCGATTTCCGCAAATCCATCAACGGCCTGGCCGCTCTGGTCGAGCTGGACATCAAGGTGGAAGTGTTCAACCCCGTGCTGTTCGTGTTCCTCAACCGCACCCGCAGTCAGGTCAAGATCCTCTACTGGGAGCGCAATGGCTTCTGCCTGTGGCTCAAGCGTTTGGAAGCCGAACGCTTCAAGACCAAGCCCGATGCCGGCGACGAGGCCATCGAGCTGACGGTCGATGAGTTGAACTGGCTGCTCGACGGCATCGACCTGTGGCGCAACCGTCCGCACCAGATACTGACGCCGCGTTTCGTGACCTGA MMRPDAKVQKVYLYPKPVDFRKSINGLAALVELDIKVEVFNPVLFVFLNRTRSQVKILYWERNGFCLWLKRLEAERFKTKPDAGDEAIELTVDELNWLLDGIDLWRNRPHQILTPRFVT Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0162 CDS 161388 163232 + diguanylate cyclase YP_001185668.1 146305203 5106842 TIGRFAM: diguanylate cyclasePFAM: GGDEF domain containing protein ; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein Cytoplasmic[Class 3] biological_process|GO:0009966|regulation of signal transduction|IEA ; molecular_function|GO:0009975|cyclase activity|IEA TIGR00254|GGDEF|diguanylate cyclase (GGDEF) domain|domain|5.7e-47||Regulatory functions | Signal transduction|Small molecule interactions | Other PF00990|GGDEF, GGDEF domain|454|610|1e-41 COG3706|PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]. ATGATCTGCGGGCTATGGGCAGGTGGGGTTTATGGAGCGGATACGGAGCAGCAGGAAAAGCTCGAGCGGCGCTGGGAGCTGCGCCTGGATCTGCTGCGCCGTGGCCTGGTGCGCAGCAGCCTGGCCGCCGAGGGGGCGGACAAGGCGGTCGACCAGTGCATGCAGGAGATGCGCGACATCTTGCGCCGCGACGACATGGATGCCGCGCTGGGCGGTTTGATTCCGCGCCTGGAAAAGGCCGTACTGGATTCGGAGCAGCGTCGCCAGCAGCGCGCCGAAGAGGCGACGGCGGCGCTGGCCGGCCTGGTCGAGCAGCTGCAGCGCCTGCAGCCGCCGCGCGAGGTGCGCAAGGCGCTGAAGAGCCTCGGCAAGCAGTTGCAGGCCGCCGTGGGTCAGCAGCATCAGCTGCCGGCGCTGCTCAGCCAGCTGCGCAACCTGCAGGGGCAGGCGCTGACCGTGCTGCAGGCGCCGGCCCAGGAACAGCCGGGGTTGTTGCAGCGCCTGTTCGGCAGTCGTGGCGATGCCGCCGAACAGGCGCAACCGGCCGAACAGGCGGCTGCCGCTGCTGGCGAGACGCAGCAGATCGCCGCCGAACTCCTCGACTCGCCGGCCGCGCCGGTGCCCGCGCCTGCCGCCGCGCTCAGCACTGCCGCGCCTGCCGCCGCGCTCAGCACTGCCGCGCCTGCACGATCGTCATTGGCGCCGCGGGCGGCGCTGGACAGCTTGCCGTTGCCGCCCGGCCTGGTGCCGCAGCCCGAGGATGAGGATAGCCCCTTCTCGCTGCCGACCAGCGAGCCGGGCTACAGCGCCGTGGCGCCGCATATCGCCAGCAGCCTGCGCAGCCTGCTCGATGAGCTCGAACTGCCGGCCCGGCATCGGCCGCAGGGCGAAGCCCTGCGTCTGCGCCTGGAAGGTGGCCTGAACTGGTACGAACTGGTGCCGGTGCTGGATGACCTGGCGGTGCTGGTGCTGGCCGTGACCGACAGCGGTCAGCGCGAATTCGCCGGCTACCTCAAGCAGCTCAACGAGCGGCTGGAAGCCTTCCTCGGCACCCTCAGCGAGGCGCACGAAGGCTACAGCGCGTCGGTGGAAAGCGCGCGCAGCTTCAACCAGGAGCTGCGCGACCAGGTCACCGATCTGCAGAACCGCGTGCAGGAGGCTGCCGATCTGGAGGCACTCAAGCAGGCGCTGGAGCAGCGCCTGGACGGTCTGCTGCAGAGCGTCAGCGTGCATCAGCGCCAGCGCGACAGTCGCGAGGAGGAAGTGGCCGAGCGCCTGCAGGGACTGGTGCAGCGTGTCGCCGACATGGAGCGCGAGGCGCAGCAGTTTCGCGAACACATCGAGGAGCAGCGGCAGAAGTCCCTGCTCGATCCGCTCACCGGGTTGCCCAACCGGGCGGCCTGGAGCGAGCGCCTGGAGCTGGAAGTGGCTCGCCGCGCGCGCTACGGCGGGGAGCTGCTGCTGGCGGTGCTCGACGTCGACCATTTCAAGCGCATCAACGACGGCTACGGGCACCTGGCCGGCGACCGGGTGCTGAAGATCATCGCCGGCGAACTGCACAAGCGCCTGCGCAAGACCGACTTCATCGCCCGTTTCGGTGGCGAGGAATTCGTGCTGCTGATTCCGGCCACTCCGCTGGAGGGTGGCATGCAGTTGCTGGAAACCCTGCGCGCCGCCATCGAGGCCTGTCCGTTCCACTTCAAGGGCGAGCCGGTGACCATCACCCTCTCCACCGGCCTTGCCGAATTCCGCGACGGCGAGAGCGCCGAGGCGGTATTCGAGCGTGCCGATCAGGCGCTGTACCGGGCCAAGGGCAACGGACGCAATCGCGTCGAACTGGGCTGA MICGLWAGGVYGADTEQQEKLERRWELRLDLLRRGLVRSSLAAEGADKAVDQCMQEMRDILRRDDMDAALGGLIPRLEKAVLDSEQRRQQRAEEATAALAGLVEQLQRLQPPREVRKALKSLGKQLQAAVGQQHQLPALLSQLRNLQGQALTVLQAPAQEQPGLLQRLFGSRGDAAEQAQPAEQAAAAAGETQQIAAELLDSPAAPVPAPAAALSTAAPAAALSTAAPARSSLAPRAALDSLPLPPGLVPQPEDEDSPFSLPTSEPGYSAVAPHIASSLRSLLDELELPARHRPQGEALRLRLEGGLNWYELVPVLDDLAVLVLAVTDSGQREFAGYLKQLNERLEAFLGTLSEAHEGYSASVESARSFNQELRDQVTDLQNRVQEAADLEALKQALEQRLDGLLQSVSVHQRQRDSREEEVAERLQGLVQRVADMEREAQQFREHIEEQRQKSLLDPLTGLPNRAAWSERLELEVARRARYGGELLLAVLDVDHFKRINDGYGHLAGDRVLKIIAGELHKRLRKTDFIARFGGEEFVLLIPATPLEGGMQLLETLRAAIEACPFHFKGEPVTITLSTGLAEFRDGESAEAVFERADQALYRAKGNGRNRVELG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0163 CDS 163250 164761 - uracil-xanthine permease YP_001185669.1 146305204 5106843 TIGRFAM: uracil-xanthine permeasePFAM: Xanthine/uracil/vitamin C permease ; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter Cytoplasmic Membrane[Class 3] TIGR03173|pbuX|xanthine permease|subfamily|3.2e-227||No Data|No Data PF00860|Xan_ur_permease, Permease family|19|399|1e-62 COG2233|UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]. ATGACCTCCACCCCTCAGCGCCCCGAGGACGAGAACCTCGGTATCGGCTCCAATCTTCTCTACGGCCTACAGCACGTACTGACCATGTATGGCGGCATCGTCGCGGTGCCCTTGATCGTCGGTCAGGCGGCCGGCCTGTCGCCTGCGGACATCGGCCTGCTGATCGCCGCCTCGCTTTTCGTCGGCGGCGCGGCCACCCTGCTGCAGACCCTGGGTCTGCCCTTCTTCGGCTGCCAGTTGCCGCTGGTGCAGGGCGTTTCCTTCGCCAGCGTCGCCACCATAGTCGCGATAGTCGGCGCCAATGGTGGCGAAGGCGGCCTGCCGGTGGTGTTCGGCGCGGTGATAGGCGCGGCGCTGATCGGTCTGCTGATCACGCCGGTGTTCTCCAAGATCACCAAGTTCTTCCCCCCGCTGGTGACCGGCATCGTCATCACCACCATCGGCCTGACGCTGATGCCGGTGGCCGCGCGCTGGGCCATGGGCGGCAACAGCGCAGCGGCTGACTTCGGCAGCATGGGCAACATCGGCCTGGCGGCCTTCACCCTGGCCACGGTGCTGCTGCTGAGCAAGGTCGGCAGCGCCACCATCTCGCGTCTGTCGATCCTGCTGGCGATGGTCATCGGCACCCTGGTGGCGCTGGCCTTCGGCATGGCCGACTTCTCCCGGGTCGGCGAAGGCCCGGTGCTGGCCTTCCCGGCGCCGCTGCACTTCGGCATGCCGGTATTCGAGGTGGCGGCGATCGTCTCGATGCTGATCGTGGTGATGGTGATCCTGGTGGAAACCTCGGCCGACATCCTCGCGGTGGGCGACATCATCGATACCAAGGTGGACTCCAAACGCCTCGGCAACGGCCTGCGCGCCGACATGATCGCCAGCATGGTGGCGCCGCTGTTCGGCTCCTTCACCCAGAGCGCCTTCGCCCAGAACGTCGGCCTGGTGGCCGTGACCGGGGTGAAAAGCCGCTACGTGGTGGCAACCGGCGGCCTGATTCTGGTCACCCTCGGCCTGCTGCCGATCATGGGCCGGGTCATCGCCGCGGTGCCGACCTCGGTGCTGGGCGGCGCGGGTATCGTGCTGTTCGGCACGGTCGCTGCCAGCGGTATCCGTACCCTGGCCAAGGTCGACTACCGCAACAACATGAACCTGGTGATAGTCGCCACCTCGGTCGGTTTCGGCATGATCCCCATCGCCATGCCGAGCTTTTACCATCACTTTCCGGACTGGTTCGAGACCATCTTCCACTCCGGCATCAGCTCGGCGGCGATCATGGCGATCCTGCTCAACCTGCTGTTCAACCATTTCACCGCGGGCAATTCCGACCAGCAGTCGGTGTTCGTCGCCGGTACCGAGCGCAGCCTGCGCTATCGCGACATCGCCGCCCTGCATGAGGGCGACCATTTCATCGGCGGCAAGCTGTATGACGCACAGGGCAACGAGGTGCCGCTGCAGGACGAGGAAGAGGCCCACGGCAAGACGCAGACCAGACGGCAGGCAGCCTTGGCCGACCACTGA MTSTPQRPEDENLGIGSNLLYGLQHVLTMYGGIVAVPLIVGQAAGLSPADIGLLIAASLFVGGAATLLQTLGLPFFGCQLPLVQGVSFASVATIVAIVGANGGEGGLPVVFGAVIGAALIGLLITPVFSKITKFFPPLVTGIVITTIGLTLMPVAARWAMGGNSAAADFGSMGNIGLAAFTLATVLLLSKVGSATISRLSILLAMVIGTLVALAFGMADFSRVGEGPVLAFPAPLHFGMPVFEVAAIVSMLIVVMVILVETSADILAVGDIIDTKVDSKRLGNGLRADMIASMVAPLFGSFTQSAFAQNVGLVAVTGVKSRYVVATGGLILVTLGLLPIMGRVIAAVPTSVLGGAGIVLFGTVAASGIRTLAKVDYRNNMNLVIVATSVGFGMIPIAMPSFYHHFPDWFETIFHSGISSAAIMAILLNLLFNHFTAGNSDQQSVFVAGTERSLRYRDIAALHEGDHFIGGKLYDAQGNEVPLQDEEEAHGKTQTRRQAALADH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0164 CDS 164992 165582 + multiple antibiotic resistance (MarC)-related protein YP_001185670.1 146305205 5106844 PFAM: multiple antibiotic resistance (MarC)-related protein Cytoplasmic Membrane[Class 3] TIGR00427|TIGR00427|conserved hypothetical protein TIGR00427|hypoth_equivalog|1.2e-08||Hypothetical proteins|Conserved PF01914|MarC, MarC family integral membrane protein|3|193|3e-30 COG2095|MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion]. ATGGACATCTTCAGCATCGCCGTGCTGATCTTTTTGGTCACCGACCCTTTCGGCAACATCGCCATCTATATCGCCGCGCTGAAGAACGTCGCGCCGCGCCGACGCCTGTGGATCGCCGCGCGCGAGCTGCTGTTCGCCCTCGGCCTGCTGCTGCTGTTCCTCACCTTTGGTGACAAATTCCTCTCCAGCCTCGGGCTGTCGCGCGAGGCAACCGCCATTGCCGGCGGTATCATCCTGTTCGTCATCGCCATGCGCCTGATCTTTCCCAGCCCGCAGGGCCTGCTCGGCGACGTGCCGGATGGCGAGCCGATGCTGGTGCCGCTGGCCACGCCGGCGGTGGCCGGGCCCTCGGCCCTGGCAGTGCTGATGACCCTGCGCAACACCCACACCGGGCCGCTCTGGGAGCTTTACCTGGCGGTCATCCTGGCGTGGGCGGCGACGGCATTCATCCTGCTGCAGGCGTCGTTCCTGCAGCGTTTTCTCGGTAATCGCGGGTTGATGGCGGTGGAACGACTGATGGGCATGCTGCTGATCATGCTCAGCGTCGACATGCTGCTGGACAACCTGCAGAGCGTATTCGGTCACGCATGA MDIFSIAVLIFLVTDPFGNIAIYIAALKNVAPRRRLWIAARELLFALGLLLLFLTFGDKFLSSLGLSREATAIAGGIILFVIAMRLIFPSPQGLLGDVPDGEPMLVPLATPAVAGPSALAVLMTLRNTHTGPLWELYLAVILAWAATAFILLQASFLQRFLGNRGLMAVERLMGMLLIMLSVDMLLDNLQSVFGHA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0165 CDS 165579 166361 + N-acetylmuramoyl-L-alanine amidase YP_001185671.1 146305206 5106845 PFAM: Peptidoglycan-binding domain 1 protein ; PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase, family 2 Cytoplasmic[Class 3] PF01471|PG_binding_1, Putative peptidoglycan binding domain|197|251|5e-05 ; PF01510|Amidase_2, N-acetylmuramoyl-L-alanine amidase|28|176|4e-22 COG3023|AmpD, Negative regulator of beta-lactamase expression [Defense mechanisms]. ATGAAGTCTTTCAGCCTTGCCCTGCTTCTTGTCCTGCTCGCCGGTTGCACCGGCGGGCTGCGCATCGACGACAGCCACACCGCAACGGGGCAGAACAGCCGCGTGCAGTACGTGGTGCTGCACTACACCTCGGCCGATCTGCAGCGTTCGCTGAATCTGCTGACGCAGACCGAGGTGAGCAGCCATTACCTGATCGGCGACGCGCCGCCGACCGTCTACCGTCTGGTGGACGAGAACCGCCGCGCCTGGCACGTCGGCGTCAGCGAGTGGCAGGGGCGGACCTGGCTCAACGCGTCGACCATCGGCATCGAGCTGGTCAACCAGGGGTACTACGAGACCCCGGCCGGTCGTTACTGGCAGCCGTTCGCCCCGCAACAGATCGACACCCTGATCGTGCTGCTTAAGGACATCGTGCAGCGCCACCAGCTGCCGCTGGGCTCGATCATCGCCCACAGCGACGTGGCGCCGCAGCGCAAGGTCGATCCGGGGCCGCTGTTCCCCTGGAAGCGGCTGGCTGACGAAGGCCTGGTGCCCTGGCCGGACGAGGCGCGGGTGGCGCGGCAGCAGGCGCTGTTCGCCATCAGCCTGCCCGGCATCGAGTGGTTCCAGGAGCAGCTGGCGCAGCAGGGCTATACCGTGCCCCGGCATGGCGAGCTGGACGAAGCCACGCGCAATGTCATTGCCGCCTTCCAGATGAAGTACCGCCCGGCCAACTACGATGGCCAACCGGACGCCGAAACCGCAGCGCGGCTGCTGGTGCTCAACCAGCAGGCGGCGGGTTAG MKSFSLALLLVLLAGCTGGLRIDDSHTATGQNSRVQYVVLHYTSADLQRSLNLLTQTEVSSHYLIGDAPPTVYRLVDENRRAWHVGVSEWQGRTWLNASTIGIELVNQGYYETPAGRYWQPFAPQQIDTLIVLLKDIVQRHQLPLGSIIAHSDVAPQRKVDPGPLFPWKRLADEGLVPWPDEARVARQQALFAISLPGIEWFQEQLAQQGYTVPRHGELDEATRNVIAAFQMKYRPANYDGQPDAETAARLLVLNQQAAG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0166 CDS 166365 166769 - hypothetical protein YP_001185672.1 146305207 5106846 Unknown[Class 3] ATGCCCAGCATCGATCCCAGCCGAGCGGATCTGGCCGAATTCGCCACGCGCATGCCAAGCGACACGCCGATCCTGATGCTCAACCTGTTGCGCTTCAACGACCAGGCCGCGTATCCCGCCGACAGCGCACATGCGCCCTGCAGTGGCCGTGACGCCTACGCCCGCTACAGCCGCACGGCACTGAGCAAGGTACGCGGCGTGGGTGGCGAGGTGCAGCTGCTGGCCAATGCCCACATGGCCCTGATCGCACCGGCCGGGGAGCACTGGGACCAGCTCGTGCTGGTGCGCTATCCCTCGACCGCAGCCTTTCTGAGCATGCTGGCCGACCCCGAATACCAGGCCGCCACCGTGCACCGCAGCGCGGCGCTGGCCGATTCGCGCCTGATCGGCACGACGCCTGCCTGA MPSIDPSRADLAEFATRMPSDTPILMLNLLRFNDQAAYPADSAHAPCSGRDAYARYSRTALSKVRGVGGEVQLLANAHMALIAPAGEHWDQLVLVRYPSTAAFLSMLADPEYQAATVHRSAALADSRLIGTTPA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0167 CDS 166883 167545 - hypothetical protein YP_001185673.1 146305208 5106847 Unknown[Class 3] ATGCGCCGTGCCAACCCGCTTTGCCTTCTGTTTGCTGGCTTGCTGCTGAGCGGTTGCGCCAGCCAGACCACCAGCCCCACGCAGTTTTCGGGCTACCTCGCCGATTATTCGCAGCTCCAGCCGGCCACCTCGGCCACCGGCGCGCCCGTGCTGCGCTGGATCTCGCCGCAGTTCAAGGCCGAAAGCTACAGCGCGGTGTACATCGAGAAACCCACCTTCCATCCCCAGCCCGTACCCAACGAGCAGATCAGCGCACAAACCCTGGAGGAGGTGCGCAATTACCTGCATCAGGCGTTGATACGCGAAGTGCAGGGGCGCATGAAGGTGCTCAGCGAACCGACCATGGACAGCCTGGTATTGCGCAGCGCCATCACCGGCGTGACAGTGACCACCGAAGGGCTCAAGGCCTACGAGGTGATCCCCGTCGCCCTGGTCGTGGCGGCCGCGACAACCGCCGCGGGCACCCGCGACCGCGACAGCGAGATCTTCATCGAACTGGAGGCGCTGGACGCCCGCAACAGCGAGCCGATGGTCCGGGTGGTGCGCAAGGGCCATGGCCTGACGCTGGAAAACAGCAGCACCCAGCTCACGCTGGATGACCTTAAGCCGGTGCTCGACAGCTGGGCACGGGACGCGCGGGACTTCCACCCAGGGCTGCGCTGA MRRANPLCLLFAGLLLSGCASQTTSPTQFSGYLADYSQLQPATSATGAPVLRWISPQFKAESYSAVYIEKPTFHPQPVPNEQISAQTLEEVRNYLHQALIREVQGRMKVLSEPTMDSLVLRSAITGVTVTTEGLKAYEVIPVALVVAAATTAAGTRDRDSEIFIELEALDARNSEPMVRVVRKGHGLTLENSSTQLTLDDLKPVLDSWARDARDFHPGLR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0168 CDS 167580 167987 - response regulator receiver protein YP_001185674.1 146305209 5106848 PFAM: response regulator receiver Cytoplasmic Membrane[Class 3] PF00072|Response_reg, Response regulator receiver domain|12|126|1e-15 COG2204|AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]. ATGACCGAAACCGGCTCCGCCATCGTCAAGACCATCGTACTGGTCGAGGACGACGACGTCGTTCGCCAGCTCACTGCACAGGTGCTCGAAGAATTCGGCTATCGCGTGCAGGCCCTGCGCGACGGCAGCAGCGCACTGGCACTTTTGCAGAGCGATCAGCCCTGCGATCTGCTGATGAGCGACATCGGCCTGCCCGACATGGACGGGCGTGCGCTGGTCGAGGCTGCGCGCAAGCTGCGCCCCACCCTGCCGGTGCTGTTCGCCAGTGGCTACAACGAGCGCGAGCTGCTCGACGAGGTGCGCGCACGCGATACGGCCGCCGCCACCGACAGCATCGTCAAACCCTACGATCTCACGGTGCTCGCCCGCCGCCTGGAGGAACTGGCGAACAAGCGGAGCGGCATCTAG MTETGSAIVKTIVLVEDDDVVRQLTAQVLEEFGYRVQALRDGSSALALLQSDQPCDLLMSDIGLPDMDGRALVEAARKLRPTLPVLFASGYNERELLDEVRARDTAAATDSIVKPYDLTVLARRLEELANKRSGI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0169 CDS 168101 171607 + multi-sensor hybrid histidine kinase YP_001185675.1 146305210 5106849 PFAM: response regulator receiver ; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein Cytoplasmic Membrane[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006796|phosphate metabolic process|IEA ; biological_process|GO:0006817|phosphate transport|IEA ; molecular_function|GO:0000155|two-component sensor activity|IEA TIGR02966|phoR_proteo|phosphate regulon sensor kinase PhoR|equivalog|1.6e-13|2.7.3.-|Signal transduction|Two-component systems PF00769|ERM, Ezrin/radixin/moesin family|396|490|9e-06 ; PF03938|OmpH, Outer membrane protein (OmpH-like)|386|497|3e-06 ; PF02463|SMC_N, RecF/RecN/SMC N terminal domain|375|506|3e-07 ; PF00512|HisKA, His Kinase A (phosphoacceptor) domain|498|565|4e-12 ; PF01590|GAF, GAF domain|260|391|2e-07 ; PF05227|CHASE3, CHASE3 domain|49|183|2e-22 ; PF00072|Response_reg, Response regulator receiver domain|1046|1159|1e-26 ; PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|612|723|6e-26 ; PF05622|HOOK, HOOK protein|413|492|9e-05 COG0642|BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]. ATGGACGTCCCAGTGTCGAACGAGTCCGCAATGGACGAAAAGAGCTTTCGCCGCATTCTCAACCGTAACGTCGGCCTGCCGCTTGGTCTGGGCCTGGTCAGCGCCCTGTTCTTCGCGGTGCTGATCGGCTACCTGCTCAACGTGATCCGCTGGGTCGAGCACACCGATCAGGTGCTCAACCGGGCCAGCGAGGTGTACAAGCTGACGCTCGACCTGGAGACCGGCATGCGCGGCTTCCTGCTCAGCGGCCGCGAGGACTATCTGGCGCCTTACGAGCTGGCCCGCGGCAAGTACCGCCCATTGGTCGAGCAGATGATCACCATGGTCAAGGACAATCCGCCCCAGGCGCAGCGCCTCGAGCGTCTGCTGGCCATGCAGGCGCAGTGGGATGCCTTCGCCCAGGAGGTGATCGCCAGCCGTCGCAACGGCCGCGATATTCTCGAAGAGGTGGGCAGCGGCCGCGGCAAGAACCTCACCGATGGCATGCGTGGAGAGCTGGATGCCTTCATCAGCAGCGAGCGCGACCTGCGCCGGCACCGCAATGCCCAGGTCAGCAGCGCCACCACCTGGGGCGCCGGCATCTATCTGGTGGTCAGCATCCTGTTCAGCGCCCTGCTGGCTCTGTTCGGCCGGCGCGAGCTGCTGAACCTTTCGCACACCTATTCCGCGGCGCTGGGCAAGCAGGCCGAATACGCCGAGGAGCAGCATCAGCGGGCCTGGCTGCGCGGCGGGCAGACGCAACTGTCGGAGCGCCTGCTGGGCCAGCCGCAGGTCAACGAGCTGGCCGAGCGCTCGCTGGCATTCCTCGCCGAATACCTCGACTGCGTGGTCGCCGCGCTGTACCAGCGCGATGCCCGCAGCGGCGACCTGCGGCGTATCGCAGGCTATGGTTTCAGCGAGGGCGAGGCTCTCAGGGACGAGTTCTACCGCGGCGAGGGCCTGGTCGGGCAGGCCGCCCAGCGGCGCCGCCTGGTGTGTCTGGACAACCTGCCCGCAGACTACATCAAGGTCACCTCGGGCCTGGGCGATGGCCAGCCCGTGAGTGTCGCCCTGGTGCCGCTGCAGTCGGAGGATCGCGTCAACGGCGTGCTCGAACTGGCATTCATGCGCGTGCTCGAGCCTCGCGAGCGCGAGTTTCTCGAATCCATTTCCGCCAGCGTCGGCACTGCGCTGGAAGCATCGCTCTATCGCCAGCGCCTGCAGGAGGTGCTGGCCGACACCCAGCAGCTCAACGAGGAGCTGCAGACCCAGCAGGAAGAACTGCGCGCCGCCAACGAGGAGCTGGAGCAGCAGGCCCGCGTGCTCAAGGAGTCCCAGGCCCACCTGGAGACCCAGCAGGCCGAGCTGGAACAGACCAACGAGAAGCTCTCCGAGCAGGCGCAGACGCTGGCCGACCAGCGCGACGAGCTGGACCAGCGCAACACCGCCCTTGGTCGCATCCAGGCGCAACTGGAAGAGCGCGCCGAGGAGCTGCAGCGCGCCAGCCGCTACAAGTCCGAGTTCCTCGCCAACATGAGTCACGAGCTGCGCACGCCGCTGAACAGCTCGCTGATCCTGGCCAAGCTGCTGGCGGAAAACGCCCGGGGCAACCTCGACGAGGAGCAGGTCAAGTTCGCCGAGTCCATCTACTCGGCCGGTAACGACCTGCTCAACCTGATCAACGACATTCTCGACATCGCCAAGGTCGAGGCGGGCAAGCTCGAGGTGCGCCCCGAGCGCACGCCGCTGGCCGGCATGCTCGAGAGCCTGAGCGACGTGTTCGAGCCGCTGGCACGCGAGCGCGGCCTGAGCTTCGAAATCGAGCGCCAGGCAGAGCTGCCGCAGACGCTATTCACCGATCGCCAGCGTGCCGAGCAGATCCTGCGCAATCTGCTGTCCAACGCCTTCAAGTTCACCGACCGCGGTGGCGTGACCCTGCGCGTGTCGCGCCACGACGAGCAGACCCTGGCGTTTGCCGTGAGCGACAGCGGTATCGGCATCGCCCCGGATCAGCAGGCGGTGATCTTCGAGGCCTTCCGCCAGGCCGACGGCACCACCAACCGCCGTTACGGCGGTACCGGCCTGGGGCTGTCCATCTCGCGCGATCTGGCCGGCCTGCTCGGCGGCTCCATCGGCGTCAGCAGCGTGCCCGGCGAGGGCAGCACCTTCACCCTGCTGCTGCCTGAGCGGCTGCTGGACCACGGCGCGCCTGCCCGGCCGCTGCCCGCTGCCCCGGTTTCGCCGCCGGCAGTGGTCGCTTCCGTCCCGGCGGCGCCGCTGCCTGCCGCACCGCGCGCGCCAGCGCCCTTCGCCGACGACCGCGAGCGCCTGGGTGAACGCGGCGGCCGCCGCGTGCTGGTGGTGGAGGACGAGGTGCGCTTCGCCCGCATCCTCTTCGATCTGGCTCACGAACTGGGTTACGCCTGCCTGGTGGCCACCAGTGCCGACGAGGGGCTGGAGCTGGCTCGTCAGTACCGTCCGGACGCCATTCTGCTGGACATGCGCCTGCCCGACGATTCCGGGCTCGGCGTGCTGCAGCGCCTGAAGGACGATGCGCAGACCCGTCACATCCCGGTTCATGTGGTCTCGGTGGAGGACCACAGCGAGGCGGCCCTGCACCTGGGCGCCGTGGGCTATGCGCTCAAACCCACCAGCCGCGACCAGCTCAAGGAGGTGTTCGGCAAGCTGGAGGCCAAGCTCAATCAGCAGGTCAAGCGCGTGTTGCTGGTCGAGGACGACCCGCTGCAGCGCAACAGCATCGCCCGTCTGATCGGCGACGAGGACATCGAGATCAGCGCTGTGGCCCTGGCCGGCGAAGCGCTGGAGAAGCTGCGCGACACGGTGTTCGACTGCATGATCATCGACCTCAAGTTGCCCGACATGCTCGGCAACGAGCTGCTGCGGCGCATGGCCGAGGAGGACATCTGCTCCTTCCCGCCGGTGATCGTCTACACCGGGCGCAACCTCACCCGCGAAGAAGAGGCCGAGCTGCTGCGCTATTCGCGCTCGATCATCATCAAGGGCGCGCGCTCGCCGGAGCGTCTGCTGGACGAAGTCACCCTGTTCCTGCACAAGGTCGAGTCGTCGCTGTCCAGCGAGCATCAGCGCATGCTCAAGACCGCGCGCAGCCGGGAAAAACTGTTCGAAGGGCGCCGCCTGCTGCTGGTGGATGACGACGTACGCAACATCTTCGCCCTGTCCAGTGCGCTGGAACAGAAGGGGGCGGCGGTGGAGGTGGCCCGCAACGGTTTCGAGGCGCTGGCCAAACTGGACGAGCACGACGACATCGATCTGGTGCTGATGGACGTGATGATGCCGGAGATGGACGGTTATGAGGCCACCCGCAAGATTCGCCAGCAGCCGCGCTGGAACAACCTGCCGATCATCGCGGTGACGGCCAAGGCGATGAAGGACGACCAGGAGCGCTGCCGCGAGTCCGGCGCCAACGACTACCTGGCCAAGCCCATCGACCTGGATCGCCTGTTCTCCCTGATCCGCGTGTGGATGCCCAAGCTGGAGCGCCTCTGA MDVPVSNESAMDEKSFRRILNRNVGLPLGLGLVSALFFAVLIGYLLNVIRWVEHTDQVLNRASEVYKLTLDLETGMRGFLLSGREDYLAPYELARGKYRPLVEQMITMVKDNPPQAQRLERLLAMQAQWDAFAQEVIASRRNGRDILEEVGSGRGKNLTDGMRGELDAFISSERDLRRHRNAQVSSATTWGAGIYLVVSILFSALLALFGRRELLNLSHTYSAALGKQAEYAEEQHQRAWLRGGQTQLSERLLGQPQVNELAERSLAFLAEYLDCVVAALYQRDARSGDLRRIAGYGFSEGEALRDEFYRGEGLVGQAAQRRRLVCLDNLPADYIKVTSGLGDGQPVSVALVPLQSEDRVNGVLELAFMRVLEPREREFLESISASVGTALEASLYRQRLQEVLADTQQLNEELQTQQEELRAANEELEQQARVLKESQAHLETQQAELEQTNEKLSEQAQTLADQRDELDQRNTALGRIQAQLEERAEELQRASRYKSEFLANMSHELRTPLNSSLILAKLLAENARGNLDEEQVKFAESIYSAGNDLLNLINDILDIAKVEAGKLEVRPERTPLAGMLESLSDVFEPLARERGLSFEIERQAELPQTLFTDRQRAEQILRNLLSNAFKFTDRGGVTLRVSRHDEQTLAFAVSDSGIGIAPDQQAVIFEAFRQADGTTNRRYGGTGLGLSISRDLAGLLGGSIGVSSVPGEGSTFTLLLPERLLDHGAPARPLPAAPVSPPAVVASVPAAPLPAAPRAPAPFADDRERLGERGGRRVLVVEDEVRFARILFDLAHELGYACLVATSADEGLELARQYRPDAILLDMRLPDDSGLGVLQRLKDDAQTRHIPVHVVSVEDHSEAALHLGAVGYALKPTSRDQLKEVFGKLEAKLNQQVKRVLLVEDDPLQRNSIARLIGDEDIEISAVALAGEALEKLRDTVFDCMIIDLKLPDMLGNELLRRMAEEDICSFPPVIVYTGRNLTREEEAELLRYSRSIIIKGARSPERLLDEVTLFLHKVESSLSSEHQRMLKTARSREKLFEGRRLLLVDDDVRNIFALSSALEQKGAAVEVARNGFEALAKLDEHDDIDLVLMDVMMPEMDGYEATRKIRQQPRWNNLPIIAVTAKAMKDDQERCRESGANDYLAKPIDLDRLFSLIRVWMPKLERL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0170 CDS 171607 172416 + MCP methyltransferase, CheR-type YP_001185676.1 146305211 5106850 PFAM: MCP methyltransferase, CheR-type Two-component system [KEGG] ; Bacterial chemotaxis [KEGG] Cytoplasmic[Class 3] PF03705|CheR_N, CheR methyltransferase, all-alpha domain|3|58|5e-06 ; PF01739|CheR, CheR methyltransferase, SAM binding domain|70|248|8e-30 COG1352|CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]. ATGCCTGACGAGATCGAGCTGCGCCTGCTGATCGAAGCGATCTACCTGCGCTACAGCTACGACTTTCGCGACTACTCCAAGGCATCGCTCAAGCGCCGCGTGCGGCAGGCGCAGGTGCAGCTGGACTGCCCGACCATCTCGGCCCTGCAGGAGCGCATCCTGCACGAGCCGCAGGTGTTCATGCAGCTGCTGCAGTACCTCACCATCCCGGTCAGCGAAATGTTCCGCGACCCCGGCTACTTCCTGGCGCTGCGCCAGCAGGTGGTGCCGCTGCTGCACACCTATCCTTCCCTGAAGGTCTGGGTGGCCGGCTGCAGCACCGGCGAAGAGGTGTATTCCCTGGCTATCCTGCTGCGTGAGGAAGGCCTGCTGGAGCGCACCATGATCTATGCCACGGACATCAACCCGCATTCGCTGGAGAAGGCCGAGCAGGGCATCTTCGCCCTCGACAACCTGCGCACCTACACCCAGAACTACCAGCTATCCGGCGGCAAGCGGGCCTTCTCCGACTACTACTCGGCGGCCTACGACCGGGTGCTGTTCGACAAGTCGCTGCGGGCCAACGTGACCTTCGCCGACCACAGCCTGGCCACCGACAGCGTGTTTGCCGAGACCCACCTGGTGTCCTGCCGCAACGTGCTGATCTATTTCAACCGTGACCTGCAGGACCGTGCCCTCGGGCTGTTTCACGACTCGCTGTGCCATCGTGGCTTCCTCGGCCTGGGCAGCAAGGAAAGCCTGGACTTCTCCGCCTATGCCAACCAGTTCGAGGCGTTGGCGCGGCCCGAGCGGATCTTTCGCAAGCGATGA MPDEIELRLLIEAIYLRYSYDFRDYSKASLKRRVRQAQVQLDCPTISALQERILHEPQVFMQLLQYLTIPVSEMFRDPGYFLALRQQVVPLLHTYPSLKVWVAGCSTGEEVYSLAILLREEGLLERTMIYATDINPHSLEKAEQGIFALDNLRTYTQNYQLSGGKRAFSDYYSAAYDRVLFDKSLRANVTFADHSLATDSVFAETHLVSCRNVLIYFNRDLQDRALGLFHDSLCHRGFLGLGSKESLDFSAYANQFEALARPERIFRKR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0171 CDS 172413 173024 + CheB methylesterase YP_001185677.1 146305212 5106851 PFAM: CheB methylesterase Two-component system [KEGG] ; Bacterial chemotaxis [KEGG] 3.1.1.61 Cytoplasmic[Class 3] PF01339|CheB_methylest, CheB methylesterase|19|188|1e-30 COG2201|CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]. ATGAACGAGCAGAGGATCATGCTGCGTGGCCGCCCCCGCGTGCCCCTGCAGGCACTGCTGCTGGGCGCCTCCGCCGGCGGCGTGGAGGCGCTGCTGCAGCTGCTCGTCGATCTGCCGCCGAGCTACCGCCTGCCGGTGGTGTGCCTGCTGCATCAGCCCGATCGCAACGACAGCCTGCTCGCCGACCTGTTCGCTCGGCGCCTGCAGCTGCCGGTCAAGGAGGCTGCGGACAAGGAATACCTGCGCGGCGGCGTGGTCTACGTGGCGCCGGCCGGCTATCACCTGTCCATCGAGGCGGACCGCAGCTTTTCCCTCAGTCGCGAGGAGCCGCGGCATTTCTCGCGGCCGTCGATCGACATTCTGTTCGAGTCCGCTGCCGACGCCTACGGTGCGCGGCTGGCTGCCGCCCTGCTCACCGGAGCCAACGAGGACGGCGCGGCCGGCCTGCTGGCGATCCAGCGGGCCGGCGGCCTGACCCTGGTACAGGACCCCGCCGACGCCCAGGTCCCGACCATGCCGGAGGCGGCGCTGGCGCTGCTGCAACCGGATTTTCTCCTGCCCCTCACCGCCATGCGACTGCTGCTGGCCGAACTGGATGCCCCGCCATGCTAA MNEQRIMLRGRPRVPLQALLLGASAGGVEALLQLLVDLPPSYRLPVVCLLHQPDRNDSLLADLFARRLQLPVKEAADKEYLRGGVVYVAPAGYHLSIEADRSFSLSREEPRHFSRPSIDILFESAADAYGARLAAALLTGANEDGAAGLLAIQRAGGLTLVQDPADAQVPTMPEAALALLQPDFLLPLTAMRLLLAELDAPPC Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0172 CDS 173018 174205 + response regulator receiver sensor signal transduction histidine kinase YP_001185678.1 146305213 5106852 PFAM: response regulator receiver ; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein Cytoplasmic Membrane[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006796|phosphate metabolic process|IEA ; biological_process|GO:0006817|phosphate transport|IEA ; molecular_function|GO:0000155|two-component sensor activity|IEA TIGR02966|phoR_proteo|phosphate regulon sensor kinase PhoR|equivalog|2.3e-12|2.7.3.-|Signal transduction|Two-component systems PF00512|HisKA, His Kinase A (phosphoacceptor) domain|168|241|2e-07 ; PF00072|Response_reg, Response regulator receiver domain|9|121|3e-19 ; PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|286|394|1e-21 COG0642|BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]. ATGCTAAGGAAGATTGAAGCCAAGGTGCTGATCGTCGACGACCTGCCGGAGAACCTGCTGGCCCTGCGCTCGCTGATCCAGAGCGACGATCGCACGCTGTTCCAGGCCAGCAGCGCCGACGAGGCGCTGTCGCTGATGCTCGAGCATGAGTTCGCCCTGGCCATCCTCGATGTGAAGATGCCGGGCATGAATGGTTTCGAACTGGCCGAGCTGATGCGCGGAACGGAGAAGACCCGGCATATCCCGATCATCTTCGTCAGCGCCGTCGGCCGCGACATGGACTATGCCTTCAAGGGCTACGAGAGCGGCGCCGTGGATTTCCTGCACAAGCCGCTGTCGCCCTTCGAGGTGCGCAGCAAGGTGTCGATGTTCGTCGAGCTGTACCGTCACCGCAAGGCGCTGAGCCAGCAGCTGGAAGTGCTCGAGGCCGCGCGGCGCGAACAGGAGGCCCTGCTCACCGAGCTGCGCGAGACCCAGGCCGAGTTGCAGAAGGCGGTGCAGATGCGCGACTCGTTCATGTCCATCGCCTCCCACGAGCTGCGTACCCCGCTCAATGGCCTGATCCTCGACGTGCAGCTGCGCAAGCTGCGCCTGGAGCAGGGCCGCACGGATGCCTTCACCCCGGACAAGCTGCACGAGATGATCGCCCGCGACGAGCGACAGATCCGCAGCCTGAGCCGCCTGATCGACGACATGCTGGACGTGTCGCGCATTCGCACCGGCAAGCTTTCGGTGATACCCCAGCCGGGAGACCTCGGCGTACTGGCCGGCAACGTCGTGGAGGGTCTGGCCGCGCAGTTCGCCAGTCAGGGCAACCACATCGACCTGCAGGTGGACGGCCCCGCGCCGGTGATGATGGACGAGTTCCGCATCGAGCAGGTGCTGGCCAACCTGCTGACCAACGCCCTGCGCTACGGAGGCGGCAAGCCCGTGCTGGTGCGGGTCAGCAGCGAGGGCGAGATCGTCCGCGCCGAGGTGCGCGACCAGGGCATGGGCATTTCCGAAGCGGACCAGCGACGGGTGTTCGAGCAGTTCGAGCGGGTCTGCGACGCCGGTGTCGCCCAGGGGCTCGGGCTCGGCCTGTTCATCAGCGAGCAAATCGTGCAGGCCCACGGAGGGCGCATCGAACTGAGCAGCCGCCTGGGTGAGGGCTCCTGCTTCAGCGTCCTGCTACCGCGCCGCGTCTGA MLRKIEAKVLIVDDLPENLLALRSLIQSDDRTLFQASSADEALSLMLEHEFALAILDVKMPGMNGFELAELMRGTEKTRHIPIIFVSAVGRDMDYAFKGYESGAVDFLHKPLSPFEVRSKVSMFVELYRHRKALSQQLEVLEAARREQEALLTELRETQAELQKAVQMRDSFMSIASHELRTPLNGLILDVQLRKLRLEQGRTDAFTPDKLHEMIARDERQIRSLSRLIDDMLDVSRIRTGKLSVIPQPGDLGVLAGNVVEGLAAQFASQGNHIDLQVDGPAPVMMDEFRIEQVLANLLTNALRYGGGKPVLVRVSSEGEIVRAEVRDQGMGISEADQRRVFEQFERVCDAGVAQGLGLGLFISEQIVQAHGGRIELSSRLGEGSCFSVLLPRRV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0173 CDS 174381 174668 + hypothetical protein YP_001185679.1 146305214 5106853 Unknown[Class 3] ATGTACCTCGTCCGACTGAGCCTGTTCTGCGTCGCTACATTGCTGGTCAACGGGGCTTACGCCAACGATTTCATCGGTTCGGCCGGCGCCAGTGCCAGGACCGCCGACCTTACCGTTTCCAATGCTCAGTCACGCGAATCCGCTTCTGCCAAGCAGCGCGAGTTGAGTCAATCCAGCGGCTCCCGCCGTGCCCAGGACGATGCCCAGTGGCTGCGCATCTCCGACGAGACCGATACCGCCAACCGCGAACCGCGTCCTGCCGTCAGCACGCCGCGCTGGGTGTTCTGA MYLVRLSLFCVATLLVNGAYANDFIGSAGASARTADLTVSNAQSRESASAKQRELSQSSGSRRAQDDAQWLRISDETDTANREPRPAVSTPRWVF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0174 CDS 174687 174872 + hypothetical protein YP_001185680.1 146305215 5106854 Cytoplasmic Membrane[Class 3] ATGTCCCGAAGTGCCGTCATCCTGCTGATCATGACGCTCCTGAGCCTGGCCAGCCTCTGGCTGATGCCCGGCCTGGGAGAGCCGGTCAGCCTGCTGCTCAAGGGCGCCGCTGCCGTCTTCGGTCTCGGCTTCCTGCTGGCGTTGATGCTGGGTCGCCGCTTCAAGTTCGACCCCGTGCTGCGCTGA MSRSAVILLIMTLLSLASLWLMPGLGEPVSLLLKGAAAVFGLGFLLALMLGRRFKFDPVLR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0175 CDS 174898 176694 - alginate biosynthesis sensor protein KinB YP_001185681.1 146305216 5106855 TIGRFAM: PAS sensor proteinPFAM: ATP-binding region, ATPase domain protein domain protein ; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein Two-component system [KEGG] 2.7.3.- Cytoplasmic Membrane[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006796|phosphate metabolic process|IEA ; biological_process|GO:0006817|phosphate transport|IEA ; molecular_function|GO:0000155|two-component sensor activity|IEA TIGR02966|phoR_proteo|phosphate regulon sensor kinase PhoR|equivalog|7.1e-20|2.7.3.-|Signal transduction|Two-component systems PF00672|HAMP, HAMP domain|178|247|4e-07 ; PF00512|HisKA, His Kinase A (phosphoacceptor) domain|379|446|5e-09 ; PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|493|598|1e-24 ; PF08448|PAS_4, PAS fold|267|374|7e-09 COG5002|VicK, Signal transduction histidine kinase [Signal transduction mechanisms]. ATGAAGCTGTCGATGAAGCTTCGCACGCGTCTGTTCCTCAGCATTTCCGCGCTGATCACCGTGGCGCTGCTGGGGCTGCTGCTCGGGCTGTTCAGCGTCACGCAGATGTCCCGCAGCCAGAGCGACCTGATCCAGCGCGGCTTTACCGCCGTGCAGATCGGCCAGAAGCTGCGCCAGCACCTGGGCGACGAGCTGATCCTGCTGATCGGCCAGACACCGAACCCGGAGGCCCTGGAAAACATCCGTCAGGCCTTTCGCAGCACCCTGGCCGAAGGCTTCAGCGCCAAACTGGGCGCGGACTACGTGCAGGGCCTCGAGCAGGCCGCGATCCTGCATCGCCAGATGGAACAGGTGGCTGAAAGTGCCACTCCTGCCGGCCAGTCGCCGCACAACCTGGCTGGCAACATCCCCTTTACCGAAGCCTTCCAGAAGCTGCGCAACCACCTGCTGGATCAGCAGGACCGGGTCGTCAGCTGGGTCATCGCCGCCGAGCACAAGGCCGGCGAGCGCTCCCGGCTGATCGCCGGCCTGCTGGTGATGACGGGCCTGGCCGTGCTGGCGATCGGCGTCATCACCGCCAACGGCATCGCCCGCCGTTTCGGCGCCCCCATCGATCTGCTGGCGCGCGCCGCGGACCAGATCGGCAAAGGCCAGTACGACGTGGTATTGCCGGTGTCACCGGTGGTGGAGCTGGCCGTGTTGAGCCGCCGCTTCGGCCTGATGACCGAGGCCTTGCGCCAGTACCATTCGAGCAATCTCACGCAGCTGCTCAACAGCGAAGGCCGTCTGAAGGCGGTGCTCGACAGCATCGACGACGGCCTGGTGATCCTCGATGCCCTGGGCCGTGTCGAGCATGCCAATCCCGTGGCCCTGAGCCAGCTGTCGTGGAAGCAGGACATACAGGATCAGCCCATCGGCCCGCTGCTGCCCGGCCATGCCGTGGACGAGGCATTGCGCCAGGTGCTGGCCGGCGAGCCGATGCGCGAGCCACCGGCAGACCTGCAGATCGACCGCAACGGCGAGGTTCGTCTGCTGGCTTGGGCCCTGACCCCGGTACAGGTTCGCGAAGGCGGCAGTGTCGGCGCCGTGATGGTGCTGCGCGACGTCACCGAGCAACGCGCCTTCGAGCGGGTACGCAGCGAATTCATCCTGCGTGCCTCCCATGAGCTGCGTACACCGATCACCGGCATGCACATGGCCTTCAGCCTGCTGCGCGAACGGCTGCAGGTGCCAGCGGGCGGACGCGAGCAGGACCTGATGCGCACCGTCGACGAGGAAATGCGCCGCCTGGTGCAGCTGATCGACGACCTGCTCAACTTTTCGCGCTACCAGAACGGCCTGCAGACCCTGCAGCGGGTCCCGTGCGATCTCGCCGTCATGCTCCAGCAGGCGCGCCAGCGCTTCACCGACGAAGCAAGCGAGCGCGGCGTGACCATCACCTGCGAGCTGCACCAGCCGCTGCCGCGCCTGAGCCTCGATGAGGGCCAGCTGCACCGCCTGCTCGACAGCCTGCTCAGCAACGCGCTGCGCCACAGTGACTCGGGCGGCACCGTGACCCTGCAGGCGCACCGCCACGGCGAACAGGTGATCGTCAGCGTGCAGGACCAGGGCGAGGGCATTCCCTACGAACAGCAGGCGCGCATCTTCGAGCCGTTCGTGCAGATCGGCCGGCGCAAGGGTGGGGTCGGGCTGGGGCTGGCCCTGGCACGGGAGATCGTGCAGCTGTTTGGCGGGCAGATGGGCGTACGCTCCCGCCCGCGCGAAGGCGCCAACTTCTACTTCAGCCTGCCGGTCTAG MKLSMKLRTRLFLSISALITVALLGLLLGLFSVTQMSRSQSDLIQRGFTAVQIGQKLRQHLGDELILLIGQTPNPEALENIRQAFRSTLAEGFSAKLGADYVQGLEQAAILHRQMEQVAESATPAGQSPHNLAGNIPFTEAFQKLRNHLLDQQDRVVSWVIAAEHKAGERSRLIAGLLVMTGLAVLAIGVITANGIARRFGAPIDLLARAADQIGKGQYDVVLPVSPVVELAVLSRRFGLMTEALRQYHSSNLTQLLNSEGRLKAVLDSIDDGLVILDALGRVEHANPVALSQLSWKQDIQDQPIGPLLPGHAVDEALRQVLAGEPMREPPADLQIDRNGEVRLLAWALTPVQVREGGSVGAVMVLRDVTEQRAFERVRSEFILRASHELRTPITGMHMAFSLLRERLQVPAGGREQDLMRTVDEEMRRLVQLIDDLLNFSRYQNGLQTLQRVPCDLAVMLQQARQRFTDEASERGVTITCELHQPLPRLSLDEGQLHRLLDSLLSNALRHSDSGGTVTLQAHRHGEQVIVSVQDQGEGIPYEQQARIFEPFVQIGRRKGGVGLGLALAREIVQLFGGQMGVRSRPREGANFYFSLPV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0176 CDS 176708 178060 - two-component response regulator AlgB YP_001185682.1 146305217 5106856 PFAM: response regulator receiver ; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase Two-component system [KEGG] Cytoplasmic[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006808|regulation of nitrogen utilization|IEA ; molecular_function|GO:0000156|two-component response regulator activity|IEA ; molecular_function|GO:0003677|DNA binding|IEA TIGR01818|ntrC|nitrogen regulation protein NR(I)|equivalog|1.6e-100||Central intermediary metabolism | Regulatory functions | Signal transduction|Nitrogen metabolism | DNA interactions | Two-component systems PF00072|Response_reg, Response regulator receiver domain|11|121|2e-28 ; PF07728|AAA_5, ATPase family associated with various cellular activities (AAA)|170|340|9e-06 ; PF00158|Sigma54_activat, Sigma-54 interaction domain|150|368|1e-101 COG2204|AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]. ATGGCAGCGTCAGAACAGACCAGCGGGCGAATTCTGCTGGTGGACGACGAGGCGGCAATCCTGCGCACCTTCCGCTACTGCCTGGAAGATGAGGGCTACGAGGTCGCCGGCGCCAGCAGCGCGGCGCAGGCCGAAGCGCTGTTGCAGCGCCAGGTGTTCGACCTGTGTTTCCTCGACCTGCGTCTGGGCGAGGACAATGGCCTCGACCTGCTGGCGCAGATGCGCATCCAGGCCCCCTGGATGCGCGTGGTGATCGTCACCGCCCACTCGGCCGTGGACACCGCGGTCGACGCGATCCAGGCCGGCGCTGCCGACTATCTGGTCAAGCCCTGCACGCCGGACCAGCTGCGCCTCGCCGCCATCAAGCAGCTGGAGGTGCGCGCCCTGGCGGCGCGGCTGGAGGCGCTGGAAGGCGAAGTGCGCAAGGCCAAGGACGGTCTCGACTCGCACAGCCCGGCGATGATGGCGATCCTGGAAACCGCGCGCCAGGTGGCGGCTACCGATGCCAACATCCTCATCCTCGGCGAATCCGGCACCGGCAAGGGCGAACTGGCCCGCGCCATCCACGGCTGGAGCCGCCGCGCCAAGCGCACCTGCGTGACCATCAACTGCCCGTCGCTGACCGCCGAGCTGATGGAAAGCGAGCTGTTCGGCCATGCCCGCGGCTCCTTCACCGGCGCCAGCGAGAGCACCCAGGGCCGGGTCAGCCAGGCCGACGGCGGCACCCTGTTCCTTGACGAGATCGGCGACTTCCCGCTCGCCCTGCAACCCAAGCTGCTGCGCTTCATCCAGGACAAGGAATACGAACGCGTGGGCGATCCGGTCACCCGCCGCGCCGATGTGCGCATCGTCGCCGCCACCAACCTGGATCTGGACGAGATGGTGCGCGAGGGGCGCTTTCGCGAGGATCTGCTGTATCGCCTCAACGTCATCACCCTCAAGCTGCCGCCGCTGCGCGAACGCCATGAAGACGTGATGTCCCTGGCCGAGCGCTTTCTCGCCCACTTCGTCAGCGATTACGGCCGCCCGGCCTGCGGCTTCAGCCCCGAGGCGGTCGCCGCCCTGCATTCCTACCACTGGCCGGGCAACATCCGCGAACTGCGCAACGTCATCGAGCGCGCCAGCATCATCTGCCAGCAGGAGGCCGTGGAGGTCGCCCACCTCGGCCTCGGCGGCAGCAGCGATGCGCCCAACGGCGCCATCCGCGTGGGCGCGCCCATGAGCCTCGAGGAGCTGGAAAAGGCCCATATCGCTGCCGTTCTGGCCAGCAGCAACACCCTGGACATGGCCGCCAGGACCCTGGGCATCGATACTTCGACCCTGTATCGCAAACGCAAGCAGTACAACCTCTGA MAASEQTSGRILLVDDEAAILRTFRYCLEDEGYEVAGASSAAQAEALLQRQVFDLCFLDLRLGEDNGLDLLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCTPDQLRLAAIKQLEVRALAARLEALEGEVRKAKDGLDSHSPAMMAILETARQVAATDANILILGESGTGKGELARAIHGWSRRAKRTCVTINCPSLTAELMESELFGHARGSFTGASESTQGRVSQADGGTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRIVAATNLDLDEMVREGRFREDLLYRLNVITLKLPPLRERHEDVMSLAERFLAHFVSDYGRPACGFSPEAVAALHSYHWPGNIRELRNVIERASIICQQEAVEVAHLGLGGSSDAPNGAIRVGAPMSLEELEKAHIAAVLASSNTLDMAARTLGIDTSTLYRKRKQYNL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0177 CDS 178271 179101 + transport-associated YP_001185683.1 146305218 5106857 PFAM: transport-associatedSMART: Transport-associated and nodulation region, bacteria ; PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria Periplasmic[Class 3] PF04972|BON, Putative phospholipid-binding domain|124|185|3e-10 COG2823|OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only]. ATGCCGTTTTTGAGAACCTTGTTGCTGGCCGGTGGCACTGCGCTGCTGCTGAGTCTGACGCCCCTGGCCAGCCATGCTGCCACGGACGGGCTGACCGAGCAGATCGAGGCCGCACGCCAGGAGGGTTCGATCTGGACGGCCTTCGCCCTGAACCGTCACCTCAACCCCTTCAGGCTCGACGTGGCAGTCGAGAAGGGCCGCGCGACCCTCGATGGTCAGGTCGAAAGCGAGGTGCAGAAGGAGCTGGCCGAGGAGGTGGCGCTGAGCGTGAAGGGGGTGGAGAGCGTGGATAACCGCATCGTGGTCGATGCCGCCACCGCCGAGAACGAGCCGCCGCGGCTGGTGCAGCGGCTGGAGGACGCCAGCCTGGCGGCGACGGTGAAATCCAAGCTGCTGTGGAACAGCAACACCCGTGGCCTGGATATCCAGGTCAAGAGCCAGAACGGCGCCATCACCCTCAGCGGCCACGCGCAGACCCCGGCCGCCAAGGAGTTGGCCGGCCAGCTCGCCGCCAACACCGATGGCGTGCGCGAAGTGTTCAATCACCTGAGCATCAGCACCGCCGACAGCAGCAGTAGCGAGGTGCAGACGGCTGTCGAGGAAGCGCGCGAAGACATCAGCGACAGCTGGATCACCAGCAAGGTCAAGGCCAGCTTCCTGTATAGCCGCAACCTCGATGCGCTGAACATCTCGGTGGACACCGAGGACGGCCTGGTCAGGCTACGCGGTAGCGTGCTGAGCAGTGCCGAGAAACGTCTGGCGGTGGAGATCGCCCGCAATATCCGCGGTGTGCGCGGCGTCGATGCCGACGCCCTGCGCATCAGCAGCTGA MPFLRTLLLAGGTALLLSLTPLASHAATDGLTEQIEAARQEGSIWTAFALNRHLNPFRLDVAVEKGRATLDGQVESEVQKELAEEVALSVKGVESVDNRIVVDAATAENEPPRLVQRLEDASLAATVKSKLLWNSNTRGLDIQVKSQNGAITLSGHAQTPAAKELAGQLAANTDGVREVFNHLSISTADSSSSEVQTAVEEAREDISDSWITSKVKASFLYSRNLDALNISVDTEDGLVRLRGSVLSSAEKRLAVEIARNIRGVRGVDADALRISS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0178 CDS 179167 179601 + hypothetical protein YP_001185684.1 146305219 5106858 Cytoplasmic[Class 3] TIGR02284|TIGR02284|conserved hypothetical protein|subfamily|6.9e-27||No Data|No Data PF09537|DUF2383, Protein of unknown function (DUF2383)|8|112|2e-27 ATGAGCAGCAAGACCGCACAACTCAACGAACTGATCGAAATTACCCGCGACGGCAAGCGCTTCTACGAGCATGCCCACGACGAGGTCAAGGACATCCGCCTGCAGGCGCTGTTCCGCGACATGGTGCGGGCCAAGACCGAGGTGATCGACGCCCTGAGCGTCAAGGTGGCCGCCAACCAGGCCGACCCGGCGAGCGGCGGCACCCTGCTGGGCAAGCTGCGCCAGCTCTACGCCGATACCCGCGCCACCCTGTCCAAGGACGAGGACGCCGCCTACGTGGCCCAGCTGGAAGAGGCCGAAGACCGCATCCTGCATGCCTTCGAGGATGCGCTGGAAAGCGCCGACCAGGACGTGCGGGTACTGCTGGCGGTGGAGATGCCCAAGGTGCGCGCCTGCCATGACCGCATGCGTGCGCTGAAGCAGAACATGCAGTAA MSSKTAQLNELIEITRDGKRFYEHAHDEVKDIRLQALFRDMVRAKTEVIDALSVKVAANQADPASGGTLLGKLRQLYADTRATLSKDEDAAYVAQLEEAEDRILHAFEDALESADQDVRVLLAVEMPKVRACHDRMRALKQNMQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0179 CDS 180505 181473 + phosphate binding protein YP_001185685.1 146305220 5106859 TIGRFAM: phosphate binding proteinPFAM: extracellular solute-binding protein, family 1 ; TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1 ABC transporters [KEGG] ; Two-component system [KEGG] Cytoplasmic Membrane[Class 3] TIGR02136|ptsS_2|phosphate binding protein|subfamily|1.5e-77||Transport and binding proteins|Anions COG0226|PstS, ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism]. ATGAAACTGAAGCGTTTGATGGCGGCCCTGACTTTCGCCGCCGCCGGCGTAAGCGCCGTATCTGCTGTAGCCGCCGTCGACCCGGCTCTGCCGAACTACGAAAAGACTTCCGGTGTATCGGGTAACCTGTCCAGCGTCGGCTCCGACTCCCTGGCCAACCTGATGACCCTGTGGGCAGAAGAGTTCAAGAAGAACTACCCCAACGTCAACATCCAGATCCAGGCCGCCGGTTCCTCCACCGCGCCGCCCGCCATGACCGAAGGCACCGCCAACATGGGCCCGATGAGCCGTCCGATGAAGGACAGCGAAATCCAGGCCTTCGAAGAGAAGTACGGCTACAAGCCGACCGCCGTTCCGGTGGCCATCGACGCCCTGGCCGTGTTCGTGCACAAGGACAACCCGATCAAGTCGCTGTCCATCGAGCAGGTCGACGCGATCTTCTCCAGCACCCGCCTGTGCGGTGGCGACAAGGACATCAAGACCTGGGGTGACCTCGGTCTGACCGGCGAGTGGGCCAGCAAGCCGCTGCAGCTGTTCGGCCGCAACTCGGTTTCCGGCACCTACGGCTACTTCAAGGAAGAAGCCCTGTGCAAAGGTGACTTCAAGTCCAACGTCAACGAGCAGCCGGGTTCGGCTTCCGTGGTGCAGTCGATCTCCAGCACCCTGAACGCCATCGGTTACTCGGGCATCGGCTACAAGACCTCCAGCGTCCGCGCCGTTCCGCTGTCGAAGAAAGGCGGCGAAGCCTTCGAAGCTTCCGAAGAGAACGCCCTGGCTGGCAAGTTCCCGCTGGCTCGCTTCTTCTACGTCTACGTCAACAAGGCGCCGAACCAGCCGCTGAGCCCGCTGGACGCCGAGTTCGTCAAGCTGATGCTGTCCAAGCAAGGTCAGGAAGTGGTGATGAAGGATGGTTACATCCCGCTGCCGTCGAAAGTGGCCGAGAAAGCCCTGAAGGAACTGGGTCTGTAA MKLKRLMAALTFAAAGVSAVSAVAAVDPALPNYEKTSGVSGNLSSVGSDSLANLMTLWAEEFKKNYPNVNIQIQAAGSSTAPPAMTEGTANMGPMSRPMKDSEIQAFEEKYGYKPTAVPVAIDALAVFVHKDNPIKSLSIEQVDAIFSSTRLCGGDKDIKTWGDLGLTGEWASKPLQLFGRNSVSGTYGYFKEEALCKGDFKSNVNEQPGSASVVQSISSTLNAIGYSGIGYKTSSVRAVPLSKKGGEAFEASEENALAGKFPLARFFYVYVNKAPNQPLSPLDAEFVKLMLSKQGQEVVMKDGYIPLPSKVAEKALKELGL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0180 CDS 181639 183924 + binding-protein-dependent transport systems inner membrane component YP_001185686.1 146305221 5106860 PFAM: binding-protein-dependent transport systems inner membrane component ABC transporters [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0006817|phosphate transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015415|phosphate transmembrane-transporting ATPase activity|IEA TIGR02138|phosphate_pstC|phosphate ABC transporter, permease protein PstC|equivalog|1.7e-23||Transport and binding proteins|Anions COG4590|COG4590, ABC-type uncharacterized transport system, permease component [General function prediction only]. ATGAACGACTTGGCAAACGACACCGTGAACCGACCGCAGAACCCCCTGGGGATCGACTTCAACACCCCCGCCCTGCAACGCAAGCGCCGCCTGCGCGCGCTGAAGGATCGCCTGGCGCGCTGGTACGTCTCCATTGGCGGCCTGGCGGTACTCGGTGCCATCACCCTGATCTTCTTCTACTTGGCCCATGTGGTGCTACCCATGTTCCAGGGCGCCGAAATCGAGGCGCGCAAGGCCCAGCAGCCAGCCTGGCTCGGCCAGGCCGGTGCGCCCCTGCTGCTGGCCATCGAAGAGCAGAACCAGGTGGCCATGCGTCTGGACGACGCCGGCGTGGTGCAGTTCTTCGAGCTGCGCACCGGCGAGCCGCTGCAGCGCGTGCAACTGCCGTTGCCGGAAGGCGTCAGCGTCGCCTCGGTAGCGCAGGATCAGCCGGGCAGCCGGCGCGCCGTGCTCGGCCTGTCCAACGGCCAGGTGCTGATCGTTCAGCACAACTACAAGGTCAGCTATCCGGACAACGTCCGCGTCATCACCCCGCAGATCGACTACCCCTACGGCGAGACGCCGATCGAGCTGGACCCGCAGGGGCGCCCGCTCGAGCACGTGGCGTTGAACCTCAACAGCGGCACCCTGATGCTGGCCGGTGCCACCGGCAGCGAGCTGCACCTGATCAGCATCGGGCGCGAGGAAAACCTGTTCACCGGCGAGGTGAGCCTGAGCGAGGAGCGCATCGGCCTGCCGCAGATCGGCGAGCCGATCACCCAGCTGATCCTCGACCCGCGGCAGATGTGGCTGTACGTGTTCAACGGCGACTCCACCGCCGATGTCTTCGACCTGCGCAAGCGCAGCCTCAACGGCCGCTACGACCTGCTCAAGGACGCCTCCAATCGCGTCACCAGCGCCAAGGCGCTGCTGGGCGGCATCTCGATCATGATCGGTGACGCCAAGGGCGGCATCCAGCAGTGGTTCATGGTGCGCGATGGCGACGGCAAGTCCACCTTCCAGCCGATCCGCAGCTTCCAGCTGGGCACCAGCGCCATCACCCAGATCCTCCCCGAGGAGCGCCGCAAGGGCTTCATGGCGCTGGACGAGAGCGGTCGCCTGGGCATCTTCCACAGCACCGCGCACCGCACCCTGCTCAAGGAGCAGGTCGCCGAAGGCCGCGGTATTGCCGCCCTGTCGCCGCGCGCCAGCCGCGTGCTGGTGGAGTCGGACGGCAAGCTGCAGCGCTTCGTGGTCGACAACCCGCACCCGGAAGTGTCCTGGAGCGCGCTGTGGGGCAAGGTCTGGTACGAGAGCTACCCGGAGCCGGATTACGTCTGGCAGTCCACCTCGGCCAACACCGATTTCGAGGCCAAGCTGAGCCTCTCGCCGCTGGCCTTCGGTACTCTCAAGGCCGCCTTCTACGCCATGCTTCTGGCCGCGCCCCTGGCGGTGGCCGCGGCAATCTACACCGCCTACTTCATGGCGCCGCGCATGCGCACCAAGGTCAAGCCGGTGATCGAGCTGATGGAGGCGCTGCCGACGGTGATCCTCGGTTTCTTCGCCGGCCTGTTCCTCGCGCCGTTCCTGGAGAACCACCTGCCCGGCATATTCAGCCTGCTGCTGTTGACCCCGGTGGGGATCCTCGCCGCCGGTTACCTGTGGACCAAGATGCCCGAGTCGGTCCGCCACCGCGTGCCGGACGGTTGGGAAGCCGCGCTGCTGATCCCGGTGGTGATCGCCGTGGGCTGGTTCTCGCTGTCGATCAGCGGCCACCTGGAGAACTGGTTCTTCGACGGCAACATGCGCCTGTGGCTGTCCAACGACCTGGGTATTCCGTTCGATCAGCGCAACGCCCTGGTGGTGGGTCTGGCCATGGGTTTCGCGGTGATCCCGAACATCTACTCGATCGCCGAAGACGCCGTGTTCAGCGTGCCCAAGAGCCTGACCTTCGGTTCTCTGGCCCTCGGCGCCACGCCCTGGCAGACCCTGACCCGCGTGGTGATCCTCACCGCCAGCCCGGGCATCTTCTCGGCGCTGATGATTGGCATGGGCCGCGCCGTGGGCGAGACCATGATCGTGCTGATGGCCACCGGCAACACGCCGATCATGGACATCAACATCTTCGAAGGCATGCGCACCCTGGCTGCCAACGTCGCGGTGGAAATGCCCGAGTCGGAAGTCGGCGGCACCCACTATCGCGTGCTGTTCCTCGCCGCGCTGGTACTGCTGCTGTTCACCTTCGTGATGAACACCCTGGCCGAGCTGATTCGTCAGCGCCTGCGCACCAAGTATTCGTCGCTCTAA MNDLANDTVNRPQNPLGIDFNTPALQRKRRLRALKDRLARWYVSIGGLAVLGAITLIFFYLAHVVLPMFQGAEIEARKAQQPAWLGQAGAPLLLAIEEQNQVAMRLDDAGVVQFFELRTGEPLQRVQLPLPEGVSVASVAQDQPGSRRAVLGLSNGQVLIVQHNYKVSYPDNVRVITPQIDYPYGETPIELDPQGRPLEHVALNLNSGTLMLAGATGSELHLISIGREENLFTGEVSLSEERIGLPQIGEPITQLILDPRQMWLYVFNGDSTADVFDLRKRSLNGRYDLLKDASNRVTSAKALLGGISIMIGDAKGGIQQWFMVRDGDGKSTFQPIRSFQLGTSAITQILPEERRKGFMALDESGRLGIFHSTAHRTLLKEQVAEGRGIAALSPRASRVLVESDGKLQRFVVDNPHPEVSWSALWGKVWYESYPEPDYVWQSTSANTDFEAKLSLSPLAFGTLKAAFYAMLLAAPLAVAAAIYTAYFMAPRMRTKVKPVIELMEALPTVILGFFAGLFLAPFLENHLPGIFSLLLLTPVGILAAGYLWTKMPESVRHRVPDGWEAALLIPVVIAVGWFSLSISGHLENWFFDGNMRLWLSNDLGIPFDQRNALVVGLAMGFAVIPNIYSIAEDAVFSVPKSLTFGSLALGATPWQTLTRVVILTASPGIFSALMIGMGRAVGETMIVLMATGNTPIMDINIFEGMRTLAANVAVEMPESEVGGTHYRVLFLAALVLLLFTFVMNTLAELIRQRLRTKYSSL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0181 CDS 183940 185616 + phosphate ABC transporter, inner membrane subunit PstA YP_001185687.1 146305222 5106861 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstAPFAM: binding-protein-dependent transport systems inner membrane component ; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component ABC transporters [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0006817|phosphate transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015415|phosphate transmembrane-transporting ATPase activity|IEA TIGR00974|3a0107s02c|phosphate ABC transporter, permease protein PstA|equivalog|5.8e-90||Transport and binding proteins|Anions PF00528|BPD_transp_1, Binding-protein-dependent transport system inner membrane component|310|483|5e-09 COG4985|COG4985, ABC-type phosphate transport system, auxiliary component [Inorganic ion transport and metabolism]. ATGTCCGTGAAACAGAACAACCTGAAATCCTGGTACAAGAGCGGCGCCCCCGGCGTGTGGATGAGCGGTGGCGCGGTGGCCATCGCCATCATCATGACCCTCGGTCTGCTGGCCGTGATCGCCACCCGCGGTCTGGGCCATTTCTGGCCGGCCGATATCCTCGAAGCCGACTACCAGGTGCCTGGTCAGGAAGCGCGGGTGATGCTCGGTGAGGTGGTGCAGGTCGAGGAAGTGCCGCGCGCCCGTCTGGCCGCCGCCGGTCTGCCGGTGGCCGAAGAGGGCGGCGAGTTCATGACCCGCGAGCTGCTCAAGGTGGGCAACCGCGAACTGTTCGGCGCAGATTTCACCTGGGTGGTCGGCGAGTGGCTGAGCAACCCGCGCAAGCCGGCCGGCATCACCGTGCTGGAGCGCCGCGAATGGGGCAACTTCTACGGCAACCTGATCAACGTCAAGGAAGGCGGACAGGTCGTCGCCGAGGGCGATGCCGCCTGGTCCGAACTGCAGCAGCGACTGGATCGCGTCGACGCGCTGCATGCCCAGCTGGTGCGCCTGGAGAAGAAGGACATCGGCCGCATCAACCACGGTCTCGAGCGCATTCGTCTGGAAGGCCGCAAGCTGCAGCTGCAGGGCAAGCTGGACGCCGACGCGCAGGCCGCCCTGGATGCGCGCCGCGACGCGCTGAATGCCGACTACAAGGTGCTCGAAGAGCAGATGGTCGCGCTGGTTCAGCAGATCAACCGCGACAGCGTGACCCTGAGCGCCAGCGATGGTCGGCAGACCGAGATCGCCCTGGGCAAGGTGGTACGGGCCTTCCGCCCGAACGCCATGAGCACCCTCGACAAGTTCGGCTTCTACGCCATGAAGCTGTGGGAGTTCGTCAGCGACGAGCCGCGTGAGGCCAACACCGAAGGCGGGATCTTCCCGGCCATCTTCGGCACCGTGCTGATGGTGATGCTGATGGCGGTGATCGTCACCCCGTTCGGCGTGATCGCCGCGGTGTATCTGCGCGAGTACGCGCATCAGGGCGCGCTGACCCGGGTGATCCGTATCGCGGTGAACAACCTCGCCGGCGTGCCCTCGATCGTCTACGGCGTGTTCGGCCTGGGCTTCTTCGTCTATGTGCTGGGCGGCAATATCGACCGGCTGTTCTTCCCCGAATCGGCCCCGGCGCCGACCTTCGGCACACCGGGCCTGATGTGGGCCTCGCTGACCCTGGCGATCCTCACCCTGCCGGTGGTCATCGTCGCCACCGAGGAAGGTCTGGCGCGTATCCCGCGTGCGGTGCGCGAAGGCTCGCTGGCCCTCGGTGCGACCAAGGCCGAGACGCTGTGGAAGGTGGTGATCCCGATGGCCAGCCCGGCGATGATGACCGGCCTGATTCTCGCCGTGGCACGTGCCGCCGGCGAGGTGGCACCGCTGATGCTGGTGGGCGTGGTCAAGCTGGCGCCGAGCCTGCCGCTCAACGGCAACTACCCCTATCTGCACCTGGATCAGAAGATCATGCACCTGGGCTTCCACATCTACGACGTCGGCTTCCAGAGCCCCAACGTCGAGGCCGCGCGCCCGCTGGTGTACGCCACGGCACTGCTGCTGGTGATCGTCATCGCCCTGCTCAACCTGACCGCGGTCTATATCCGTAACCACCTGCGCGAGAAGTACAAGGCGCTGGATCACTAA MSVKQNNLKSWYKSGAPGVWMSGGAVAIAIIMTLGLLAVIATRGLGHFWPADILEADYQVPGQEARVMLGEVVQVEEVPRARLAAAGLPVAEEGGEFMTRELLKVGNRELFGADFTWVVGEWLSNPRKPAGITVLERREWGNFYGNLINVKEGGQVVAEGDAAWSELQQRLDRVDALHAQLVRLEKKDIGRINHGLERIRLEGRKLQLQGKLDADAQAALDARRDALNADYKVLEEQMVALVQQINRDSVTLSASDGRQTEIALGKVVRAFRPNAMSTLDKFGFYAMKLWEFVSDEPREANTEGGIFPAIFGTVLMVMLMAVIVTPFGVIAAVYLREYAHQGALTRVIRIAVNNLAGVPSIVYGVFGLGFFVYVLGGNIDRLFFPESAPAPTFGTPGLMWASLTLAILTLPVVIVATEEGLARIPRAVREGSLALGATKAETLWKVVIPMASPAMMTGLILAVARAAGEVAPLMLVGVVKLAPSLPLNGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVIVIALLNLTAVYIRNHLREKYKALDH Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0182 CDS 185683 186516 + phosphate transporter ATP-binding protein YP_001185688.1 146305223 5106862 TIGRFAM: phosphate ABC transporter, ATPase subunitPFAM: ABC transporter relatedSMART: AAA ATPase ; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase ; ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation ABC transporters [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0006817|phosphate transport|IEA ; cellular_component|GO:0009898|internal side of plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0005524|ATP binding|IEA ; molecular_function|GO:0015415|phosphate transmembrane-transporting ATPase activity|IEA TIGR00972|3a0107s01c2|phosphate ABC transporter, ATP-binding protein|equivalog|2.6e-195|3.6.3.27|Transport and binding proteins|Anions PF00005|ABC_tran, ABC transporter|57|248|8e-41 COG1117|PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]. ATGCAACACGAAACCCATACCCACGGTATCGACCTGGCCGCCCTCGGCCGCGACAAGCAGAGCCTGAGCCTGGCCAACGAGACCACGGCTATCCAGGTGCCGGGCCTGAACCTGTACTACGGCCAGAAGCAGGCGCTGTTCGACGTCAAGATGGACATCCCCAAGCAGCGCGTGACCGCCTTCATCGGCCCGTCCGGCTGCGGCAAGTCGACCCTGCTGCGCACCTTCAACCGCATGAACGACCTGGTCGACGGTTGCCGCGTGGAAGGCGAGATCAACATCGACGGGCGCAACATCTACCGCAAGGGCGAGGACGTGGCCGAGCTGCGTCGCCGCGTCGGCATGGTGTTCCAGAAGCCCAACCCCTTCCCCAAGAGCATCTACGAGAACGTGGTGTACGGCCTGCGCATCCAGGGCATCAACAGCAAGCGTGTGCTCGACGAGGCGGTGGAATGGGCGCTGAAGAGCGCGGCGCTGTGGGACGAGGTCAAGGACCGTCTGCACGACTCGGCCCTCGGCCTGTCCGGTGGTCAGCAGCAGCGTCTGGTGATCGCCCGCACCGTGGCCGTGCAGCCGGAAGTGCTGCTGCTCGACGAACCCTGCTCGGCGCTCGACCCGATCTCCACGCTGAAGGTCGAAGAGCTGATCTACGAGCTCAAGAGCAAGTACACCATCGTCATCGTCACCCACAACATGCAGCAGGCGGCGCGCGTCTCCGACTACACCGCGTTCATGTACATGGGCAAGCTGATCGAGTTCGGCGACACCGATACCCTGTTCACCAACCCGGCCAAGAAGCAGACTGAAGACTACATCACCGGTCGTTACGGCTGA MQHETHTHGIDLAALGRDKQSLSLANETTAIQVPGLNLYYGQKQALFDVKMDIPKQRVTAFIGPSGCGKSTLLRTFNRMNDLVDGCRVEGEINIDGRNIYRKGEDVAELRRRVGMVFQKPNPFPKSIYENVVYGLRIQGINSKRVLDEAVEWALKSAALWDEVKDRLHDSALGLSGGQQQRLVIARTVAVQPEVLLLDEPCSALDPISTLKVEELIYELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLIEFGDTDTLFTNPAKKQTEDYITGRYG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0183 CDS 186678 187406 + phosphate uptake regulator, PhoU YP_001185689.1 146305224 5106863 TIGRFAM: phosphate transport system regulatory protein PhoUPFAM: PhoU family protein ; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein Cytoplasmic[Class 3] biological_process|GO:0006817|phosphate transport|IEA ; biological_process|GO:0051049|regulation of transport|IEA ; molecular_function|GO:0003700|transcription factor activity|IEA TIGR02135|phoU_full|phosphate transport system regulatory protein PhoU|equivalog|5.3e-112||Regulatory functions | Transport and binding proteins|Other | Anions PF01895|PhoU, PhoU domain|26|114|8e-15 COG0704|PhoU, Phosphate uptake regulator [Inorganic ion transport and metabolism]. ATGATCAACAAAGACAACCTTACCCAGCACATCTCCCAGCAGTTCAACGCCGAGCTGGAAGAAGTGCGCAGCCACCTGCTGGCCATGGGCGGCCTGGTGGAGAAGCAGGTCAACGACGCCGTCACCGCGCTGATCGAGGCCGACTCCGGCCTGGCCCAGCAGGTGCGCGAGATCGACGACCAGATCAACCAGATGGAGCGCAACATCGACGAGGAATGCGTGCGCATCCTCGCCCGCCGCCAGCCGGCGGCCTCCGACCTGCGCCTGATCATCAGCATCTCCAAGTCGGTGATCGACCTGGAGCGCATTGGTGACGAGTCGACCAAGATCGCCAAGCGCGCCATCCAGCTGTGTGAAGAAGGCGAGTCGCCGCGTGGCTATGTCGAGGTCCGTCACATCGGCGACCAGGTACGCCGGATGGTGCAGGAGGCGCTGGACGCCTTCGCCCGTTTCGATGCCGACCTGGCGCTGTCGGTGGCGCAGTACGACAAGACAGTCGACCGCGAGTACAAGACCGCCCTGCGCGAGCTGGTCACCTACATGATGGAAGATCCGCGTTCGATCTCCCGCGTGCTCAACGTGATCTGGGCGCTGCGCTCGCTGGAACGCATCGGCGACCACGCGCGCAACATCGCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATCGGCCTGACGCGCATGCGCGAAGAGGTCGAGGGCAAGCCCGAGGCCTGA MINKDNLTQHISQQFNAELEEVRSHLLAMGGLVEKQVNDAVTALIEADSGLAQQVREIDDQINQMERNIDEECVRILARRQPAASDLRLIISISKSVIDLERIGDESTKIAKRAIQLCEEGESPRGYVEVRHIGDQVRRMVQEALDAFARFDADLALSVAQYDKTVDREYKTALRELVTYMMEDPRSISRVLNVIWALRSLERIGDHARNIAELVIYLVRGTDVRHIGLTRMREEVEGKPEA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0184 CDS 187542 188450 + response regulator receiver protein YP_001185690.1 146305225 5106864 PFAM: response regulator receiver Cytoplasmic[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; biological_process|GO:0006796|phosphate metabolic process|IEA ; molecular_function|GO:0000156|two-component response regulator activity|IEA ; molecular_function|GO:0003700|transcription factor activity|IEA TIGR02154|PhoB|phosphate regulon transcriptional regulatory protein PhoB|equivalog|9.3e-09||Regulatory functions | Signal transduction|DNA interactions | Two-component systems PF00072|Response_reg, Response regulator receiver domain|6|120|7e-24 COG2204|AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]. ATGAGCAAAGTCAGTGTGCTGGTGGTGGATGACGCGACCTTTATCCGTGATCTGGTCAAGAAAGGGCTGCGCGATCACTTTCCCGGCGTACAGATCGACGAGGCAGTCAACGGGCGCAAGGCCCAGCAACTGCTGGGTCGGCAAGATGTCGACCTGATTCTCTGCGACTGGGAAATGCCGGAGATGTCCGGCCTCGAGCTGCTGACCTGGTGTCGCGAGCAGGAGCGCCTGAAAACCACGCCCTTCATCATGGTCACCAGCCGTGGCGACAAGGAAAACGTGGTGCAGGCGATCCAGGCCGGCGTTTCCGACTACATCGGCAAGCCGTTCTCCAACGAGCAGCTGGTGACCAAGGTGAAGAAGGCGCTGAGCCGCGCCGGCAAGCTGCAGGCGCTGGCTGCCAGTGCGCCGCCGAAGATGCTCAGCAGCGGCGGTTTCGCCAACGACTCGCTGGCCGCGCTGACCGGCGGCAAGGCCGAGGTGGTCAAGCCCAGTGCACCGACCCCGCCGCCTGCCACTGCCGCTGCGCCGAGCGCCGCGCCTGCACCCGCCGCCGCCAGCAAGGCGCCGGCCGGTCGTGGCCAGGGCCAGCTGCGCCTGCCGGGCGGCAGCATGGCCTGCGTGATCAAGGCGCTGAGCCTCAAGGAGGCCCTGCTGGTGGTCAAGCGCGGCGAGCCATTGCCGCAGGTGCTGGAAAGCGCGGTGCTCGATCTGGAACAGGGCGAGGCGGCGGAAACCGCGCGACTCAACGGCTATCTGCATGCGGTGGCGGCCTTCGAGCCCAAGCCCGATAGCGAATGGCTGCAGCTGACCTTCCGTTTCGTCGACCGCGACCCGCAGAAGCTCGATTACCTGTCCCGCCTGATCGCCCGCGGCACCGCGCAGAAGCACTTCGTCCCCGGCGCGTAG MSKVSVLVVDDATFIRDLVKKGLRDHFPGVQIDEAVNGRKAQQLLGRQDVDLILCDWEMPEMSGLELLTWCREQERLKTTPFIMVTSRGDKENVVQAIQAGVSDYIGKPFSNEQLVTKVKKALSRAGKLQALAASAPPKMLSSGGFANDSLAALTGGKAEVVKPSAPTPPPATAAAPSAAPAPAAASKAPAGRGQGQLRLPGGSMACVIKALSLKEALLVVKRGEPLPQVLESAVLDLEQGEAAETARLNGYLHAVAAFEPKPDSEWLQLTFRFVDRDPQKLDYLSRLIARGTAQKHFVPGA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0185 CDS 188598 189494 + peptidase M23B YP_001185691.1 146305226 5106865 PFAM: peptidase M23B Unknown[Class 3] PF01551|Peptidase_M23, Peptidase family M23|177|271|4e-25 COG0739|NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]. ATGCTAGGGCGTCTGTTCTTTCTCTGCAGTCTGCTGGCCTTCAGCGGCCAGGCCGCTGCCCTGACCATCTACAAGTACGTCGACAAGAACGGCGTGGTGACCTATAGCGACCAGGCCGCGCCCGGCGCCCAGGTGTTCGTGTTCAACGACCGCATGGTCGAGCGCCTGGACAACCAGGTGAAGCTGGAAACCAAGAAGCACGAGGCCGGCGAGACCCTGCTGATCCGCAACGACCTGTACGCCCCGGTGGAAATCGAGCTGAAGCTGGAGCAGGTGGACAACGCCATCGGTGCGCCGGACAAGCCGATTCGCTGGGTGCTGCCGCCGCGCAGCAATATCCGCCTGGCCACCCTCGCCCCGCAGGACGCCTCCAAGCCGCTGCGCTACAAGCCCAGGTTGCGCTATGCCCTCGGTGATCCGCGCCTGCAGCCAAGCATCCATCGTTACCCGCTGCCCTGGCGCGGGGGGCCGTTCCGCCAGACCCAGGGCGCCAACGGCACCTACAGCCACTTCACCCCCAAGGGCCGCTACGCGGTGGACATCGCCATGCCCGAGGGCACGCCCATCGTCGCCGCGCGCGGCGGCGTGGTGATCAAGACCGAGAACCAGCAGAGCGGGCGCGGCAACAACCCGGCCGGCAACTTCGTGCGCATCCTGCACGACGACGGCACCATGGGCGTCTACCTGCACCTGATGAAGGGCTCGGTAGCCGTGCGCGAGGGCCAGCGCGTGGCGACCGGCCATCTGCTCGCCCGTTCCGGCAATACCGGCAACAGCACCGGCCCGCACCTGCATTTCGTGGTGCAGCGCAATGTCGGCCTGGCGGTCGAATCCATCCCCTTCAACTTCGCCCAGCCGGTCAACAGCCTGCCCAACTTCGCCGTCGGCGGCGAATAG MLGRLFFLCSLLAFSGQAAALTIYKYVDKNGVVTYSDQAAPGAQVFVFNDRMVERLDNQVKLETKKHEAGETLLIRNDLYAPVEIELKLEQVDNAIGAPDKPIRWVLPPRSNIRLATLAPQDASKPLRYKPRLRYALGDPRLQPSIHRYPLPWRGGPFRQTQGANGTYSHFTPKGRYAVDIAMPEGTPIVAARGGVVIKTENQQSGRGNNPAGNFVRILHDDGTMGVYLHLMKGSVAVREGQRVATGHLLARSGNTGNSTGPHLHFVVQRNVGLAVESIPFNFAQPVNSLPNFAVGGE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0186 CDS 189850 191145 + flagellar hook-associated 2 domain-containing protein YP_001185692.1 146305227 5106866 PFAM: flagellar hook-associated protein 2 domain protein ; PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein Flagellar assembly [KEGG] Flagellar[Class 3] ; Extracellular[Class 3] PF02465|FliD_N, Flagellar hook-associated protein 2 C-terminus|8|103|2e-14 ; PF07196|Flagellin_IN, Flagellin hook IN motif|118|173|7e-05 ; PF07195|FliD_C, Flagellar hook-associated protein 2 C-terminus|203|426|9e-40 COG1345|FliD, Flagellar capping protein [Cell motility and secretion]. ATGGCTATCGATTCAGATTACGTACAAAGCATGGCGACCCAACTGGCCAAATACGAGATTCAGGGCCAGTTGGCCAAGGCCAACCGCAACCAGGCGGCGTACAAGGCGCAGCTCAGCGCGCTGACGACCCTGGATACTGCGCTGAAAACCTTCAAGAGCGCCGCCAGCGGCCTCAAGCTGGCCGGCAGCAGCATGCTGGTCAACAGCGCCAGCTTCAGCCAGGAGGGGTACGCCAGCGCCACGGTGGGCAGTAAGGCGGTGGCCGGCAGTTACGATTTCTTCGTCCAGCAGCTGGCCAGCAAGAGTCAGCTCGCCCTGCAGGGCCTGCAGGATGGCGACCTGGGCAGCGGTACCCTGACCATCGGCCAGGGGGGCGATTCGTTCGAGATCGACCTGGGCGCAGTGAGCACCCTCGACGAGCTGGCCGCGGCGATCAACGGCGCCGGCGACAACACCGGCGTCAAGGCGACCCTGGTGCGCAGCAATGGCCAGGTCAACCTGGTGCTGACCAGCGAGAAGACCGGCGCCGATCAGGCCATCAGCCTCAGCGCCGGCGGCAACGCCGCCTTCCAGGGCGCGGTGGCCGGTCGCCAGGAGCTCTCCGTGGCCAGGGACGCCATCGTGCGTCTGGGCGGCGAGACCGGTATCGAGCTGAGCAGCACCAGCAACACCTTCGACAACATCATCGACGGCGTCAGCCTGACCTTCAGCAAGGCGCACAAGGCCGGCGATACGCCGCTGACCATCGAGATCGGCCAGGACCAGAAGGCCACCAAGGAGAAGGCGCAGACCTTCGTCAGCGCCTTCAACGCGCTGATGACCAGCTTCGACTCGCTCACCGCCAGCGGCGGCGAGAGCGGCGGTCGCGGGCCCCTGGCCGGCGATGCCAGCGTGCGCGCCATCGAGACCATGCTCAACCAGCTGGTGCGCACCTCGTTCGGCGGCGCCAGCCTCACCGAGTTCGGCATCGTCGCCAACCGCAACGGCAAGCTGACCATCGACAACGCGCGCTTCGAGAAGGCCGTGGCGGCCAACCCGGAGGGCTTCGAGAAGCTGTTCACCGACAAGGGCAACCTGCTCGACACCCTGGACAAGAACCTGGCGGTCTACACCAGCAGCGCCGGTGGCCTGCTGACCAACCGCAAGGACACCCTCAACACCCAGCTGCGCCGCGTCGATCAGCAGTTCGACAACATCCAGAAGCAGTACGACTCCTACTACAGCCGCTATCTCCGCCAGTACACCGGTCTCATGCAGACCATGGCGGCGATGGAGCAGACCTACGGAATGTTCTGA MAIDSDYVQSMATQLAKYEIQGQLAKANRNQAAYKAQLSALTTLDTALKTFKSAASGLKLAGSSMLVNSASFSQEGYASATVGSKAVAGSYDFFVQQLASKSQLALQGLQDGDLGSGTLTIGQGGDSFEIDLGAVSTLDELAAAINGAGDNTGVKATLVRSNGQVNLVLTSEKTGADQAISLSAGGNAAFQGAVAGRQELSVARDAIVRLGGETGIELSSTSNTFDNIIDGVSLTFSKAHKAGDTPLTIEIGQDQKATKEKAQTFVSAFNALMTSFDSLTASGGESGGRGPLAGDASVRAIETMLNQLVRTSFGGASLTEFGIVANRNGKLTIDNARFEKAVAANPEGFEKLFTDKGNLLDTLDKNLAVYTSSAGGLLTNRKDTLNTQLRRVDQQFDNIQKQYDSYYSRYLRQYTGLMQTMAAMEQTYGMF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0187 CDS 191145 191543 + flagellar protein FliS YP_001185693.1 146305228 5106867 PFAM: flagellar protein FliS Flagellar assembly [KEGG] Cytoplasmic[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; biological_process|GO:0009296|flagellum biogenesis|IEA ; cellular_component|GO:0009288|flagellin-based flagellum|IEA TIGR00208|fliS|flagellar protein FliS|equivalog|1.4e-21||Cellular processes|Chemotaxis and motility PF02561|FliS, Flagellar protein FliS|10|125|1e-15 COG1516|FliS, Flagellin-specific chaperone FliS [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones]. ATGAGTGCCTACAACCTCAACGAAAGTTACGACAGCTACCGCACCGTCGACCTCGAGGCGCGCGCCGCCGCGGCCTCGCCCTACGAGCTGGTGCTGGTGCTGTTCGACGGCCTGCTCGACGAGCTGGCTCGTGCCCGCGGCCATATCGAGGCCAAGCGTTACCAGCAGAAGGGCCAGTCGCTGGAGAAGTGCCTGAACATCCTCGGCGGTCTCAACAGCGCCCTCGATTACGAGAACGGCGGCGAACTGGTGCAGGGCCTGGCGCGCCTCTACGACTACTGCATCTACCGCCTCTCCGACGTCAGCGTCAGCCTGTCGCTGGAAGGCCTCGATGAAGTGGTCGGCCTGCTCGGCGTGCTGCGCGAGGGCTGGGAAGGCGTGAATGCCGCGCGCAAGTGA MSAYNLNESYDSYRTVDLEARAAAASPYELVLVLFDGLLDELARARGHIEAKRYQQKGQSLEKCLNILGGLNSALDYENGGELVQGLARLYDYCIYRLSDVSVSLSLEGLDEVVGLLGVLREGWEGVNAARK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0188 CDS 191527 191844 + hypothetical protein YP_001185694.1 146305229 5106868 Cytoplasmic[Class 3] ATGCCGCGCGCAAGTGAGCTGCGCGCCCTGCAGCACCTGCACGGCCAGCTGGCCGAGGCGCTGGAGCAGGGCGACTGGACGCGCATCGGCGAGATCGATGCGCTGATCCGCTCGTGCCTGCAGCTGCTGGCCGGGCTGCCGACGCTGAGCGACGAAGTGCGCGAGGCCAAGCGGCGTCTGCAGCAGCTGCACGGCCAGGCGCGCATCGCCTGCGCGCAAGAATGCGAACGGGTGCGGCAGCTGCTGCTCAGGCACCTGGAGTACGCCGAAGGGCGCAGCGCCTATTTGCGCGTCGATCAGTTTCAAGGTGGGAGATAA MPRASELRALQHLHGQLAEALEQGDWTRIGEIDALIRSCLQLLAGLPTLSDEVREAKRRLQQLHGQARIACAQECERVRQLLLRHLEYAEGRSAYLRVDQFQGGR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0189 CDS 191848 192906 + flagellar hook-length control protein YP_001185695.1 146305230 5106869 PFAM: flagellar hook-length control protein Outer Membrane[Class 3] PF02120|Flg_hook, Flagellar hook-length control protein|182|306|3e-14 COG3144|FliK, Flagellar hook-length control protein [Cell motility and secretion]. GTGTTGCAGTCGATCAATCCGAGCGTCCAGGTCAGCCTGAGCGGTTCCGCTGTCGAGACCTTGCCGGCCGGCTTCGCCGAGGCGCAGGCAGGCAGCGGCCAACTGCAGGCCTTCGACCTGCAGCTGGCACTGCACGGCTTCAGCGCTGCCGAGGCGAGCACGCCGCTGGAGCAGGACCCTGTACCCGCTAAGGCGCCGCTCGTCGAAGCGGATGCCGAGCAGTGGCTGGCCGGCATGCTCGGTCAGCAGGCCGTGCGCGTGGAGGCGCGCGAGGTGCCCGAGCAGCCCGAGCAGGCTCAGCCCACGGACGACATTCGCGATCCGCAGGCGGTGCCGCTGGCTGCGGTCCTGCTGCCGCAGCATGAGCCAGCCGTGGTGGCGCCTGCGCCGGCGCTCGAGGGGCTGAGCGAAGCGCGTCAGCCCGCGCCTGCCATGCAGCGCACGACGGTGATGACACTGCCGCTCGCGGCGGAGGGCACCGGCCAGCTGCCGTCGCCGCTTGCCCTGACTGACGAGGCGCCTGAGGTGCTGGAGCGCCTGCCGGGCGCCGTGGAAAGCGACAAACCCGCAGCCGGCGGCGCACCCGCCACCCAGGCCGGCGCGCAGCCCCTGACGGCCGAGCGCAGCCTCAAGCTGCCGGTAGCGCAGGCACAGTGGGGCGAGCAGATGCTGCACAGCCTGCGCGAGCAGGTCGAGCTGCAGATCAACCAGCGTATCCAGAACGCCACCATCCGCCTCGATCCGCCGGAGCTGGGCAGTCTGGAAATTTTCCTCAGCCATGAGTCCGGCCGTCTCAACGTGCAGCTTTCTGCGGCCAATGGCGAGGTGGCCAGGCTGCTGCAGCAGATCAGCGAGCGTCTGCGTCAGGAGCTGGTCGGGCAGAACTTCGTGCAGGTCAACGTACAGGTCTCCGCCGATGCTCAGGGCGGTCGTCAGCAGCAACAGGCGCAAGCGCAGCGCTGGCTCGTCGAGGATGAGGTGGCCGCTGCCGTCGCGCTACCCGCCAGCGGCGAGCGCAATGGCGCGCAATCGACCAGCGATGTGCTGGTCACCGTTTAA MLQSINPSVQVSLSGSAVETLPAGFAEAQAGSGQLQAFDLQLALHGFSAAEASTPLEQDPVPAKAPLVEADAEQWLAGMLGQQAVRVEAREVPEQPEQAQPTDDIRDPQAVPLAAVLLPQHEPAVVAPAPALEGLSEARQPAPAMQRTTVMTLPLAAEGTGQLPSPLALTDEAPEVLERLPGAVESDKPAAGGAPATQAGAQPLTAERSLKLPVAQAQWGEQMLHSLREQVELQINQRIQNATIRLDPPELGSLEIFLSHESGRLNVQLSAANGEVARLLQQISERLRQELVGQNFVQVNVQVSADAQGGRQQQQAQAQRWLVEDEVAAAVALPASGERNGAQSTSDVLVTV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0190 CDS 192934 193410 + hypothetical protein YP_001185696.1 146305231 5106870 Unknown[Class 3] PF03748|FliL, Flagellar basal body-associated protein FliL|7|158|4e-11 ATGACAATGCCGCGCGTCCTCCTGCTGCTGGTTATCTTCAACACCCTGGTGGTGGTTGGCGGCACCATCTTCAACTACGCCACGCTCAAGTCCATGCAAACCGGCCAGGCGGTGCTCGGCATTTCCGTCGGCAGCGCCGGCAGCGAAGCCGAGGAAGCCAAGAGCGAATACCGCTTCTTCCCCATCGAGAAGGTCATCGTCAGCCTGCAGGGCGAGAGCCGCGAGCACTACTTCGTGCTGGACCTGGTGCTGCAGGCCGACCTGGAGACCGACCCGAAGAAGCTCGAACAGATCGACCCGATGGTGCGCAACTCGGTGGTGGCACACCTGTCCGCGATGAGCTTCGAGAAGCTGCGCGGCATGCCCATCCCCGAGTTGCAGAGTGCCCTGGAGCGGGCACTGTTCGATGACTTCGCCAGCAAGAAACTGGCGATGCCGTTCGCCAACGTGCTGGTCAGCAAGCTGATCGTCCAGTAA MTMPRVLLLLVIFNTLVVVGGTIFNYATLKSMQTGQAVLGISVGSAGSEAEEAKSEYRFFPIEKVIVSLQGESREHYFVLDLVLQADLETDPKKLEQIDPMVRNSVVAHLSAMSFEKLRGMPIPELQSALERALFDDFASKKLAMPFANVLVSKLIVQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0191 CDS 193427 194161 + RNA polymerase, sigma 28 subunit, FliA/WhiG YP_001185697.1 146305232 5106871 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG familyPFAM: sigma-70 region 2 domain protein ; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2 Two-component system [KEGG] Cytoplasmic[Class 3] TIGR02479|FliA_WhiG|RNA polymerase sigma factor, FliA/WhiG family|subfamily|2.1e-83||No Data|No Data PF04545|Sigma70_r4, Sigma-70, region 4|189|235|2e-07 ; PF04542|Sigma70_r2, Sigma-70 region 2|32|101|2e-06 COG1191|FliA, DNA-directed RNA polymerase specialized sigma subunit [Transcription]. ATGAACGCCACCTGCGCCATCGACTACCGCTACGCCGCCGAACAGGGCGGAGCCGCGCTGTTCGCCCCCGGGGCCGAGCAGAAGTGGCTGCTGCAGTACCTGCCGCTGGTCAAGCGCATCGTCAGCCAGCTGGCGTTGCAGGCCAACCAGGTGCTCGATCGCGAGGACATGGAGCAGATCGGCCTGATGGGTCTGCTCGAATGCCTGCGTCGCTACGGCACGCCGGACGAACAGTTCGGTCGCTTCGCTGCGCTGCGCATCCGTGGCGCGATTCTCGACGAGTTGCGCCGCCAGGACTGGCGACCGCGCCAGGTGCGTCAGCAGACCCACAGGATTCGCGACGCCATCCGCCAGCTGGCCCGCCAGCTCGGTCGCGTGCCGCAGGAGGAGGAAATCCTCGCCGCCGCCGGCATCGACGCCAAGACCTATCAGGAGTTTCTCCAGGCCGACGCCTGCGAGGCCATCGAAAGCCTCGACGAGCTGCTGCAGAGCGGCCATGAGGGCTTCGTCTGCGGTGCCAGCGCAGTGGAGGAGCGGGTGCTCAAGGAGCGCCTGCTGACCCAGGCGTTGAGCCAGCTCAGCGAGCGCGAACGGCTGGTGCTGACCCTTTACTACCAACACGAGCTGAGCCTCAAGGAAATCGCCCTGGTGCTGGAGCTGAGCGACGCGCGCGTCTGTCAGCTGAGCAAGCAGGCGATCGCCAAGGCCAGCCGCTACCTGAACGAGAGAGGCTAG MNATCAIDYRYAAEQGGAALFAPGAEQKWLLQYLPLVKRIVSQLALQANQVLDREDMEQIGLMGLLECLRRYGTPDEQFGRFAALRIRGAILDELRRQDWRPRQVRQQTHRIRDAIRQLARQLGRVPQEEEILAAAGIDAKTYQEFLQADACEAIESLDELLQSGHEGFVCGASAVEERVLKERLLTQALSQLSERERLVLTLYYQHELSLKEIALVLELSDARVCQLSKQAIAKASRYLNERG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0192 CDS 194163 195035 + flagellar motor protein MotA YP_001185698.1 146305233 5106872 PFAM: MotA/TolQ/ExbB proton channel ; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine Two-component system [KEGG] ; Bacterial chemotaxis [KEGG] ; Flagellar assembly [KEGG] Cytoplasmic Membrane[Class 3] COG1291|MotA, Flagellar motor component [Cell motility and secretion]. GTGCAGAAGTTACTAGGTGCATTGATCATCGTCGGCTGCGTGCTGGGGGGCTACGTCATGGCCCACGGCGAGCTGGCCATGCTCTGGCAGCCGGCCGAGGTGGTGATCATCGTCGGCGCCGGCCTCGGCGCGCTGGTGGTGGGCAACCCCAAGGAAGTGCTGGTGGAGATGTGCCAGCAGATCAAGGGCGTATTCGTCTACAAGCGGCGTGGCGAGGAGTTCCAACGCCAGTTGCTGATGCTGCTCTACGAGCTGCTGGAAATGGTCGAGGTCGGCGGCCTCAAGGTGCTCGACGCGCATATCGAGGAGCCGGAGCAGAGCGAGCTGTTCGCCAAGTACCCGCTGATCCGTCAGGAGAAGAACCTGATGGCCTTCATCGCCGACAACTTCCGGCTGATGGCCATGGGCAAGATCAGCGCTCACGAACTGGAAGGCTTTCTCGAGCAGGAGCTCGAAGCCATGGAGCACATCCTGCTGCAGCCGTCGCGCTCGCTGCACAAGATCGGTGAGGCCATGCCGGGCTTCGGCATCCTCGCGGCGATCATGGGCATCATCATCACCATGGGCAACATCGGCGGTTCGGTGGCCGAGATCGGCGCCCACGTGGCGGCCGCGCTGGTCGGCACCTTCCTCGGCATCTTCATGTGCTACTGCGTGATGGAGCCGCTGTCCAACGCCATGAGCCAGCGCATCAAGACCGAGCTGTCGGCGCTCGAATGCGTGCGCACCACCCTGGTCGCCCACGTTGCCGGCAAGCCCACGCTGCTGGCGGTGGATGCCGGGCGCAAGCTGATCGAGCAGGACGTCAAACCCGCATTCAAGCAGCTGGAGACCTGGGTCAACCGCTACGAGGATGAAAGGGACGCGGCATGA MQKLLGALIIVGCVLGGYVMAHGELAMLWQPAEVVIIVGAGLGALVVGNPKEVLVEMCQQIKGVFVYKRRGEEFQRQLLMLLYELLEMVEVGGLKVLDAHIEEPEQSELFAKYPLIRQEKNLMAFIADNFRLMAMGKISAHELEGFLEQELEAMEHILLQPSRSLHKIGEAMPGFGILAAIMGIIITMGNIGGSVAEIGAHVAAALVGTFLGIFMCYCVMEPLSNAMSQRIKTELSALECVRTTLVAHVAGKPTLLAVDAGRKLIEQDVKPAFKQLETWVNRYEDERDAA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0193 CDS 195032 195973 + OmpA/MotB domain-containing protein YP_001185699.1 146305234 5106873 PFAM: OmpA/MotB domain protein Bacterial chemotaxis [KEGG] ; Flagellar assembly [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; cellular_component|GO:0033104|type VI protein secretion system complex|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03350|type_VI_ompA|type VI secretion system OmpA/MotB family protein|equivalog_domain|1.3e-08||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00691|OmpA, OmpA family|175|254|9e-10 COG1360|MotB, Flagellar motor protein [Cell motility and secretion]. ATGAGAAAGCGTGGCGGCGAAGAACACGAGATCATCGTCAAGCGGCGCAGCAAGAAGGGCGGCCACGACGAACATGGCGGTGCCTGGAAAGTGGCCTTCGCCGATTTCACCATGGCCATGATGGCGTTGTTCATGGTGCTGTGGATCATCCAGCCGCAGAACCAGCAGCAGAGCCGCGCCGATGCCGACCAGCTGACCAATCCCCTGGTCGAGGGCGGTGCCGGCATCTTCGACGGCAGCAGCCGCACGCCGCTGGATCTCGATGGCGTACCGGTGCAGGTCAGCCCGCGCAAGGACCGCGACAACCAGGCGCGTACGCCGCAGGAGGATCCCGGTGCCACCCTCGGCGAAGGCCAGCCGGGTGAGCCGCGCCGCCCTCACTACGCCGAACCGGGCCAGATGCAGGAACTCGCCGAGTTGCTGGAGCAGCTGGCGCTGCAGCTGGACGCCGAAGCCAATATCGAGGTGCAGGTGGTACCGCAGGGTCTGCGCATCCTGATCAAGGACGACGCCCAGCGCTTCATGTTCAGTCGTGGCAGCGCGCGTCTGGATCCGCACTTCGAGAAACTGCTGCAGCGCCTGGCCGGCATTCTGGCCAAGGTGGACAACCACCTGATCATCAGCGGGCACACCGATTCCACGCCCTATCGCGGTGTGGTTGGCGGCTACAACAACTGGAACCTGTCCGGCGACCGTGCCCTGCGCGCGCGCAACGTGCTGGTCGAGGCCGGCCTGCCCACCTCCGCCGTGCTCCAGGTGACCGCCCAGGCCGATGGCATGCCGCTGTTGCCGAGCGATCCGCAGAACGGCGCCAACCGCCGCATCGAACTGCTGCTGCTGACCAGCCAGGCCGAAGGCCTGTACCGCGAGCTGTTCGGCGATGCCCAGGTGCGGGTGGACTATCGCGAAGGCGGCGCGCAGTTCAACGCGCCGGGATCGTAG MRKRGGEEHEIIVKRRSKKGGHDEHGGAWKVAFADFTMAMMALFMVLWIIQPQNQQQSRADADQLTNPLVEGGAGIFDGSSRTPLDLDGVPVQVSPRKDRDNQARTPQEDPGATLGEGQPGEPRRPHYAEPGQMQELAELLEQLALQLDAEANIEVQVVPQGLRILIKDDAQRFMFSRGSARLDPHFEKLLQRLAGILAKVDNHLIISGHTDSTPYRGVVGGYNNWNLSGDRALRARNVLVEAGLPTSAVLQVTAQADGMPLLPSDPQNGANRRIELLLLTSQAEGLYRELFGDAQVRVDYREGGAQFNAPGS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0194 CDS 196058 196528 - hypothetical protein YP_001185700.1 146305235 5106874 Unknown[Class 3] ATGAGCCAGTATCCGCAACGCGGCCTGAGCCGCCGCTGGCTGCTGGCGGCCCTGGCCAGCAGCCTGGGTCTGCTGCTGGGCATTCTCAGCCTGTGGCTGAACTTCAAATCCAGTGCCGAGCTCGACGGCCGCTACCACTCCACCGGTCAGGTGCAGCTGAGCAATGGCCAGGTACTCGACCTGAGCCACAACCTGCAGGTGCAGGACGGACGCTTCTACGCCATGACCCGTCAGGGCGACAGCATCCTCGAGACCTCGGGCGAGGTGGAGTACGGTTTCCTCGGCAACTACCGCCTGCGCGTCGAGGACGGCAAGCTGACCGGCCTGTCCAGCGAGGCCGACGACGAGCTGGTGTTCAATCTGCTGTACGGCCGACACAAGGGCTCGACCATCCGCCTGGTGACCTTCCGCAATTGCCTCTACGGCGTGGAAACCCGCCAGGTCTACTGCCCGACGCGGATCCGTCAGTAG MSQYPQRGLSRRWLLAALASSLGLLLGILSLWLNFKSSAELDGRYHSTGQVQLSNGQVLDLSHNLQVQDGRFYAMTRQGDSILETSGEVEYGFLGNYRLRVEDGKLTGLSSEADDELVFNLLYGRHKGSTIRLVTFRNCLYGVETRQVYCPTRIRQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0195 CDS 196525 197358 - transcriptional regulator, CadC YP_001185701.1 146305236 5106875 PFAM: transcriptional regulator domain protein Cytoplasmic Membrane[Class 3] PF00486|Trans_reg_C, Transcriptional regulatory protein, C terminal|47|121|1e-11 COG3710|CadC, DNA-binding winged-HTH domains [Transcription]. ATGAACTCCAGCCCCGAAACAACGGCCGCCGAGCCGGAAAGCAGCATCGCCTGCCTGATCATCAAGACCGGGCGCAACGACTGCTACGCGCACTTCTATCCAGCGCTGTACCAGTTGACCCTGGTTCGCAGTGGCATCGAGGAGAAGATCGACCTCGGCTACTCCGGCAGCCGTCTGCTCGAGCGGCTGGTCCGGGAACCCGGCGAGGTGGTTGCGCGCGAGGAGCTGATGAGCCATGCCTGGGCCGACCGGGTGGTGGGCCAGGGCAGCCTCAACCAGCAGATCTACACCCTGCGCCAGATACTGGGTGACGAGAAGAGTCGCGAAATCATCCAGACCCTGCCGCGCCGCGGCTACCTGCTCAACCCCAGCTACCTGGTCTATCCGCCGAGCATCGACGACATCGGCGCGGTTCAGGAGGCCGACGCCCCCGGCACGCCGCCGAACTTCCTGCATCGGCACAGCCGCCGTCGCACCTCCTGGCTGGTGCTGCTGAGTGCGCTGGGCCTGATGGCCGTGGGGCTGTTCGTCGCGCTCTACCAGTTCAGCCTGCCCGCCCGCCTGCACAGCAGCGAGCTGAATCTGGGCCAGATCAGTCTGCTCTACGTGGATCAGGATGCGCAGCGTCTGCAGCAGCTGATCCTGCAGACCCACGGGCTGGCCAGCCGCCTGTCCGAGCTGAGCGCGGCACCGGCCGAGCTGATCATCGGCAACAGCGGCGGCTTCTTCGAAGTGCTGTGCATGCAGCCGGGCGGCGGTGCCCGTTCGCTGATGTTCCATGAGAGCCAGCTGGCTCATCTCGCCGACGATCAACTGAACCGGTGCCTGCCATGA MNSSPETTAAEPESSIACLIIKTGRNDCYAHFYPALYQLTLVRSGIEEKIDLGYSGSRLLERLVREPGEVVAREELMSHAWADRVVGQGSLNQQIYTLRQILGDEKSREIIQTLPRRGYLLNPSYLVYPPSIDDIGAVQEADAPGTPPNFLHRHSRRRTSWLVLLSALGLMAVGLFVALYQFSLPARLHSSELNLGQISLLYVDQDAQRLQQLILQTHGLASRLSELSAAPAELIIGNSGGFFEVLCMQPGGGARSLMFHESQLAHLADDQLNRCLP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0196 CDS 197677 198576 - flagellin domain-containing protein YP_001185702.1 146305237 5106876 PFAM: flagellin domain protein Two-component system [KEGG] ; Flagellar assembly [KEGG] Flagellar[Class 3] ; Extracellular[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; cellular_component|GO:0009424|flagellin-based flagellum hook|IEA ; molecular_function|GO:0005198|structural molecule activity|IEA TIGR02550|flagell_flgL|flagellar hook-associated protein 3|equivalog|1.9e-22||Cellular processes|Chemotaxis and motility PF00700|Flagellin_C, Bacterial flagellin C-terminus|207|276|9e-15 ; PF00669|Flagellin_N, Bacterial flagellin N-terminus|29|172|4e-31 COG1344|FlgL, Flagellin and related hook-associated proteins [Cell motility and secretion]. ATGGCTCTGTCGATTCATACCAACTACTCCTCGCTGATCACCCAGACCAACCTGTCCAAGACCAACAACGCCCTGGGCACCAACCAGCAGCGTCTGGGCACCGGTTTCCGCATCAACTCCGCTGCCGACGACGCCGCCGGTCTGCAGATCGCCACCCGCCTCAACGCCCAGTCGCGTGGTATGGACGTCGCCATCCGCAACACCAGCGACTCCATCTCCCTGCTGCAGACCGCCGAAGGCGCGCTGACCGAGATGACCGACATCGTCCAGCGCATGAAGGACCTGGCCACCCAGGCCGCCAACGCCACCGCCAGCGAGAAGGACCGCGACGCCCTGCAGGCCGAGTACGACCAGCTGGGTCAGGAGCTGGGCAACATCGTCAAGAACACCAAGTACGCCGGCGAAGGCCTGTTCAGTGACGGCACCACCACCGACGGTACCGGTGGCAAGTTCGGCGCCGCCATGAACTTCCAGATCGGCGCCAGCGCCGCCGAGACCCTGACCCTGGACGTGAGCACCTCCCTGGGTGACCTGGCCACCGCTCTGGACGGCCTGTCCGCCCAGTTCGCCACTCCGGACAGCACCACTCCGGGCACCGAGATCGCCGGCGCCGACACCACTGCCGCCAACGGCATGATCGACACCCTGAGCGACGCCCTGGACTCCATCGGCTCCCTGCGCGCCCAGTTCGGTGCCAACATCAACCGCCTGAACCACACCGCCAACAACCTGAGCAACATGAAGGACAACACCGACATGGCCAAGGGTCGCATCATGGATGCCGACTTCGCCAAGGAAAGCGCCAACATGAGCAAGAACTCCATGCTGCTGCAGTCGGGCATCTCCATGCTCAAGCAAGCCGGCCAGATGCCGGGCATGGTCATGTCCCTGCTGGGCTGA MALSIHTNYSSLITQTNLSKTNNALGTNQQRLGTGFRINSAADDAAGLQIATRLNAQSRGMDVAIRNTSDSISLLQTAEGALTEMTDIVQRMKDLATQAANATASEKDRDALQAEYDQLGQELGNIVKNTKYAGEGLFSDGTTTDGTGGKFGAAMNFQIGASAAETLTLDVSTSLGDLATALDGLSAQFATPDSTTPGTEIAGADTTAANGMIDTLSDALDSIGSLRAQFGANINRLNHTANNLSNMKDNTDMAKGRIMDADFAKESANMSKNSMLLQSGISMLKQAGQMPGMVMSLLG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0197 CDS 198855 199022 - Rubredoxin-type Fe(Cys)4 protein YP_001185703.1 146305238 5106877 PFAM: Rubredoxin-type Fe(Cys)4 protein Cytoplasmic[Class 3] PF00301|Rubredoxin, Rubredoxin|3|49|1e-13 COG1773|COG1773, Rubredoxin [Energy production and conversion]. ATGAAGAAGTGGCAATGCGTGGTCTGTGGACTGATTTACGACGAGAGCCAGGGTTGGCCGGATGACGGCATCGCCCCCGGCACCCGCTGGGAAGACGTGCCGGAAGACTGGCTGTGCCCCGATTGCGGCGTCGGCAAGATGGATTTCGAGATGATCGAGATCGGCTGA MKKWQCVVCGLIYDESQGWPDDGIAPGTRWEDVPEDWLCPDCGVGKMDFEMIEIG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0198 CDS 199140 200840 - L-lactate permease YP_001185704.1 146305239 5106878 PFAM: L-lactate permease Cytoplasmic Membrane[Class 3] biological_process|GO:0015718|monocarboxylic acid transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; molecular_function|GO:0008028|monocarboxylic acid transmembrane transporter activity|IEA TIGR00795|lctP|transporter, lactate permease (LctP) family|subfamily|7.9e-87||Transport and binding proteins|Carbohydrates, organic alcohols, and acids PF02652|Lactate_perm, L-lactate permease|5|552|3e-80 COG1620|LldP, L-lactate permease [Energy production and conversion]. ATGAGTCAAACGCTGCTGTCCATCCTGGCCTTCGTGCCGCTGGTGCTGGCGGGGGTACTGCTGATCGGCTTTCGCTGGCCGGCCAAGTACGCGATGCCGCTGGTGTTCGTCCTCACCGCCCTGATCGGCCTGCTGGCCTGGGACATGTCCCTCAACCGGGTCATCGCCTCCAGTCTGCAGGGGCTGATCCTCACCGCCTCGATCCTGTGGATCATCTTCGGCGCCATCCTGCTGCTCAACACCCTCAAGCATTCCGGTGGCATCGCGGCGATTCGCCGGGGCTTCTCCAACATCAGCCCGGATCGCCGCGTGCAGGCGCTGATCGTCGCCTGGCTGTTCGGCTGCTTCATCGAGGGCGCGTCCGGTTTCGGCACCCCGGCCGCCGTGGCCGCGCCGCTGCTGGTAGCCCTGGGCTTCCCGGCCCTGGCCGCGGTGGTACTGGGGATGATGGTGCAGTCCACCCCGGTGTCCTTCGGTGCGGTGGGTACTCCGATCCTGGTGGGCGTCGGCGCCGGCCTGGACAGAACCGGCATTACCGAGCAACTGGTGGCCACCGGCAGCACCTGGGAAACCTTCTTCCACCTGATCTATTCGCGGGTGGCCATCACCCACGGCCTGATCGGCCTGCTGATGCCGCTGATCATGGTGATGATCATGACGCGCTTCTTCGGCCGCAATCAGAGCTGGAAGGAAGGCCTGGCAGTGGCGCCCTTCGCCATCTTCACCGCCTTCGCCTTCTCCCTGCCGTACATGGCCGCCGGCGTGTTCCTCGGCCCGGAGTTCCCTTCTATGATCGGCGCCCTGGTCGGCCTGGCCATCGTGGTGCCGGCGGCCAAGGCCGGCTTCCTGCTGCCGAAGGAAACCTGGGACTTCGCCGATCCCAGGGACTGGCCAAGCGAGTGGATGGGCAAGATCGAGATGAAGCTGGACGAGGTCGCCGGCAAGACGCCGATCTCGGTGCCCATGGCCTGGGCGCCCTACCTGCTGCTGGCGGTGTTTCTGGTCATCTCGCGGACCTTCCCGCAAGTGAAAGCGGCGCTGATGAGCCTGAGCTTCGGTTGGAAGGACATCCTCGGCGAGACCGGCGTGTCCGGCACCATCGAGCCGCTGTACCTGCCGGGGGGCATCCTGTGCATGGTGGTGCTGGTGACCTTCTTCCTGCATCGCATGCGTCTGTCCGAGCTCAAGGCGGCAGTGGGCGAGTCGAGCAAGACCCTGCTCGGCGCCGGCTTCGTGCTGATCTTCACCATTCCCATGGTGCGCATCCTGATCAACTCGGGGGTCAACGGCGCCGACCTGGTGTCGATGCCGGTGGCCATGGCGCAGCTGGTGGCCGATAGCGTCGGCGGCATCTACCCGTTCTTTGCCCCGGCCGTGGGCGGCCTCGGCGCCTTCATCGCCGGCTCCAACACGGTGTCCAACCTGATGCTGTCGCAATTCCAGTTCAACGCGGCGCAGCTGCTTGGCGTGTCCGGGGCGATGATGGTGGCGCTGCAGTCGGTCGGCGCGGCGGCGGGCAACATGATCGCCATCCACAACGTGGTGGCGGCCTCGGCCACCGTCGGTCTGCTCGGGCGCGAGGGCATCACCCTGCGCAAGACCATCCTGCCGACGCTCTACTACCTGGCCATGGCCGGCGCCATCGCCCTGTTCGCCATGTACGTGATGGGGATCGGCGACCCGCTGCTGGCCAGCCGATAG MSQTLLSILAFVPLVLAGVLLIGFRWPAKYAMPLVFVLTALIGLLAWDMSLNRVIASSLQGLILTASILWIIFGAILLLNTLKHSGGIAAIRRGFSNISPDRRVQALIVAWLFGCFIEGASGFGTPAAVAAPLLVALGFPALAAVVLGMMVQSTPVSFGAVGTPILVGVGAGLDRTGITEQLVATGSTWETFFHLIYSRVAITHGLIGLLMPLIMVMIMTRFFGRNQSWKEGLAVAPFAIFTAFAFSLPYMAAGVFLGPEFPSMIGALVGLAIVVPAAKAGFLLPKETWDFADPRDWPSEWMGKIEMKLDEVAGKTPISVPMAWAPYLLLAVFLVISRTFPQVKAALMSLSFGWKDILGETGVSGTIEPLYLPGGILCMVVLVTFFLHRMRLSELKAAVGESSKTLLGAGFVLIFTIPMVRILINSGVNGADLVSMPVAMAQLVADSVGGIYPFFAPAVGGLGAFIAGSNTVSNLMLSQFQFNAAQLLGVSGAMMVALQSVGAAAGNMIAIHNVVAASATVGLLGREGITLRKTILPTLYYLAMAGAIALFAMYVMGIGDPLLASR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0199 CDS 201068 203245 - malate synthase G YP_001185705.1 146305240 5106879 TIGRFAM: malate synthase GPFAM: malate synthase ; catalyzes the formation of malate from glyoxylate and acetyl-CoA Pyruvate metabolism [KEGG] ; Glyoxylate and dicarboxylate metabolism [KEGG] ; Metabolic pathways [KEGG] 2.3.3.9 Cytoplasmic[Class 3] biological_process|GO:0006099|tricarboxylic acid cycle|IEA ; molecular_function|GO:0004474|malate synthase activity|IEA TIGR01345|malate_syn_G|malate synthase G|equivalog|0|2.3.3.9|Energy metabolism|TCA cycle PF01274|Malate_synthase, Malate synthase|237|699|1e-147 COG2225|AceB, Malate synthase [Energy production and conversion]. ATGACCGAACGCGTGCAATGTCAGCGCCTGCAGGTAGCCGCCGAGCTCAAGCAGTTCATTGAAAGCGAGGTGCTGCCCGGCAGCGGCGTCGAGGCGGCGGCCTTCTGGAGCGGTTTCGATGCGTTGGTACATGACCTGGCGCCGCGTAATCGCGCCCTGCTGGCCGAGCGCGAACGCCTGCAGGCCGAACTCGATGCCTGGCATCGCGCCCATCCCGGCCCGATCACCGACATGAGCGCCTACCGCGCCTTCCTCGAATCCATCGGCTACCTGCTGCCGCAGCCGGAGAAGGTCAAGGTCAGCACTGCCAATGTCGACAGCGAGATCGCCAGCCAGGCCGGCCCGCAACTGGTGGTGCCGGTGATGAACGCACGTTACGCACTGAACGCCGCCAACGCGCGCTGGGGCTCGCTGTACGACGCCCTGTACGGCACCGATGCGATCAACGAAGAGGGTGGTGCCAGCAAGGGGCCGGGCTACAACGAAGTACGCGGCGCCAAGGTGATCGCCTTCGCCCGCGCCTTTCTCGACCAGGCCGCGCCGCCGGCCCAGGGCTCGCACGCCGACGCCAGCGCCTATGCCGTGGTCGCCGGCCAGCTGCAGGTAACCCTCAGCAGCGGCGCGCAGACTTCCCTGGCGCAGCCGGAGAAGTTCGTCGGTTTCCAGGGCGAGGCCGCCGCACCCAGCGCCGTGCTGCTGAAGAACAACGGCCTGCACGTCGAGATCCAGATCGACCCGGCCAGCCCCATCGGCCGCACCGACGCCGCCGGCGTGAAGGACCTGCTGATGGAAGCGGCGCTGTCCACCATCATGGACTGCGAAGACTCGGTGGCCGCCGTCGATGCCGCCGACAAGGTGCTGGTCTACCGCAACTGGCTGGGCCTGATGAAGGGTGACCTGGCCGAGGAGCTGGACAAGGGCGGCAAGCGCATCGTCCGCCGCCTCAACGCCGATCGCGTCTACACCGCCGCCGACGGCAGCGAACTGACCCTGCACGGCCGCTCGCTGCTGTTCGTGCGCAACGTCGGCCACCTGATGAGCAACCCGGCGATCATCGATGGCGAAGGCCATGAGATTCCCGAGGGTATTCTCGATGCCGTGGTCACCAGCCTGATCGCCCTGCACGACCTCAAGCGCCGCGGCAACTCGCGCACCGGCAGCGTCTATATCGTCAAGCCGAAGATGCACGGCCCGTTCGAAGTGGCCTTCGCCAACGAGCTGTTCGGTCGCGTCGAACAGCTGCTGGGCATGCCGGCCAATACCCTGAAGATGGGCATCATGGACGAGGAGCGGCGCACCAGCGTCAACCTCAAGGCCTGCATCGAGGCCGCCAGCGCGCGGGTGGCCTTCATCAACACCGGCTTTCTCGACCGCACCGGTGACGAGATGCACACGGCCATGGAAGCCGGCGCCATGCTGCGCAAGGGCGACATGAAATCCAGCGCCTGGATCGCCGCCTACGAGCGCAACAACGTGCTGGTCGGCCTGGCCTGCGGGCTACGCGGCAAGGCGCAGATCGGCAAGGGCATGTGGGCCATGCCGGACCTGATGGCGGCCATGCTCGAACAGAAGATCGGCCATCCGAAAGCCGGCGCCAATACCGCCTGGGTGCCGTCGCCGACCGCCGCCGTGCTGCATGCCCTGCACTACCACCAGGTCGACGTGCAGGCGGTGCAGAGCGAGCTGGAGCGGATCGACCTGGCCAGCCAGCGCGACAGCCTGCTGGGTGACCTGCTAAGCGTACCGGTCAGCGCGGAAAGGCCGTGGAGCGCCAGCGATATCCAGCAGGAGCTGGACAACAACTGCCAGGGCATCCTCGGTTACGTGGTGCGCTGGGTCGAGCAGGGCGTCGGCTGCTCCAAGGTGCCGGACATTCACAACGTCGGCCTGATGGAAGACCGCGCCACCCTGCGCATCTCGGCTCAGCACATCGCCAACTGGCTGCACCACGGTGTGGTCAGCGAGGCCCAGGTGCGCGAGACCCTGCAGCGCATGGCGCAGGTGGTGGACGGGCAGAACGCCGGCGATCCGGCCTACCGGCCGATGGCGCCGAACTTCGAGCAATCCCACGCCTTCCGCGCCGCCTGCGACCTGGTGTTCAAGGGTCGCGAGCAGCCGTCCGGTTACACCGAGCCGCTGCTGCATGCCTGGCGGCTGCGCTTCAAGAAGGAGGCGTGA MTERVQCQRLQVAAELKQFIESEVLPGSGVEAAAFWSGFDALVHDLAPRNRALLAERERLQAELDAWHRAHPGPITDMSAYRAFLESIGYLLPQPEKVKVSTANVDSEIASQAGPQLVVPVMNARYALNAANARWGSLYDALYGTDAINEEGGASKGPGYNEVRGAKVIAFARAFLDQAAPPAQGSHADASAYAVVAGQLQVTLSSGAQTSLAQPEKFVGFQGEAAAPSAVLLKNNGLHVEIQIDPASPIGRTDAAGVKDLLMEAALSTIMDCEDSVAAVDAADKVLVYRNWLGLMKGDLAEELDKGGKRIVRRLNADRVYTAADGSELTLHGRSLLFVRNVGHLMSNPAIIDGEGHEIPEGILDAVVTSLIALHDLKRRGNSRTGSVYIVKPKMHGPFEVAFANELFGRVEQLLGMPANTLKMGIMDEERRTSVNLKACIEAASARVAFINTGFLDRTGDEMHTAMEAGAMLRKGDMKSSAWIAAYERNNVLVGLACGLRGKAQIGKGMWAMPDLMAAMLEQKIGHPKAGANTAWVPSPTAAVLHALHYHQVDVQAVQSELERIDLASQRDSLLGDLLSVPVSAERPWSASDIQQELDNNCQGILGYVVRWVEQGVGCSKVPDIHNVGLMEDRATLRISAQHIANWLHHGVVSEAQVRETLQRMAQVVDGQNAGDPAYRPMAPNFEQSHAFRAACDLVFKGREQPSGYTEPLLHAWRLRFKKEA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0200 CDS 203399 203839 - hypothetical protein YP_001185706.1 146305241 5106880 PFAM: protein of unknown function DUF336 Unknown[Class 3] PF03928|DUF336, Domain of unknown function (DUF336)|20|146|4e-30 COG3193|GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol [General function prediction only]. ATGAGAGGCGGGGGGAGAACAGCCAAACACACGAGGTATGCCATGCAACACAAAGCCGTACTCAGCCAGCGCGAAGTCAGCCAGATCCTCCAGGCGGCCCGCAGCGAAGCGCAGCAACAGGGCTGGGCCGTGGCCATCGCCGTGGTCGACGACGGCGGCCACCCACTGGCCCTGGAACGCCTCGACGGCTGCGCGCCGATCGGCGCCTATATCGCCACCGAAAAGGCGCGCAGCGCCGCCCTCGGCCGCCGCGAAACCAAGGGCTACGAGGACATGGTCAACGGCGGCCGCACCGCCTTCGTCAGCGCGCCGCTGCTGACTTCGCTGGAGGGCGGCGTGCCGCTGCTGGTGGACGGCCAGGTGATCGGCGCGGTGGGCGTGTCCGGGGTCAAGGCCGAACAGGACGCGCAGGTGGCCAGGGCGGGGATCGCAGCCCTTTAA MRGGGRTAKHTRYAMQHKAVLSQREVSQILQAARSEAQQQGWAVAIAVVDDGGHPLALERLDGCAPIGAYIATEKARSAALGRRETKGYEDMVNGGRTAFVSAPLLTSLEGGVPLLVDGQVIGAVGVSGVKAEQDAQVARAGIAAL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0201 CDS 203876 205093 - glcF glycolate oxidase iron-sulfur subunit YP_001185707.1 146305242 5106168 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein ; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein Glyoxylate and dicarboxylate metabolism [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic Membrane[Class 3] biological_process|GO:0006071|glycerol metabolic process|IEA ; cellular_component|GO:0009331|glycerol-3-phosphate dehydrogenase complex|IEA ; molecular_function|GO:0051536|iron-sulfur cluster binding|IEA TIGR03379|glycerol3P_GlpC|glycerol-3-phosphate dehydrogenase, anaerobic, C subunit|equivalog|3.4e-07|1.1.99.5|Energy metabolism|Anaerobic PF02754|CCG, Cysteine-rich domain|324|386|6e-10 COG0247|GlpC, Fe-S oxidoreductase [Energy production and conversion]. GTGCAGACCAACCTGAGTGAACAAGCCAAACGTCTGCCACGCGCCGAGGAAGCCGAGCGGGTGCTGCGCTCCTGCGTGCACTGCGGCTTCTGCAACGCCACCTGCCCGACCTACCAGTTGCTCGGCGACGAGCTGGACGGTCCGCGCGGGCGCATCTACCTGATCAAGCAGATGCTCGAAGGCGGCGAAGTGACCGCCAAGACCCAGCAGCACCTGGATCGCTGCCTGACCTGTCGCAACTGCGAAACCACCTGCCCCTCCGGCGTGCAGTACCACGACCTGCTGGATATCGGCCGCGAGCTGGTCGAACTCACGGTACCGCGGCCGCCGAGCCAACGCCTGCTGCGCCAGGGCCTGCGCGCCGTGGTGCCGCGCCCGGCGCTGTTCAAGGCGCTGACCCAGACCGGTCTGGCCCTGCGCCCGCTGCTGCCGGCCGCGCTCAAGGCCAAGCTGCCGCGCGAGGTTCGTCCGGCCAAGCCGCGCCCGACGCAGCAGCATGCCCGCCGCGTGCTGATGCTCGAAGGCTGCGTGCAGCCGGGGCTGTCGCCCAACACCAACGCCGCCACCGCGCGCGTGCTGGATCGTCTGGGCATCAGCGTCACGCCGATTCGCGAGGCGGGCTGCTGCGGCGCCGTGGACTACCACCTCAACGCCCAGGAAGCCGGGTTGCAACGCGCGCGGCAGAACATCGACGCCTGGTGGCCGGCCATCGAGGCCGGCGCCGAGGCCATCGTGCAGACCGCCAGCGGCTGCGGCGCCTTCGTCAAGGACTACGGCCACCTGCTCGCCAGCGACCCCGCCTATGCGAGCAAGGCGGCGCGGGTCAGCGCCCTGGCCAAGGACCTAGTCGAGGTGCTGCAAGGCGAGCCGCTGGAGCAGTTGCAGGTGCGCGCCGAGCAGCGCCTGGCCTTCCACTGCCCCTGCACCCTGCAGCATGCGCAGAAGCTCGGCGGTGCGGTGGAGGGCGTGCTGACGCGCCTCGGTTTCGGCCTCACCGCCGTGCCGGACGGCCATCTGTGCTGCGGCTCGGCCGGCACCTATTCGCTGACCCAGCCGGCGCTGTCGCGGCAGCTGCGCGACAACAAGCTCAACGCCCTGGAAAGCGGCAAACCCGACGCCATCGTCACCGCCAATATCGGCTGCCAGACCCTTCTGGACGGCGCCGGACGTACGCCGGTGCGGCACTGGATCGAGATCGTCGAAGAGGCGATGGCGTGA MQTNLSEQAKRLPRAEEAERVLRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQMLEGGEVTAKTQQHLDRCLTCRNCETTCPSGVQYHDLLDIGRELVELTVPRPPSQRLLRQGLRAVVPRPALFKALTQTGLALRPLLPAALKAKLPREVRPAKPRPTQQHARRVLMLEGCVQPGLSPNTNAATARVLDRLGISVTPIREAGCCGAVDYHLNAQEAGLQRARQNIDAWWPAIEAGAEAIVQTASGCGAFVKDYGHLLASDPAYASKAARVSALAKDLVEVLQGEPLEQLQVRAEQRLAFHCPCTLQHAQKLGGAVEGVLTRLGFGLTAVPDGHLCCGSAGTYSLTQPALSRQLRDNKLNALESGKPDAIVTANIGCQTLLDGAGRTPVRHWIEIVEEAMA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0202 CDS 205097 206152 - glcE glycolate oxidase FAD binding subunit YP_001185708.1 146305243 5106169 PFAM: FAD linked oxidase domain protein Glyoxylate and dicarboxylate metabolism [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic[Class 3] biological_process|GO:0005975|carbohydrate metabolic process|IEA ; molecular_function|GO:0008891|glycolate oxidase activity|IEA TIGR00387|glcD|glycolate oxidase, subunit GlcD|equivalog|5.6e-06||Energy metabolism|Other PF01565|FAD_binding_4, FAD binding domain|13|137|4e-20 COG0277|GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]. ATGCAGCAGGATTTCGACGCCAGCGCCGCGCTGCTGGAACAGGTCAACCACGCGCTGAACAGCGCCACGCCGCTGCGCATCCAGGGCAGCGGCAGCAAGGCCCATCTGGGTCGCGCCACCCCGGGCGAAGTGCTGGACACCCGTCAGCATCGCGGCATCGTCAGCTATGACCCCACCGAGCTGGTGCTCACCGCCCGTGCCGGGACGCCGCTGGCCGAGATCGAGTCGGCGCTGGAGGCGAACAACCAGATGCTGCCGTGCGAGCCGCCGCACCTGGGCGATGGCGCCACCCTGGGTGGCATGGTCGCCGCCGGGCTGTCCGGCCCGCGCAGGCCCTGGGCCGGTTCGGTGCGCGACCAGGTGCTCGGCACCCGCGTGATCACCGGCCAGGGCAAGCTGCTGCGCTTCGGCGGCGAGGTGATGAAGAACGTCGCCGGTTACGACCTGTCGCGCCTGATGGCCGGCAGCTTCGGCTGCCTCGGCCTGCTCGCCGAGGTGTCGCTCAAAGTGCTGCCCAAACCGCGTCAGGTGCTCAGCCTGCGCCTGGTAATGGACGCTCAGCAGGCGCTGAACAAGCTCGCCGAATGGGGGCAGCAGCCGCTGCCGATCAGCGCGGCCAGCCATGACGGTGCGGCGCTGCATCTGCGCCTGGAAGGCGGCGAAGGCTCGGTTCTGGCCGCGCGCCAACGCCTGGGCGGCGAGGAGATCGACAACGCTTACTGGTATGAGCTGCGCGAGCAGCGCCTGCCGTTCTTCGCCGGCGAAGGCACGCTGTGGCGGCTGTCATTGCCGCTGAACAGCGCTCTGCTCGTCCTGCCCGGCCGCCAGCTGATCGACTGGGGCGGCGCGCAGCGCTGGCTGAAGTCCGATGCCGACGGCGAACTGATCCAGCGCGTGGCCGCCAAGCTCGGCGGCCACGCCACCTGCTTCGCCGCCGGCCAGACGCAACCCTTCCAGCCGCTGGCGGCGCCGCTACTGCGCTACCAGCGCCAGCTGAAGAACCAGCTCGACCCCCAGGGCATCTTCAACCCTGGCCGCCTATACGCCGAGGTATAA MQQDFDASAALLEQVNHALNSATPLRIQGSGSKAHLGRATPGEVLDTRQHRGIVSYDPTELVLTARAGTPLAEIESALEANNQMLPCEPPHLGDGATLGGMVAAGLSGPRRPWAGSVRDQVLGTRVITGQGKLLRFGGEVMKNVAGYDLSRLMAGSFGCLGLLAEVSLKVLPKPRQVLSLRLVMDAQQALNKLAEWGQQPLPISAASHDGAALHLRLEGGEGSVLAARQRLGGEEIDNAYWYELREQRLPFFAGEGTLWRLSLPLNSALLVLPGRQLIDWGGAQRWLKSDADGELIQRVAAKLGGHATCFAAGQTQPFQPLAAPLLRYQRQLKNQLDPQGIFNPGRLYAEV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0203 CDS 206152 207651 - glycolate oxidase subunit GlcD YP_001185709.1 146305244 5106170 TIGRFAM: glycolate oxidase, subunit GlcDPFAM: FAD linked oxidase domain protein ; TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein Glyoxylate and dicarboxylate metabolism [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic[Class 3] biological_process|GO:0005975|carbohydrate metabolic process|IEA ; molecular_function|GO:0008891|glycolate oxidase activity|IEA TIGR00387|glcD|glycolate oxidase, subunit GlcD|equivalog|1.8e-254||Energy metabolism|Other PF02913|FAD-oxidase_C, FAD linked oxidases, C-terminal domain|230|470|2e-62 ; PF01565|FAD_binding_4, FAD binding domain|56|195|1e-30 COG0277|GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]. ATGAGCATTCTGTACGACGAGCGCATCGACGGCGCGCTACCCAAGGTCGACAAGGCCGCGCTGCTGGCCGAGTTGCACCAGCGCCTGCCCGACCTCGACATCCTGCATACCCAGGAAGACCTCAAGCCCTACGAGTGCGACGGCCTGTCCGCCTATCGCACCACGCCCATGCTGGTGGTGCTGCCCGAGCGCATCCAGCAGGTGCAGCAACTGCTGCAGATCTGCCATGCCCGCGCCGTGCCGGTGGTGGCGCGCGGCGCCGGCACCGGTCTGTCCGGCGGCGCGCTGCCGCTGGAGCAGGGCATCCTGCTGGTGATGGCGCGCTTCAACCAGATTCTCGAGATCAACCGCGAAGGCCGCTTCGCCCGCGTCCAGCCCGGCGTGCGCAACCTGGCGATCTCCCAGGCCGCGGCGCCCTTCGACCTCTATTACGCGCCGGACCCCTCGTCGCAGATCGCCTGTTCCATCGGTGGCAACGTCGCCGAAAACGCCGGCGGCGTGCACTGCCTGAAGTACGGCCTGACCGTGCACAACCTGCTCAAGGTCGACATTCTCACCGTCGAAGGCGAGTTCATGACCCTCGGCAGCGACGCCCTGGACACGCAGGGGTTCGACCTGCTGGCGCTGTTCACCGGCTCCGAGGGCATGCTCGGCATCGTTACCGAGGTGACGGTCAAGCTGCTGCCCAAGCCGCAGGTGGCCAAGGTCCTGCTGGCGGCCTTCGACTCGGTGGAAAAGGCCGGTCGCGCAGTCGGCGACATCATCGCCGCCGGCATCATCCCCGGCGGGCTGGAGATGATGGACAACCTGGCGATCAGGGCGGCGGAGGACTTTATCCACGCCGGCTATCCGGTGGAGGCCGAGGCCATCCTACTGTGCGAGCTGGACGGCGTGGAAGCCGACGTGGCCGACGACTGCGAGCGGGTGCGCGCGGTGCTGACGAAGGCCGGCGCCATCGAAGTGCGCCAGGCGCGCGACGAGGCCGAGCGGGTGAAGTTCTGGGCCGGGCGCAAGAACGCCTTCCCCGCGGTCGGGCGCATCTCGCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGAGCTGCCCGGCGTGCTGCGCGGCATCGCCGAATTGTCCGCCGAATACGGCCTGCGCGTGGCCAACGTGTTCCACGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCGATGCCAACGTGCCCGGCGAGCTGGAGCGGGCCGAAGCCATCGGCGGCAAGATCCTCGAACTCTGCGTCAAGGTCGGCGGCAGCATCACCGGCGAGCACGGCGTGGGCCGCGAGAAGATCAACCAGATGTGCGCGCAGTTCAACAGCGACGAAATCACCCTGTTCCATGCGGTGAAGGCGGCGTTCGACCCGGCCGGCCTGCTCAACCCGGGCAAGAACATCCCCACCCTGCACCGCTGCGCCGAGTTCGGCGCCATGCACGTGCACCACGGCCAACTGCCCTTCCCGGAACTGGAGCGTTTCTGA MSILYDERIDGALPKVDKAALLAELHQRLPDLDILHTQEDLKPYECDGLSAYRTTPMLVVLPERIQQVQQLLQICHARAVPVVARGAGTGLSGGALPLEQGILLVMARFNQILEINREGRFARVQPGVRNLAISQAAAPFDLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKVDILTVEGEFMTLGSDALDTQGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVAKVLLAAFDSVEKAGRAVGDIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVEAEAILLCELDGVEADVADDCERVRAVLTKAGAIEVRQARDEAERVKFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPGVLRGIAELSAEYGLRVANVFHAGDGNMHPLILFDANVPGELERAEAIGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPAGLLNPGKNIPTLHRCAEFGAMHVHHGQLPFPELERF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0204 CDS 207891 208664 + DNA-binding transcriptional regulator GlcC YP_001185710.1 146305245 5106171 PFAM: regulatory protein GntR, HTH ; PFAM: regulatory protein GntR, HTH; GntR domain protein Cytoplasmic[Class 3] PF00392|GntR, Bacterial regulatory proteins, gntR family|13|75|3e-09 ; PF07729|FCD, FCD domain|100|231|1e-16 COG2186|FadR, Transcriptional regulators [Transcription]. ATGGATGCGAAACAGGGCGCCGCACGACGCCAGGTGAGTGATGTGGTGGCCGAGCGAATCGAGCGGCTGATCGTCGATGGCGTGCTCAAGGTAGGCCAGCCGCTGCCCTCGGAGCGGCGCCTGTGCGAGAAGCTGGGCATCTCCCGTTCGGCGCTGCGTGAAGGGCTCAAGGTGCTGCGCGGGCGCGGCATCATCGAGACCGCGCAGGGCCGCGATTCACGCGTGGCCAAGCTCAGCGGCGAGCGCGACGCCAGCCCGCTGATGCACCTGTTCAACTCGCAGCCGCGCACCCTGTATGACCTGCTGGAGGTGCGCGGCCTGCTCGAAGGCGAGTCGGCGCGCCTGGCCGCGCTGCGCGGCACCGAGGCGGATTTCGTGCTGTTGACGCGGCGTTATGAAGAGATGCTGGCGGCCCATGCGCAGGAAAATCCGGTGGACCCGCGCGAGCATGCGCGCCTCGACCACGCCTTCCACCTGGCCATCTGCGAGGCCTCGCACAACCCGGTGCTGGTGCACACCCTGCAGTCGCTGACCGACCTGATGCTCAGCACCGTGTTCGCCTCGGTGAACAACCTCTACCACCGCCCGGCGCAGAAGCGGCAGATCGACCGCCAGCACTCGCGCCTGTATCACGCGGTGATCGAGCGCCTGCCGGAACAGGCGCAGCGCGCCGCGCGCGACCATATCCACAGCATCCGCGACAACCTGCAGGAGATCGAGCAGGAAGAGCAGCGCCTGGTGCGCGCCACCATGCGCCTGGAAGGCTGGGCGTAG MDAKQGAARRQVSDVVAERIERLIVDGVLKVGQPLPSERRLCEKLGISRSALREGLKVLRGRGIIETAQGRDSRVAKLSGERDASPLMHLFNSQPRTLYDLLEVRGLLEGESARLAALRGTEADFVLLTRRYEEMLAAHAQENPVDPREHARLDHAFHLAICEASHNPVLVHTLQSLTDLMLSTVFASVNNLYHRPAQKRQIDRQHSRLYHAVIERLPEQAQRAARDHIHSIRDNLQEIEQEEQRLVRATMRLEGWA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0205 CDS 208742 209587 - SAF domain-containing protein YP_001185711.1 146305246 5106172 PFAM: SAF domain Unknown[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; cellular_component|GO:0009428|flagellin-based flagellum basal body, distal rod, P ring|IEA ; molecular_function|GO:0005198|structural molecule activity|IEA TIGR03170|flgA_cterm|flagella basal body P-ring formation protein FlgA|equivalog_domain|4.6e-44||Cellular processes|Chemotaxis and motility PF08666|SAF, SAF domain|158|216|2e-05 COG1261|FlgA, Flagellar basal body P-ring biosynthesis protein [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones]. GTGCCCAACCTTCAAGAGAGCAGCAGGCCTTTGATTTATCAGGATTTTCTCGGAGCTCACGGCGCTCTTCGCGTCGCCCTGCTTCCGCATCGGCGCAGCCGGGAGCGGAAAAGCGGAAAGGTTTTTTCCGCCTGCGCGCTGGCGCTCTTCCTCTTCGCCCTGCTGCCATCGGCCGTCTTGCGTGCCGAGGTGGAGGCCGCCGGCCAGATCGACCAGGCGATTGCCGCGCACATGCAGCAGCAGCTCGCCGCCGAGGCCAAACGTCAGGCCTGGCAGGGCATGCGCCACAGCCTCGGCATCACGCTGCTGAGCAGCGCCGAGCAGCTGCCGGCCTGCAGCCAGGCACTGGAGCTGACGGTCGCCAGCGACGACCCGTCGCCCCTGGCGCGTCAGCGCCTGCAGCTGCGCTGCGCCGACGCGCCGGGCTGGACCCGAGTGGCGCTGGTGCAGGCCAGCGTGTTCGTGGCCGCGGTGCATGCCGCACGGGTGATCGAGCGCGGCCAGACCATCGCCGCCGAGCAGGTGCAGCTGCAGGAAGTGAATGTCGGCAGAAGCTCACGCGGCTTCTACAGCAGCCTCGACGAGGTGGTTGGCCAGGGCGCCAAGCGCCGCATCCGCGCCGGCGCGCTGATCGCCCCGAGCCTGCTGAGCGCACCGCTGCTGGTGCGCCGCGGCCAGCAGGTGACCATCGTCGCCAACCAGGACGGCATCTCCGCCTCGGCCACCGGCGAGGCGCTGGGCAACGGCCGCGAGGGTGAGGTGATCCGCGTGCGCAACCTCGGCAGCCAGAAGGTGATCGAGGCGCAGGTGGTGGAAGAAGGCGTGGTGACCAGCACCTTCAGGTAG MPNLQESSRPLIYQDFLGAHGALRVALLPHRRSRERKSGKVFSACALALFLFALLPSAVLRAEVEAAGQIDQAIAAHMQQQLAAEAKRQAWQGMRHSLGITLLSSAEQLPACSQALELTVASDDPSPLARQRLQLRCADAPGWTRVALVQASVFVAAVHAARVIERGQTIAAEQVQLQEVNVGRSSRGFYSSLDEVVGQGAKRRIRAGALIAPSLLSAPLLVRRGQQVTIVANQDGISASATGEALGNGREGEVIRVRNLGSQKVIEAQVVEEGVVTSTFR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0206 CDS 209639 209992 + flagellar basal-body rod protein FlgB YP_001185712.1 146305247 5106173 TIGRFAM: flagellar basal-body rod protein FlgB Flagellar assembly [KEGG] Flagellar[Class 3] ; Periplasmic[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; cellular_component|GO:0009429|flagellin-based flagellum basal body, proximal rod|IEA ; molecular_function|GO:0005198|structural molecule activity|IEA TIGR01396|FlgB|flagellar basal-body rod protein FlgB|equivalog|5.3e-25||Cellular processes|Chemotaxis and motility COG1815|FlgB, Flagellar basal body protein [Cell motility and secretion]. ATGAGTATACGGATTGATGACGTGGTGGGCCTGCATAGCCGCGCCCTCGAACTGCGCATGCAGCGCAGCGAGATTCTCGCGGCCAACCTGGCCAACGAGGACACCCCGGGCTTTCTCGCCCGCGACATCGACTTCGCCGGCGAGATGCAGCGGCTCGACCCGCAGCAGCGTTTCGCCGCCAGCAGCGCGGAGCTCAAGTACCGCGTGCCGACCCAGCCGTCGCAGGACGGCAACAGCGTCGAGCTGAGTGTGGAGCAGGCCGCGTTCTCCAAGAACGCCATGGACTTCCAGACCAGCCTGACCTTTCTCAGCATGAAATTTCGCGGCCTGAAACAGGCCATCGAGGGGCGTTGA MSIRIDDVVGLHSRALELRMQRSEILAANLANEDTPGFLARDIDFAGEMQRLDPQQRFAASSAELKYRVPTQPSQDGNSVELSVEQAAFSKNAMDFQTSLTFLSMKFRGLKQAIEGR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0207 CDS 209995 210423 + flgC flagellar basal body rod protein FlgC YP_001185713.1 146305248 5106174 TIGRFAM: flagellar basal-body rod protein FlgC ; with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the lateral flagella Flagellar assembly [KEGG] Flagellar[Class 3] ; Periplasmic[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; cellular_component|GO:0009425|flagellin-based flagellum basal body|IEA ; molecular_function|GO:0005198|structural molecule activity|IEA TIGR01395|FlgC|flagellar basal-body rod protein FlgC|equivalog|3e-44||Cellular processes|Chemotaxis and motility COG1558|FlgC, Flagellar basal body rod protein [Cell motility and secretion]. ATGGCTTTCGACTCCATCTACCGCATCGCCGGTTCGTCGATGAACGCGCAGACCGTGCGCCTCAACACCGTGGCCAGCAACCTGGCCAACGCCGACTCGGCGGCGGCCAAGGCCGAGGACGTGTACCAGGCGCGCAAGCCGGTGTTCGCCGCCGTCTACAACAACGACGAGCTGACCCGCGGCGTGGGCATGGGCGGCGCCCATGTGCAGGTGCTCGACGTGGTCACCGCCGGCCGCGAGCCGGTGCGCCGCTACGAGCCGGACAATCCCCTGGCCGATGACCAGGGCTACGTGTTCTACGCCGACATCGACCAGATCGAGGAAATGACCGACATGATGTCGGCCACCCGCAGCTTCGAGACCAGCGTGGAAGTGCTCAATCGCCTGAAAAGCATGCAGCAGGGCCTGCTCAAGCTCGGAGAATCCTGA MAFDSIYRIAGSSMNAQTVRLNTVASNLANADSAAAKAEDVYQARKPVFAAVYNNDELTRGVGMGGAHVQVLDVVTAGREPVRRYEPDNPLADDQGYVFYADIDQIEEMTDMMSATRSFETSVEVLNRLKSMQQGLLKLGES Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0208 CDS 210423 211100 + flgD flagellar basal body rod modification protein YP_001185714.1 146305249 5106175 PFAM: flagellar hook capping protein ; acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production Flagellar assembly [KEGG] Fimbrial[Class 3] ; Extracellular[Class 3] PF03963|FlgD, Flagellar hook capping protein|1|137|1e-25 COG1843|FlgD, Flagellar hook capping protein [Cell motility and secretion]. ATGACCGCGGTCAGCAACAACAGCCAGAACAACCCCGTCTACGGCATCGACGAGGCGGTCAAGCAGGCGGTCAACGTCAGCGACGCGACCCAGCTGGAAAACAACTTCCTCACCCTGATGGTCGCGCAGATCCAGAACCAGGACCCGACCAAGCCGGTGGACAGCACCGAGTTCCTCAACCAGTTCGCCGCCATGAGTCAGGTCAAGAGCCTGGAGAACATGGCCTCGCTGAGCAAGAGCAACCTGGTGCTGCTGGACAACCTGCAGACCCTCACCGCCGCCGGCCTGGTCGGCCAGGAGGTCAAGGTGGCCACCGAGAAGCTGGAGCTGGGCGCGGACAAGGTCAAGGGCGAGGTCAACCTCGAGCATGCCGCCGGCAAGCTGACCCTGGTGGTCACCGACAGCAACGGCGTGAAGAAGGAGATCGCCCTCGGCTCCCAGGCGCCGGGACGCGTGCCCTTCGAGCTGGACCCCAAGGCTCTGGGCCTGGCGCCGGGCAGCTACAAGGTCGAGGTGCAGAGCGACAGCGGCGAGTACCCCAAGGTGGAGGTGGCCGGCCGCGTCACCCAGGTGCGCGTTAGCGCCGAAGGCCCGGTGCTGGAGATCGTCGGCATCGGCTCGGTGCCTTTCTACAACATCACCGAATTCGGCCAGACGCAGACCGTCGGTCTGCTCTGA MTAVSNNSQNNPVYGIDEAVKQAVNVSDATQLENNFLTLMVAQIQNQDPTKPVDSTEFLNQFAAMSQVKSLENMASLSKSNLVLLDNLQTLTAAGLVGQEVKVATEKLELGADKVKGEVNLEHAAGKLTLVVTDSNGVKKEIALGSQAPGRVPFELDPKALGLAPGSYKVEVQSDSGEYPKVEVAGRVTQVRVSAEGPVLEIVGIGSVPFYNITEFGQTQTVGLL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0209 CDS 211137 212324 + flagellar basal body FlaE domain-containing protein YP_001185715.1 146305250 5106176 PFAM: flagellar basal body rod protein ; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein Flagellar assembly [KEGG] Flagellar[Class 3] ; Extracellular[Class 3] TIGR03506|FlgEFG_subfam|fagellar hook-basal body proteins|subfamily|2.2e-125||No Data|No Data PF06429|DUF1078, Domain of unknown function (DUF1078)|356|391|3e-07 ; PF07559|FlaE, Flagellar basal body protein FlaE|168|276|7e-25 COG1749|FlgE, Flagellar hook protein FlgE [Cell motility and secretion]. ATGAGTTTCAACATCGCCATGACCGGCCTCAGTGCCGTCAACGAACAGCTCAACACCATCAGCCACAACATCGCCAATGCCGGCACCACCGGCTTCAAGTCGTCGCGCACCGAGTTCGGCAGCATCTATGCCGACAGCCAGGCGATGGGCGTGGAAGTGCTGGCCACCACCCAGAGCATCAGCCAGGGTGGCTCCCTGGTGACCACCGGGCGCAGCCTGGACCTGGCCATCTCCGGCGGCGGCTTCTTCGTCACCCGCGGCAGCAACGGTGACGTCAGCTACACCCGCGCCGGCGTGTTCGGTGCCGACAAGGACAACTACATCGTCAACGCCGCCGGCCTGAAGCTGCAGGGCTATCCGGTGGACGCCGCCGGCAACCTGCTGGTCGGCGCCATGGGCGACCTGCAGCTGCAGAACGCCAACCTGCCGGCGCGCGCCACCGACAGCCTGGCCTTCGTCATGAACCTGGATTCCAACCAGAGCGTGCCGACCGCTGCGCCCTTCGATCCGGCGGACGTCAACACCTACAACTCCACCTACACCACCAAGGTGTTCGACTCCCAGGGCAAGGAACACACCCTGACCCAGTACTTCGTCAAGACCGGCGACAACGCCTGGGAAGCCCACTACTACGCCGACGGCGCCGCCGTCGGTGGCCCGCAGGCGCTGACCTTCGGCACCAACGGCAGCCTCACCGCGCCGGTCGGTCCGGTGGCCGTCGGCTTCCCGCTGCCGGGTGTCGATCCGATGAACATCGCCATCGACTACAGCAACTCCAGCCAGTACGGCTCCGACTTCGTCGTCACCAGCAACCGCGCCAGCGGCTACGCGGCCGGCGAGCAGACCGGCCTGTCGGTGGAGAAGGACGGCATGGTCTACGCCAACTACAGCAACGGCCAGCGCATGCTGCAGGGCCAGGTGGCGCTGGCCACCTTCGCCAACGCCGGTGGCCTGAAGAACGTCAGCGGCACGGCCTGGGTGGAAAGCGCCGAGTCCGGCGCGGCGCTGATCGGCGTGCCCGGCGTCGGCCCGTTCGGCGAGCTGGTGGCCGGTTCGCTGGAGAACTCCAACGTCGACCTGACCCAGCAGCTGGTCGGCCTGATGGAGGGCCAGCGCAACTACCAGGCCAACACCAAGGTGCTGACCACCAACAAGGAACTCACCCAAGTGCTGTTCGGCGCGATCTGA MSFNIAMTGLSAVNEQLNTISHNIANAGTTGFKSSRTEFGSIYADSQAMGVEVLATTQSISQGGSLVTTGRSLDLAISGGGFFVTRGSNGDVSYTRAGVFGADKDNYIVNAAGLKLQGYPVDAAGNLLVGAMGDLQLQNANLPARATDSLAFVMNLDSNQSVPTAAPFDPADVNTYNSTYTTKVFDSQGKEHTLTQYFVKTGDNAWEAHYYADGAAVGGPQALTFGTNGSLTAPVGPVAVGFPLPGVDPMNIAIDYSNSSQYGSDFVVTSNRASGYAAGEQTGLSVEKDGMVYANYSNGQRMLQGQVALATFANAGGLKNVSGTAWVESAESGAALIGVPGVGPFGELVAGSLENSNVDLTQQLVGLMEGQRNYQANTKVLTTNKELTQVLFGAI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0210 CDS 212334 213065 + flagellar basal-body rod protein FlgF YP_001185716.1 146305251 5106177 TIGRFAM: flagellar basal-body rod protein FlgFPFAM: flagellar basal body rod protein ; TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein Flagellar assembly [KEGG] Periplasmic[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; molecular_function|GO:0005198|structural molecule activity|IEA TIGR02490|flgF|flagellar basal-body rod protein FlgF|equivalog|3.6e-77||Cellular processes|Chemotaxis and motility COG4787|FlgF, Flagellar basal body rod protein [Cell motility and secretion]. ATGGACCGTCTCGGCTACACCGCAATGACCGCCGCCAGCCGCACCATGAGTTCGCTCACGGTGCGCGCCAACAACCTGGCCAACGTCAATACCCCCGGCTTTCGCGCCGACCTGGAACAGGCCCAGGCCGTGGCCGTGGAAGGCTACGGCTACGACAGCCGGCACCTGGCGCAGGTGAAGAACAACGGCGTGAGCCTGGCGCCCGGCGCGCTGATGGCGACCGGACGTGATCTCGACGTGGCGATCCAGGGCCAGGGCCTGTTCGCCGTCGAGGGTGACGACGGCGCCGAGCGCTACACGCGCAACGGCGCGCTGCAGGTCGATGCCGACCTGCGCCTGACCCTGAATGGCCGCGCCGTGCTGGGCGAGGGCGGGCCCATCGTGCTGCCCGAGTACGACAGCCTGCATATCGGCCGCGACGGCACGGTGTCGGTGATCCCGCGCGGCGACTTCCTCACCGCCGAGGTCGATCGCATCCGCGTGGTCGACGTCGCCGCCGGCGACCTGATCAAGGACGCCAGCGGTCTGCTGGCGCGCAGCGACGGCCAGCCGGCCGAAGATATGGAAGCGCCTGTACTGGTTTCCGGCTATCTGGAGGCGAGCAACGTCGGCGCCATCGATCAGCTGGTGGCGACCATGAGCCTGAACCGCCTGTTCGAGACCCAGGTGAAGATGATGAAGGCCGCCGAGGACCTGTCCGAGGCCGGCAACCGGATGATCCGCGGCTCGTAG MDRLGYTAMTAASRTMSSLTVRANNLANVNTPGFRADLEQAQAVAVEGYGYDSRHLAQVKNNGVSLAPGALMATGRDLDVAIQGQGLFAVEGDDGAERYTRNGALQVDADLRLTLNGRAVLGEGGPIVLPEYDSLHIGRDGTVSVIPRGDFLTAEVDRIRVVDVAAGDLIKDASGLLARSDGQPAEDMEAPVLVSGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAEDLSEAGNRMIRGS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0211 CDS 213261 214046 + flagellar basal-body rod protein FlgG YP_001185717.1 146305252 5106178 TIGRFAM: flagellar basal-body rod protein FlgGPFAM: flagellar basal body rod protein ; TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein Flagellar assembly [KEGG] Flagellar[Class 3] ; Extracellular[Class 3] TIGR02488|flgG_G_neg|flagellar basal-body rod protein FlgG|equivalog|2.4e-134||Cellular processes|Chemotaxis and motility PF00460|Flg_bb_rod, Flagella basal body rod protein|5|35|2e-05 ; PF06429|DUF1078, Domain of unknown function (DUF1078)|222|259|4e-09 COG4786|FlgG, Flagellar basal body rod protein [Cell motility and secretion]. ATGAGTTCCGCCCTTTGGGTCAGCAAGACCGGCCTGGCCGCCCAGGACAAGGCCATGAGCGCCGTGGCCAACAACCTGGCCAACGTCAACACCACCGGCTTCAAGAGCGACCGCGTGGTGTTCGAGGACCTGTTCTACGCCATCGAGCTGCAGCCCGGTGCCCAGGCCGATCAGGTCAACACCGTGCCGTCCGGCATTCAGCTGGGCAGTGGCGTGCGCGTCGCCGGCACGCAGAAGGTGTTCACCGAGGGCAGCATCCAGACCACCGGCCAGCCGATGGACCTGGCCATCATCGGCAACGGCTTCTTCCAGGTGGAGGCGCCCAACGGCGACATCTACTACACCGAGAGCGGCCAGTTCCAGCTCAATGCCGAGGGCGTGATCGTCAACGCCCAGGGCCTGCCGCTGGTGCCGGGCATCGAAGTGCCGGCCGGCAGCAGCCGCTTCACCGTGGGCAGCGACGGCATCGTCACCGCGGTGATGGCCGGCGAGACCCTGCCGGTGGAGCTGGGCCAGATCACCCTGGCCAACTTCGCCAACCCGGGCGGCCTGGAAGCCCTCGGCGGCAACCTCTACCGCGAGACCGTGGCCAGCGGCGAGCCGGTGGAAGGCACGCCGGGCGAGGACGGCCTGGGCAACCTCAAGCAGGGTGTGCTGGAAGGCTCCAACGTGCAGGTGGTCGAGGCCATGGTCAACATGATCGCCATCCAGCGCGCCTACGAGGCCAACGCCAAGGTGCTGGACGCCGCGTCCGGCATGCAGCAGTTCCTCAACCAGACCGTGTGA MSSALWVSKTGLAAQDKAMSAVANNLANVNTTGFKSDRVVFEDLFYAIELQPGAQADQVNTVPSGIQLGSGVRVAGTQKVFTEGSIQTTGQPMDLAIIGNGFFQVEAPNGDIYYTESGQFQLNAEGVIVNAQGLPLVPGIEVPAGSSRFTVGSDGIVTAVMAGETLPVELGQITLANFANPGGLEALGGNLYRETVASGEPVEGTPGEDGLGNLKQGVLEGSNVQVVEAMVNMIAIQRAYEANAKVLDAASGMQQFLNQTV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0212 CDS 214052 214714 + flgH flagellar basal body L-ring protein YP_001185718.1 146305253 5106179 PFAM: flagellar L-ring protein ; part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH Flagellar assembly [KEGG] Flagellar[Class 3] ; Outer Membrane[Class 3] PF02107|FlgH, Flagellar L-ring protein|33|219|2e-66 COG2063|FlgH, Flagellar basal body L-ring protein [Cell motility and secretion]. ATGAAGCGCCTGATCCCGCTTGCCCTGCTGCTGACCCTGGGTGGCTGCGCCAGCTTCAACGAGATGCTGCCCGACGAGGACTCCAGCCACTACGAGCCGCTGGCGCTGGACTACAGCCAGCCGCCCACCACCAGCGGCGGCCTGTTCCGCAGCGGCTACAGCGGCTCGCTGGTCGGCGACAAGCGCGCGGTGCGGGTCGGCGACATCCTCACCGTGGTGCTGGACGAATCCACCCAGTCGAGCAAAAGCGCCGGCACCAGCTTCGGCAAGAGTTCCGGAGTGTCCGTGGGCATTCCCACCGTGCTGGGCAAGCAGTACGACCAGCTGGAAAGCTCCGCCGAGGCCGAGCGCGATTTCAAGGGCTCGGCGCGCAGTTCGCAACAGAACACCCTGCGCGGCTCCATCGCGGTGACCGTGCATCAGGTGCTGCCCAACGGCACCCTGCTGATCAAGGGCGAGAAGGCCCTGCGTCTGAACCAGGGCGACGAGTACATCCGCCTGGTCGGCCTGGTGCGGGTCGACGACATCAACCGCAGCAACCAGGTGTCCTCGCAGAACGTGGCCAACGCGCGCATCTCCTACGCCGGCCGCGGCGTGCTCAACGACAGCAACTCGGCGGGCTGGCTGACGCGCTTCTTCACCCACCCGATCTTTCCGCTCTGA MKRLIPLALLLTLGGCASFNEMLPDEDSSHYEPLALDYSQPPTTSGGLFRSGYSGSLVGDKRAVRVGDILTVVLDESTQSSKSAGTSFGKSSGVSVGIPTVLGKQYDQLESSAEAERDFKGSARSSQQNTLRGSIAVTVHQVLPNGTLLIKGEKALRLNQGDEYIRLVGLVRVDDINRSNQVSSQNVANARISYAGRGVLNDSNSAGWLTRFFTHPIFPL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0213 CDS 214724 215818 + flgI flagellar basal body P-ring protein YP_001185719.1 146305254 5106180 PFAM: flagellar P-ring protein ; part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum Flagellar assembly [KEGG] Periplasmic[Class 3] PF02119|FlgI, Flagellar P-ring protein|22|364|1e-145 COG1706|FlgI, Flagellar basal-body P-ring protein [Cell motility and secretion]. ATGTTCAAACGCTCCCTCGTCTTCCTGCTGCTGAGCTGGCCACTGTCGACCAAGGCCGTGCCGCTGATGGACCTGGTGGACATCGAAGGCATCCGCGGCAACCAGCTGATCGGCTACGGCCTGGTGGTCGGCCTCGACGGCACCGGCGACAAGAACCAGGTGAAGTTCACCAGCCAGTCGGTGGCCAACATGATCAAGCAGTTCGGCATCAACCTGCCGCCGAACGTCGATCCCAAACTGAAGAATGTCGCCGCGGTGACCGTCACCGCGGAAATCCCGCCGTCCTACAGCCCGGGGCAGACGGTGGACGTCACCGTCTCCTCGCTGGGCGATGCCAAGAGCCTGCGCGGCGGCCAGCTGCTGCTGACCCCGCTGCACGGCGTCGACGGCGAGATCTATGCCCTGGCCCAGGGCGCGCTGGTGGTCGGCGGCCTCAACGCCAGCGGCCAGAGCGGATCCAGCGTGGCGATCAACTCGGCCAACAGCGGCCGCGTGCCCAACGGCGCCACCGTGGAGCGGATGATCCCCAGCGACTTCAGCGAGCGCGCCGAGGTCATGCTCAACCTGCGCCAGCCCAGCTTCCAGACCGCTGCCAAGGTGGTCGAGGCGGTCAACGGCCGCTTCGGCAGCGGCACCGCCAGCGCCCTCAACGCCACCAAGATCGCCATCCGCGCACCCATCACCAGCACCCAGCGCATCGGCTTTATGGCCATGCTCGAGGGGCTGGAGGTGGAAGAAGGCCGCGAACGGCCCAAGGTGGTGTTCAACAGCCGCACCGGCACCGTGGTGGTCGGCCAGGGCGTGCGCGTCAAGGCTGCCGCCGTGGCCCACGGCACCCTCACCGTGACCATCAGCGAGAACCCCCAGGTCAGCCAACCCAACGCCTTCTCCGGTGGCCAGACCGCGGTGGTGCCGCGTTCCGACGTCGCCGTCAGCCAGGACAAGAACGCCATGTTCAAGTGGCCCGACGGCGCCAGCCTGGACAGCATCATCAGCACCGTGAACAGCCTCGGCGCCACCCCGGACGATGTCATGAGCATCCTCCAGGCGCTGGAGCAGGCCGGTGCCCTCAATGCCGAACTGGTCGTGATCTGA MFKRSLVFLLLSWPLSTKAVPLMDLVDIEGIRGNQLIGYGLVVGLDGTGDKNQVKFTSQSVANMIKQFGINLPPNVDPKLKNVAAVTVTAEIPPSYSPGQTVDVTVSSLGDAKSLRGGQLLLTPLHGVDGEIYALAQGALVVGGLNASGQSGSSVAINSANSGRVPNGATVERMIPSDFSERAEVMLNLRQPSFQTAAKVVEAVNGRFGSGTASALNATKIAIRAPITSTQRIGFMAMLEGLEVEEGRERPKVVFNSRTGTVVVGQGVRVKAAAVAHGTLTVTISENPQVSQPNAFSGGQTAVVPRSDVAVSQDKNAMFKWPDGASLDSIISTVNSLGATPDDVMSILQALEQAGALNAELVVI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0214 CDS 215822 216946 + Lytic transglycosylase, catalytic YP_001185720.1 146305255 5106181 PFAM: Lytic transglycosylase, catalytic Periplasmic[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; biological_process|GO:0009296|flagellum biogenesis|IEA ; molecular_function|GO:0016798|hydrolase activity, acting on glycosyl bonds|IEA TIGR02541|flagell_FlgJ|flagellar rod assembly protein/muramidase FlgJ|equivalog|2.6e-05||No Data|No Data PF01464|SLT, Transglycosylase SLT domain|159|248|3e-19 ; PF10135|Rod-binding, Rod binding protein|45|95|7e-08 COG0741|MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane]. ATGAGCATCGTTTCCCTCGCCCAACACATGAACAGCCACCGCGGCGCCGCCGATGGCATCGGCAACGCCCGCGAGCAGCAGCTGCAGGCCGCCGCCGAGCAGTTCGAGGCGCTGTTTTTGCAGCAGATCCTCAAGCAGATGCGCAAGGCCAGCGACGTGCTCGCCGCCGGCAACCCGATGCGCAGCCGCGAGTTGGACACCATGCGCGACTTCTATGACGAGGTGCTGGCCGAGACCCTGGCCGGGCGCAAGCAGACCGGCATCGCCGACATGCTGGTCAAGCAGCTGTCCGGTGGTGGGGATAGCGCACCTGACCTGGAAGCGGCCGCCGCTGCCGCCCGTTCGGCGGAACTGCCGCAGCGCTCTTCCAGCAGCCTGCTGGAGCCGCTGCGCAGCACCTGGCAACGTGGCGTGGACAGCCTCGGCCAGGTCTGGGACAAGGGTTCGGCGGGCTTTCTCGCCCTGGTCGAACGGGTCATCCAGCAGGAGTCGGCCGGCCGCGTCGATGCCGTGTCGCCCAAGGGCGCGCGCGGCCTGATGCAGCTGATGCCGGACACCGCACGGGAGATGGCCGCCGAACTCGGCCTGCCGTTCAGCGAAGCCCGCCTGACCAGCGATGCCGACTACAACAGGCGCCTCGGCAGCGCCTACCTGGACAAGATGCTGCAGCGCTACGACGGGCACCAGGCCCTGGCGCTGGCGGCTTATAACGCCGGCCCCGGCCGCGTCGACGAATGGCTCAAGGTGCACGGCGACCCGCGCCGCGGCGAGATCGCCACCGGCGCCTGGATCGAGCGTATTCCCTTCCAGCAAACCCGCGACTACACGCGCAAGATTCTCGGCGACCTGGCCAAGGCCGAGCAGCCGCCCAAGGATGATGCACAAGTCAGCAGCCCGCTCAGCGCACAGACCCGCCAGCAGCTGGCCAGCGCCCTGAGCGCCGACAGCGGCCTGCTGCTCGGCGCCGTCGCCGGCAAGCAGGCGCTGGTGCGCGGCGAATTTAAGTCCGCCGCCGATTCCGTCGCCCTGTCCTCAGTAACAGCCCAATCCGCTGCCGACGACGCCCGTGCGCCGCGTCTGGCGGCCTTCGCTCAGCCGGTGCGCTTCGAGCGTCAGGAGTCCTAA MSIVSLAQHMNSHRGAADGIGNAREQQLQAAAEQFEALFLQQILKQMRKASDVLAAGNPMRSRELDTMRDFYDEVLAETLAGRKQTGIADMLVKQLSGGGDSAPDLEAAAAAARSAELPQRSSSSLLEPLRSTWQRGVDSLGQVWDKGSAGFLALVERVIQQESAGRVDAVSPKGARGLMQLMPDTAREMAAELGLPFSEARLTSDADYNRRLGSAYLDKMLQRYDGHQALALAAYNAGPGRVDEWLKVHGDPRRGEIATGAWIERIPFQQTRDYTRKILGDLAKAEQPPKDDAQVSSPLSAQTRQQLASALSADSGLLLGAVAGKQALVRGEFKSAADSVALSSVTAQSAADDARAPRLAAFAQPVRFERQES Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0215 CDS 216950 218317 + flagellar hook-associated protein FlgK YP_001185721.1 146305256 5106182 TIGRFAM: flagellar hook-associated protein FlgKPFAM: protein of unknown function DUF1078 domain protein ; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein Flagellar assembly [KEGG] Flagellar[Class 3] ; Extracellular[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; biological_process|GO:0009296|flagellum biogenesis|IEA ; cellular_component|GO:0009424|flagellin-based flagellum hook|IEA ; molecular_function|GO:0005198|structural molecule activity|IEA TIGR02492|flgK_ends|flagellar hook-associated protein FlgK|equivalog|2.7e-110||Cellular processes|Chemotaxis and motility PF06429|DUF1078, Domain of unknown function (DUF1078)|416|454|1e-09 COG1256|FlgK, Flagellar hook-associated protein [Cell motility and secretion]. GTGACCATCCTCAATCAGATCGCCTACAGCGGCGTGCGTGCCAGCCAGGTCGCCCTGGCCAGCACCGGGCAGAACATCGCCAACGTCAACACTCCCGGTTTCAGCCGCCTGCAGACCATCACCGGGTCGCTGGCCGGACAGGGCGGGCTGAGCGTCGGCGGCGGCGTCGAGGTCATCAGCATCCGTCGCATGACCAACGACTTCCACAACCAGCAGCTGTGGCGCGCCACCACCGAGCAGAGCTTCTACAGCGCGTCGCAGCAGTACCTGACCGCACTGGAAGCGCTGATGTCCGGCAGCGGTTCGAGCATCAGCGCCGGCCTCGACCAGTTCTTCGCCGCCCTGAGCGAGGCCAGCGCGACGCCAGGCTCCATCGCCCTGCGTCAGCAGATCATCAGCGAGGCCGGCAACCTGGCGCAGCGCTTCAACGGCCTGAACAGCAACATCGACGCGCAGATCAAGGCGCTGCAGGAGCAGCGCAGTGCCATGGCCACCGAGATCAACGGCCTGACCGAGAACATCGCCCTGCTCAACAAAAAGATCGTCGAGACCGAATCGGTCAAGGGCGACAGCACTGCGCTGCGCGATCACCGCGAGAGCCTGATCGGCCAGCTCAGCCAGTTCGCCAAGCTGCGCGTCAACGAGACCCCGGACGGCTCGGTCAGCGTCGCCCTGGCCAACGGTCAGCCGCTGGTGGCCGGGCCCACCGCCGGCCAGCTCAAGGTGGCGATGACCGCGAGCGGCGAGCAGGATGTCAGCCTGGCCTTCGCCGGCACCAGCTTCCCGCTGCGCCAGGACGGCTTCGGCGGCGCCTTCGGTGGTCTGTACGAGGTCGAGTACGCCAGCCTGCGGCCGAACCAGCAGGCCCTGCACGACATGGCCAGCCAGCTGGCGCAGATGGTCAACGACGTGCTGGCCACCGGCTTCGACCTGGCCGGCAACCCCGGTCAGCCGCTGTTCGCCTACGACCCCAACAGCACCACCGCCCTGCTGCGTGTCGAGCCCCTGACCGCCGAGCAACTGGCGTTCTCCTCGGCCGCCGGCGAGAGCGGCAACAACGAGGTGCTGCTCGATCTGCTCGGCCTGAAGAACCAGACCATCACCCTGAACGGCAGCCAGGTCACCCTCAACGACGCCTACGCCGGCCTGCTCGGCCAGGTGGCCAGCGATAGCCGGCAGAATCAGGCCGACCTCAAATCCGCCACCGCCGTGACCCAGCAGGCCCAGTCGCAGCGCGACAGCGTCAGCGCCGTGAGCCTGGACGAGGAGGCGGTCAACCTGATGACCTACCAGCAGGCCTACCAGGCCAACATGAAGGTGATCAGCACCGCCAACCAGTTGTTCGACGACATGCTTGCCGCGTTCTGA MTILNQIAYSGVRASQVALASTGQNIANVNTPGFSRLQTITGSLAGQGGLSVGGGVEVISIRRMTNDFHNQQLWRATTEQSFYSASQQYLTALEALMSGSGSSISAGLDQFFAALSEASATPGSIALRQQIISEAGNLAQRFNGLNSNIDAQIKALQEQRSAMATEINGLTENIALLNKKIVETESVKGDSTALRDHRESLIGQLSQFAKLRVNETPDGSVSVALANGQPLVAGPTAGQLKVAMTASGEQDVSLAFAGTSFPLRQDGFGGAFGGLYEVEYASLRPNQQALHDMASQLAQMVNDVLATGFDLAGNPGQPLFAYDPNSTTALLRVEPLTAEQLAFSSAAGESGNNEVLLDLLGLKNQTITLNGSQVTLNDAYAGLLGQVASDSRQNQADLKSATAVTQQAQSQRDSVSAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDMLAAF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0216 CDS 218341 219258 + flgL flagellar hook-associated protein FlgL YP_001185722.1 146305257 5106183 TIGRFAM: flagellar hook-associated protein 3PFAM: flagellin domain protein ; with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella Flagellar assembly [KEGG] Flagellar[Class 3] ; Extracellular[Class 3] biological_process|GO:0001539|ciliary or flagellar motility|IEA ; cellular_component|GO:0009424|flagellin-based flagellum hook|IEA ; molecular_function|GO:0005198|structural molecule activity|IEA TIGR02550|flagell_flgL|flagellar hook-associated protein 3|equivalog|4.2e-62||Cellular processes|Chemotaxis and motility PF00669|Flagellin_N, Bacterial flagellin N-terminus|28|140|4e-08 COG1344|FlgL, Flagellin and related hook-associated proteins [Cell motility and secretion]. ATGATGCGCATCACCAATTCGCAGATCACCTCGATGATGCACAACTCGATGAACGCCAGTTCCGCCGAGTTGGGCAAGCTGATGCAGCAGATGGCCAGCGGCAAGCGCATCCTGCTGCCATCCGACGATCCCATCGCCAGCGTGCGGGTGCTGCGCGTGCAGCGCGAGGAGGCGAGCCTGGAGCAGTTCCGCAAGAACATCGCCAACGTCTCCGGCAGCCTGTCGACCCAGGAGGCCAACCTCAAGTCCACCTCCGACTCCATGCTCAACGTGCGCGATCTGCTGCTGTGGGCGGCCAACGGCTCCAACACCAGCGAAGACCTGGCGGCCATGGCCGGCGAACTGTCGATCATCGAGGACACCATCTTCAGCTTCGCCAACGTGCGCGATGAGGAAGGCCGCTACCTGTTCTCCGGCACCCTCAGCGACACCCCGGCGCTGAGCTTCGACGCCGCGACCCAGACCTACAGCCTGACCGGCAACGACAAGCACCGTCAGGCCGCCGTGGCCAACGGCGTGCTGGTGGACGAGAACGTCACCGCGGCCAGCGTCTTCGGCGCGGGCGTGGACATGCTCAACCAGCTGCGCGGGCTGATCAACACGCTGCGCGACCCGGCGCTGGACGCCAGCGACCCGGCCGTACGCCAGCAGATCGTCGACACCCTCGGGGCGCTGGATGACACCCATGGCCGGGTGCTCGGCTCGATCACCGAGCTGGGCGGCCGGCAGAATGCCCTGAGCCTGCTCAAGGACAGCAACGAGGACGTCTCGCTGGTCAACCAGAAGATCGAGGGCGAGCTGTCGCAGCTGGACTACGCCGGCGCCACCATCGATCTGAACAACTATCAGCTGGCCCTCGGCGCGACGCAGAAGACCTACCTGAAAATCAACGAGATGTCGTTGTTCAGCCTGCTGTAA MMRITNSQITSMMHNSMNASSAELGKLMQQMASGKRILLPSDDPIASVRVLRVQREEASLEQFRKNIANVSGSLSTQEANLKSTSDSMLNVRDLLLWAANGSNTSEDLAAMAGELSIIEDTIFSFANVRDEEGRYLFSGTLSDTPALSFDAATQTYSLTGNDKHRQAAVANGVLVDENVTAASVFGAGVDMLNQLRGLINTLRDPALDASDPAVRQQIVDTLGALDDTHGRVLGSITELGGRQNALSLLKDSNEDVSLVNQKIEGELSQLDYAGATIDLNNYQLALGATQKTYLKINEMSLFSLL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0217 CDS 219271 220296 + hypothetical protein YP_001185723.1 146305258 5106184 Unknown[Class 3] GTGATCAAGGTCGACAAACAGCTGCCGGTCGTCACCGCCCTCGATCCGCAGACGCGGCGCCCGGTGCAGGGCGAGCAGGCGGTACAGCGCCAGCGCAAGCAGGCGCCCGCCGAGCCCGCGGCGCAGCCGCGCGGCAAGAGCACCAGCTTCAACCTGCAGCTCAACCAGCAACTGACCTCGATGCAGGCTGCCGACAGCTACCTCGGCGAACTGGCCGGGCGCCTCGGTCAGCTCAAGCTCAGCCTCAGCCGCGAGCTGAGCAATGCCCAGGCCGGCGAACGCGAAGGTCTCAAGCGCGAGCTGGAGCAGGTGCGCCAGTTGCTCGCCGAACGCGGTCAGCGCTCCGGCGAGGCGCTGGATGCCAGCTTCAAGCTGCGCCTCACCGAGCCGGTGCGCAGCCGCTTCAGCCTGCAGAGCCTGGAATCCATGGCCGCCATCCAGCAGGCCGGCAAGGAGACCCTGCTGTTCAGCGCCGGGCGCAAGCTGGCCGAACCGCTGGCGGTGGTGCTCGACGAGGGCCTGAGCGAGCAGCAGATCCTCCGCCGCTTCAATGCCGGCCTCGGCCCGGCCGGCATCCGCGCCGAAGTGGATAACGGCGGTGCGCTGAAATTCAGCGCCCGCGAAAGCGACTGGCAGCAGCTCAAGGGCGAGCTGCGCGTGCAGGGCGAGGGCAAGCTGGCGGCCAAGGCCGCGGCGCCCGTGGTCAGTCAGGAAGAGCAGTTGCTGCGCCTGCCCGATGCCGCCCGCCTGGACGGCGCGCGCGAGTTGCGCCGGGCACTGGACGAAGTGGTGGCGGCGCTCGACAAGATCGGCGCGCTGCGCGAGCAGCTCAGCCATCGCCAGGAAGAGATCCGCGAGTTTCTCGCCCGCCATGCCGAGCAGAACGAACGCGAATGGGCGCGCGACTTCGCCGGCGAGGTGTTCAACCTGATGCGCCGCAGCCCCAGCAGCTACGCCGCGGTGACCCAGACCGTGGTGGCCCAGGCCAACATCAGCCGCTCCAGCGTGGTCAGCCTGCTGTCCTGA MIKVDKQLPVVTALDPQTRRPVQGEQAVQRQRKQAPAEPAAQPRGKSTSFNLQLNQQLTSMQAADSYLGELAGRLGQLKLSLSRELSNAQAGEREGLKRELEQVRQLLAERGQRSGEALDASFKLRLTEPVRSRFSLQSLESMAAIQQAGKETLLFSAGRKLAEPLAVVLDEGLSEQQILRRFNAGLGPAGIRAEVDNGGALKFSARESDWQQLKGELRVQGEGKLAAKAAAPVVSQEEQLLRLPDAARLDGARELRRALDEVVAALDKIGALREQLSHRQEEIREFLARHAEQNEREWARDFAGEVFNLMRRSPSSYAAVTQTVVAQANISRSSVVSLLS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0218 CDS 220390 221370 - TRAP dicarboxylate transporter, DctP subunit YP_001185724.1 146305259 5106185 TIGRFAM: TRAP dicarboxylate transporter, DctP subunitPFAM: TRAP dicarboxylate transporter- DctP subunit ; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit Periplasmic[Class 3] biological_process|GO:0006810|transport|IEA ; cellular_component|GO:0030288|outer membrane-bounded periplasmic space|IEA ; cellular_component|GO:0031317|tripartite ATP-independent periplasmic transporter complex|IEA ; molecular_function|GO:0005215|transporter activity|IEA ; molecular_function|GO:0005488|binding|IEA TIGR00787|dctP|TRAP transporter solute receptor, DctP family|subfamily|8.7e-58||Transport and binding proteins|Carbohydrates, organic alcohols, and acids PF03480|SBP_bac_7, Bacterial extracellular solute-binding protein, family 7|29|311|8e-82 COG1638|DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component [Carbohydrate transport and metabolism]. ATGTTCAAGACCTCTCTGGCGGCTGCCCTGGCCGCCCTGCTGTGTTCCGCACAGGCTCTGGCCGAGCCGATCCTGATCAAGTTCTCCCACGTGGTGGCCGAGGACACCCCCAAGGGCAAGGGCGCCCTGATGTTCAAGCGTCTGGCCGAGGAACGCCTGGCCGGCAAGGTGCAGGTGGAGGTGTATCCCAACTCCACGCTGTTCGGCGACGCCGACGAGCTGCAGGCGCTGCGCGACAACAAGGTGCAGCTGCTGGCGCCGTCGCTGTCGAAGTTCGAGCAGTACACCACCCAGCTGCAGGTGTTCGATCTGCCCTTCCTGTTCGATGACCTGGAGGCGGTCAAGCGCTTCCAGAAGCGCGAGAAGAGCCGCGAGCTGCTGCGTTCGATGGCCGGCCACAACATCTACGGCCTGGCCTACTGGAACAACGGCATGAAGCAGCTCTCGGCTACCCGCGCGCTGCACACTCCCGCCGACGCCGCCGGTCTGGCGTTTCGCATCCAGCCTTCGGAAATCCTCGAGCAGCAGTTCGCCCGGGTCGGCGCCAGCAGCCTGCGCCTGCCGTTCGCCGAAACCCAGGCCGCGCTGCAGGCCGGGCGCGTGCAGGGCGCAGAGAACCCCTGGTCGAATATCGTCAGCCAGCAGCTGGGCGCGCTGCAGCCCTACGTCACCGAAACCGATCACGGTGTGCTGAGCTACATGCTGGTGAGCAACTCCAGCTTCTGGACCAGCATTCCCTATCCGATTCGCGTGCAGCTGGAGGCGATCGTCGATGAAGTCACCCTGGCGGTGAATCGCGAGGCCGAGGCACTCAACGCCCGTGATCGCCAGCGTCTGGTCGCGGCCGGCAATCAGGTCGTCAGTCTCAGCAACGAGCAGCGCGCAGCCTGGCGTGCGGCGATGCAGCCGTTGTGGCAGGAGTACGAAGGCAAGATCGGCAGCGATGTGCTGCGTGCGGCGCAGACGGTCAACCGCCGCTGA MFKTSLAAALAALLCSAQALAEPILIKFSHVVAEDTPKGKGALMFKRLAEERLAGKVQVEVYPNSTLFGDADELQALRDNKVQLLAPSLSKFEQYTTQLQVFDLPFLFDDLEAVKRFQKREKSRELLRSMAGHNIYGLAYWNNGMKQLSATRALHTPADAAGLAFRIQPSEILEQQFARVGASSLRLPFAETQAALQAGRVQGAENPWSNIVSQQLGALQPYVTETDHGVLSYMLVSNSSFWTSIPYPIRVQLEAIVDEVTLAVNREAEALNARDRQRLVAAGNQVVSLSNEQRAAWRAAMQPLWQEYEGKIGSDVLRAAQTVNRR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0219 CDS 221603 222754 - hypothetical protein YP_001185725.1 146305260 5106186 Cytoplasmic[Class 3] ATGAACCTGTCCTGTTTCGCCCAGAGCTACGCCGAAGCCCGGCAGAAATTTCTCGCCAGCTGCGCCCGCCGCGGCCTCGCCGTGGAGAGCCACGTCCACCCGCTGCCCGGCCGCGACGGCGAACAACTGGCCATCGACGTGGCCCGCCTCGGTGCCGCCGACGCCGCCAACCTGCTGGTGCTGAGCAGCGGCTGCCACGGCATCGAGGGTTTCTGCGGCTCGGCCATCCAGATCGACCGGCTCGACGACGACGCCTGGTTCGCCGCCTGCCAGCGCGGCGACCTGGCGCTGCTGTACATCCATGCGCTGAATCCCTACGGCTTTTCCTGGGAGCGCCGGGTGACCCAGGAAAACGTCGACCTCAACCGCAACTTCCAGGACTTCGCCGCGCCGCTGGCGGACAACCCCGACTACCGCGCGGTGGCCAAACTGCTGCTGCCCGAGCGCTGCCCGCCGACCCTGGCGAGCACCCTGGGGCTGTACGGCTACGCCCTGCGTCATGGGCGCAAGGCGCTGCAGGCGGCGATCTCGCGCGGCCAGCACGGCGACCCGCGCGGCCTGTTCTTCGCCGGCACCGAGCCGACCTGGAGCAACCGCCAGCTGCGCCAGATTCTTCGTCAGCACGGCCGCCAGTGCCGGCGCATCGGCTGGATCGACGTGCACACCGGGCTCGGCCCCAGCGGCTACGGCGAGCGCATCTACAAGGGCCGCCAGGAGCCCGCGGACATCGCCCGCGCCCGTCAGTGGTGGGGGCCGCAGGTGACCAACAGCGCCGAGGGCAACTCCGCCTCCAGCGAGCTCAACGGCACCCTCGACCTGGCGGTGCTGGATGAATGCGCCCAGGCCCAGTACAACGGCCTGACCCTGGAGTACGGCACCCAGCCGGGACTCAAGGTGCTCACCGCGCTGCGCGCCGAGCAGTGGCTGGAGAACCGCCCGGACACCGACGCCGCCACCCGCGCACGGATCAAGGCGCAGCTGCGCGCCGCCTTCTACGTCGAGACCGACGCCTGGAAACGCCAGGTGCTGGAACAGGCCCGCGAGGTGCTGGAGCTGACCCGCCAGGGCCTGGCCACGCCGTTGCGAGCCCTGCACCAGAGCGAGAGCCAGGCAATTGCCGAGCAATACTCGGGAATGCGCGCCCGTTCATAA MNLSCFAQSYAEARQKFLASCARRGLAVESHVHPLPGRDGEQLAIDVARLGAADAANLLVLSSGCHGIEGFCGSAIQIDRLDDDAWFAACQRGDLALLYIHALNPYGFSWERRVTQENVDLNRNFQDFAAPLADNPDYRAVAKLLLPERCPPTLASTLGLYGYALRHGRKALQAAISRGQHGDPRGLFFAGTEPTWSNRQLRQILRQHGRQCRRIGWIDVHTGLGPSGYGERIYKGRQEPADIARARQWWGPQVTNSAEGNSASSELNGTLDLAVLDECAQAQYNGLTLEYGTQPGLKVLTALRAEQWLENRPDTDAATRARIKAQLRAAFYVETDAWKRQVLEQAREVLELTRQGLATPLRALHQSESQAIAEQYSGMRARS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0220 CDS 222897 224366 - poly-gamma-glutamate biosynthesis protein YP_001185726.1 146305261 5106187 Cytoplasmic[Class 3] PF09587|PGA_cap, Bacterial capsule synthesis protein PGA_cap|32|195|4e-32 COG2843|PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]. ATGCAGCACCGCGTCCCCACCCCGCAGCAACGCCCCGAGTCCCTCGAACTGCAGCCGAACTGGCGCCAGGCCGAGGTGGAGGACGGTTTCTGCGTGGTCGCCGTCGGCGACATCATCATCACCCACGCCATCGCCGCGAAGCTGGCGCGCAAGTCCCCGGAACTGCTGCAGATCCTGCGCCGCGGCGACGTGCTGGTGGGCAACTACGAAGGCACCGCCATCGATCTGAACAGCTTCGCCGGCTACCCCGAGGCGCTGTCCGGCTTCTCCTGGCTGATCAGCGACCCGGACGCCCCGGCGGACCTGGCCGAGCTCGGCTTCAACCTGCTGGCACGGGCCAACAACCACGCGCTGGACTGGGGCGTGGCCGGCATGCGCATGACCGACGCGCTGCTCGATGCCGCCGGCATCGCCCACGCCGGCACCGGCGACAGCCTGGCCGCCGCGCGCGCGCCGGCCTTCATCAATACCGCCAAGGCGCGGGTGTCGCTGACCTCCTACGCCACCACCTTCGAGGCCAACGCCCCGGCTGCCGACGGCCTAGGCCAGGTGGCGCCGCGGCCCGGCCTCAATCCGCTGCGCACCACGCCGCACCGCCTGGTCAGCGCCGAGGACTTCGCCGTGCTCAAGCGCCTCAACGCCCAGGAGGCCTACCAGGACCATTACCTGCTCAAGGCCCTGCACGGCGAACACAGCCTGCACCTGGGCATGGCCCTGCACTACCGCGTCGACCCCGAAGCCGCGCCGGGCAGCCTGCGCATCCACTACCAATGCGACCCGCGCGACCAGGCCGAGATCCTCCGCCACCAGCGCCAGGCCAAGCAGACCAGCGACTTCAGCATCGTCGCCCAGCACACCCATGAACCGGACAACTTCACCGCCGCGGTACCCGACTACCTGCCGGCGCTGGCCCGCCAGCTGGTCGACAACGGCGCCGACATGCTCTGCGGCCACGGCCCGCATCAGCTGCGCGGTATCGAGATCTACGCCGGCAAGCCGCTGCTCTACTCGCTGGGCAACTTCTGCTTCATGGACAACAGCATGCAGATCGTCCCGGCGGACAAGTGGGAGAGCCGCGAGTGGCAGGCCGCCGAGGCGCTGATCGGGCCCAAGGGCATCACCAACCCGCGCCTGAGCACCCCGGCCGAGTTTCTCGAATGGAAGCGCGTGGCCGGTCTGTTCGGCGCGCCGATCTGGTTCGAAAGCGTGGTCGCCGAGTGCCGCTTCCGCGCCGACGGCCAGCTGCGCGAACTGCTGCTGCACCCCATCGAACTGGGCCATGGCGGACGCGACGCCGAACGCGGCATTCCGCGCCTGGCCTTCGACACGGCGGACAACCAGCACCAGGCGCGGCGCATCCTCGAGCGTCTGGCCGGGCTGTCTGCCGAGTTCGGCACACGCATCGAGATCGAGACGGTGGAGTACGCCGGCCGGGCCAGCAGCCTGGGCCGCATCGTGCTCGACGCCTGA MQHRVPTPQQRPESLELQPNWRQAEVEDGFCVVAVGDIIITHAIAAKLARKSPELLQILRRGDVLVGNYEGTAIDLNSFAGYPEALSGFSWLISDPDAPADLAELGFNLLARANNHALDWGVAGMRMTDALLDAAGIAHAGTGDSLAAARAPAFINTAKARVSLTSYATTFEANAPAADGLGQVAPRPGLNPLRTTPHRLVSAEDFAVLKRLNAQEAYQDHYLLKALHGEHSLHLGMALHYRVDPEAAPGSLRIHYQCDPRDQAEILRHQRQAKQTSDFSIVAQHTHEPDNFTAAVPDYLPALARQLVDNGADMLCGHGPHQLRGIEIYAGKPLLYSLGNFCFMDNSMQIVPADKWESREWQAAEALIGPKGITNPRLSTPAEFLEWKRVAGLFGAPIWFESVVAECRFRADGQLRELLLHPIELGHGGRDAERGIPRLAFDTADNQHQARRILERLAGLSAEFGTRIEIETVEYAGRASSLGRIVLDA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0221 CDS 224384 225679 - major facilitator transporter YP_001185727.1 146305262 5106188 PFAM: major facilitator superfamily MFS_1 Cytoplasmic Membrane[Class 3] TIGR00881|2A0104|phosphoglycerate transporter family protein|subfamily|1.1e-08||Transport and binding proteins|Carbohydrates, organic alcohols, and acids PF07690|MFS_1, Major Facilitator Superfamily|16|364|2e-21 COG2271|UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism]. ATGACCCAGCCCAACCCCTCGCGCCGGATTCTGGTGGTCGCCCTGCTGATGGCGGTGATGATCATCAGCGTGCTGGACAAGACCATCTTCGCCTTCGCCGGCCCGCAGATCATCGACGAGCTGCAGCTGTCGCCGGAGCAGTTCGGCTTCATCGGCAGCGCGTTCTTCTTCCTCTATTCGATTTCCGGGGTGCTGGTGGGGTTTCTCGCCAACCGCCTGCCGAGCCGCTGGATTCTCTCCGGCATGTCGCTGGTGTGGATGGCCGCGCAGCTGCTCACCGCGCTGGCGACCAGCTTCTACACCCTGGTCGCCAGCCGCCTGCTGCTCGGCGCCGGCTGCGGCCCGGGCACCGCGGTGACCCAGCACGCCTGCTTCAAGTGGTACGCGCCGCGCGAGCGGGTGCTGCCGGCAGCACTGATTCAGGTGGCGATCATGCTCGGCGCCATCGCCGGTGCCCTGGCCCTGCCGCTGCTGATCGAGCGCCTGGGCTGGCGCGCCGGCTACCTGCTGCTGGCCGGCGTCGGCCTGCTCTGGCTGCTGCTGTGGCAGCTGTGCGGCCGCGAGGGCCAGTACGACGACGCCAATGACGACAGCGGCGGCGCCGCTCTGCCGTACCGCCACCTGCTGCTCAACCGCACCTTCGTCGGCATCACCCTGATCGCCTTCTGCAGCTACCTGCCCAACGCCCTGCTCTACAGCTGGCTGCCCACCTACCTGCAGAAGGGCCTGGGGCTGACGCCGATGCAGTCCGGCTACCTGGTGCTGTCCACCACCCTCGGCGTGATCGTCCTCAACCTGCTGGTTTCCAGCCTGTCGCAACGGGCCCTGCAACGCGGCGCCAGCGTGCGCGCGGCGATGGTCATGCCGCCGCTGCTGGCCTGCCTGGTCGCCGCCCTGGCCTTCGCCCTGATGGGCCTGAGCGCCACCGGCCTGGCCGCCACCCTGGGGCTGTTCCTCGTCGGCGGCATCCTGGTCAACCTGCTCTCGGCCTTCGGCTACAGCATCGTCGCCTACATAGTCCCGGCACGGCAGCGCGGCAGCATGCTGGCCATCCATATCGGTCTGCTGACCAGCGCCGGCATGCTCGCCCCGCATCTGGTCGGCCAGGCCATCGGCTGGCAGGGCGGCGACCTGGCCGCCGGCTTCGAGCTGGCCATCGGCCTGTTCGGCCTCGCCCTGCTGGCCAGCACCCTGCTCGGCCTGCTGCTGATCGACCCGGAGCGCAGCCGCCGCGACCTGGCCGCCCACGCCGACACCCCCGAAACCATCCCCGCGCCGGCCCCGAGCCAGGCCTGA MTQPNPSRRILVVALLMAVMIISVLDKTIFAFAGPQIIDELQLSPEQFGFIGSAFFFLYSISGVLVGFLANRLPSRWILSGMSLVWMAAQLLTALATSFYTLVASRLLLGAGCGPGTAVTQHACFKWYAPRERVLPAALIQVAIMLGAIAGALALPLLIERLGWRAGYLLLAGVGLLWLLLWQLCGREGQYDDANDDSGGAALPYRHLLLNRTFVGITLIAFCSYLPNALLYSWLPTYLQKGLGLTPMQSGYLVLSTTLGVIVLNLLVSSLSQRALQRGASVRAAMVMPPLLACLVAALAFALMGLSATGLAATLGLFLVGGILVNLLSAFGYSIVAYIVPARQRGSMLAIHIGLLTSAGMLAPHLVGQAIGWQGGDLAAGFELAIGLFGLALLASTLLGLLLIDPERSRRDLAAHADTPETIPAPAPSQA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0222 CDS 225807 226730 - LysR family transcriptional regulator YP_001185728.1 146305263 5106189 PFAM: regulatory protein, LysR ; PFAM: regulatory protein, LysR; LysR, substrate-binding Cytoplasmic[Class 3] biological_process|GO:0019619|protocatechuate catabolic process|IEA ; biological_process|GO:0045893|positive regulation of transcription, DNA-dependent|IEA ; molecular_function|GO:0016563|transcription activator activity|IEA TIGR02424|TF_pcaQ|pca operon transcription factor PcaQ|equivalog|1.1e-12||Energy metabolism | Regulatory functions|Other | DNA interactions PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|3|61|1e-16 ; PF03466|LysR_substrate, LysR substrate binding domain|91|289|2e-21 COG0583|LysR, Transcriptional regulator [Transcription]. ATGAAACTGCACCAGCTGCGCGCCCTGCTCGCGATCTGCGAAAGTGGCAGCATCCAGGAGGCCTCACGCCTGCTGCATATCTCCCAGCCGGCCCTGTCCAAAGGCATCAAGGAGCTCGAGGCGGAGCTCGGCGTACCGCTGCTGGTGCGCTCCAACCGCGGCATCACCGTCACCGAATACGGCGAGCGTCTGGTGCGCCGCGCGCGCCTGATCCTCGAGGAGGTGCGCCGCGCCCGCGAGGAGATCGAGAGCCTCAAGGGCACCATGGACGGCAAGCTGGCCATCGGCGTATCGCCGGTCACCCCCGGCGCCCAGTTCATCACCAGTCTCAACCGCTACCGCAAGCGCTACCCCAGGGTGCAGGTGCAGATCCACGAGCTGCGCCCGTCCAAGCTGATCGAGGGCCTGCGCGAGGGCCAGCTCGACCTGGTGCTGACGTCCCTGCCGGCCAGCCGTTGCAGCGACGGTTTCCACTGGACCGAGCTGTTCTCCCAACCGGCGGTGTTGGCCGTGCGCAAGGGCCACCCGCTGGGTGGCGCGCGGTCGTTGCGCGAGCTGCTCGACGAGGAGTGGCTGCTGCAGGATTCGCTGGAGCTGTCCAAGGTCGGCGTGATGTTCGAGCAGCACCGCATCGAGCCGCCGCGACGCATCATCGAGTGCGCCTCGGTGGTGCTGTTCTCCGAGCTGGCGCTGAATACCGACACGGTCAGCTACTGGTCACGGCGGCTGCTCGACCACGTGCAGAAGCTCGGCCAGGAACTGCAGGTGCTCGACCTGCAGGAGCAGGTGCCGCCGATGAACATTTCCCTGGTCTGCCGCGATCAGGAGCTGATGACCCGCGAGGCCAAGACCCTGGCCGACGAGCTGGTCTACGCCTATACCAGCCCGCACGCGTCCAGGCCGGTGGGCAGCGACGCCCCATAA MKLHQLRALLAICESGSIQEASRLLHISQPALSKGIKELEAELGVPLLVRSNRGITVTEYGERLVRRARLILEEVRRAREEIESLKGTMDGKLAIGVSPVTPGAQFITSLNRYRKRYPRVQVQIHELRPSKLIEGLREGQLDLVLTSLPASRCSDGFHWTELFSQPAVLAVRKGHPLGGARSLRELLDEEWLLQDSLELSKVGVMFEQHRIEPPRRIIECASVVLFSELALNTDTVSYWSRRLLDHVQKLGQELQVLDLQEQVPPMNISLVCRDQELMTREAKTLADELVYAYTSPHASRPVGSDAP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0223 CDS 226866 228227 - hypothetical protein YP_001185729.1 146305264 5106190 PFAM: protein of unknown function DUF1329 Unknown[Class 3] PF07044|DUF1329, Protein of unknown function (DUF1329)|61|430|1e-172 ATGATTCACAAGCAGTTGATCCAGGCCGGTTGCCTGGGCCTGAGCCTGCTCGCCGCCCAGGTACTGGCGGCGGTGCCGGCCGACCAGCTCGCCCGCCTCGACGGCGACCTCACCCCGGTCGGCGCCGAGCGCGCCGGCAACGCCGACGGCAGCATCCCGGCCTGGACCGGCGGTATCGGCCAGGACGCCGGCCAGCGCGACGCCGACGGTTTCCTCAGCGATCCCTTCGCCGCCGACCAGCCGCTGTTCGTCATCACCGCGGCCAATGTCGAGCAGTACCGGGACAAGCTCACCCCCGGCCAGCTGGCGCTGTTTCAGCGCTATCCGGCCACCTACCGCATCCCGGTCTACCCGACCCGGCGCTCGGTCGCCCTGCCGCAGAGCTATCTCGATGCCACCCGCGCCAACGCCGCCGCCACCCGTCTGGCCGAAGGCGGCAACGGCCTGCTCGACTACCGCAGCGGCGGCCTGCCGTTCGCCATTCCGCAGAACGGCCTGGAGGTGATCTGGAACCATATCGGCCGCTACCGCAGCCTGAGCTTCCAGCGCCAGGTGGTGCAGGCCTCGCCGCAGGCCAACGGCGCCTACACCCCCAGCGTGATCCGTCAGCAGCTGGCCTACCCGGCCGGGCTGTCCGACTACGCGCCGCAGGAAATGGCCAACGTTCTCTACTACTACCGCGAGGAGTTCCTCTCCCCGGCGCGCCTGGCCGGCGGCGTGCTGCTGGTGCACGAGACCATCAATCAGGTCAAGGAACCGCGCATGGCCTGGCAGTACAACGCCGGCCAGCGCCGCGTACGCCGCGCGCCGCAGATCGCCTACGACAGCCCCGGTGCCGAGGGCATGCGCACCATGGACGACCTCGATCTGTTCAACGGCTCGCCGGATCGCTTCGACTGGCAGCTGCTGGGCAAGAAGGAAATCTACATCCCCTACAACAGCTACAAGCTCGGCTCGCCCAAGCTCAAGTACGCCGACATCATCCAGCCCGGGCATATCAACCCCGAGCACACCCGCTACGAGCTGCACCGGGTCTGGCACGTCAGCGCCACGCTGAAGCCGGGACAGCGCCACGTCTACTCGCGACGTGACCTCTACATCGACGAGGACAGCTGGCAGGCCGCCCAGGCCGATGCCTACGACGGCCGCGGCCAGCTGTGGCGAGTGTCCGAGGGCCACGCCAGCTTCTTCTACGACCAGCAGAGCCCGCAGTACAACGCCGAGACCCACTACGACGTGCTGTCCGGACGCTATGCGGTCAACGCCCTGTACAACGAGGAGAAGCAGGCCTACCGCTTCGACCAGACCTTCAACCGCAAGCAGTTCACCCCCAGCGCCCTGCGCGCCAGCGGTATCCGCTGA MIHKQLIQAGCLGLSLLAAQVLAAVPADQLARLDGDLTPVGAERAGNADGSIPAWTGGIGQDAGQRDADGFLSDPFAADQPLFVITAANVEQYRDKLTPGQLALFQRYPATYRIPVYPTRRSVALPQSYLDATRANAAATRLAEGGNGLLDYRSGGLPFAIPQNGLEVIWNHIGRYRSLSFQRQVVQASPQANGAYTPSVIRQQLAYPAGLSDYAPQEMANVLYYYREEFLSPARLAGGVLLVHETINQVKEPRMAWQYNAGQRRVRRAPQIAYDSPGAEGMRTMDDLDLFNGSPDRFDWQLLGKKEIYIPYNSYKLGSPKLKYADIIQPGHINPEHTRYELHRVWHVSATLKPGQRHVYSRRDLYIDEDSWQAAQADAYDGRGQLWRVSEGHASFFYDQQSPQYNAETHYDVLSGRYAVNALYNEEKQAYRFDQTFNRKQFTPSALRASGIR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0224 CDS 228248 230059 - hypothetical protein YP_001185730.1 146305265 5106191 PFAM: protein of unknown function DUF1302 Outer Membrane[Class 3] PF06980|DUF1302, Protein of unknown function (DUF1302)|18|603|0.0 ATGACAACAACAACCCGCCTCGGCGCCCTGCGTCCGACGGTCTTGAGCCTGGCCCTCGGCCTGGCTCCCACGCTGCCGGCGCAGGCCGCCAGCTTCAACATCGGCGAGATCGAGGCGCGCGTCGACTCCTCGCTGTCGATAGGCGCCAGCTGGGCGATGGACGCACCGGACAAGCGCTTCATCGGCCGCGCCAACGGCGGCACGGCCTCGACCCGCACCAGCGACGACGGCCGCCTCAACTTCAAGCGCGGCGAGACCTTTTCGAAGATCTTCAAGGGCATCCACGACCTGCAGCTCAGCTATGGCGACAGCGGCCTGTTCCTGCGCGGCAAGTACTGGTACGACTTCGAGCTCAAGGACGAGAGCCGCCTGCTCTACGATATCGACGACAGCGGCCGCGACCGCGCCGCCAAGGCCTCGGGCAGCGAACTGCTGGACGCCTTCGTCTACCACAACTACCAGCTCGGCGAGCTGCCCGGCAGCGTGCGCGCCGGTCGCCAGGTGGTCAGCTGGGGCGAGAGCACCTTTATCGGCAACGGCATCAACGCCATCAACCCGGCCGACGTCGCCGCCTTCCGCCGCCCCGGTTCGGAGATCAAGGAAGGCCTGATCCCGGTGAACATGCTCTACCTGACCCAAGGCCTGAGCGAGAACCTGTCGATCGAAGCCTTCTACCAGCTGCAGTGGGAGAAGACCGTGCTGGACAACTGCGGCACCTTCTTCGGCGGCGACGTCGCGCCCCAGGGCTGCGACCTGGGCATGACCACCTTCGGCAGCGACTTTAACCGCGACCCGGCGGTGTACGGCTGGGTGCCACGCCTGGCGGATAAGGAGGCGCGCGACGGCGGCCAGTTCGGCGTGGCGCTGCGCTGGCTGGTGCCGGCCCTGAACGACACCGAGTTCGGCGTTTACGCGCTGAACTACCACAGCCGCACCCCGGAAAGCTCGTGGCGCACCGGCCAGCCGAGCTTCGCCGCGATCAGTGGCGCCCCCGGCCCGGCCAGCGCCCGCTACGGCCTGGAATACCCCGAGGACATCCGCCTCTACGGTCTCAGCTTCGCCACCAGCCTGGCCAACGGTACAGCGCTGTCGGGGGAGATCAGCCATCGGCCGAACATGCCGCTGGCGCTCAACGGCACCGAGGTATCCACCGCCGCCAGCGTCGGCCAGCTGAACGACCTGCTCGGCCTCGACGGCCTGGCCATCTTCGACACTGGCTGGGCTGCCACCGCCCCGGGCAGCCGGGTACAGGGCTACAAGCGCATGCCCTTTACCCAGGCCCAGCTCAGCGCGGTGCAGGTGTTCGATCAGGTGCTGCGCGCCGACCGTCTGACCCTGGTCGGCGAAGTCGGCTTCAGCCATATCGGCGACCTCGGCCCCAGCGACGGCTCCGACCTGCGCTTCGGCCGCAGCAGCGTCTACGGCTACGGCGTGCTGCCGGACTCGGCCAGCGGCCTGGGCTTAAGCGGCAACCAGTTGTGCACCGCGCTGCTCAACAGCGCCAACCCGGACCAGTGCAGCGACAAGGGCTTCTACACCCAGAACTCCTGGGGCTACCGCCTGCGCGCCATGCTCGAGTTCAACAGCGCCATCGCCGGGGTCAACCTCAAGCCCAACCTGGCCTTCGCCCACGACGTCGAGGGCTACGGGCCGACCTTCACCGAGGGCAACCAGTCGCTCAGCATCGGCATCGACGCCGACTACCTGTCCAGGTACAGCGCCAGCCTGAGTTACACCGACTACTTCGGCGGCGACTTCAACACCAACACCGACCGCGACTTCGTCGCCCTGAGCTTTGGCGTCAGTTTCTGA MTTTTRLGALRPTVLSLALGLAPTLPAQAASFNIGEIEARVDSSLSIGASWAMDAPDKRFIGRANGGTASTRTSDDGRLNFKRGETFSKIFKGIHDLQLSYGDSGLFLRGKYWYDFELKDESRLLYDIDDSGRDRAAKASGSELLDAFVYHNYQLGELPGSVRAGRQVVSWGESTFIGNGINAINPADVAAFRRPGSEIKEGLIPVNMLYLTQGLSENLSIEAFYQLQWEKTVLDNCGTFFGGDVAPQGCDLGMTTFGSDFNRDPAVYGWVPRLADKEARDGGQFGVALRWLVPALNDTEFGVYALNYHSRTPESSWRTGQPSFAAISGAPGPASARYGLEYPEDIRLYGLSFATSLANGTALSGEISHRPNMPLALNGTEVSTAASVGQLNDLLGLDGLAIFDTGWAATAPGSRVQGYKRMPFTQAQLSAVQVFDQVLRADRLTLVGEVGFSHIGDLGPSDGSDLRFGRSSVYGYGVLPDSASGLGLSGNQLCTALLNSANPDQCSDKGFYTQNSWGYRLRAMLEFNSAIAGVNLKPNLAFAHDVEGYGPTFTEGNQSLSIGIDADYLSRYSASLSYTDYFGGDFNTNTDRDFVALSFGVSF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0225 CDS 230370 231347 + diguanylate cyclase with PAS/PAC sensor YP_001185731.1 146305266 5106192 TIGRFAM: PAS sensor protein ; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein Cytoplasmic Membrane[Class 3] biological_process|GO:0009966|regulation of signal transduction|IEA ; molecular_function|GO:0009975|cyclase activity|IEA TIGR00254|GGDEF|diguanylate cyclase (GGDEF) domain|domain|1.1e-48||Regulatory functions | Signal transduction|Small molecule interactions | Other PF08447|PAS_3, PAS fold|33|120|4e-11 ; PF00990|GGDEF, GGDEF domain|144|305|1e-47 COG3706|PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]. GTGAACCAAGCCATCGAAACCGACAGCGCGGTCTACAAGACCCTGCTCGAATCGACCCGGGCGATCCCCTGGAAGATCGACTGGAAGACCATGACCTTCGCCTACATCGGCCCGCAGATCGAGACGCTGCTGGGCTGGTCGCAGGCCAGTTGGGTCAGCGCCGAGGACTGGGCCGCGCGCATGCACCCGGAGGATCGCGAGCGGGTGGTGGGCTTCTGCGTGTCGCAGTCGCAGAACGGTGTCGACCACGAGGCCGACTACCGCGCGCTGACCGCCGCCGGCGACTACGTGTGGATTCGCGACGTGGTGCACGTGGTGCGCGACGACAAGGGCGAGGTGGACTCGCTGATCGGCTTCATGTTCGACATCAGCGAACGCAAGAAGACCGAGGAGCAACTGCTGACCCTGCAGAAGCAGCTGGAGGAATATTCCTACCAGGACGGCCTGACCGGCGTGGCCAACCGGCGCATGTTCGACCGGGTACTCGCCAGCGAGTGGGCCAGTGCCCAGCGCAGCCAGCAGCCGCTGTCGCTGATCCTGCTGGATATCGACCACTTCAAGCAGTACAACGATCATTACGGCCATGTTCAGGGTGATGACTGCCTGAAGAGCGTCGGCCAGGCCCTGACCCGCGCCGCCAGCCGCCCGCGGGACTTCGTCGGGCGCTTCGGTGGCGAGGAGTTCGTGCTGGTGCTGCCGGAAACCGACGAGGCCGCCGCCCGGCATATCGCCGAACGCTGTCGGCAGCAGGTGCGCCAGCAGCGCATTCCCCACGAGCGCTCCTCGGTGTCGTCCCTGCTCACCATCAGCCTGGGCGTGGGCACCCTGGTGCCGGGCGCGCAGGATCGGGCGCTGGATTTCCTCAACGCCGTCGACAAGCTGCTCTATCAGGCCAAGCAGCGCGGGCGTGACCGCCTGGAAGTGGCGAGCATGACCTCCCGATCTTCGGGGGGCGATGCCGCCGATGCCCGTGTTTGA MNQAIETDSAVYKTLLESTRAIPWKIDWKTMTFAYIGPQIETLLGWSQASWVSAEDWAARMHPEDRERVVGFCVSQSQNGVDHEADYRALTAAGDYVWIRDVVHVVRDDKGEVDSLIGFMFDISERKKTEEQLLTLQKQLEEYSYQDGLTGVANRRMFDRVLASEWASAQRSQQPLSLILLDIDHFKQYNDHYGHVQGDDCLKSVGQALTRAASRPRDFVGRFGGEEFVLVLPETDEAAARHIAERCRQQVRQQRIPHERSSVSSLLTISLGVGTLVPGAQDRALDFLNAVDKLLYQAKQRGRDRLEVASMTSRSSGGDAADARV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0226 CDS 231453 232058 + glutathione S-transferase domain-containing protein YP_001185732.1 146305267 5106193 PFAM: Glutathione S-transferase, N-terminal domain Cytoplasmic[Class 3] PF02798|GST_N, Glutathione S-transferase, N-terminal domain|1|75|4e-06 COG0625|Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]. ATGCAACTGATCTACGCCGCTGCCTCACCTTTCGCCCGCAAGGTCCGGATACTCGCCCATGAAACCGGTCTGCTGGCGCGCATCGAGCTGCTCGACACCACTGTGTTGCCGACTACTCTCAACGAGCAGGTCAACGCGCGCAATCCGCTGGGCAAGATTCCAGTGCTGCTCACCGATGACGGTGAGGCGCTTTACGACAGCAGGGTGATCTGCGAGTACCTCGACACTCTGCACGACGGTCCGCGCCTGCTGCCGCAGGACGATGCGCGCTGGTCGGTGCTGCGTCTGGCGGCGTTGGCCGACGGGCTGATGGATGCCGCCGTGCTGGCGCGCTACGAAAAGGCGGCGCGCAAACTCGAGCAGCAATCCCCGGCCTGGCTCGATGGCCAGCTGGGCAAGGTCAAGCGCGCCCTGGCGGAGCTGGAACGCCAGACCGAGCGGTTGCAGGGGCCCCTGGACATGGCGCAGATCGGCGTGGCCTGCGCCTTGGGCTATCTGGATTTCCGTTTTGCCGATCTCGACTGGCGCGCTGCGCATCCTCGCCTGGCCGCCTTTCAGCAGACCTTCGCCCAGCGCCCCTCGATGCAGGCCAGCGCCCCAGTCTGA MQLIYAAASPFARKVRILAHETGLLARIELLDTTVLPTTLNEQVNARNPLGKIPVLLTDDGEALYDSRVICEYLDTLHDGPRLLPQDDARWSVLRLAALADGLMDAAVLARYEKAARKLEQQSPAWLDGQLGKVKRALAELERQTERLQGPLDMAQIGVACALGYLDFRFADLDWRAAHPRLAAFQQTFAQRPSMQASAPV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0227 CDS 232306 233889 + aldehyde dehydrogenase YP_001185733.1 146305268 5106194 PFAM: aldehyde dehydrogenase Cytoplasmic[Class 3] biological_process|GO:0006527|arginine catabolic process|IEA ; molecular_function|GO:0016620|oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor|IEA TIGR03240|arg_catab_astD|succinylglutamic semialdehyde dehydrogenase|equivalog|3.1e-10|1.2.1.71|Energy metabolism|Amino acids and amines PF00171|Aldedh, Aldehyde dehydrogenase family|15|466|7e-45 COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ATGCTGAGTCTGACTGGCCACAACTACATCGGTGGTGAGCGCCGCGCCGCTGGCACCACCCTGCTCGAGAGCATCGATGCCAGCAGCGGTGAAGCGCTGCCCTACGCCTTCACCCAGGCCACGCCGGAGGAGGTCGACGCCGCCGCCCAGGCCGCCGCCGCCGCTTACCCGCTCTACCGCAACCTGTCGGCCGAGCGTCGCGCCGAATTTCTCGATGCCATCGCCGATGAGCTCGACGCCCTGGGCGATGACTTCGTCGCCCTGGTCACCCGCGAGACCGCACTGCCGGCTGCCCGCATCCAGGGCGAACGTGGTCGTACAAGTGGTCAGATGCGTCTGTTCGCCAATGTGCTGCGTCGCGGTGATTTCTACGGCGCGCGCATCGACCGCGCCCTGCAGGATCGTCAGCCGCTGCCGCGTCCGGATATCCGTCAGTACCAGATCGGTGTCGGCCCGGTTGCCGTGTTCGGTGCCAGCAACTTCCCGCTGGCCTTCTCCACCGCCGGTGGCGATACCGCGTCGGCCCTGGCTGCCGGTTGCCCGGTGGTGTTCAAGGCGCACAGCGGCCATATGGCCACTGCCGAGTGCGTAGCCGATGCGGTTATCCGCGCGGCCGAGAAAACCGGCATGCCCAAGGGCGTGTTCAACATGATTTTCGGCGGCGGTGTCGGCGAGCTTCTGGTCAAGCACCCGGCCATCCAGGCCGTCGGCTTCACCGGTTCGCTGAAAGGTGGTCGTGCCCTGTGCGACATGGCCGCTGCCCGTCCGCAGCCGATCCCGGTGTTCGCCGAGATGTCCAGCGTCAACCCGGTGATCGTCCTGCCGGGTGCCCTGAAGGCGCGTGGAGCCACCGTGGCCAAGGAGCTGGCTGGTTCCGTGGTCCTGGGTTGTGGTCAGTTCTGCACCAATCCTGGTTTGGTCATCGGTATTCGCAGCACCGAGTTCAGCGACTTCGTCGCAGGGCTTGGCGATGCCATCGCCAGCCAGCCGGCGCAGACCATGCTCAACGCCGGTACGCTGCGCAGCTACGCCAGCGGTGTGTCTCAGCTCAAGGCCCACGCCAAGGTCACCCACCTGGCGGGCAGCGAGCAGGCCGGCAACCAGGCGCAACCGCAGTTGTTCAAGGCCGACGTGAGCATGCTGCTCGAAGGCGACCACCTGCTGCAGGAAGAAGTCTTCGGCCCGACCACCGTCGTCGTCGAAGTCGCCGACAGCGCCGAGCTGACCCGTGCCCTGCAGAGCATGCACGGCCAGCTGACCGCGACCCTGATCGCCGAGCGTGACGACCTCAGCGCCTTCCGCGACCTGCTGCCGCTGCTGGAGGTCAAAGCCGGCCGCGTACTGCTCAACGGTTACCCGACCGGCGTGGAAGTCTGCGATTCGATGGTCCATGGCGGCCCGTACCCGGCGACTTCCGACGCCCGTGGTACCTCGGTAGGTACCCTGGCGATCCACCGCTTCCTGCGTCCTGTGTGCTACCAGAACTACCCGGACGAGGTACTGCCGGAGGCGCTGCAGAACGCCAACCCGCTGGGCATCCAGCGTCTGGTGGACGGCGTGCACAGCCGTGAAGCGCTGAGCTGA MLSLTGHNYIGGERRAAGTTLLESIDASSGEALPYAFTQATPEEVDAAAQAAAAAYPLYRNLSAERRAEFLDAIADELDALGDDFVALVTRETALPAARIQGERGRTSGQMRLFANVLRRGDFYGARIDRALQDRQPLPRPDIRQYQIGVGPVAVFGASNFPLAFSTAGGDTASALAAGCPVVFKAHSGHMATAECVADAVIRAAEKTGMPKGVFNMIFGGGVGELLVKHPAIQAVGFTGSLKGGRALCDMAAARPQPIPVFAEMSSVNPVIVLPGALKARGATVAKELAGSVVLGCGQFCTNPGLVIGIRSTEFSDFVAGLGDAIASQPAQTMLNAGTLRSYASGVSQLKAHAKVTHLAGSEQAGNQAQPQLFKADVSMLLEGDHLLQEEVFGPTTVVVEVADSAELTRALQSMHGQLTATLIAERDDLSAFRDLLPLLEVKAGRVLLNGYPTGVEVCDSMVHGGPYPATSDARGTSVGTLAIHRFLRPVCYQNYPDEVLPEALQNANPLGIQRLVDGVHSREALS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0228 CDS 233959 234732 - hypothetical protein YP_001185734.1 146305269 5106195 Unknown[Class 3] PF00561|Abhydrolase_1, alpha/beta hydrolase fold|67|247|1e-06 COG0596|MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]. ATGTTCAAAGCCAAGCCGCTGCTCCTCGCCCTGGCCATCGCCAGCCCCTTCTTCGCCCTGAGCGCCCAGGCCGCCGACGCCAAGCCCTCGGTAGTGATCGTCCACGGCGCCTTCGCCGACGGCTCCGATTGGGCCAAGGTCGTGCCGCTGCTGCAGGATAAGGGCATCAAGGTTACCGTGGTGCAGAACCCGCTGACCTCGCTGGCCGATGACGTGGCCGCCACCCAGCGCGTGCTGAACAACCAGGACGGCAACGTGGTGCTGGTCGGCCACTCCTGGGGCGGCACGGTGATCAGCCAGGCCGGTACCGACGACAAGGTGCGCAGCCTGGTCTATGTCGCGGCCTTCGCGCCGAATGCTGGTCAATCCACCGGCGAGCTCTACGGCGGCTATCCCACCGCGCCGGGCTCGAGCCAGATCGCGGCGGACAAGAACGGCTTCCTCTACCTGACGTCGCAGGGCATGGCCGCCGACTTCGCTCAGGATCTGCCTGCCAAGCAGACGGCGATCATGACCGCCACGCAGGGTCCGATCCGTGCTGCCGCCTTCGATGACCGCACCAGCGTCGCGGCCTGGAAGCAGAAGCCGTCCTGGTACATCGTTGCGAGCGACGACCGCATGATCGTGCCGCAGATGCAGCGCGACTTCGCCAAGAAGATCGGCGCGCAGACCACCGAAATCGCCGCCAGCCACGTGCCGCAGCAGTCGCGCCCGAGCGATGTGGCCAAAGTGATCATCCAGGCGGTGGAGAAAACCCAGGCCGCCGCCAAATAA MFKAKPLLLALAIASPFFALSAQAADAKPSVVIVHGAFADGSDWAKVVPLLQDKGIKVTVVQNPLTSLADDVAATQRVLNNQDGNVVLVGHSWGGTVISQAGTDDKVRSLVYVAAFAPNAGQSTGELYGGYPTAPGSSQIAADKNGFLYLTSQGMAADFAQDLPAKQTAIMTATQGPIRAAAFDDRTSVAAWKQKPSWYIVASDDRMIVPQMQRDFAKKIGAQTTEIAASHVPQQSRPSDVAKVIIQAVEKTQAAAK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0229 CDS 234834 236258 + putative metal dependent phosphohydrolase YP_001185735.1 146305270 5106196 PFAM: regulatory protein, LuxR Cytoplasmic[Class 3] TIGR03020|EpsA|transcriptional regulator EpsA|equivalog|2.8e-05||No Data|No Data PF00196|GerE, Bacterial regulatory proteins, luxR family|414|468|1e-12 COG2206|COG2206, HD-GYP domain [Signal transduction mechanisms]. GTGAATGACGCCGTCGCGCTGGAAGACGTCATGCTGGCACTGGCCATGGTCGGCGATCTGAGCATGGGCCAGCCCATCGATCAGTCGCGGCGTACCGCGCGCCTGGCGCAATGGCTGGCGCAGGCCTGTGGCGGTGATCGGGCGCAAATCGATGCGGCCCGGCAGGTGGCGCTGCTGCGCTGGTCCGGCTGTACCGCCAACGCCGATGGCTTCATGCGTCTGCTCGGCGACGACGTCGGCGGCCGCCGCGCCATGCTGGCGCAAACCCTCGATGCCGCAGGCCAGCGCGCCATGCTGCGCACCACGCCGCTGGCCCAGGTGCATTGCGAGGTCGCCGGCGATATCGCCCGCACCCTGGCGCTGGGGACGGAAGTCGAGCGTGGTCTGCGCCATATCTTCGAGTGCTTCGACGGCAGCGGTCGCCCGCTAGGCCTGCGTCACCCCGATGTCCCGCCGGTGGTGTATCAGGTCGTGTTGGCCGGCGATCTGGAAATCCTCTCACGGGCCCACGGCCTGGACGTGGCGCTGGAGTGGATCGGCGCGCAGGGTGATCGCCGTTATCCCGCTGTTCTTGCCGACCTGCTCGCCCGCCATGCCGCGGATTGGCTGCAAGCGCTGCGCACCCCCGAGGGCGTGCAGGCTGCCAGCGGGGCGGAGGTTCCACTGACCCTGGTGGGCGATGTGATCGACCTCAAACTGCCCTGGCTGGCCGGCTATTCACGCCAGGCCGCGAGCCTGGTGCGCGACGCTGCTCGGCTCTGGGGCTTGCCCGAAGCGCGCATCGAACTGCTGGCCAAGGCGGCGCTGATCCATGGCGTGGGCCGGGCGGCCGTGCCCAATCGAATCTGGAGCACGCCCGGACCGCTGCTCGACGGTGATCTCGAAGCGGTGCGCCTGGTGCCCTACTGGACGCACCGCGCCTGCAGCCAGATCGGCGGCCTGAACGAAGCCGGACAACTGGCTGCGCATGCCTACGAACGCCTGGATGGCAGCGGCTATTTCCGCTCGTTGAGTGGCGACGCCCTGCAGGTCGAACACCGTCTGCTGAGCGCCGCGCTGGCCTGGCTGGCGCTGCGTGGCGAACGCCCCTGGCGCGCTGCCTTCAGCGATGAGCAGGCCGCCCGCGTATTGCTGGATGAAGCCGAGCAGGGCCGCTTCGACCCACGCGCCTGCCAGGCGGTGATCAGCGCCGCGCATGGCGAGCAGGCACCGCTGGCCGGCAAGCCCGGCAACGGCCTGCTCAGCGAGCGCGAGACGCAGATTCTGCAGCGCATCAGCAGCGGGGCGAGCAACAAGGAAGTGGCGCGCGACCTGGGCATCAGCCCGAGCACGGTGCGCACCCATGTCGAGAGCGTATTCCGCAAGCTGCAGTGTTCGACGCGCGCGGCGGCGACCTTGAAGGCGCTGACGCTGGGCGTGATCTAA MNDAVALEDVMLALAMVGDLSMGQPIDQSRRTARLAQWLAQACGGDRAQIDAARQVALLRWSGCTANADGFMRLLGDDVGGRRAMLAQTLDAAGQRAMLRTTPLAQVHCEVAGDIARTLALGTEVERGLRHIFECFDGSGRPLGLRHPDVPPVVYQVVLAGDLEILSRAHGLDVALEWIGAQGDRRYPAVLADLLARHAADWLQALRTPEGVQAASGAEVPLTLVGDVIDLKLPWLAGYSRQAASLVRDAARLWGLPEARIELLAKAALIHGVGRAAVPNRIWSTPGPLLDGDLEAVRLVPYWTHRACSQIGGLNEAGQLAAHAYERLDGSGYFRSLSGDALQVEHRLLSAALAWLALRGERPWRAAFSDEQAARVLLDEAEQGRFDPRACQAVISAAHGEQAPLAGKPGNGLLSERETQILQRISSGASNKEVARDLGISPSTVRTHVESVFRKLQCSTRAAATLKALTLGVI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0230 CDS 236346 236660 + hypothetical protein YP_001185736.1 146305271 5106197 Cytoplasmic Membrane[Class 3] PF07119|DUF1375, Protein of unknown function (DUF1375)|17|100|8e-06 ATGGAAAAGGATTTCATGCTCAAGCGTATTTATCGAATCTTCGCGCTGGCCGTTCTGGTGAGCGCACTGTCTGGCTGCGGCACTCTGTTCGGACGCTCCTCAGGCGGCTCTTACGGGCCCGATTACTATTCCGGCACTGCCTACAACTTTGGCCTGCTGTTCGGCTCCGATGAACTCAATCGCGGTTACTTTCCTGCCACCCTCTGGTGCTGGGCCTCGATAGCCTGCCCGGTGTTGACGGTTTATTCGATGCCCGTGGATTTCGTCGTCGATACCGTCATGCTGCCCCGTGATATCTACGAGGCAACACGATGA MEKDFMLKRIYRIFALAVLVSALSGCGTLFGRSSGGSYGPDYYSGTAYNFGLLFGSDELNRGYFPATLWCWASIACPVLTVYSMPVDFVVDTVMLPRDIYEATR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0231 CDS 237746 239197 + gabD succinate-semialdehyde dehydrogenase I YP_001185737.1 146305272 5106935 TIGRFAM: succinic semialdehyde dehydrogenasePFAM: aldehyde dehydrogenase ; catalyzes the formation of succinate from succinate semialdehyde; NADP dependent Alanine, aspartate and glutamate metabolism [KEGG] ; Tyrosine metabolism [KEGG] ; Butanoate metabolism [KEGG] ; Metabolic pathways [KEGG] 1.2.1.16 Cytoplasmic[Class 3] biological_process|GO:0009450|gamma-aminobutyric acid catabolic process|IEA ; molecular_function|GO:0004777|succinate-semialdehyde dehydrogenase activity|IEA ; molecular_function|GO:0009013|succinate-semialdehyde dehydrogenase [NAD(P)+] activity|IEA ; molecular_function|GO:0016620|oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor|IEA TIGR01780|SSADH|succinate-semialdehyde dehydrogenase|subfamily|0||Central intermediary metabolism|Other PF00171|Aldedh, Aldehyde dehydrogenase family|19|476|1e-175 COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ATGCAACTGAAAGACCCCCAGCTGCTGCGCCAACAGGCCTATATCCATGGCCAGTGGCTGGACGCCGACAGCGGTCAGACCATCGCCGTGAACAACCCGGCCACCGGTGAGATCATCGGTCATGTGCCGAAGATGGGCCGTGCGGAGACGCGCCGTGCCATCGAGGCCGCCGAGAAGGCGCTGCCGGCCTGGCGTGCGCTGACTGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTTCGAGTTGCTGATGGAGAACCAGGATGACCTCGGTCGCCTGATGACCCTGGAGCAGGGCAAGCCGCTGGCCGAAGCCAAGGGCGAGATCGCCTATGCCGCCTCCTTTATCGAGTGGTTCGCCGAAGAAGCCAAGCGCGTCTACGGTGACGTGATTCCCGGCCACCAGCCGGACAAGCGCCTGATCGTGATCAAGCAGCCGATCGGCGTCACCGCCGCCATTACCCCGTGGAACTTCCCCGCTGCGATGATCACCCGCAAGGCCGGCCCGGCACTGGCCGCCGGTTGCACCATGGTGATCAAGCCGGCTTCGCAGACCCCGTTCTCCGCCCTGGCCCTGGTCGAGCTGGCCGAGCGCGCCGGCATCCCGAAAGGTGTGCTGAGCGTGGTCACCGGCAGCGCCGGCGAAGTCGGTGGCGAGCTGACCAGCAACCCCATCGTGCGCAAGCTGTCCTTCACCGGCTCGACCGAGATCGGTCGTCAGCTGATGGCCGAATGCGCCCAGGACATCAAGAAGGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTCTTTGATGACGCCGATCTGGATGCCGCAGTCGAAGGCGCGCTGATCTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACCGTATCTACGTGCAGGACGGCGTCTACGATGCCTTCGCCGAGAAGCTGATCGCCGCTGTATCCAAGCTGAAGATCGGCAACGGTCTGGAGGACGGCACCACCACCGGCCCGCTGATCGACGAGAAGGCCGTGGCCAAGGTGCAGGAGCACATCGCCGACGCGGTGAACAAGGGCGCCAAACTGGCCCTGGGCGGCAAGCCGCATGCCCTGGGTGGCACCTTCTTCGAACCGACCATTCTGGTGGACGTGCCGAAAACCGCTGCCGTGGCCAAGGAAGAGACCTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCAAGGACGAGGCCGAGGTGATCGCCATGGCCAACGATACCGAGTTCGGCCTGGCTTCCTACTTCTATGCCCGCGACCTGGGCCGCGTGTTCCGCGTGGCCGAGGCGCTGGAGTACGGCATGGTGGGCATCAACACCGGCCTGATCTCCAACGAAGTCGCGCCGTTCGGCGGCGTGAAGGCTTCCGGCCTGGGCCGCGAAGGCTCCAAGTACGGGATCGAGGACTACCTCGAGATCAAGTACATGTGCCTGGGCGGCATCTGA MQLKDPQLLRQQAYIHGQWLDADSGQTIAVNNPATGEIIGHVPKMGRAETRRAIEAAEKALPAWRALTAKERANKLRRWFELLMENQDDLGRLMTLEQGKPLAEAKGEIAYAASFIEWFAEEAKRVYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIKPASQTPFSALALVELAERAGIPKGVLSVVTGSAGEVGGELTSNPIVRKLSFTGSTEIGRQLMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRIYVQDGVYDAFAEKLIAAVSKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVNKGAKLALGGKPHALGGTFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMANDTEFGLASYFYARDLGRVFRVAEALEYGMVGINTGLISNEVAPFGGVKASGLGREGSKYGIEDYLEIKYMCLGGI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0232 CDS 239295 240617 + 4-aminobutyrate aminotransferase YP_001185738.1 146305273 5106199 TIGRFAM: 4-aminobutyrate aminotransferasePFAM: aminotransferase, class I and II ; catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate Alanine, aspartate and glutamate metabolism [KEGG] ; Valine, leucine and isoleucine degradation [KEGG] ; beta-Alanine metabolism [KEGG] ; Propanoate metabolism [KEGG] ; Butanoate metabolism [KEGG] ; Metabolic pathways [KEGG] 2.6.1.19 Cytoplasmic[Class 3] biological_process|GO:0009450|gamma-aminobutyric acid catabolic process|IEA ; molecular_function|GO:0003867|4-aminobutyrate transaminase activity|IEA TIGR00700|GABAtrnsam|4-aminobutyrate transaminase|equivalog|2.4e-194|2.6.1.19|Central intermediary metabolism|Other PF00202|Aminotran_3, Aminotransferase class-III|41|376|1e-114 COG0160|GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]. ATGCTGAACCGACCACTCGCCGGGGACGGCCATGAGGACACCATGAGCAAGACCAACGAATCCCTGCTGCAACGCCGTGCCGCCGCCGTACCGCGCGGTGTCGGCCAGATCCACCCGATCGTCGCCGAGCGCGCCGAGAACGCCACCGTGTGGGACGTCGAAGGCCGCGAGTACATCGACTTCGCCGGCGGCATCGCCGTGCTGAACACCGGCCACCTGCATCCGAAGGTGGTCGCCGCCGTTCAGGAGCAGTTGACCAAGCTGTCGCACACCTGCTTCCAGGTGCTGGCCTACGAGCCCTACATCGAGCTGTGCGAAGAGATCGCCAAGCGCGTGCCGGGCAACTTCGCCAAGAAGACCCTGCTGGTCACCTCCGGCTCCGAAGCCGTCGAGAACGCCGTGAAGATCGCCCGCGCCGCCACTGGCCGCGCCGGCGTGATCGCCTTCACCGGCGCCTACCACGGCCGCACCATGATGACCCTGTCGCTGACCGGCAAGGTGGTACCGTACTCCGCCGGCATGGGCCTGATGCCCGCTGGCGTGTACCGCGCCCAGGCACCGTGCCCGCTGCATGGCGTGAGCGAGGACGAGTCCATCGCCAGCATCGAGCGCATCTTCAAGAACGACGCGCAGCCGCAGGACATCGCCGCGATCATCATCGAGCCGGTGCAGGGCGAGGGCGGTTTCTACGTCAACTCCCCGGCCTTCATGCAGCGCCTGCGCGCGCTGTGCGACCAGCACGGCATCCTCCTGATCGCTGACGAAGTGCAGACCGGCGCGGGCCGTACCGGCACCTTCTTCGCCACCGAGCAACTGGGCGTGGTGCCGGACCTGACCACCTTCGCCAAGTCCGTCGGCGGCGGCTTCCCGATCTCCGGCGTGTGCGGCAAGGCCGAGATCATGGACAAGATCGCCCCCGGTGGCCTGGGCGGCACCTACGCCGGCAGCCCGATCGCCTGCGCCGCGGCCCTGGCCGTGCTCAAGGTGTTCGACGAGGAGAAACTGCTGGAGCGCAGCCAGGCCGTGGGCGAGAAGCTCAAGGCCGGCCTCAAGACCATCGCCGAGAAGCACAAGGTGATCGGTGACGTACGTGGCCTGGGTTCGATGGTCGCCATCGAGCTGTTCGAAGGCGGCGACCACAGCAAGCCGGCGGCCGAGCTGGTGGGCAAGATCGTCGCCCGTGCGCGCGAGAAGGGCCTGATCCTGCTGTCGTGCGGCACCTACTACAACGTCATCCGCTTCCTGATGCCCGTCACCATCCCGGACGCGCAACTGGAAAAAGGCATCGCCATCGTCGCCGAGTGCTTCGACGAGCTGGCCTGA MLNRPLAGDGHEDTMSKTNESLLQRRAAAVPRGVGQIHPIVAERAENATVWDVEGREYIDFAGGIAVLNTGHLHPKVVAAVQEQLTKLSHTCFQVLAYEPYIELCEEIAKRVPGNFAKKTLLVTSGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLSLTGKVVPYSAGMGLMPAGVYRAQAPCPLHGVSEDESIASIERIFKNDAQPQDIAAIIIEPVQGEGGFYVNSPAFMQRLRALCDQHGILLIADEVQTGAGRTGTFFATEQLGVVPDLTTFAKSVGGGFPISGVCGKAEIMDKIAPGGLGGTYAGSPIACAAALAVLKVFDEEKLLERSQAVGEKLKAGLKTIAEKHKVIGDVRGLGSMVAIELFEGGDHSKPAAELVGKIVARAREKGLILLSCGTYYNVIRFLMPVTIPDAQLEKGIAIVAECFDELA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0233 CDS 240881 242566 + hypothetical protein YP_001185739.1 146305274 5106200 Extracellular[Class 3] PF05819|NolX, NolX protein|115|462|5e-59 ATGCGTGTTTCAGGTTTCTCGAACTCGATTCCTCCCGCGCTCGACGGCCGTGAGCCATCCCGTGAGTGCGCAAAGCCCCAGGCACCGGCGAACCCGCGGCAATCTGCCTGTGGTGGCGGTGGCGTTTCTTGGGCGCCGCAAGGCCAGAGTCAGACCACGCCGAGTCACTCCGCTGCCGCCGGCGATACCCTGCGCGGTCAGGGGTTGGCGGCATTGAGAGAGGCGGTGCTGAGGCTGTTTGCGCCGAGCGCCACTGAAGTCCAGTCGGCCTCGCAACCGGCCACCCAACGCAATATGGCGGCGGAGGCGGCAAAGGAGAGCAGCGATGAGATGCCCTTCGAGGAAGTGGTCTCGGTCCTTGGGCGCAACGAGAACCTGTTAAAGAAGCCGCGTGATCGCGAAGGTCTGGAAAAGCTGCGCGACGACCCCAACACACCGACGGATGCGAAAAAGGCACTGGATGCGGTGCTGAAGAACCCCGCGTACTACGAAGCTCTGGATCAGGCGAAGACCGGAAGCACGGACGGCAAGATCAGCGCCAAGGACGTGCAGAAACTGCAGCAGCACCCGTTGATCAGGCAGTACGCCGACGCCAAGGCGGAAACCTACACCCACAACTACGTGCCTTCCGACGCTGCGCCCGGTTCTGCCGCGCGGGAGATGACCGAGAACGATGCAATGCGCGAGCTGTATCTGTACTCGGAAAGCCTGCCCAAGAAACTCAATCTGGAGACCCTCGGCAAGATCGCCGATGGTTCCCAGTCGATGGGCAAGTGCCCGCCGCAGGTCGCGGCCGCGGCGAAGTTCTTTGTCCAGAACCCGGACAAATGGCAGCAATTCAGCGGCAAGGATGATCCCTCGGCGAAGATCTCCCGCGATCGCCTGTGCGACCTGGCGACCGAGAACGTCAAGCTCTCACCCCAGGAGAGCAAGGCGCTGGAGACGCTCAAGAACAACCAGGACATCTTCTTCAAGGGCGGCGGCATCAAGCCGGACAAACTGGCCAAGATCGCCAACGACCCGCAACACAGCCAGGAGGTTCGCGATGCCGCCAACCTGCTGAGCCAGCCCAATTCGATGCTGTTCTCCATGCTCGACAACGCCAAGCATGGTGCCGGCGGCAATTTCTTCAACAAGGCCAATGACCGCAACATCAGCAAGGGCGACCTGAATGCCTTCCTGCAGAAAGGCAGTAACGAGGTCGCGGGCCCACCGCAGCTCGCCAAGCCCGCCACCGGCGCGGCGCTTGCGGCGCAGAACGATATGCACATGGGGCAGGAAACCCAGCCCGATCAGAAGAAGGAAAAGGGCGGCGGTATCTTCAAGTTCCTGGAAATCTTCAGCTATGTCGCCTCCGGCGTGATGATGCTGATTCCGGGCGCTGGCGCCGCCACCCTGGCCGCGACTGCAGGACGGGTCGCCGCGACTACCGTAGCGAAGGAGGCGGCCAAGCAGGCCGCCCAGCACACCGTGAAGGAGGTGGCCAAGGACACGGTCAAGGAAACCGCGAAACGAGAGTTCAAGGATGCCGCGATTCAGGGCACCAAGGATGGCTTGAAAGACTACGCCAAAGATCAGGCCAGGGACTTCGCCAAGGATGGCCTGAGCAATGCCATGAACCAGAACTCGCCCAGGGTCGCCTCCAATCCGCATGTCAACGAGCCGCGCGTGTGGGCGCAAAGCTGA MRVSGFSNSIPPALDGREPSRECAKPQAPANPRQSACGGGGVSWAPQGQSQTTPSHSAAAGDTLRGQGLAALREAVLRLFAPSATEVQSASQPATQRNMAAEAAKESSDEMPFEEVVSVLGRNENLLKKPRDREGLEKLRDDPNTPTDAKKALDAVLKNPAYYEALDQAKTGSTDGKISAKDVQKLQQHPLIRQYADAKAETYTHNYVPSDAAPGSAAREMTENDAMRELYLYSESLPKKLNLETLGKIADGSQSMGKCPPQVAAAAKFFVQNPDKWQQFSGKDDPSAKISRDRLCDLATENVKLSPQESKALETLKNNQDIFFKGGGIKPDKLAKIANDPQHSQEVRDAANLLSQPNSMLFSMLDNAKHGAGGNFFNKANDRNISKGDLNAFLQKGSNEVAGPPQLAKPATGAALAAQNDMHMGQETQPDQKKEKGGGIFKFLEIFSYVASGVMMLIPGAGAATLAATAGRVAATTVAKEAAKQAAQHTVKEVAKDTVKETAKREFKDAAIQGTKDGLKDYAKDQARDFAKDGLSNAMNQNSPRVASNPHVNEPRVWAQS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0234 CDS 242659 243186 + TetR family transcriptional regulator YP_001185740.1 146305275 5106201 PFAM: regulatory protein, TetR Cytoplasmic[Class 3] PF00440|TetR_N, Bacterial regulatory proteins, tetR family|7|53|3e-09 COG1309|AcrR, Transcriptional regulator [Transcription]. ATGAATATCGATTCAAAGCTGATTTCAACGGCCGAAGAGCTGTTCGGCCGATACGGTTTCAACGCCACCGGCATGGATCGGCTGGCGCAGGCTGCCGGCATGTCGAGCCGTACGCTGTACAAGCATGCCGGCAGCAAGAATGAGCTTATCGCGGCTGTGCTGATGACGCGTGGGCAGCGTTTCCTGCAGCGTCTCGAGGTAGACAGCGTCGAGGCGCTGTTCGATGCACTGGCGAGCTGGCTGCGCGAGGAAGGGGCACGCGGCTGCCTGTTTCTGCGCGTGCAGGGCGAAACCGGCGGTCAGATACGCGAGATCAGCGAAGCCGTCGCCGCCTACAAGGCGCGTTTCAGCGACGCGGTTCACCAGGTGCTGACGCGACAACTCGGCACCGGCGTCGAGGATGAGCTGGTCGAGCAGATCGTCATCCTCTTCGAGGGGGCGACGGCCGCCGCCAGCTACCGTGGCGTGGAGGCGGTGGCGGTGGCGCGCAGGGCTGCGACCTTGCTGCTGCGGCAGGTGCGACCTTGA MNIDSKLISTAEELFGRYGFNATGMDRLAQAAGMSSRTLYKHAGSKNELIAAVLMTRGQRFLQRLEVDSVEALFDALASWLREEGARGCLFLRVQGETGGQIREISEAVAAYKARFSDAVHQVLTRQLGTGVEDELVEQIVILFEGATAAASYRGVEAVAVARRAATLLLRQVRP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0235 CDS 243183 244319 + major facilitator transporter YP_001185741.1 146305276 5106202 PFAM: major facilitator superfamily MFS_1 Cytoplasmic Membrane[Class 3] PF07690|MFS_1, Major Facilitator Superfamily|12|339|2e-09 COG2814|AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. TTGAGCCCCGCGCTGCGCCTAGGCATCACCGGATTCGGCCTGATCGGCGTGTGCTACGGCTTCGCCCGCTTCGCCTTCGGGCTGTTTCTGCCACAGATCGATGCCGAGCTCGACCTGCCGGCGGCCGTGGGCGGCCTGATCGCCGGCGGCTCGTTCCTGGGTTACTGCATCGCCATCGTCGTCGCCGCGCAGCTGACCGAGCGGGTCGGCGCGCGAGCCGTGGCCATGGCTGCCGGGCTGATCGCCGCGCTGGGCATGCTCGGCATCGCCCTGGCACCCTCGGCGCTCTGGCTTGCCGCGGCGGTGCTGCTGGCCGGAATCAGCACCGGGCTGGTGTCGCCCCCCATGGCCGCCGCCGTGGCGGCCATCGTACAGCCGCAGCGGCAGGATGCGGCCAATACCCTGATCAATTCCGGAACCAGCGCCGGGGTGATCCTCTCCGGTCCGGTGGCGCTGCTGATCGGTGCCGAGTGGCGGCTGGCCTATGGCGTGTTCGCCGCCTCGGCGCTGGTCCTGGCGGTGCTGGCCGGCTTCTGCGTGCCGAATACGGCCGGGCCGCGAGCGCAGCCTTCGCCCGGTCGGCCCGTGCTCAATGCCATGCTCAGGCAACTGATCGTCGCGTCCTTGTTGATGGGCGCGGCCAGTACGGCGCTGTGGTCGTTCGGCAGCCAGATCCTGGCGCAGCGCCTGGACTGGGGCAGTGCCGGGGCCGGCCTGCTCTGGGTGGTCATCGGCGTTGCCGGCATCGCCGGCGCTGGCGCCGGCAGCCTGATCGGCAGGCTGGGTATCGACTGGGTGCACCGCCTGTCGCTGGCTGCGATGGCCTTGGCCATCCTTCTGGTCGGCATGGGGACCCAGCCGGCCCTGACACTGGTTGGCGGCGTGCTGTTCGGCGCGGCGTACATCATGCTCACCGGCGTGTATCTGGTCTGGGGCGTGTGCGCGCTGCCCGAGCGCCCGGCCACCGGGCTGACCATCAGCTTTCTCAGCATCGCCATCGGCCAGATGCTCGGCGCGCCGGCCTTCGGTCTGCTGCTGAGCTGGCTGACCCTGGATCATGCGGTGATCGTCTTCACCCTGCTGGCGCTTGCCGGCGGCCTGGCGCGTTCGGCCGGCGCCCGTGCTCCAGGTGCGTGA MSPALRLGITGFGLIGVCYGFARFAFGLFLPQIDAELDLPAAVGGLIAGGSFLGYCIAIVVAAQLTERVGARAVAMAAGLIAALGMLGIALAPSALWLAAAVLLAGISTGLVSPPMAAAVAAIVQPQRQDAANTLINSGTSAGVILSGPVALLIGAEWRLAYGVFAASALVLAVLAGFCVPNTAGPRAQPSPGRPVLNAMLRQLIVASLLMGAASTALWSFGSQILAQRLDWGSAGAGLLWVVIGVAGIAGAGAGSLIGRLGIDWVHRLSLAAMALAILLVGMGTQPALTLVGGVLFGAAYIMLTGVYLVWGVCALPERPATGLTISFLSIAIGQMLGAPAFGLLLSWLTLDHAVIVFTLLALAGGLARSAGARAPGA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0236 CDS 244394 244753 - protein of unknown function DUF861, cupin_3 YP_001185742.1 146305277 5106203 PFAM: protein of unknown function DUF861, cupin_3 Unknown[Class 3] PF05899|Cupin_3, Protein of unknown function (DUF861)|40|113|7e-23 COG3450|COG3450, Predicted enzyme of the cupin superfamily [General function prediction only]. ATGAACATCGAGCAGATCGTCGACTTCGCCCAGGCCGCCACGGCCGCCGACCACTATCGCCCCGCCCCGGAGAAAGTGCTCAAGGGCGACCCCGAGCAGAGCGTGCGCAACCACTACGGCAGCCCCTGTGGCCAGTTCAGCAGCGGCATCTGGGAAGGCGCGGTGGGCCAGTGGACGGTGAACTACACCGAGCATGAATACTGCGAGATTCTCCAGGGTGTTTCCGTATTGCGCGATGCCGATGGCAACGCCAAGACCGTACGCGCCGGCGACCGCTTCGTCATCCCTGCCGGCTTCTCCGGTACCTGGGAGGTGCTGGAAGCCTGCCGCAAGGTCTATGTGATCTTCGAGCCCAAGTAA MNIEQIVDFAQAATAADHYRPAPEKVLKGDPEQSVRNHYGSPCGQFSSGIWEGAVGQWTVNYTEHEYCEILQGVSVLRDADGNAKTVRAGDRFVIPAGFSGTWEVLEACRKVYVIFEPK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0237 CDS 245006 246499 + aldehyde dehydrogenase (acceptor) YP_001185743.1 146305278 5106204 PFAM: aldehyde dehydrogenase Arginine and proline metabolism [KEGG] ; Metabolic pathways [KEGG] 1.2.99.3 Cytoplasmic[Class 3] biological_process|GO:0006578|betaine biosynthetic process|IEA ; molecular_function|GO:0008802|betaine-aldehyde dehydrogenase activity|IEA TIGR01804|BADH|betaine aldehyde dehydrogenase|equivalog|1.8e-170|1.2.1.8|Cellular processes|Adaptations to atypical conditions PF05893|LuxC, Acyl-CoA reductase (LuxC)|151|326|7e-05 ; PF00171|Aldedh, Aldehyde dehydrogenase family|33|492|1e-168 COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ATGACTAGCCTGACCCGTGCCGACTGGGAACAGCGTGCCAAGACCCTGACCATCGAAACCCGCGCCTTCGTCCACGGCGAATATCGCGCGGCAGAGTCCGGTGCGACCTTCGAATGCATCAGCCCGGTCGACGGTCGTCTGCTCGGCCTGGTGGCCAGCTGCGACCAGGCCGACGCCGAACTGGCGGTCAAGGATGCGCGCGCCACCTTCGAGTCCGGCGTGTGGTCGCGCCTGGCCCCGGTCAAGCGCAAGAAGGTGATGATCCGCTTCGCCGAGCTGATCGAGCAGCACGGCGAGGAGCTGGCCCTGCTGGAAACCCTGGACATGGGCAAGCCGATCAGCGATTCGCTGAGCATCGACGTGAGCAGCGCCGCCAACGCCATTCGCTGGAGCGGCGAGGCCATCGACAAGATCTACGACGAAGTCGCCGCCACCGCCCATGACGAGCTGGGCCTGGTCACCCGCGAGCCGGTTGGCGTGGTCGCCGCCATCGTGCCGTGGAACTTCCCGCTGCTGATGACCTGCTGGAAGCTCGGCCCGGCGCTGGCCACCGGCAACTCCATCATCCTCAAGCCCTCCGAGAAGTCGCCGCTGACCGGTATCCGCATCGCCCAGTTGGCCATCGAGGCCGGCATTCCGGCCGGCGTGTTCAACGTGCTGCCGGGTTTCGGTCACACCGTCGGCAAGGCCCTGGCCCTGCACATGGACGTCGACACCCTGGTGTTCACCGGCTCGACCAAGATCGCCAAGCAGCTGATGGTCTATGCCGGCGAATCGAACATGAAGCGCGTCTGGCTGGAAGCCGGCGGCAAGAGCCCGAATATCGTCTTCGCCGACGCGCCGGACCTCAAGGCCGCTGCCGAGGCGGCCGCCAGCGCCATCGCCTTCAACCAGGGCGAGGTCTGCACCGCCGGCTCGCGCCTGCTGGTGGAGAATTCCATCAAGGACACCTTCGTGCCCATGGTGGTCGAGGCGCTCAAGGCCTGGAAACCGGGCAACCCGCTGGACCCGGCGACCAATGTCGGTGCGCTGGTCGACACCACGCAGATGAACAACGTGCTGAGCTACATCCAGGCCGGCCACGACGACGGCGCCAAGCTGGTCGCCGGTGGCAAGCGAGTAATGGAAGAGACCGGCGGCACCTACGTCGAGCCGACCATCTTCGACGGCGTGAACAACGCCATGCGCATCGCCAAGGAGGAAATCTTCGGCCCGGTGCTGTCGGTGATCGGTTTCGACAATCAGGACGAGGCCATCGCCATCGCCAACGACACCATCTACGGCCTGGCCGCGGCGGTGTGGACCAGCAACCTGTCGCGCGCTCACCTGGTGGGCAAGGCCCTGCGTGCCGGCAGCGTGTGGATCAACCAGTACGACGGCGGCGACATGACCGCGCCGTTCGGCGGCTTCAAGCAGTCCGGCAACGGCCGCGACAAGTCGCTGCACGCGTTCGACAAGTACACCGAGCTGAAGTCCACCTGGATCAAGCTGTAA MTSLTRADWEQRAKTLTIETRAFVHGEYRAAESGATFECISPVDGRLLGLVASCDQADAELAVKDARATFESGVWSRLAPVKRKKVMIRFAELIEQHGEELALLETLDMGKPISDSLSIDVSSAANAIRWSGEAIDKIYDEVAATAHDELGLVTREPVGVVAAIVPWNFPLLMTCWKLGPALATGNSIILKPSEKSPLTGIRIAQLAIEAGIPAGVFNVLPGFGHTVGKALALHMDVDTLVFTGSTKIAKQLMVYAGESNMKRVWLEAGGKSPNIVFADAPDLKAAAEAAASAIAFNQGEVCTAGSRLLVENSIKDTFVPMVVEALKAWKPGNPLDPATNVGALVDTTQMNNVLSYIQAGHDDGAKLVAGGKRVMEETGGTYVEPTIFDGVNNAMRIAKEEIFGPVLSVIGFDNQDEAIAIANDTIYGLAAAVWTSNLSRAHLVGKALRAGSVWINQYDGGDMTAPFGGFKQSGNGRDKSLHAFDKYTELKSTWIKL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0238 CDS 246805 247953 + major facilitator transporter YP_001185744.1 146305279 5106205 PFAM: major facilitator superfamily MFS_1 Cytoplasmic Membrane[Class 3] PF07690|MFS_1, Major Facilitator Superfamily|9|338|5e-14 COG2814|AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. ATGCGTTGGGGAACCTATTTCGCAGTCTGCGCCGCGGTGATCAGCATCGGTCTGGCGCTGGGCGTGACCATGCCGCTGGTGTCGCTGCGCCTGGAGAGCTGGGGCTACGACTCCTTCGCCATCGGCGTGATGGCGGCCACGCCGGCGGTCGGGGTGCTGCTCGGCGCCTCGCTGGCCGGGCGCCTGGCCGCACGCGTCGGCACCACCAGGCTGATGCAGCTGTGCCTGCTGCTGGGTGCGCTGTCGGTGGCGTTGCTGGCGCTGGTGCAGAACTACGCGGTGTGGGTGGCCCTGCGTTTGTTCCTCGGCGTAGCCCTGACCGTAGTGTTCATCCTCGGCGAGAGCTGGATCAACCAGCTGGCCGTGGAGAAGTGGCGGGGGCGTCTGGTGGCCCTGTATGGCACCGGTTATGCGCTCAGTCAGCTCAGTGGCCCGCTGCTGCTGACGGCCATCGGCACCGCTACCGACAGCGGCTTCTGGACGGGCGTCGGCCTGCTGATCGGCGGCTCGCTGGTGCTGCTCGGGCGCAGCGGTGCGCCCCGCGTCGATGCGCACAGCGCCTCGGGCCGCGGCCTGCCGGCATTCTGCCGCAAGCTGCCGGCGATCGCCTGGGCGGTGGTGCTGTTCGCCGCCTTCGAGGCGATGATGCTCACCCTGCTGCCGATCTACGGCCTGCGCCAGGGCTTTACCCAGGAGGTGGCGCTGCTGATGGTCAGCGTGGTGGTGGTCGGCGATGCGGCGCTGCAGCTGCCGATTGGCTGGCTGGCCGACCGCATGTCGCGGCAGACCCTGTTCCGCGCCTGCGGCGTGGTGCTGCTGTCGTCGAGCCTGGCGATCCCGGTGCTGCTGCACACACCGGTGATCTGGCCCGTGCTGGTGGCCTTCGGCGCCAGCGCCGGCGGTCTGTTCACCCTGTCGCTGATCCTGATCGGCGAGCGCTATCGCGATGACGAGCTGGTGCGCGCCAATGCCCATGTCGCCCAGCTCTGGGGCATCGGTTGCCTGATCGGGCCGCTGGCCACCGGCGCGGTCAGCCAGTGGGTCAGCGGCCACGCCCTGCCGCTGATGATGGCGCTCGGTGCGGCCGGTTTCATCGTGCTGGCGTTTCGCGGCTCGCTCGGCTCCGATCTGGCGCAGGCCGAGCGCTGA MRWGTYFAVCAAVISIGLALGVTMPLVSLRLESWGYDSFAIGVMAATPAVGVLLGASLAGRLAARVGTTRLMQLCLLLGALSVALLALVQNYAVWVALRLFLGVALTVVFILGESWINQLAVEKWRGRLVALYGTGYALSQLSGPLLLTAIGTATDSGFWTGVGLLIGGSLVLLGRSGAPRVDAHSASGRGLPAFCRKLPAIAWAVVLFAAFEAMMLTLLPIYGLRQGFTQEVALLMVSVVVVGDAALQLPIGWLADRMSRQTLFRACGVVLLSSSLAIPVLLHTPVIWPVLVAFGASAGGLFTLSLILIGERYRDDELVRANAHVAQLWGIGCLIGPLATGAVSQWVSGHALPLMMALGAAGFIVLAFRGSLGSDLAQAER Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0239 CDS 248041 248994 + OmpA/MotB domain-containing protein YP_001185745.1 146305280 5106206 PFAM: OmpA/MotB domain protein Outer Membrane[Class 3] cellular_component|GO:0009279|cell outer membrane|IEA TIGR02802|Pal_lipo|peptidoglycan-associated lipoprotein|equivalog|9.5e-12||No Data|No Data PF00691|OmpA, OmpA family|212|308|3e-22 COG2885|OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]. ATGCGCATCATCGCTGGGCTGTGCCTGGGAATGCTGTGGGCGGCCGGGGCCGCGGCGGACATCGCCGGTAGCGCCGATCACCCGGCCATCCCCCGTTACGAAGGGGCGGAAATCTACGCCTACCAGACCCAGGCCTATACCGACTGGCGCTTCTTCAGAGCGCCGGCGACCGTCTATGGCGGCCTGCAGAAGAACCTCGACGCCACCGAGACGCTGGAAGGCAAGCTGACCCGTCTGAGCTATCGCGCGCCGGCCGAGCGCACGCCGCTGGAGGTGTTTCGCAACTACCAGCAGGCGCTGAGCGAGGCCGGTTTCGAGACGCTCTACAGTTGCGAACGCGAGGACTGCGGCGGGCGCAACTTCAACCACGCCATCACCCTCGACATGCACTTTCGCGAGTACCACCAGGATCAGCGCTATCTGTATGCCCGCCTGCCACGCCCCGAGGGGGATCTGTATGCCGCTCTCTACGTGGTGCTCAATCAGTCCGGCGGCGGGCCGAACAAGGGCCGCAGCCTGATCCAGCTGGACGTGCTCGAGCGCAAGGCGATGGAGCAGCGCATGGTGCTGGTCGAGGCGGGCGAGTTGCAGCGTGGCCTGGACGCTCAGGGGCGGGTGGCGCTGTATGGTCTGTATTTCGATACCGACAAGGCGGACATGCGCGCCGACTCGCAGCCGCAGCTGGCCGAGATCGCCAAGCTGCTGCAGGCCAGCGCGCAGTTGCAGGTGCTGGTGGTGGGGCATACCGACGCCCAGGGTGCGCTGGATTACAACCGTGACCTGTCGCAGCGCCGGGCGCAGTCGATCGTCGAAGCCCTGGTCAGCCAGCACGGTATCGCCCGTCAGCGGCTGAGCGCGGTGGGCGTCGGCATGGCGGCGCCGGTGGCGAGCAACCGCGACGAGGCCGGGCGTGCGCTCAACCGGCGGGTGGAACTGGTGGAGCGCCTGCCCTGA MRIIAGLCLGMLWAAGAAADIAGSADHPAIPRYEGAEIYAYQTQAYTDWRFFRAPATVYGGLQKNLDATETLEGKLTRLSYRAPAERTPLEVFRNYQQALSEAGFETLYSCEREDCGGRNFNHAITLDMHFREYHQDQRYLYARLPRPEGDLYAALYVVLNQSGGGPNKGRSLIQLDVLERKAMEQRMVLVEAGELQRGLDAQGRVALYGLYFDTDKADMRADSQPQLAEIAKLLQASAQLQVLVVGHTDAQGALDYNRDLSQRRAQSIVEALVSQHGIARQRLSAVGVGMAAPVASNRDEAGRALNRRVELVERLP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0240 CDS 248995 250416 - GntR family transcriptional regulator YP_001185746.1 146305281 5106207 PFAM: regulatory protein GntR, HTH ; PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II Cytoplasmic[Class 3] biological_process|GO:0006559|L-phenylalanine catabolic process|IEA ; biological_process|GO:0006572|tyrosine catabolic process|IEA ; molecular_function|GO:0004838|tyrosine transaminase activity|IEA TIGR01264|tyr_amTase_E|tyrosine aminotransferase|equivalog|6.7e-09|2.6.1.5|Energy metabolism|Amino acids and amines PF01212|Beta_elim_lyase, Beta-eliminating lyase|184|275|8e-06 ; PF00155|Aminotran_1_2, Aminotransferase class I and II|104|459|5e-31 ; PF00392|GntR, Bacterial regulatory proteins, gntR family|3|66|1e-12 COG1167|ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]. ATGACGCTCTACCTGAACCTCGCCGAAGAACTGGCCGCCCGCATCGAGCAGGGGCTGTTCCGTCCCGGTGAACGTCTGCCTTCGGTGCGCACCCTGAGCCAGGAGCACGGCGTCAGCCTCAGCACCGTACAGCAGGCCTACCGCCAGCTGGAGGATCAGGGCCTGGCCACGCCACGGCCGAAGTCCGGTTATTTCGTCAACCAGCTGCGCCAGCAGCCGGAGCTGCCGCAGATCAGCCGCGCGCCGCAACGCCCGGTGGAGGTCTCGCAGTGGGAGCAGGTGCTGGAGCTGGTCAGCGAGCCGCCCAGCAGCGACGTGCTGCAGCTCAGCCGGGGCATTCCCGACATCGACGTGCCCACGCTCAAGCCGCTGCTGCGCAGCCTGTCGCGACTGAGCCGACGACAGAGCCTGCGCGAGCTGAGCTACGGAGCGGTCGAGGGGGAAATCAGCCTGCGCCAGGAAGTCGCCCGCCTGACGCTGGACTCCGGCTGCCAGCTGGCCGCCGAGGACATCGTCATCACCACCGGCTGTCATGAGGCGCTGTCGGCGGCGCTGCGCGCCATCTGCCAGCCCGGCGACATCGTCGCGGTGGATTCGCCGAGCTTCCACGGGGTGATGCAGGCGCTCAAGGGCTTCGGCATGAAGGCCCTGGAACTGCCCACCGACCCGCTTACCGGAATCAGCCTGGAGGCTTTGGAGATGGCCCTGGAGCAATGGCCGATCAAGGCCATCCAGCTCACCCCCAGCTGCAACAACCCGCTCGGTTACGTGATGCCGGAAGCCAACAAGCGCGCCCTGCTGGCGCTGGCGCAGCGCTTCGACGTGGCGATCATCGAGGACGATATCTACGGCGACCTCGCCTATCACTACCCGCGCCCGCGCAGCATCAAGTCGTTCGACGAGGACGGTCGCGTGCTGCTGTGCAGCTCCTTCTCCAAGACCCTGGCGCCCGGCCTGCGCATCGGCTGGATCGCCCCCGGCCGCTACCTGCAGCAGGTGCTGCACATGAAGTACATGGGCACCGGGATGAGCGCCCAGCTGCCGCAGCTGGCGATCGCCGAATTCATTCGCGACGGCCTGTACCAGCCGCACCTGCGCCAGATGCGCAAACAGTACGCCCGCGGCCGCGAACAGATGACCGGTTGGGTCAGCCGCTATTTTCCGCCGGGTACTCGGGTCAGCCAGCCGCAGGGCGGCTTCATGCTCTGGGTGGAGATGCCGCAGGGCTTCGACAGCCTGCGCCTCAATCGCCGCCTGGCCGCATCCAAGCTGCAGGTGGCGCCCGGCAGCATCTTTTCCGCAGCGGGCAAGTACCGCAACTGCATCCGCCTGAACTTCGCCTGCAGCCATCAGCCGAGCATGGAGGCGGCGATTCGTCAGGTCGGCGAAACCGTTACCCTGCTGCTGGCCGAAGACGCCTGA MTLYLNLAEELAARIEQGLFRPGERLPSVRTLSQEHGVSLSTVQQAYRQLEDQGLATPRPKSGYFVNQLRQQPELPQISRAPQRPVEVSQWEQVLELVSEPPSSDVLQLSRGIPDIDVPTLKPLLRSLSRLSRRQSLRELSYGAVEGEISLRQEVARLTLDSGCQLAAEDIVITTGCHEALSAALRAICQPGDIVAVDSPSFHGVMQALKGFGMKALELPTDPLTGISLEALEMALEQWPIKAIQLTPSCNNPLGYVMPEANKRALLALAQRFDVAIIEDDIYGDLAYHYPRPRSIKSFDEDGRVLLCSSFSKTLAPGLRIGWIAPGRYLQQVLHMKYMGTGMSAQLPQLAIAEFIRDGLYQPHLRQMRKQYARGREQMTGWVSRYFPPGTRVSQPQGGFMLWVEMPQGFDSLRLNRRLAASKLQVAPGSIFSAAGKYRNCIRLNFACSHQPSMEAAIRQVGETVTLLLAEDA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0241 CDS 250578 250796 + hypothetical protein YP_001185747.1 146305282 5106208 PFAM: protein of unknown function DUF1127 Unknown[Class 3] COG5457|COG5457, Uncharacterized conserved small protein [Function unknown]. ATGCGTACCTTCGATGAAATGGCCGGTGTGGCGGGCGGCAGTGCCCGGACTGTGCGGCCCTGCCAGCCCCGCAGCTTCGGTCGCGACTGGCCGAGCTTCTGGCGGCGCCTGCGCACTCGCCGGGCGCTGCTGCGTCTGAGCGATCAGGCCCTGGCCGATGTCGGCCTGACCCGCGCCCAGGCCGAGCGCGAGGCACGTCTGCCGTTCTGGCAGCTATGA MRTFDEMAGVAGGSARTVRPCQPRSFGRDWPSFWRRLRTRRALLRLSDQALADVGLTRAQAEREARLPFWQL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0242 CDS 250803 252116 - FAD dependent oxidoreductase YP_001185748.1 146305283 5106209 PFAM: FAD dependent oxidoreductase Cytoplasmic[Class 3] TIGR03329|Phn_aa_oxid|putative aminophosphonate oxidoreductase|hypoth_equivalog|1.3e-11||No Data|No Data PF01946|Thi4, Thi4 family|36|83|1e-05 ; PF01266|DAO, FAD dependent oxidoreductase|39|392|8e-55 ; PF03486|HI0933_like, HI0933-like protein|39|72|9e-05 COG0665|DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]. ATGAACGCCCGCGTTCACCAGCCCGTCCATGGACCGCAGCACGCCGCCTCCTATTACGCCGCCAGCGTCAATCGCCAGTTGGCCTACCCGCCGCTGGGCGGCGAGTTGCAGGTGGATGTGTGCGTGGTCGGTGGCGGCTTCAGCGGCCTGAACACCGCCATCGAGCTGGCGCAGAAGGGCCTGTCGGTAGCGCTGCTGGAGGCGCGCAAGATCGGCTGGGGCGCCAGCGGGCGTAACGGCGGACAGCTGATCCGCGGCGTCGGCCATGGCGTCGAGCAGTTCGAGTCGGTGGTCGGCAAGGACGGCGTGCGTCAGTTCAAGCTGATGGGTCTGGAGGCGGTGGAGATCGTGCGCAGCCGCGTGGCGCAGTTCCAGATCGACTGCGACCTGACCTGGGGCTATTGCGACCTGGCCAACAAGCCGTCCCATATGCAAGGTTTCGCCGAGGACAAGGCGGAGCTGGAAAGCCTCGGCTACCGCCACGAGCTGCGCCTGGTGCCGAAGGAGCGCATCCATGAGGTGGTCGGCTCGGACAACTATCACGGCGCCATGATCGACATGGGCTCGGGCCATCTGCACCCGCTCAACCTCGCCCTGGGCGAAGCGGCTGCCGCCCAGGGGCTGGGGGTGCGGCTGTTCGAGGACTCGCCGGTGACCCGCATCGACTACGGCCCCGAGGTTCGCGTGCACACCGCCCACGGCCGGGTACGGGCCAGGCATCTGGTGCTGGCCTGCAACGCCTACATCAACGGCCTCAACCCGCACCTGAGCGGCAAGGTGCTGCCCGCCGGCAGCTACGTGATCGCCACCGAGCCGCTGTCCGAGGAGCAGGCGCGTCAGTTGATCCCACAGAACATGGCGCTGTGCGACCAGCGCGTGACGGTGGACTACTACCGCCTCTCGGCCGACCGTCGTCTGCTGTTCGGCGGCGCCTGTCATTACTCCGGGCGCGACCCGGCGGACATCGCCGCCTACATGCAGCCGAAGATGCTCAAGGTCTTCCCGCAACTGCAGGGCGTGCGCATCGACTACCAGTGGGGCGGCATGATCGGCATCGGCGCCAACCGCCTGCCGCAGATCGGCCGCCTCAAGGATCAGCCCAACGTGTTCCACGCCCAGGCCTACTCGGGGCATGGCCTCAACGCCACGCACCTGGCCGGCAAGCTGCTCGCCGAAGCCATCGCCGGGCAGGAGAGTCGCGGCTTCGATCTGTTCGCTCAGGTGCCGCACATGACCTTCCCTGGCGGCCGCTACCTGCGCTCGCCGCTGCTGGCGCTCGGCATGTTCTGGCACCGACTCAAGGAAGTGCTGTAG MNARVHQPVHGPQHAASYYAASVNRQLAYPPLGGELQVDVCVVGGGFSGLNTAIELAQKGLSVALLEARKIGWGASGRNGGQLIRGVGHGVEQFESVVGKDGVRQFKLMGLEAVEIVRSRVAQFQIDCDLTWGYCDLANKPSHMQGFAEDKAELESLGYRHELRLVPKERIHEVVGSDNYHGAMIDMGSGHLHPLNLALGEAAAAQGLGVRLFEDSPVTRIDYGPEVRVHTAHGRVRARHLVLACNAYINGLNPHLSGKVLPAGSYVIATEPLSEEQARQLIPQNMALCDQRVTVDYYRLSADRRLLFGGACHYSGRDPADIAAYMQPKMLKVFPQLQGVRIDYQWGGMIGIGANRLPQIGRLKDQPNVFHAQAYSGHGLNATHLAGKLLAEAIAGQESRGFDLFAQVPHMTFPGGRYLRSPLLALGMFWHRLKEVL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0243 CDS 252353 252706 + hypothetical protein YP_001185749.1 146305284 5106210 PFAM: protein of unknown function UPF0153 Cytoplasmic[Class 3] ATGAGCTGCACCGACCGCAAGATCGACCACCTGCGCCGGCAGATCCCACGTTTCGACTGCGTGCCGGGCTGCCACGACTGCTGTGGGCCGGTCACCGCTTCGTCCGAGGAGCTGGCGCGCCTGCCAGTCAAAAGCGATGCCGAACACGACGCGGCGCTGGCCGAGTACAACTGCGTGCATCTGGGAGCGAACGGCTGCGAGGTGTATGACCAGCGCCCGCTGATCTGCCGGCTGTTCGGTACCACGCCGAACCTGCCCTGCCCGCATGGGCGTGGGCCGGAGCAGCCGATCGAGCCGGCAGTCGAGCGTCAGGTGCATCGCCTGATCGCCACCACGCGGCAGCGGCTGGTGTAG MSCTDRKIDHLRRQIPRFDCVPGCHDCCGPVTASSEELARLPVKSDAEHDAALAEYNCVHLGANGCEVYDQRPLICRLFGTTPNLPCPHGRGPEQPIEPAVERQVHRLIATTRQRLV Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0244 CDS 252765 253253 - AsnC family transcriptional regulator YP_001185750.1 146305285 5106211 PFAM: regulatory protein, AsnC/Lrp family Cytoplasmic[Class 3] PF01037|AsnC_trans_reg, AsnC family|75|151|6e-17 COG1522|Lrp, Transcriptional regulators [Transcription]. ATGAGAACCCAGCATCAAAGCCGTCGTGAACTGGACAAGATCGACCGCAACATCCTCCGTATCCTGCAGGAGGACGGGCGCATCAGCTTTACCGAACTGGGCGAGCGCGTGGGCCTGTCCACCACGCCCTGCACCGAGCGCGTCCGCCGTCTGGAGCGCGAAGGCATCATCATGGGCTACCACGCCCGCCTCAACCCGCAGCAGCTCAAGGCCAACCTGCTGGTGTTCGTCGAGATCAGCCTGGACTACAAGTCCGGCGACACCTTCGAGGAATTCCGCCGCGCCGTACTCAAGCTGCCGCACGTGCTGGAATGCCACCTGGTGTCCGGCGACTTCGACTACCTGGTGAAGGCGCGGATCAACGAGATGGCCAGCTACCGCAAGCTGCTCGGCGACATCCTGCTCAAGCTGCCGCACGTGCGCGAGTCGAAGAGCTACATCGTCATGGAAGAGGTGAAGGAGTCGTTGGCGCTGCCGGTGCCGGATTGA MRTQHQSRRELDKIDRNILRILQEDGRISFTELGERVGLSTTPCTERVRRLEREGIIMGYHARLNPQQLKANLLVFVEISLDYKSGDTFEEFRRAVLKLPHVLECHLVSGDFDYLVKARINEMASYRKLLGDILLKLPHVRESKSYIVMEEVKESLALPVPD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0245 CDS 253411 254709 + D-amino acid dehydrogenase small subunit YP_001185751.1 146305286 5106212 PFAM: FAD dependent oxidoreductase ; catalyzes the oxidative deamination of D-amino acids Phenylalanine metabolism [KEGG] ; Nitrogen metabolism [KEGG] 1.4.99.1 Cytoplasmic Membrane[Class 3] molecular_function|GO:0016647|oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor|IEA TIGR02352|thiamin_ThiO|glycine oxidase ThiO|equivalog|1e-14|1.4.3.19|Biosynthesis of cofactors, prosthetic groups, and carriers|Thiamine PF01266|DAO, FAD dependent oxidoreductase|2|398|9e-56 COG0665|DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]. ATGCGTGTTCTGGTTCTCGGCAGTGGTGTCATCGGTACCGCCAGTGCGTACTACCTGGCCCGGCAGGGTCATGAGGTAGTGGTGGTCGATCGCCAGAACGGCCCGGCCCTGGAAACCAGCTTCGCCAATGCCGGCCAGGTGTCGCCCGGTTACGCTTCGCCCTGGGCCGCTCCGGGTGTGCCGCTGAAGGCCATCAAGTGGCTGCTGCAGAAGCATGCGCCGCTGGCGATCAAGGCCACCGGCGATGTCGATCAGTACCTGTGGATGGCGCAGATGCTGCGCAACTGCACCGCCGCCCGCTATGCGGTGAACAAGGAGCGCATGGTGCGTCTGTCCGAGTACAGCCGCGATTGCCTCGACGAGCTGCGTGCCGAAACCGGTATCGCCTATGAAGGTCGCCAGCTCGGCACCACCCAGCTGTTCCGCACCCAGGCCCAGGTCGACGCTGCCGCCAAGGACATCGCCGTGCTGGAAGCCTCCGGCGTGCCCTTCGAGCTGCTCGATCGTGACGCCATTGCTCGCGTCGAACCGGCCCTGGCCGGGGTCAAGCACAAGCTGGCCGGTGCCCTGCGCCTGCCCAACGACCAGACCGGCGACTGCCAGATGTTCACCACCAAGCTGGCGGACATGGCCAAGGCGCTCGGCGTCGAGTTCCGTTTCGGGCAGAACATCCAGCGTCTGGACGCCGTGGGCGACCGCCTCAATGGCGTGTGGATCGACGGCAAGCTGGAAACCGCCGACCGCTACGTGCTCGCTCTCGGCAGCTACAGCCCGCAGCTGCTCAAGCCGCTGGGCGTGCGCGCGCCGGTGTATCCGCTCAAGGGCTACTCGCTGACCGTGCCGATCACCAATGCCGAGATGGCGCCGACCTCGACCATCCTCGACGAGACCTACAAGGTGGCGATCACCCGTTTCGACAACCGTATCCGTGTCGGCGGCATGGCCGAGATAGCCGGTTTCGATCTGTCGCTCAACCCGCGTCGTCGCGAAACCCTGGAAATGATCACCGCCGATCTGTACCCGCAGGGCGGCGACCTGAGCCAGGCCGAGTTCTGGACCGGCCTGCGCCCGGCCACTCCGGACGGTACGCCGATCGTCGGTGCCACCGCCTACCGCAACCTGTTCCTCAACACCGGCCACGGCACCCTGGGCTGGACCATGGCCTGCGGCTCGGGCCGCCTGCTGGCCGATCTGATCGGCAGCAAGCGCCCGCAGATCAGCGCCGAGGGCCTGGATATCTCGCGTTACTCGGGCAAGAACCGCGAACTCGAGGCCGCGCCGCAGCCGCTGCGCACCTGA MRVLVLGSGVIGTASAYYLARQGHEVVVVDRQNGPALETSFANAGQVSPGYASPWAAPGVPLKAIKWLLQKHAPLAIKATGDVDQYLWMAQMLRNCTAARYAVNKERMVRLSEYSRDCLDELRAETGIAYEGRQLGTTQLFRTQAQVDAAAKDIAVLEASGVPFELLDRDAIARVEPALAGVKHKLAGALRLPNDQTGDCQMFTTKLADMAKALGVEFRFGQNIQRLDAVGDRLNGVWIDGKLETADRYVLALGSYSPQLLKPLGVRAPVYPLKGYSLTVPITNAEMAPTSTILDETYKVAITRFDNRIRVGGMAEIAGFDLSLNPRRRETLEMITADLYPQGGDLSQAEFWTGLRPATPDGTPIVGATAYRNLFLNTGHGTLGWTMACGSGRLLADLIGSKRPQISAEGLDISRYSGKNRELEAAPQPLRT Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0246 CDS 254747 255097 + Endoribonuclease L-PSP YP_001185752.1 146305287 5106213 PFAM: Endoribonuclease L-PSP Cytoplasmic[Class 3] biological_process|GO:0006402|mRNA catabolic process|IEA ; molecular_function|GO:0004521|endoribonuclease activity|IEA TIGR00004|TIGR00004|endoribonuclease L-PSP, putative|hypoth_equivalog|2.9e-12||Transcription|Degradation of RNA PF01042|Ribonuc_L-PSP, Endoribonuclease L-PSP|2|116|8e-24 COG0251|TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis]. ATGTCGATCCAGCGCCTGCATGTGGAAAAGCGCTACAGCGAAGTGGTAATCCACAACGGCACCGTCTACCTCGCCGGCCAGCTCGCCGACGACTACAGCGGCGACATCCGCCAGCAGACCCGCGAGACCCTGGCCAATATCGATCGCATGCTGGCCGAGGCCGGCAGCGACAAGAGCAAGATTCTTTCCGTGACCATCTACCTCAAGGACATGGACGCTCATTACGACGGCCTCAACGCCGAGTACGACGCCTGGGTCGCCGAGGGTGCCGCGCCGGCACGTGCCTGCGTCGAGGCGAAGATGTACAAGCCCGAGGTGCTGGTGGAAATGATGGTGGTGGCTGCCCTGTAA MSIQRLHVEKRYSEVVIHNGTVYLAGQLADDYSGDIRQQTRETLANIDRMLAEAGSDKSKILSVTIYLKDMDAHYDGLNAEYDAWVAEGAAPARACVEAKMYKPEVLVEMMVVAAL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0247 CDS 255241 256329 + dadX alanine racemase YP_001185753.1 146305288 5106214 TIGRFAM: alanine racemasePFAM: alanine racemase domain protein ; catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA D-Alanine metabolism [KEGG] ; Metabolic pathways [KEGG] 5.1.1.1 Cytoplasmic[Class 3] biological_process|GO:0009252|peptidoglycan biosynthetic process|IEA ; molecular_function|GO:0008784|alanine racemase activity|IEA TIGR00492|alr|alanine racemase|equivalog|2.6e-145|5.1.1.1|Cell envelope|Biosynthesis and degradation of murein sacculus and peptidoglycan PF01168|Ala_racemase_N, Alanine racemase, N-terminal domain|8|223|1e-59 ; PF00842|Ala_racemase_C, Alanine racemase, C-terminal domain|237|360|1e-51 COG0787|Alr, Alanine racemase [Cell envelope biogenesis, outer membrane]. ATGCGCCCCGCCCGTGCCCTGATCGACCTCGACGCGCTGCGTCACAACTACCAACTGGCCCGCGAACTGAGCGGCGCCCGCGCCCTGGCCGTGGTCAAGGCCGATGCCTACGGTCATGGCGCGGTACGCTGCGCCCAGGCTCTGCAGAGTGAGGCCGACGGCTTCGCCGTGGCCTGCATCGAAGAGGCCTTGGCCCTGCGCGAGGCCGGCATCCGTGCGCCGATCCTGCTGCTCGAAGGCTTCTTCGAGGCGGACGAGCTGGCGCTGATCGACCAGCACGAACTCTGGTGCGTGGTGCATGCGCAGTGGCAGATCGAGGCCATCGAGCAGGCACGCCTGAGCAGGCCGCTGACCCTCTGGCTCAAGCTGGATTCCGGCATGCACCGCGTCGGCCTGCACCCGGCCGAGTACCAGGAGGCCTATCGCCGTCTGCTGGCCAGCGGCAAGGTCGGCAAGATCGTGCTGATGAGCCACTTTGCCCGGGCCGACGAGCCCGAGTGCGAGCGCACCGTCGAGCAGCTGGCGGTATTCCAGCAGGCCCGCCAGGGCCTGGCCGCCGAGGTCAGCCTGTGCAACTCGCCGGCCGTGCTCGGCTGGCCACAGCTATTTGAAAAGACGGGGGCGAGCGACTGGGTGCGCCCCGGCATCATGCTGTATGGCGCCACCCCCTTCGAGCAGGCCCAGGAGCAGGCGGCGCGCCTGCAGCCGGTGATGACCCTGGAGTCCAAGGTCATCAGCGTGCGCGAACTGCCGGCCGGCGAGCCGGTGGGCTATGGTGCGCGCTTCGTCAGCGAGCGGCCGACCCGCGTCGGCGTGGTCGCCATTGGCTATGCCGACGGCTACCCGCGTCACGCCCCGACCGGCACGCCAGTGGCGGTGGATGGCCAGCTCACCCGGCTGATCGGTCGGGTATCGATGGACATGCTCACCGTGGATCTGACCGACCTGCCGCAGGCCGGCCTGGGCAGCCGTGTGGAGCTCTGGGGCAAGCAGGTGCTGGCCAGCGACGTGGCGATGGCTGCGGGCAGCATTCCCTACCAGATCTTCTGCAACCTGCGCCGGGCTCCGCTGCTCTATCTTGGGGGCTGA MRPARALIDLDALRHNYQLARELSGARALAVVKADAYGHGAVRCAQALQSEADGFAVACIEEALALREAGIRAPILLLEGFFEADELALIDQHELWCVVHAQWQIEAIEQARLSRPLTLWLKLDSGMHRVGLHPAEYQEAYRRLLASGKVGKIVLMSHFARADEPECERTVEQLAVFQQARQGLAAEVSLCNSPAVLGWPQLFEKTGASDWVRPGIMLYGATPFEQAQEQAARLQPVMTLESKVISVRELPAGEPVGYGARFVSERPTRVGVVAIGYADGYPRHAPTGTPVAVDGQLTRLIGRVSMDMLTVDLTDLPQAGLGSRVELWGKQVLASDVAMAAGSIPYQIFCNLRRAPLLYLGG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0248 CDS 256433 256981 + XRE family transcriptional regulator YP_001185754.1 146305289 5106215 PFAM: helix-turn-helix domain protein ; PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein Cytoplasmic[Class 3] PF01381|HTH_3, Helix-turn-helix|7|61|2e-10 ; PF07883|Cupin_2, Cupin domain|108|175|8e-17 COG1396|HipB, Predicted transcriptional regulators [Transcription]. TTGGACGTCGGCGTTCGACTGCAATCGATCCGTAAGCTCAAAGGCCTTTCCCAGCGTGAACTCGCCAAGCGGGCGGGCGTCACCAACAGCACCATCTCGATGATCGAGAAGAACAGCGTAAGCCCCTCGATCAGTTCGCTGAAGAAGGTGCTCGGCGGCATTCCCATGTCGCTGGTGGAGTTCTTCTCCCTCGATCTGGAGCAGGAGAACCAGACCCAGGTGGTCTACCGGGCCTCCGAACTCACCGATATCTGCAGTGGCGCCATCACCATGAAGCTGATCGGCAAGGCGCATCCGAGCCGTGCCATCGCCTTCCTTGACGAGACCTATCCGGCTGGTGCCGATACCGGCGACGAGATGTATGCCCATGAGGGCGAAGAGGCGGGCATGCTGGTCGAAGGCAAGCTGGAGCTGACCGTCGGCAGCGAGGTGTTCGTGCTCGAGCCGGGCGACAGCTACTACTTCGAGAGCAGCAAGCCGCATCGCTTTCGCAACCCGTTCGACGAGCCGGCACGCTTGATCAGTGCCACCACGCCAGCGAACTTCTGA MDVGVRLQSIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLKKVLGGIPMSLVEFFSLDLEQENQTQVVYRASELTDICSGAITMKLIGKAHPSRAIAFLDETYPAGADTGDEMYAHEGEEAGMLVEGKLELTVGSEVFVLEPGDSYYFESSKPHRFRNPFDEPARLISATTPANF Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0249 CDS 257104 257514 + Cytochrome c5-like protein YP_001185755.1 146305290 5106216 Unknown[Class 3] COG3245|CycB, Cytochrome c5 [Energy production and conversion]. ATGAAGAAAATGCTGGCAGTACCGGCTGCCGTATTGGCCCTGTGGGCAGTGACTGCTCAGGCCACGACCGATGAAGCCATCGCCGAGCGCCTCAAGCCGGTGGGCGAAGTGTGCATCATGGGTGAAGAATGCAAGGGCGTCGGCGCCGTTGCCGTGGCCGCTGGCGGCGCACGCAGCACCGACGACATCATCGCCAAGCACTGCAACGCCTGCCATGCCGCCGGCGTGCTGGGCGCGCCGAAGATCGGCGACACCGCTGCCTGGAAAGAGCGTGCCGACCATCAGGGTGGCCTCGACGGCATCCTCGCCGCTGCCATCTCCGGCATCAACGCCATGCCGCCGAAAGGCACCTGCGCCGATTGCTCGGAAGACGAACTGCGCGACGCGATCAAGAAGATGTCCGGTCTGTAA MKKMLAVPAAVLALWAVTAQATTDEAIAERLKPVGEVCIMGEECKGVGAVAVAAGGARSTDDIIAKHCNACHAAGVLGAPKIGDTAAWKERADHQGGLDGILAAAISGINAMPPKGTCADCSEDELRDAIKKMSGL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0250 CDS 257927 260062 + Acetyl-CoA hydrolase-like protein YP_001185756.1 146305291 5106217 Cytoplasmic[Class 3] COG0427|ACH1, Acetyl-CoA hydrolase [Energy production and conversion]. ATGCCGCACAGCTGTACCCTCGAACAAGCCGTCGATCATGTGCTCAGCGAGCTGGATGGGCCGATCCATCTCGGTCTGCCGCTTGGCCTGGGCAAGCCCAATCGCTGGGTCAATGCCCTGTACGCGCGGGTGCGCGAGATGCCCGAGCGGCACCTGACGATCTACACCGCGCTGTGCCTGGGGCGGCCGCGGGCCGGGCAGGAGCTGCAGCGGCGTCTGCTCGACCCCTTCGTCGCGCGGGTCTACGGCGACTATCCCGAGCTGGACTTTCTCGCCGACCTGCACGCCGGCAGCCTGCCGGCCAACGTGCGCGTGGAGCAGTTCTTCTTCCAGCCCGGCAGTCTGCTCGACTGCGAGCCGGCGCAGCAGGACTACATCAGCAGCAATTACAGCCACGTCGCCCGCGACCTCAATGCCAAGGGTCTGAACCTGGTGGCCCAGCTGGTGGCTGCCGATGACCAGCGGCCGGAGCATTTCAGCCTGAGCTGCAACCCGGACGTGACCCTGGACCTGCTGCCGTTGCTGCAGCGGCGCCGCGCCGCTGGCGAGAAGGTGCTCAGCGTCGCCCAGATTCACCACGACCTGCCCTATATGGCGGGCGACGCCCAGCTGCCGCGCGACACCTTCGACATCCACATCGTCGAGGACGAGCGGACCACGCTGTTCTCCACGCCGAACATGCCGGTGACGACCCAGGATCATTGCATCGGCCTGTTCGCCAGTACCCTGGTGCGCGACGGCGGCACGCTGCAGATCGGCATCGGTGCGATGGGCGACGCCCTGGCGGCGGCGCTGATCGCCAGGCAAGCCGACAATGCCCGCTATCGTGCGGTGCTGCAGGCGTTGCGCGGCGGCGAGGGCTGGGCCGGGGAAATCGCCGCCAACGGTGGCCTGGCGCCGCTCGAACAGGGGCTGTACGGCTGCAGCGAGATGTTCGTCAACGGTTTGCTGGCATTGGCCGAGGCCGGCCTGCTGCGGCGTGCGGTCTATCCGGACCTGCGTCTGCAACGCCTGGCCCTGGCGGGCGCGCTGGATGCCTCTGGGCGCCCGCACAGCGTGCAGGCCCTGGTCGATGCCGGGTTGCCGGCGAGGCTGCAGCCTGGCGATCTTGGCTGGCTGCGTGACAGCGGGTTGCTGCAGGGCGACCTGCAACTGGAGGAAGGCTGGCTGTATCTGCCGGATGGCAGCCGAACCGTGGCGGATCTGACCGATCCGCAGACCCAGGCCTGTCTGGCGCCCTACCTGGGCGCGGCGCAGGGCGGCGTGGTGCTGCACGGCGGCTTCTTTCTCGGCCCTGGGGCCTTCTATAGCCGCCTGCGCGAATTGGATGACGCCGCGCGACAGCGCTTCGCCATGACCGGCATCCGCTACATCAACGAGCTGTACGGCCAGGAAGAACTCAAGCGCCTGCAGCGCCGCGACGCGCGCTTCATCAATACGGTCTTCACCATGACCCTGCTCGGTGCAGGCGTCGCCGACCAGCTGGAAGACGGCCGGGTGCTCAGCGGCGTGGGTGGTCAGTACAACTTCGTCGCCCAGGCCCATGCGCTGGAGGGTGCGCGCTCCATCCTGCTGCTGCGCAGCTGGCGCGAGTCCGGCGGCCAGGTCAGTTCCAACATCGTCTGGGACTATGGCCACGCCACCATTCCACGGCACCTGCGCGACATGGTGGTGACCGAATACGGCATCGCCGATCTGCGCGGCAAGACCGATGCCCAGGTGATCGAGGCGCTGCTCGCCATCAGCGACTCGCGCTTCCAGCCCGAGCTGATCGCCCAGGCCCAGCAGGCGGGCAAGCTGGCGGCCGATTTCCGCCTGGATGCGCGCTTCAGCAACAACCTGCCGGAGCGGCTGGACAAGGTGCGTGGGGACTTTCCCGCGCTGTTTCCCGAGTACCCGCTGGGCAGCGATTTCAGCAGCGTGGAGGCCGATCTGGTGCGCGCGTTGGGCTGGCTCAAGAGCAAGCTGCACCTGAGCGAGGCGCTCGAGCTGGGCAAGGCCACGCTCGATGCGCCTGAGCCGCTCGCCTATGCCGAACATCTGCGGCGCATGGGCCTGGAGGCGCCGGACGGCGTGCGCGAAACCCTCTACCAGCGGCTGTTGCTGGCGGGCCTGCAGGCCACCGCCTCGGCGTAG MPHSCTLEQAVDHVLSELDGPIHLGLPLGLGKPNRWVNALYARVREMPERHLTIYTALCLGRPRAGQELQRRLLDPFVARVYGDYPELDFLADLHAGSLPANVRVEQFFFQPGSLLDCEPAQQDYISSNYSHVARDLNAKGLNLVAQLVAADDQRPEHFSLSCNPDVTLDLLPLLQRRRAAGEKVLSVAQIHHDLPYMAGDAQLPRDTFDIHIVEDERTTLFSTPNMPVTTQDHCIGLFASTLVRDGGTLQIGIGAMGDALAAALIARQADNARYRAVLQALRGGEGWAGEIAANGGLAPLEQGLYGCSEMFVNGLLALAEAGLLRRAVYPDLRLQRLALAGALDASGRPHSVQALVDAGLPARLQPGDLGWLRDSGLLQGDLQLEEGWLYLPDGSRTVADLTDPQTQACLAPYLGAAQGGVVLHGGFFLGPGAFYSRLRELDDAARQRFAMTGIRYINELYGQEELKRLQRRDARFINTVFTMTLLGAGVADQLEDGRVLSGVGGQYNFVAQAHALEGARSILLLRSWRESGGQVSSNIVWDYGHATIPRHLRDMVVTEYGIADLRGKTDAQVIEALLAISDSRFQPELIAQAQQAGKLAADFRLDARFSNNLPERLDKVRGDFPALFPEYPLGSDFSSVEADLVRALGWLKSKLHLSEALELGKATLDAPEPLAYAEHLRRMGLEAPDGVRETLYQRLLLAGLQATASA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0251 CDS 260123 260695 - xanthine phosphoribosyltransferase YP_001185757.1 146305292 5106218 TIGRFAM: xanthine phosphoribosyltransferasePFAM: phosphoribosyltransferase ; Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine Purine metabolism [KEGG] ; Metabolic pathways [KEGG] 2.4.2.22 Cytoplasmic[Class 3] biological_process|GO:0046110|xanthine metabolic process|IEA ; molecular_function|GO:0000310|xanthine phosphoribosyltransferase activity|IEA TIGR01744|XPRTase|xanthine phosphoribosyltransferase|equivalog|1.3e-113|2.4.2.22|Purines, pyrimidines, nucleosides, and nucleotides|Salvage of nucleosides and nucleotides PF00156|Pribosyltran, Phosphoribosyl transferase domain|30|154|6e-10 COG0503|Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]. ATGGAATCCTTGAAACAGAAGATACTCAGCGAAGGCATCGTCCTTTCCGATCAGGTGCTGAAGGTCGATGCCTTCCTCAACCACCAGATCGATCCGGCGCTGATGCAGCAGATCGGTCACGAATTCGCCCAGCGCTTCGCCGGCCAGGGCATCACCAAGATCGTCACCATCGAGGCCTCCGGCATCGCCCCGGCGGTGATGGCCGGCCTCGAGCTGGGCATCCCGGTGATCTTCGCGCGCAAGTTCCAGTCGCTGACGCTCAAGGACGACCTGCTGATCTCCAAGGTGTTCTCCTTCACCAAACAGACCGAAAGCACCATCGCCATTTCCGCCCGTCACCTGACCGCTGCCGACAAGGTGCTGGTGATCGACGACTTCCTCGCCAACGGTCACGCCGCCAAGGCGCTGATCGACCTGATCCAGCAGGCCGGCGCCCAGGTGGCCGGCATCGGCATCGTCATCGAGAAATCCTTCCAGGAAGGCCGCAACCTGCTGGAGAGCGAAGGCTACCGCGTCGAGTCGCTGGCCCGGGTCGCGGCGCTGGAAAACGGCCAGGTACGTTTTCTCGACTGA MESLKQKILSEGIVLSDQVLKVDAFLNHQIDPALMQQIGHEFAQRFAGQGITKIVTIEASGIAPAVMAGLELGIPVIFARKFQSLTLKDDLLISKVFSFTKQTESTIAISARHLTAADKVLVIDDFLANGHAAKALIDLIQQAGAQVAGIGIVIEKSFQEGRNLLESEGYRVESLARVAALENGQVRFLD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0252 CDS 260830 261312 - hypothetical protein YP_001185758.1 146305293 5106219 Cytoplasmic[Class 3] PF03682|UPF0158, Uncharacterised protein family (UPF0158)|1|137|2e-08 ATGCGCACATTCACGCTCGACCTCGACGCCCTGACTCGACTGATCAACGGTCGCGAACAACAGGAGAACTGGCTGGATCTGGATAGCGGCAAGGTCCTGACCCTGCCTGCGGAAGACCAGTACAGCGAGGAGCGCCAGCAAGTGGAGCTCGAACCGGATCGCTATACGCGCATACCCAATCTCGACGTCATGCAGCGCGTGGCCATGCGCGAGTCCTTCCTGTTCACCCTCGACGATCTGCACGCCCATCCCCTGCTCAGTGCCGCGCTGACCGGCCGCAAGCCGCTGCGCTCGTTCGACTACGAGATCGAGGCCTTTCCAGCGCTGCGCGAGCAGTGGCTGGCCTTCGAGCTCAAGCAACTGCGCGAGTTCGCCCTCAACTGGCTCTATGAACTGGGTCTGGAACCCGCGCCAGACAAGCTGCCATTGGATACGCGAGGCATTCCCAAGGACATCCTGCGGCGCCTGACCAAGAGCGCCTGA MRTFTLDLDALTRLINGREQQENWLDLDSGKVLTLPAEDQYSEERQQVELEPDRYTRIPNLDVMQRVAMRESFLFTLDDLHAHPLLSAALTGRKPLRSFDYEIEAFPALREQWLAFELKQLREFALNWLYELGLEPAPDKLPLDTRGIPKDILRRLTKSA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0253 CDS 261491 263500 - ATP-dependent DNA helicase Rep YP_001185759.1 146305294 5106220 TIGRFAM: ATP-dependent DNA helicase RepPFAM: UvrD/REP helicase ; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase 3.6.1.- Cytoplasmic[Class 3] biological_process|GO:0006310|DNA recombination|IEA ; molecular_function|GO:0004003|ATP-dependent DNA helicase activity|IEA TIGR01074|rep|ATP-dependent DNA helicase Rep|equivalog|0|3.6.1.-|DNA metabolism|DNA replication, recombination, and repair PF00580|UvrD-helicase, UvrD/REP helicase|4|485|1e-150 COG0210|UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]. ATGTCCCGACTGAATCCCCGGCAACAAGAGGCCGTGAACTACGTCGGCGGCCCACTTCTGGTGCTCGCCGGTGCAGGCTCCGGCAAGACCAGCGTGATCACCCGCAAGATCGCCCACCTGGTGCAGAACTGCGGCATCCAGGCGCGACACATCGTCGCCATGACCTTCACCAACAAGGCTGCGCGCGAGATGAAGGAGCGCGTCGGCACCCTGCTGCGCGGCAGCGAAGCGCGCGGGCTGACCGTGTCCACCTTCCACAACCTGGGCATGAACATCATCCGCAAGGAGTACGCGCGCCTGGGCTACAAGCCCGGTTTCTCGATCTTCGACGACGGCGACATCAAGGCGCTGCTCACCGACATCATGCAGAAGGAATACGCCGGCGACGACGGGGCCGACGAGGTGAAGAACCTCATCGACAGCTGGAAGAACGACCTGATCCTGCCCGACGAGGCGCTGGCCAAGGCGCGCGGGCCCAAGGAGCAGACCGCGGCCATCGTCTACCTGCACTACCAGCGCACGCTCAAGGCGTACAACGCGGTGGACTTCAACGACCTGATCCTGCTGCCGGTCAAGCTCTTCCAGGAGCACCCCGACATCCTCGAGAAGTGGCAGAACCGCATCCGCTACCTGCTGGTGGACGAATACCAGGACACCAACGCCAGCCAGTACCTGCTGGTGAAGATGCTGGTGGGCATGCGCAACCAGTTCACCGTGGTCGGCGACGACGACCAGTCGATCTACGCCTGGCGCGGCGCGCGCCCGGAAAACCTGATGCTGCTCAAAGAGGACTATCCGTCGCTGAAGGTGGTGATGCTGGAGCAGAACTACCGCTCCACCAGCCGCATCCTCAAGTGCGCCAACATCCTCATCGCCAACAACCCCCACGTGTTCGAGAAGCAGCTGTGGTCGGAGATGGGCCATGGCGACGAGATTCGCGTGATCCGCACGCGCAACGAGGAGGCCGAGTGCGAGCGGGTGGCGCTGGAAATCCTCACCGAGCACCTGCGCACCCAGCGCCCCTACAGCGACTTCGCCATCCTCTACCGCGGCAACTACCAGGCCAAGCTGATGGAGCTGAAGCTGCAGCACCACCAGATTCCCTATCGTCTCTCCGGCGGCACCAGCTTCTTCGCCCGCCAGGAGGTGAAGGACCTGATGAGCTACTTCCGCCTGCTGGTCAACCCGGACGACGACAACGCCTTCCTGCGCGTGATCAACGTGCCGCGCCGCGAGATCGGCTCGACCACCCTGGAAAAGCTCGGCAACTACGCCAGCGAGCGCAAGATCAGCATGTACGCGGCGGCCGGCGAGATCGGCCTCGGCGAACACCTCGACGCCCGCTTCACCGAGCGCCTGCAGCGCTTCACCCGCTGGATGGACCGCGTGCGCCAGGAGTGCGCGCAGAACGATCCGATCGCCGCCATCCGCAGCATGGTCATGGACATCGACTACGAGAACTGGCTGCGGCAGAACGCCTCCAGCGACAAGGTGGCCGACGCGCGCATGGGCAACGTCTGGTTCCTCGTGGACGCGCTGAAGAACACCCTGGAGCGCGACGAAGACGGCGACATGACCATCGAGGACGCCATCGGCAAACTGGTGCTGCGCGACATGCTCGAGCGCCAGCAGGAGGAGGAAGAAGGCGCCGAGGGCGTGCAGATGATGACCATGCACGCCTCCAAGGGCCTGGAGTTCCCCTCGGTATACATCATCGGCTTCGAGGAGGAGATCCTCCCGCACCGTTCCAGCATCGAGGCCGACACCATCGAGGAAGAGCGGCGCCTGGCCTATGTCGGCATCACCCGCGCCAAACGCAACCTGACCCTGACCTTCGCCGCCAAGCGCAAGCAGTACGGCGAGGTGATCGACTGCTCACCGAGCCGTTTCCTCGACGAGCTGCCGCCGGAGGATCTGGTGTGGGAAGGCCTGGAAGAGGCGCCGGTGGAGGTCAAGGCGGCGCGCGGCAACGATGCCCTGGCCAATATGCGGGCGATGCTCAAGCGCTGA MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAHLVQNCGIQARHIVAMTFTNKAAREMKERVGTLLRGSEARGLTVSTFHNLGMNIIRKEYARLGYKPGFSIFDDGDIKALLTDIMQKEYAGDDGADEVKNLIDSWKNDLILPDEALAKARGPKEQTAAIVYLHYQRTLKAYNAVDFNDLILLPVKLFQEHPDILEKWQNRIRYLLVDEYQDTNASQYLLVKMLVGMRNQFTVVGDDDQSIYAWRGARPENLMLLKEDYPSLKVVMLEQNYRSTSRILKCANILIANNPHVFEKQLWSEMGHGDEIRVIRTRNEEAECERVALEILTEHLRTQRPYSDFAILYRGNYQAKLMELKLQHHQIPYRLSGGTSFFARQEVKDLMSYFRLLVNPDDDNAFLRVINVPRREIGSTTLEKLGNYASERKISMYAAAGEIGLGEHLDARFTERLQRFTRWMDRVRQECAQNDPIAAIRSMVMDIDYENWLRQNASSDKVADARMGNVWFLVDALKNTLERDEDGDMTIEDAIGKLVLRDMLERQQEEEEGAEGVQMMTMHASKGLEFPSVYIIGFEEEILPHRSSIEADTIEEERRLAYVGITRAKRNLTLTFAAKRKQYGEVIDCSPSRFLDELPPEDLVWEGLEEAPVEVKAARGNDALANMRAMLKR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0254 CDS 263771 265444 + diguanylate cyclase/phosphodiesterase YP_001185760.1 146305295 5106221 TIGRFAM: diguanylate cyclasePFAM: GGDEF domain containing protein ; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein Cytoplasmic Membrane[Class 3] biological_process|GO:0009966|regulation of signal transduction|IEA ; molecular_function|GO:0009975|cyclase activity|IEA TIGR00254|GGDEF|diguanylate cyclase (GGDEF) domain|domain|3.7e-19||Regulatory functions | Signal transduction|Small molecule interactions | Other PF00990|GGDEF, GGDEF domain|124|274|2e-25 ; PF00563|EAL, EAL domain|297|533|4e-57 COG5001|COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]. TTGTCCACGCTCGTCGAACCCTTGCGGTTAGTCCTGCTGGCGGATACGTCCGATTGGGCCGAATTGTTGCGCGAGCAACTCAGCGCCCTGGGCAGCCCATCTCCGCTGATCACGGCGCCGTCCTGGGCGGCTGCCAGCACGCTGTTCGACGACCACGCCAGCGGCTTGTTGCTGACCACCGCCGATCGCCTTCCCGACCCCCATCAATGCCCCCTGCCCATCGTCCTGCTGCTCGACGAGGAACCCGTCGAAGAGCCCAGCGGCGTCAGCGACTGGCTGGTGCGCGGCAGCCTCAACCTCGACGTGCTGCGCCGCTGCCTGCGCTACGTGCGCGAGCAGGGCAATCTGCGCCAGACCCTGCAGCGCCTGGCCGAGCAGGACCCGCTGACCGGCATCGCCAACCGTCAGGGTTTCCAGACCCTGCTCGCCGCGCGCCTGGCCGAATGCAACGGTCGCGGCCTGGTGCTCGGCCATCTCGATCTGGACAACTTCCGCCACGCCAACGACGCCCTCGGCTATCAGGCCGGTGATCGCCTGATCCTGCAGGTGGTGGCGCGCCTGAAGAGCCTGCTGCAGCCCTGCGATCAGATCGCCCGCCTGGGCAGCGACGAATTCGCCCTGCTGCTCGATGTGCGCCGCGATCCGCTGCGGGTCGAGAGCCTGGCCGAGCGCATCACCGAGGTGCTGGCCGAGCCCTACTGGGTCGATGGCGAGAGCCTGCTGATCGGTTGCAGCCTGGGCCTGGCCCATGCCCGTGCGGGCGAGGGGGCCGATCCCTTGCTGTGGCACGCACACATCGCCATGCAGCAGGCCAAGAGTCAGCAGGGCTGCGTGTTCCATGTCTACGACGAGCGCCTCAACCGCAGTGCGCGCAGCCAGGCCGATCTGGAAGGCGAGCTGCGCCGCGCCCTGCGCCGTGACGAACTGGAACTGCATTATCAGCCGCGCCTGTGCCTGCAGAGCGGGCGCATCGTCGGCCTGGAGGCGCTGGTGCGCTGGCAGCACGGCGAGCGAGGCCTGCTCTCGCCCAACGAATTCGTGCCGCTGGCCGAGGAAACCGGGCTGATCGTGCCGCTCGGCTACTGGGTCATCTCCCGCGCCCTGCGCGACATGCAGTGGCTGCGCGGGCGCGGCCTGCCGGCCCTGCACATGGCGATCAACCTGTCGTTCCGCCAGTTCCAGGACAGCCAGCTGCTGCCGACCCTCAGCCGCCTGATCGAGGAGCGCGGGGTGGATGCGCAATGGCTGGAGTTCGAACTGACCGAGACCGCGGTGATGCGGCGCAGCGATCAGGTGCAGCAGACCATGCTGGCCCTGGGGCGGCTCGGCGTGCGTTTCTCGCTGGACGACTTCGGCACCGGCTTCTCTTCCTTCGTCCATCTCAACAGCCTGCCCATCACCCTGCTGAAGATCGACCGCAGTTTCGTCGGCGGCATGGGCGCGCGTGCCGAGAATCGCCAGCTGGTGCGGGCGATGATCAACCTGGCGCACAACCTCAATCTGGAAGTGGTGGCCGAAGGGGTGGAAAACATCGAGCAACTGGACATGCTGCGCCAGTTCGGTTGCGATCAGGTCCAGGGCTACCTGATCAGCAAGGCCGTACCGCTGGCCGAGCTGGCGCGTTTCCTGGTGTTCGGTCAGCGCCAGCCGCTGCTGGCGGTAACGCCGTCCTGA MSTLVEPLRLVLLADTSDWAELLREQLSALGSPSPLITAPSWAAASTLFDDHASGLLLTTADRLPDPHQCPLPIVLLLDEEPVEEPSGVSDWLVRGSLNLDVLRRCLRYVREQGNLRQTLQRLAEQDPLTGIANRQGFQTLLAARLAECNGRGLVLGHLDLDNFRHANDALGYQAGDRLILQVVARLKSLLQPCDQIARLGSDEFALLLDVRRDPLRVESLAERITEVLAEPYWVDGESLLIGCSLGLAHARAGEGADPLLWHAHIAMQQAKSQQGCVFHVYDERLNRSARSQADLEGELRRALRRDELELHYQPRLCLQSGRIVGLEALVRWQHGERGLLSPNEFVPLAEETGLIVPLGYWVISRALRDMQWLRGRGLPALHMAINLSFRQFQDSQLLPTLSRLIEERGVDAQWLEFELTETAVMRRSDQVQQTMLALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMGARAENRQLVRAMINLAHNLNLEVVAEGVENIEQLDMLRQFGCDQVQGYLISKAVPLAELARFLVFGQRQPLLAVTPS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0255 CDS 265479 266864 - multidrug efflux protein NorA YP_001185761.1 146305296 5106222 TIGRFAM: MATE efflux family proteinPFAM: multi antimicrobial extrusion protein MatE ; functions as a Na(+)/drug antiporter Cytoplasmic Membrane[Class 3] biological_process|GO:0006855|multidrug transport|IEA ; biological_process|GO:0042493|response to drug|IEA ; cellular_component|GO:0016020|membrane|IEA ; molecular_function|GO:0015559|multidrug efflux pump activity|IEA TIGR00797|matE|MATE efflux family protein|subfamily|5.9e-70||Transport and binding proteins|Other PF01554|MatE, MatE|248|410|5e-17 COG0534|NorM, Na+-driven multidrug efflux pump [Defense mechanisms]. ATGAAGAATTCTCTTGGTCATGAGCTGGGCGCGCTGCTGCGCCTGGCCGGCCCGCTGATCTCCGCCCAGCTGGCCCACGCGCTGATGATCTTCACCGATACGCTGATGATGGCGATGCTCGGCCCCAAGCAGCTGGCTGGCGGCGCGCTGGGCGCCACCTGCTACTTCATCTTCTCGATCTTCTGCACCGGGGTGATCGCCGCCGTGGGCAGCCTGGTCGCCATCCGCCATGGCGCCGGCGATCCGCAAGGGGTCACCCGCCTGCTGCAGAACGGCCTGTGGCTGGCGCTGCTGCTGGGCATGGTCAGCGCGCTGTGCCTCAATGGCCTGGGCCCGCTGCTGCCGCATCTGGGCCAGGCGCCCGATGCCGCGGGTCTGGCCATGGAGTTCCTGCGCCCGCTGTCGCTGGCCCTGCCCGGCTACCTGTGCTTCATGGCCCTGCGCGGTTTCACCAGCGCCATCGGCCATCCCGGCCCGGTGATGGCCATCAGCATCGCCGGCACGGCGGCCAACTTTGTCATCAACTATGCACTGATCAAGGGCTGGTTCGGCCTGCCCAGCCTGGGCCTGGGCGGCATCGGCATGACCACGGCGCTGGTCAGCACCGGCATGGCCCTGGCCTTGGCGCTGTACATCCTGCGTGCGCCGCACTACCGCCTGTACGGCTTGCGCAGCGGCCTGGGCCGCCCGCAGCGCGCGCAGATGCGCTCATTGCTGCGCCTGGGCCTGCCCATCGGCGGCACCTACGCCGCCGAGCAGGGCCTGTTCACCTTCGCCACCCTGTGCATGGGCGCTTTGGGCAGCGTACAGCTGGCGGCGCATCAGATCGCCATGCAGACCGTGGCACTGGCCTTCATCGTGCCGCAGGGGCTGTCCTATGCCGTGACCTTCCGCGTCGGCCTGCACTACGGTGCCGGGCGTCTGCCGCTGTCGCGCCTCAGCGGTCATCTGGGCATGGGCCTGGGTGCGGCGCTGATGCTGCTGTTCGCCCTGCTGTTCTGGCTGCTGCCGGAATGGATCATCGGTTTGTTTCTCGACCGTCACGATCCGGCCTTTGCCGAGATCGTGACCCTGGCGGTCAGCCTGCTGGCGATCGCCGCCTGGTTCGAGCTGTTCGATGGCCTGCAGAGCATCGCCATGGGCGCCATTCGCGGGCTGAACGACGGCCGCACGACCCTGGTGATCGGCCTGGCCGGCTACTGGTGCGTGGGCGCGCCGCTGGCCTGGCTGCTGGCCTTCGCCCTCGGCTGGGGCGCACAGGGCGTCTGGTGGGGGCTGGCGGCCGGCCTGGCGGTGACCGCGAGCGGCCTGGTGCTGGGCTTCCAGTGGAAGACGGCACGCCTGCAGCGGCAGGACAGGGTCGACGGCGAAGTTTGCCTGTCCTGA MKNSLGHELGALLRLAGPLISAQLAHALMIFTDTLMMAMLGPKQLAGGALGATCYFIFSIFCTGVIAAVGSLVAIRHGAGDPQGVTRLLQNGLWLALLLGMVSALCLNGLGPLLPHLGQAPDAAGLAMEFLRPLSLALPGYLCFMALRGFTSAIGHPGPVMAISIAGTAANFVINYALIKGWFGLPSLGLGGIGMTTALVSTGMALALALYILRAPHYRLYGLRSGLGRPQRAQMRSLLRLGLPIGGTYAAEQGLFTFATLCMGALGSVQLAAHQIAMQTVALAFIVPQGLSYAVTFRVGLHYGAGRLPLSRLSGHLGMGLGAALMLLFALLFWLLPEWIIGLFLDRHDPAFAEIVTLAVSLLAIAAWFELFDGLQSIAMGAIRGLNDGRTTLVIGLAGYWCVGAPLAWLLAFALGWGAQGVWWGLAAGLAVTASGLVLGFQWKTARLQRQDRVDGEVCLS Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0256 CDS 266995 267921 + LysR family transcriptional regulator YP_001185762.1 146305297 5106223 PFAM: regulatory protein, LysR ; PFAM: regulatory protein, LysR; LysR, substrate-binding Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|3.9e-32||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|11|67|1e-16 ; PF03466|LysR_substrate, LysR substrate binding domain|96|298|2e-14 COG0583|LysR, Transcriptional regulator [Transcription]. ATGGGTGCCATGAATCGTCGCCTGCCACCGCTGTATGCGCTGCGCGCCTTCGAGGCCGCAGCCCGCCACGCGTCCTTCACCCGGGCCGCCGAAGAGCTGGCCATCACCCAGAGTGCGGTGAGCCGGCATATCCGCACGCTGGAGGACTACTTCGGCTGCCGCCTGTTCGAGCGACGTGGCCGCGTTCTGCAACTGACCGATCCGGCGCGCGCGCTGCTGCCGGGGCTGAGCGAGGGCTTCGATGCCCTGGAGCGTGCCAGTGCGGCGCTGCGCGCCGATGATCAGGTGCTGCGTCTGAAGGCGCCCTCGACCCTGACCATGCGTTGGCTGCTGGCGCGCCTGTCGCACTTTCGCCTGGCCAACCCCGACAGCGAGGTGCAGCTGACCAGCGCCTGGATGGATGTCGACAAGGTGGACTTTCGCCACGAGCCCTTCGACTGCGCGGTGCTGCTGTCCGATGGCCAGTTTCCGGATGAATGGGAAAGCGTGCTGCTGTTCGAGGAATGGCTGACCCCGGTGTGCGCGGCCGCGGATACCGAAGCCGGCCCCTGGTCGTTGGCGCGTCTGCAGGCGGCTGAGCAACTGCACCCGACCCCGGATCGCCGCGACTGGCGGCGCTGGTTGCAGGTCACCGGCCTGGGCGAGCGCATACCGCTGAAGACCGGTCAGCTGTTCGACATGCTCGAGCTGGGCATAGTCGCGGCGGCGCGCGGCTATGGCGTGTCCATCGGCGATCTGCTGATGGTGGCGGAGGACGTCAATGCCGGCCGGCTCGGCCTGCCCTGGCGCCAGGCGGTGTTCAGCGGGGCCAGCTACTACCTGGTATGGCCCAGGACGCACCGCGCCCAGGCGCGCCTGCAGCGACTGCGCGACTACCTGCTGGCGGAGGTGGCGGCGATGCGTTTGCCGGAGGTGGAGCGGCTGTAA MGAMNRRLPPLYALRAFEAAARHASFTRAAEELAITQSAVSRHIRTLEDYFGCRLFERRGRVLQLTDPARALLPGLSEGFDALERASAALRADDQVLRLKAPSTLTMRWLLARLSHFRLANPDSEVQLTSAWMDVDKVDFRHEPFDCAVLLSDGQFPDEWESVLLFEEWLTPVCAAADTEAGPWSLARLQAAEQLHPTPDRRDWRRWLQVTGLGERIPLKTGQLFDMLELGIVAAARGYGVSIGDLLMVAEDVNAGRLGLPWRQAVFSGASYYLVWPRTHRAQARLQRLRDYLLAEVAAMRLPEVERL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0257 CDS 268018 269511 - Mg chelatase, subunit ChlI YP_001185763.1 146305298 5106224 TIGRFAM: Mg chelatase, subunit ChlIPFAM: magnesium chelatase, ChlI subunit ; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase Cytoplasmic[Class 3] TIGR00368|TIGR00368|Mg chelatase homolog|hypoth_equivalog|1.9e-253||Unknown function|General PF05362|Lon_C, Lon protease (S16) C-terminal proteolytic domain|20|167|7e-05 ; PF01078|Mg_chelatase, Magnesium chelatase, subunit ChlI|190|391|1e-103 COG0606|COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]. ATGTCCCTGGCCATCGTTCACAGCCGCGCCCAGGTCGGGGTCGAAGCCCCGGCCGTTACCGTCGAAGCGCACCTGGCCAACGGCCTGCCGGCACTGACGCTGGTCGGCCTGCCGGAAACCGCGGTCAAGGAAAGCAAGGACCGCGTGCGCAGCGCCATCCTCAACGCCGCCTTCGAATTCCCCAATCGACGCATCACCCTCAACCTGGCCCCGGCGGATCTGCCGAAGGACGGCGGTCGCTTCGATCTGGCGATCGCCCTGGGGATTCTTGCCGCCAGCGGCCAGGTGCCGGCAGCCAGCCTCGATGAATACGAATGCCTGGGCGAACTGGCACTGTCCGGCGCCGTGCGTCCGGTACAGGGCGTACTGCCGGCTGCACTGGCCACACGCGCGGCCGGCCGCACTCTCTTGGTGCCGGCGGCCAATGCCGAGGAAGCCAGCCTGGCCTCGGGCCTGAAGGTGATCGCCGTCGATCACCTGCTGCAGATCGCCGCGCACCTCAACGGCAGCGCTCCGCTCGCGCCCTATCAGGCGCAGGGGCTGCTACGCCAGAGCCTGCCATACCCGGACCTCGCGGAAGTCCAGGGCCAGCTGGCGGCCAAGCGTGCCCTGCTGGTCGCCGCAGCCGGCTCGCACAACCTGCTGCTCAGCGGCCCGCCCGGCACCGGCAAGACGCTGCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGCCGCTGGACGAAAGCGAGGCACTGCAGGTCGCCGCGATCCATTCGGTGGCCAGCCATACGCCGCTGCAGCACTGGCCACAGCGCCCCTTTCGCACACCGCACCATAGCGCCTCGGGGCCGGCCCTGGTCGGCGGCGGCAGTCGCCCGCAGCCCGGCGAAATCACCCTGGCGCATCAGGGCGTGCTGTTTCTGGACGAGCTTCCGGAATTCGACAGAAAGGTTCTTGAGGTGCTGCGCGAACCCTTGGAGAGCGGCCATATCGTCATCGCCCGGGCCCGCGACAAGGTACGCTTTCCCGCGCGCTTTCAACTGGTGGCGGCGATGAACCCCTGCCCCTGCGGCTACCTGGGCGATGCGAGCAACCGCTGCCGCTGCACCCCGGAGCAGATCCAGCGCTACCGCGCCAAGCTGTCCGGACCGCTGCTCGACCGCATCGACCTGCACCTGACCGTGGCTCGCGAAAGCACGGCGCTGGAGGTGCCGGCGCAGGATGGCGAAAGCACCGCAGAGGCGGCGGCCAAGGTGGCGCGGGCGCGCGAGTTGCAGTTGCAGCGCCAGGGCGTGGCCAACGCCTTTCTCGACCTGCCGGGGCTGCGCCAGCACTGCGCCCTGAGCGAGACGGATCGTCACTGGCTGGAAAATGCCTGCGAACGCCTCGGCCTGTCGCTGCGCGCCGCGCACCGGGTGCTCAAGGTGGCGCGCACCCTGGCCGACCTGGCCGACGAGCGGCAGATCGCACGTGCGCATCTGGCCGAGGCGCTGCAGTACCGACCGGGGATGGGTTGA MSLAIVHSRAQVGVEAPAVTVEAHLANGLPALTLVGLPETAVKESKDRVRSAILNAAFEFPNRRITLNLAPADLPKDGGRFDLAIALGILAASGQVPAASLDEYECLGELALSGAVRPVQGVLPAALATRAAGRTLLVPAANAEEASLASGLKVIAVDHLLQIAAHLNGSAPLAPYQAQGLLRQSLPYPDLAEVQGQLAAKRALLVAAAGSHNLLLSGPPGTGKTLLASRLPGLLPPLDESEALQVAAIHSVASHTPLQHWPQRPFRTPHHSASGPALVGGGSRPQPGEITLAHQGVLFLDELPEFDRKVLEVLREPLESGHIVIARARDKVRFPARFQLVAAMNPCPCGYLGDASNRCRCTPEQIQRYRAKLSGPLLDRIDLHLTVARESTALEVPAQDGESTAEAAAKVARARELQLQRQGVANAFLDLPGLRQHCALSETDRHWLENACERLGLSLRAAHRVLKVARTLADLADERQIARAHLAEALQYRPGMG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0258 CDS 269546 269893 - hypothetical protein YP_001185764.1 146305299 5106225 PFAM: protein of unknown function DUF526 Unknown[Class 3] PF04380|DUF526, Protein of unknown function (DUF526)|38|108|6e-19 COG2960|COG2960, Uncharacterized protein conserved in bacteria [Function unknown]. ATGCTCAAAAATTGTGCAGCTCGCCCCGGAACGTCTCATGTACAGCTGCGTGCTACACTGCCGGCCGTCTGTACTCGGAACCCGACCATGCTGCCGCCCAAAGCCCTGCTCGACACCCTCAGTAGCCACGCCTCGCGTCTGTTCAGCGGCGACAGCCCGCTGCCGCGCGCCGAACTGGAGGCTCAGTTCAAAGCGCTGCTGCAAAGCGGCTTCAGCAAGCTGGAGCTGGTCAGCCGTGAAGAATTCGACAGCCAGATGGTGGTCCTGGCCCGCACTCGCGCCCGCCTCGAAGCGCTGGAAGCCAAGGTTGCCGAACTGGAAGCCAAGCTGAACCCACCCACCGACTGA MLKNCAARPGTSHVQLRATLPAVCTRNPTMLPPKALLDTLSSHASRLFSGDSPLPRAELEAQFKALLQSGFSKLELVSREEFDSQMVVLARTRARLEALEAKVAELEAKLNPPTD Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0259 CDS 270217 270555 + nitrogen regulatory protein P-II YP_001185765.1 146305300 5106226 PFAM: nitrogen regulatory protein P-II Cytoplasmic Membrane[Class 3] PF00543|P-II, Nitrogen regulatory protein P-II|4|105|2e-42 COG0347|GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]. ATGAAGCTAGTCACTGCCATCATCAAGCCGTTCAAGCTGGACGACGTGCGCGAGTCGCTGTCGGAGATCGGCGTGCAGGGCATTACCGTCACCGAGGTCAAGGGCTTCGGCCGCCAGAAAGGCCACACCGAGCTGTATCGCGGCGCCGAGTACGTGGTCGACTTCCTGCCCAAGGTGAAGATCGACGTGGCCATCGCTGACGACCAGCTGGATCGCGTGATCGAGGCCATCACCAAGGCGGCCAACACCGGCAAGATCGGTGACGGCAAGATCTTCGTGGTCAACCTGGAACAGGCGATTCGCATCCGTACCGGCGAAACCGATACCGACGCGATCTAA MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0260 CDS 270885 272135 + ammonium transporter YP_001185766.1 146305301 5106227 TIGRFAM: ammonium transporterPFAM: Rh family protein/ammonium transporter ; TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter Cytoplasmic Membrane[Class 3] TIGR03644|marine_trans_1|probable ammonium transporter, marine subtype|hypoth_equivalog|0||No Data|No Data PF00909|Ammonium_transp, Ammonium Transporter Family|18|410|2e-81 COG0004|AmtB, Ammonia permease [Inorganic ion transport and metabolism]. ATGGATAACACAGCATTGACTGCATTGCAGTACGGCTTCGATACCTTCTACTTTCTGATCTGTGGTGCCCTGGTGATGTGGATGGCGGCGGGTTTTGCCATGCTCGAATCCGGCCTGGTGCGCGCCAAGAACACCACCGAGATCCTGACCAAGAACGTCGCGCTGTACGCCGTGGCCAGCGTCATGTACTTGGTGATCGGCTACCACATCATGTATTCCAGCCCGGAAGGCGGCATCCTGCCGAGCCTGGGCTTCCTGATCGGTGACGAGAACACGGCCGAGGCCGTTCTGGCCGGTGGTGACGACGCCCCCTACTACTCGACCCGTTCGGACTTCTTCTTCCAGGTGGTATTCGCCGCGACCTGCATGTCGATCGTTTCCGGCGCCGTTGCCGAGCGCATGAAGCTGTGGGCCTTCCTCGCCTTCGCCGTGGTCATGACCGGCTTCATCTACCCGGTTCAGGGCTTCTGGAAATGGGGTTCGGGCTTCCTCAACGAAGCCGGCTTCCTCGACTTCGCCGGTTCCGGCGTGGTGCACATGGCCGGTGCTTCCGCTGCGCTGGCCGGTGTCCTGCTGCTCGGTGCACGCAAGGGCAAGTACGGCTCGAACGGTCAGGTCAACGCCATTCCTGGCTGCAACCTGCCACTGGCGACCCTGGGTACCTTCATCCTGTGGATGGGCTGGTTCGGCTTCAACGGCGGCTCGCAGCTGAAGATGAGCACCATCGAGGATGCCAACGCCGTGGCTCAGGTGTTCGTCAACACCAACATGGCCGCCGCCGGTGGCCTGATCGCCGCACTGATCGTGGCACGCATCCTGTTCGGCAAGGCCGACCTGACCATGGCCCTCAACGGTGCCCTGGCCGGCCTGGTGGCCATCACCGCTGAACCGCTGACCCCGAGCGCCCTGCAGGCCACCCTGATCGGCGGCGTCGGTGGCGCGCTGGTGGTGTTCTCCATCCTCGGTCTGGACAAGGTCAAGATCGACGATCCGGTCGGCGCCATCTCCGTACACGGCGTGGTCGGCGTCTGGGGTCTGCTGGCGGTCTGCCTGACCAACAGCGACGCCACGCTGGGCGCTCAGCTGCTGGGCATCGCCAGCATCTTCGCCTGGGTCTTCGTCGCCAGCCTGATCGTCTGGAGCATCATCAAGGCGGTGATCGGCCTGCGCGTCAGCGAAGAGGAAGAATACGAAGGTGTGGATATCGCCGAGTGCGGTATGGAGGCCTACCCGGAATTCACCAACAAGTGA MDNTALTALQYGFDTFYFLICGALVMWMAAGFAMLESGLVRAKNTTEILTKNVALYAVASVMYLVIGYHIMYSSPEGGILPSLGFLIGDENTAEAVLAGGDDAPYYSTRSDFFFQVVFAATCMSIVSGAVAERMKLWAFLAFAVVMTGFIYPVQGFWKWGSGFLNEAGFLDFAGSGVVHMAGASAALAGVLLLGARKGKYGSNGQVNAIPGCNLPLATLGTFILWMGWFGFNGGSQLKMSTIEDANAVAQVFVNTNMAAAGGLIAALIVARILFGKADLTMALNGALAGLVAITAEPLTPSALQATLIGGVGGALVVFSILGLDKVKIDDPVGAISVHGVVGVWGLLAVCLTNSDATLGAQLLGIASIFAWVFVASLIVWSIIKAVIGLRVSEEEEYEGVDIAECGMEAYPEFTNK Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0261 CDS 272234 272659 + hypothetical protein YP_001185767.1 146305302 5106228 PFAM: protein of unknown function UPF0047 Unknown[Class 3] TIGR00149|TIGR00149|conserved hypothetical protein TIGR00149|hypoth_equivalog|1.7e-44||Hypothetical proteins|Conserved PF01894|UPF0047, Uncharacterised protein family UPF0047|19|136|2e-34 COG0432|COG0432, Uncharacterized conserved protein [Function unknown]. ATGTGGCAGCAACGCATTATCAGTCTGCGTCCGCGTGAGCGAGGTTTCCATCTGGTGACCGAGGAAGTGCTGGAATTATTGCCGGAACTGTCGCAAGTGCGTGTCGGTCTGTTGCATCTGTGGCTGCAGCACACCTCGGCGTCCTTGAGCGTCAACGAGAATGCCGACCCTGCGGTGCGTCGCGATTTCGAACGCTTCTTCAACCGCCTGGTACCGCAGGGTGAGGCGGGCTACGAACACGATTACGAAGGGCCGGACGATCTGCCCGCGCACTTCAAGAGCAGTCTGCTGGGCTGTGCGCTGCAGCTGCCGATACAGGATGGACGCTTGGCGTTGGGCACCTGGCAGGGCATCTACCTGGGCGAGCACCGCGATCATGGCGGTAGTCGGCGAGTGGTGGCGACCCTGTACGGGGAGGCTATTTGA MWQQRIISLRPRERGFHLVTEEVLELLPELSQVRVGLLHLWLQHTSASLSVNENADPAVRRDFERFFNRLVPQGEAGYEHDYEGPDDLPAHFKSSLLGCALQLPIQDGRLALGTWQGIYLGEHRDHGGSRRVVATLYGEAI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0262 CDS 272737 273060 + hypothetical protein YP_001185768.1 146305303 5106229 Cytoplasmic[Class 3] ATGAGCGACGAAGACCTGGAACAAGACGATCTGGAAGGGGCTGACGAGGACGACGGTGAGGAGCTGGCTGCCGCCGACGACGGTGACAGTGGCGACGACGACGGCGATGGCGAGATCGTAGCCAGCGGCAAGAAGAGCAAGGCCAAGGCCGTCGAAGTCGACGAGATGCCCAGCATCGAGGCCAAGCAGAAGGAGCGCGATGCCCTGGCTCGAGCGATGGAGGAGTTCCTCGCCCGTGGCGGCAAGGTGCAGGAGGTGGAGCCCAACGTGGTCGCCGACCCACCCAAGAAGCCCGACAGCAAATACGGCAGCCGCCCCATCTGA MSDEDLEQDDLEGADEDDGEELAAADDGDSGDDDGDGEIVASGKKSKAKAVEVDEMPSIEAKQKERDALARAMEEFLARGGKVQEVEPNVVADPPKKPDSKYGSRPI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0263 CDS 273185 273886 - HAD family hydrolase YP_001185769.1 146305304 5106230 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3 ; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase Cytoplasmic[Class 3] TIGR02253|CTE7|HAD superfamily (subfamily IA) hydrolase, TIGR02253|subfamily|3.7e-14||No Data|No Data PF00702|Hydrolase, haloacid dehalogenase-like hydrolase|5|202|7e-17 COG1011|COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]. ATGAGCATTGAACTGATCACCTTCGACCTCGACGACACCCTGTGGGACGTCACGCCGGTGATGCAGGACGCCGAGGCGGCCCTGCGCAACTGGCTGGCCCTGCATGCGCCGCGCCTGGGCGCGGTGCCGGTCGAGCATCTGTGGACGGTACGCAGCCGCCTGCTCAACGCGGAGCCCATGCTCAAGCACCGCCTGAGCGAGCTGCGCCGGCGCATTCTGTTTCACGCCCTGGAAGAGGCGGGTTATCCGCACGGCGAGGCGCAGGCACTGGCCGAAGCCGGCTTTCAGGTGTTTCTCAACGCCCGCCATCAGGTCGAGCTATTCGCCGAAGTGCACCCGACGCTGGAAGCCCTGGCCGAGCGCTTCATGCTCGGGGTGATCACCAATGGCAATGCCGATGTGCGCCGTCTGGGGCTGTCGGAGTATTTCCGCTTCGCCCTGTGCGCCGAAGAGCTGGGCATCGGCAAACCCGATCCGAAGCCCTTCCGCGAAGCCCTCAGCCGCGCAGGCGGCGTGGCCGCCGAACGCGCCGTGCATATCGGCGATCACCCCAGTGACGATATCGCCGGTGCCCAGGCGGCCGGCATGCGGGCGATCTGGTTCAACCCGCAAGGGCGCAGCTGGGAAGGCGAAACCACGCCGGATGCGCAGATCGCCAGCCTGGCCGAGCTGCCGGCGCTGCTGGGCAGCTGGACACGCTGA MSIELITFDLDDTLWDVTPVMQDAEAALRNWLALHAPRLGAVPVEHLWTVRSRLLNAEPMLKHRLSELRRRILFHALEEAGYPHGEAQALAEAGFQVFLNARHQVELFAEVHPTLEALAERFMLGVITNGNADVRRLGLSEYFRFALCAEELGIGKPDPKPFREALSRAGGVAAERAVHIGDHPSDDIAGAQAAGMRAIWFNPQGRSWEGETTPDAQIASLAELPALLGSWTR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0264 CDS 273883 274830 - xerC site-specific tyrosine recombinase XerC YP_001185770.1 146305305 5106231 TIGRFAM: tyrosine recombinase XerCPFAM: phage integrase family protein ; site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs Cytoplasmic[Class 3] biological_process|GO:0006310|DNA recombination|IEA ; molecular_function|GO:0009009|site-specific recombinase activity|IEA TIGR02224|recomb_XerC|tyrosine recombinase XerC|equivalog|6.8e-156||DNA metabolism|DNA replication, recombination, and repair PF02899|Phage_integr_N, Phage integrase, N-terminal SAM-like domain|22|105|1e-17 ; PF00589|Phage_integrase, Phage integrase family|140|298|1e-32 COG4973|XerC, Site-specific recombinase XerC [DNA replication, recombination, and repair]. ATGGCGCACAGCTCATCCACCATCGGTCCGTTCGGAACCCGGCACGTGACATTTGAAGCCCATCTCGACGCCTACCTTGAACACCTGCGCCGCGAGCGCCAGGTGTCGGTGCATACCCTCGACGGCTACCGCCGTGATCTCGGCAAGCTGCTGGCCTTCTGCGAAGCGGAAGGCCTGAGCGACTGGGCCGCGCTGGATACCCGCAGCCTGCGCCGCCTGATCGCCCGCCTGCATGCTCAGGGCCTGGCCAGCCGCAGCCTCGCACGCCTGCTCTCGGCCACCCGCGGCCTGTACCAATACCTGCTGCGCGAGGGCCTGTGCCGCCACGATCCGGCCGCCGGCCTGAGCCCGCCGAAACGCGAACGCCGCCTGCCGCGCACGCTGGACGCCGACCGCAGTGCGCAGCTGCTCGACGGCGCGGTGGAGGACGACTTCATCGCCCGCCGCGATCAGGCCATGCTCGAGCTGTTCTATTCCTCCGGCCTGCGCCTGTCGGAGCTGGTCGGCCTCGATGTCGATGGTCTCGACCTGCCGGCCGGCCTGGTGCGCGTGCGCGGCAAGGGCAACAAGACGCGCGAGCTGCCGGTCGGCAGCATGGCGCGCCAGGCCCTGGAGCAGTGGCTGCCGCTGCGCAAGCTGGCAGGCCCCAGCGATGGCGCCGTGTTCATCAGCCAGCAGGGACGCCGCCTGGGGCCGCGCGCGGTGCAGCTGCGCGTGCGCCAGGCCGGCGTACGCGAGCTGGGCCAGCACCTGCATCCGCACATGCTGCGCCACAGCTTCGCCAGTCATATGCTGGAATCCTCGCAGGACCTGCGCGCGGTGCAGGAGCTGCTCGGCCACGCCGACATCGCCACCACGCAGATCTACACCCACCTGGACTTCCAGCACCTGGCCACTGTCTATGACCAGGCCCATCCGCGCGCCAAGCGCAAAGGCGGTTCCGAATGA MAHSSSTIGPFGTRHVTFEAHLDAYLEHLRRERQVSVHTLDGYRRDLGKLLAFCEAEGLSDWAALDTRSLRRLIARLHAQGLASRSLARLLSATRGLYQYLLREGLCRHDPAAGLSPPKRERRLPRTLDADRSAQLLDGAVEDDFIARRDQAMLELFYSSGLRLSELVGLDVDGLDLPAGLVRVRGKGNKTRELPVGSMARQALEQWLPLRKLAGPSDGAVFISQQGRRLGPRAVQLRVRQAGVRELGQHLHPHMLRHSFASHMLESSQDLRAVQELLGHADIATTQIYTHLDFQHLATVYDQAHPRAKRKGGSE Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0265 CDS 274845 275543 - hypothetical protein YP_001185771.1 146305306 5106232 PFAM: protein of unknown function DUF484 Cytoplasmic[Class 3] PF04340|DUF484, Protein of unknown function, DUF484|11|225|8e-65 COG3159|COG3159, Uncharacterized protein conserved in bacteria [Function unknown]. ATGACCGACCAGCAGGATTCGCCCAAACCGCTCGATTCGGAAACCGTCGCGGCCTACCTGCGCCTGCATCCGGAGTTCTTCATCGACCATGAGGAGCTGATTCCGGAACTGCGTATTCCGCACCAGCCCGGCAATGCCGTGTCGCTGGTCGAACGCCAGGTCAAGCTGCTGCGCGAGCGCAACATCGAGATGCGCCACCGCCTCGGCCAGCTGATGGACGTGGCCCGCGACAACGACCGTCTGTTCGACAAGACCCGTCGCCTGGTCCTCGACCTGCTCGATGCCGGCAGCCTGGAAGAGGTGGTCGGCGCAGTGGAGGACAGCCTGCGTCGCGAGTTTCAGGTGCCTTTCGTCGGCCTGATCCTGTTCAGCGACAGCAAGCTGCCGGTGGGCCGCTCGGTCAGTTCGGCCGAAGCCCACCAGCAGATCGGCGGCCTGCTCAGCGGCGGCAAGACCATCTGCGGCGTGCTGCGTCCGCACGAGCTGGAATTCCTCTTCGGCAAGGACGAGGCCGCCCAGGTCGGCTCCGCTGCCGTGGTCAGCCTCAGTCACCAGGGCCTGCATGGCGTGCTGGCCATCGGCAGCGCCGACCCACAGCATTACAAGAGCTCGCTGGGCACCCTGTTCCTCGGCTATATCGCCGAAGTGCTGGCGCGCGTGGTGCCGAGTTTTTCCACACCGCTGCGCTCGGTACGCTAG MTDQQDSPKPLDSETVAAYLRLHPEFFIDHEELIPELRIPHQPGNAVSLVERQVKLLRERNIEMRHRLGQLMDVARDNDRLFDKTRRLVLDLLDAGSLEEVVGAVEDSLRREFQVPFVGLILFSDSKLPVGRSVSSAEAHQQIGGLLSGGKTICGVLRPHELEFLFGKDEAAQVGSAAVVSLSHQGLHGVLAIGSADPQHYKSSLGTLFLGYIAEVLARVVPSFSTPLRSVR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0266 CDS 275540 276370 - dapF Diaminopimelate epimerase YP_001185772.1 146305307 5106233 PFAM: diaminopimelate epimerase ; involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate Lysine biosynthesis [KEGG] ; Metabolic pathways [KEGG] 5.1.1.7 Cytoplasmic[Class 3] biological_process|GO:0009089|lysine biosynthetic process via diaminopimelate|IEA ; molecular_function|GO:0008837|diaminopimelate epimerase activity|IEA TIGR00652|DapF|diaminopimelate epimerase|equivalog|5e-131|5.1.1.7|Amino acid biosynthesis|Aspartate family PF01678|DAP_epimerase, Diaminopimelate epimerase|5|125|1e-35 ; PF02567|PhzC-PhzF, Phenazine biosynthesis-like protein|50|272|4e-06 COG0253|DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]. ATGCTATTGCGCTTTACCAAGATGCACGGCCTGGGCAATGACTTCATGGTCCTCGACCTGATCAGTCAGCATGCCCACGTGCAACCCAAACATGCCAAGCAGTGGGGCGACCGTCACACCGGCGTCGGCTTCGATCAGTTGCTGATCGTCGAACCGCCGAGCCACCCGGACGTCGACTTCCGCTACCGCATCTTCAACTCCGACGGCTCCGAGGTGGAGCAGTGCGGCAACGGCGCGCGCTGCTTCGCCCGCTTCGTGCTGGACAAGCGCCTGACCACCAAGAAGACCATTCGCGTCGAGACCAAGAGCGGCGTGATCGAACTGCGCGTGCAGAACGACGGCCAGGTCTGCGTCAACATGGGCGCACCGCGTCTGGAGCCGGCGCAGGTGCCGTTCCAGGCCGAGCAGGCGGCGCTGACCTATCGCGTCGACGTCGAAGGTCAGAGCGTCGAGCTGGCTGCGCTGTCGATGGGCAACCCGCATGCCGTGCTGCGCGTCGACAACGTCGACAGCGCCCCGGTGCACACCCTCGGACCGAAGCTGGAACATCACCCGCGCTTTCCGCAGCGGGTCAACGTCGGCTTCCTGCAGGTGCTGGACCGCAAGCATGCGCGCCTGCGCGTGTGGGAGCGCGGCGCCGGCGAAACCCAGGCCTGCGGCACCGGCGCCTGCGCCGCCGCGGTCGCGGCGATTCGCCAGGGCTGGATGGATTCGCCCGTGCAACTGGAACTGCCAGGCGGCAAACTGTCCATCGAATGGGCAGGCGAAGGTCAGCCGGTTATGATGACCGGGCCCGCTGCCCGCGTATACGAAGGACAGGTTCGCCTATGA MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHTGVGFDQLLIVEPPSHPDVDFRYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKTIRVETKSGVIELRVQNDGQVCVNMGAPRLEPAQVPFQAEQAALTYRVDVEGQSVELAALSMGNPHAVLRVDNVDSAPVHTLGPKLEHHPRFPQRVNVGFLQVLDRKHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPVQLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0267 CDS 276381 277628 - diaminopimelate decarboxylase YP_001185773.1 146305308 5106234 TIGRFAM: diaminopimelate decarboxylasePFAM: Orn/DAP/Arg decarboxylase 2 ; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 Lysine biosynthesis [KEGG] ; Metabolic pathways [KEGG] 4.1.1.20 Cytoplasmic[Class 3] biological_process|GO:0009089|lysine biosynthetic process via diaminopimelate|IEA ; molecular_function|GO:0008836|diaminopimelate decarboxylase activity|IEA TIGR01048|lysA|diaminopimelate decarboxylase|equivalog|4.9e-233|4.1.1.20|Amino acid biosynthesis|Aspartate family PF00278|Orn_DAP_Arg_deC, Pyridoxal-dependent decarboxylase, C-terminal sheet domain|284|389|2e-27 ; PF01168|Ala_racemase_N, Alanine racemase, N-terminal domain|33|234|4e-05 ; PF02784|Orn_Arg_deC_N, Pyridoxal-dependent decarboxylase, pyridoxal binding domain|33|281|3e-72 COG0019|LysA, Diaminopimelate decarboxylase [Amino acid transport and metabolism]. ATGGAAGCCTTTACCTACCGCGACGGTGAGCTGTTCGCGGAAGGTGTCGCCTTGTCCGCGCTGGCCCAGCGCTTCGGCACACCCACCTACGTCTACTCGCGCGCCCATATCGAGGCGCAGTACCGCGCCTATGCCGATGCCCTGGCGGGCATGCCGCATCTGGTCTGCTTCGCGGTCAAGGCCAACTCCAACCTTGGCGTGCTGAACGTCCTGGCCCGCCTCGGCGCCGGCTTCGACATCGTCTCCAGCGGTGAGCTGGAACGCGTGCTGGCCGCCGGTGGCGAGCCTAGCCGCATCGTCTTCTCCGGCGTCGGCAAAAGCCGCGACGACATGCGCCGCGCCCTCGAAGTGGGCGTGCACTGCTTCAACGTCGAGTCCAGCGTCGAGCTGGAGCGCCTGCAGAAGGTCGCCGCCGAACTGGGTCTGAAGGCGCCGGTGTCGCTGCGGGTCAACCCGGACGTGGACGCCGGCACCCATCCGTACATTTCCACCGGTCTCAAGGAAAACAAGTTCGGCATCGACATCGAGCAGGCCGAGGCGGTCTACGCCCGCGCCGCCGAGCTGCCGAACCTGGAGGTGGTCGGCGTCGACTGCCATATCGGCTCGCAGCTGACCACCCTCGAACCCTTCCTCGATGCCCTGGACCGCCTGCTGCTGCTGGTCGACCGGCTGGCCGCCCGCGGCATCCACATCAAGCACCTGGACCTGGGCGGCGGCCTCGGCGTGCAGTATCGCGACGAACAGCCACCGCTGGCCGGCGATTACATCGCCGCCGTGCGCAAACGCCTGGCAGGCCGCGATCTGGCCCTGGTGTTCGAACCGGGCCGCTTCATCGTGGCCAATGCCGGCGTGCTGCTGACCCAGGTGGAATACCTCAAGCACACCGAGCACAAGGACTTCGCCATCATCGATGCGGCGATGAACGACCTGATCCGCCCGGCGCTGTACCAGGCCTGGATGGACGTTTCGCCGGTGCAGCCGCGTGACGGCGAGGCGCGCCACTACGACCTGGTCGGGCCGATCTGCGAGACCGGCGACTTCCTGGCCAAGGACCGCCAGCTGGTGCTGGAAGAAGGCGACCTGCTGGCCGTGCGTTCGGCCGGCGCCTACGGTTTCGTCATGAGCTCCAACTACAACACCCGCGGCCGCGCCGCCGAGGTGCTGGTGGACGGCGAACAGGCTTATGAAGTGCGTCGCCGCGAGACCGTCCAAGAGCTCTACGCCGGCGAAAGCCTGCTGCCGGCCTGA MEAFTYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVHCFNVESSVELERLQKVAAELGLKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEAVYARAAELPNLEVVGVDCHIGSQLTTLEPFLDALDRLLLLVDRLAARGIHIKHLDLGGGLGVQYRDEQPPLAGDYIAAVRKRLAGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMDVSPVQPRDGEARHYDLVGPICETGDFLAKDRQLVLEEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESLLPA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0268 CDS 277945 278982 + AraC family transcriptional regulator YP_001185774.1 146305309 5106235 PFAM: helix-turn-helix- domain containing protein, AraC type Cytoplasmic[Class 3] PF00165|HTH_AraC, Bacterial regulatory helix-turn-helix proteins, AraC family|297|341|8e-06 COG2207|AraC, AraC-type DNA-binding domain-containing proteins [Transcription]. ATGGACAATCCCGCGACGCTGGCCGGTTCGGTCTCGGTGGCTTACCTGCAGGGCCTGGTCGATCACCTGCAGCGCCAGGGCGTAGCCCCTGCGGCGCTGCTCGCTCACGCCCAGTTGACACCGGACGTACTGACCCAGCGTGACCAGCGTATCGCCGCCAGCGCCTACCTGACGCTGCTCGGCGAAGCGGTGCGCTACAGCGCGGACGACTGTCTCGGGCTGCATCTGGGCGAGTCGGTGCGCCCTGGCTACTACGGCGTGCTCGGCTACCTGATCATGAGTTGCGCGACGCTGGCCGATGCACTGCACCGGCAGGCGCGCTATGCCTCGCTGGTGGGTAATCTGGGCCTGGTCGGGCTCGACGACGAACCGCCGCGCCCGGGGTGCGAGGCGCAGGTGGCGCACACCTGGCAACCCCTGCTGGCGCAGCAGCAGCGCCAGCTGAGCGAGGAGACGCTGGCCGGCTGGGTCAGCTTCGGGCGCTGGATCAGCGGGCTGGACATCGCGCCGACCGAGGTGCGTTTTCAGCATTCGGCGCCGGCCGATACCTCCGAGCACGCGCGCATCTTTCGCTGTCCGGTGCTGTTCGATCAGGCCGACAACGCCCTGGTGTTTCCCAAGCGTCTGCTGGCCGCGCCGCTGGGGCAGGCCGATGCCCAGGTGCGCCGCATGCTCGACGCCTATGCCGAACGCCTGCTCGCCGAGCTGAACCAGGGCCACAGCGTGCTCGACCGGGCGCGCCTGGAGCTGGCGCGACAACTGCCCGAGCAGGGACCGGATCTGGAGACGATCGCCAGCGCCCTGGCGCTAAGCCCGCGCACCCTGCAGCGGCGTCTGCGCGAGGCGGGGCTGTCGTTCAGCCAGCTGGTGGACGAAACCCGCCAGCAACTGGTGCTGCACTACCTGCGCGACCCGGCGCTGGAGCTGGCCGAAATCGCCTTTCTGGTCGGTTTCAGCGAGCCAGGTTCGCTGGTGCGGGCGTTTCGTCGCTGGACGGGAGGGAGCCCGGGCGAGTACCGTCGCCACCTTCTTGGCTAG MDNPATLAGSVSVAYLQGLVDHLQRQGVAPAALLAHAQLTPDVLTQRDQRIAASAYLTLLGEAVRYSADDCLGLHLGESVRPGYYGVLGYLIMSCATLADALHRQARYASLVGNLGLVGLDDEPPRPGCEAQVAHTWQPLLAQQQRQLSEETLAGWVSFGRWISGLDIAPTEVRFQHSAPADTSEHARIFRCPVLFDQADNALVFPKRLLAAPLGQADAQVRRMLDAYAERLLAELNQGHSVLDRARLELARQLPEQGPDLETIASALALSPRTLQRRLREAGLSFSQLVDETRQQLVLHYLRDPALELAEIAFLVGFSEPGSLVRAFRRWTGGSPGEYRRHLLG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0269 CDS 279052 279384 + cyaY frataxin-like protein YP_001185775.1 146305310 5106236 PFAM: Frataxin family protein ; defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly Unknown[Class 3] biological_process|GO:0016226|iron-sulfur cluster assembly|IEA ; molecular_function|GO:0005506|iron ion binding|IEA TIGR03421|FeS_CyaY|iron donor protein CyaY|equivalog|4.1e-47||Biosynthesis of cofactors, prosthetic groups, and carriers|Other PF01491|Frataxin_Cyay, Frataxin-like domain|3|108|7e-34 COG1965|CyaY, Protein implicated in iron transport, frataxin homolog [Inorganic ion transport and metabolism]. ATGAGCCTGAGCGAAGCCCGCTTCCACGATCTGGTCGATGCCACCCAGCAGGCGGTGGAGGACATCTTTGACGACAGCGGTCTGGACGTCGATCTGGAGAACAGCGCCGGCGTACTCACGGTGCGCTTCGACAACGGCAGCCAACTGATCTTCAGCCGCCAGGAGCCGATCCGTCAGCTGTGGCTGGCGGCGCGCTCGGGGGGCTACCACTTCGATTACGACGAGGCCGAAGGGCGCTGGATCTGCGACAGCAGCGACGAGCAGCTGGGCGAGATGCTGGTGCGCATCACGCTGGAACAGTCCGGTGCCGAGCTGGAGTTCGATGAGCTCTGA MSLSEARFHDLVDATQQAVEDIFDDSGLDVDLENSAGVLTVRFDNGSQLIFSRQEPIRQLWLAARSGGYHFDYDEAEGRWICDSSDEQLGEMLVRITLEQSGAELEFDEL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0270 CDS 279374 279571 + hypothetical protein YP_001185776.1 146305311 5110240 PFAM: protein of unknown function DUF1289 Unknown[Class 3] PF06945|DUF1289, Protein of unknown function (DUF1289)|11|61|6e-09 COG3313|COG3313, Predicted Fe-S protein [General function prediction only]. ATGAGCTCTGATTCTGCCGACAGGCCGCTGGAGTCGCCGTGCCGCCGCCAGTGTTGCCTGGACGAGCACGACCAGTGCCTGGGCTGCGGCCGCACCCTTCAGGAGATTCTCGACTGGGGCGCGGCCGACAATGCACGGCGCCGGCAGATCGCCGCGGCGGCCGAACAGCGTCTGCGTCAGCGCCGGTCGACCCCCTGA MSSDSADRPLESPCRRQCCLDEHDQCLGCGRTLQEILDWGAADNARRRQIAAAAEQRLRQRRSTP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0271 CDS 279689 280096 + nucleoside diphosphate kinase regulator YP_001185777.1 146305312 5110241 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation Cytoplasmic[Class 3] biological_process|GO:0006354|RNA elongation|IEA ; molecular_function|GO:0003711|transcription elongation regulator activity|IEA TIGR01462|greA|transcription elongation factor GreA|subfamily_domain|1.1e-06||Transcription|Transcription factors COG0782|GreA, Transcription elongation factor [Transcription]. ATGAACAATGCACCTGCCATCACCATTACCCGTCTCGATCTGCAGCGTCTGGAGCGTCTGCTCGACAGTCTGGATGAGTTCGGCCCCGGCGCGGCCGCGCTGCAGGCCGAGCTGGATCGCGCCGAAGTGGTGGGCCTCGACGAGGTGCCCGCCGGCCTGGTGACCATGAATTCGCGCGTGCACTGCCGTGAAGAGAGCAGCGGCAAGGACTATCACCTGACCCTGGTCTACCCGCAGGACGCCGGGGGCGAGGGGACGGTGAGCATTCTCGCGCCGGTGGGCAGTGCGCTGCTCGGCCTGTCGGTCGGTCAGCACATCGACTGGCCGGCACCCGGCGGCAAGCAGCTCAAGCTGACCCTGCTGGCCGTCGAGTACCAGCCGGAAGCGGCAGGCGAGTACGACCGCTGA MNNAPAITITRLDLQRLERLLDSLDEFGPGAAALQAELDRAEVVGLDEVPAGLVTMNSRVHCREESSGKDYHLTLVYPQDAGGEGTVSILAPVGSALLGLSVGQHIDWPAPGGKQLKLTLLAVEYQPEAAGEYDR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0272 CDS 280155 280955 + lipase, class 3 YP_001185778.1 146305313 5110242 PFAM: lipase, class 3 Unknown[Class 3] PF01764|Lipase_3, Lipase (class 3)|90|221|1e-27 COG3675|COG3675, Predicted lipase [Lipid metabolism]. ATGTCCAGTCTGCCCCTGTATTTCCCGCCCACCTATCAGCTAGCGCGCGCCCAGCGCTGTGCCGAGCTGGTGATACTCGCGTACGATCAGTACGCGCAGTGGCTGGCGCAGCAGCGCCCGCGCAAGCCCCAGCAGTTTCACTGGCAGCCGCCTCAGCAGGCCGGCTGGCAGCTGTCCGCACCGATCTGGAGCATCCTCAGCGAGTGGTACGTGCTCGACGAGTCGGAGCCGTTCGGCTTTGCCGCGCGCGATGCGCAGGGCGACTGCTATCTGGTGTTCCGCGGTACCGAGTCGGTGCAGGACTGGCTCGATGACCTCGATCTGGATCAGCGCGCCTACCCCTGGCAGGCCGGCGGCGGCCTGGTGCACGACGGTTTCCTCAAGCTGTATGCGTCCCTGCGCGACCAGGCGTTGCTGGCGCTGGAACAGCTGCAGCCACAGGGCATGCTCTGGGTCTGCGGCCACAGCCTGGGCTGTGCGCTGAGCAGCCTGGCGGTACCGGATCTGCGGCGGCGCTGGCCCTTTCTGGCGCTGCAGCACTACAACTTCGCCAGCCCGCGGCTGGCCTCGCCGGCGTTCGCCAACTACTACAACGCGCTGGCCGTGCCCACCTATCGGCTGGTCAACGACAGCGACCTGGTGCCGGAGCTGCCGCCGGCGGACAGCGATGGCTGGCTCTACCAGCATCTCGGCCTGGCGGTGACCTTCACCGCCAGTTACGCAGGGGTTGCCGACAATCACAGCATGGGCGGCTGTTATCTCTTCGCGCTGAACAATCCGCAGTCGCCAATGCGCGGCTAG MSSLPLYFPPTYQLARAQRCAELVILAYDQYAQWLAQQRPRKPQQFHWQPPQQAGWQLSAPIWSILSEWYVLDESEPFGFAARDAQGDCYLVFRGTESVQDWLDDLDLDQRAYPWQAGGGLVHDGFLKLYASLRDQALLALEQLQPQGMLWVCGHSLGCALSSLAVPDLRRRWPFLALQHYNFASPRLASPAFANYYNALAVPTYRLVNDSDLVPELPPADSDGWLYQHLGLAVTFTASYAGVADNHSMGGCYLFALNNPQSPMRG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0273 CDS 280970 283828 - cyaA adenylate cyclase YP_001185779.1 146305314 5110243 PFAM: adenylate cyclase, class-I ; catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP Purine metabolism [KEGG] 4.6.1.1 Cytoplasmic[Class 3] PF01295|Adenylate_cycl, Adenylate cyclase, class-I|20|783|1e-156 COG3072|CyaA, Adenylate cyclase [Nucleotide transport and metabolism]. ATGACGCGCACCCTGGAAATCCGCCCGGACATCGACGACGGCATCGACCGCAAGGTGCTGACGCAGCTGCGCGCGCGTTTTCTCAAGATCAACCAGGGTCGCCTGCAGCGCACCATGCTGGGCCTCTCCAGCCGCCAGCAGCTGGTGCTCAAGCTGTTGCCGTTGCTGCTGCACGTCAACCATCCGCTGCTGCCGGGTTACGTCTCCGCCGCCACGCCCGCCGGCCTGAGCGGTTTCGAGCCGGATGACGAGGTGCTCGCCGAGGTCCAGCGCCTGACACGCTCCTTCGTCTACAAGCCACGCCGCGGTCAGGGCAGCGCCCCGCTGCATGGTCTGTTTCTGATGGGCAGCCTGGGCACCGTGGCCCAGGCCGAGCAGAGCGACATGGACCTGTGGCTGTGCCACAGCCCCACCCTCACCGCGCAGCAGCTGCAGGAGCTGCGCAAGAAGAGCGACCTGCTGGAAAGCTGGGCAGCCACCCAGGGCGCCGAGGTGCACGTCTTTCTCGTCGATCCGCAGCGCTTCACCCAGGGCGCGCGCGAGGCGCAACTGACCTCGGACGACTGCGGCACGACCCAGCACTACCTGCTGCTCGACGAGTTCTACCGCACGGCCATCTGGCTCGGCGGCCGCACGCCGCTGTGGTGGCTGGTGCCGGTATACGAAGAACCGCGCTACCACGATTACTGCCGCACCCTGCTGAGCAAGCGCTTCGTGCGCGCCGAGGACGTGCTCGACCTGGGCCACCTGGCGCACATCCCCCCCGATGAGTTCATCGGCGCCGGCATGTGGCAGCTGTACAAGGGCATCGAGTCGCCCTACAAGTCGGTGCTCAAGCTGCTGCTCACCGAGGTGTACGCCAGCGAGCACCCCAGGGTCGAGTGCCTGTCGCTGCGCTTCAAGCAGGCGGTGTTCGAAGGCCGTCTCGACCTCGACGAGCTGGACCCGTACGTCGTGGTCTACCGACGCCTCGAAGAGTATCTGAGCGCCCGCGGCGACCTCGAGCGCCTGGAGCTGGTACGTCGCTGCCTGTATTTGAAGGTGAACAAGAAGATCAGCCGGCCGCCGACTCGCGGCCGCGCCAAGAGCTGGCAGCGCCTGCTGCTCGAGCGCCTGACCGCCGAGTGGGGCTGGAACACGCGCCAGCTCAACCTGCTCGACAGTCGCAGCCAGTGGAAGGTGCGCCAGGTCGCCGCCGAGCGTCGCGTGCTGGTCAACGAGCTGACCTACAGCTATCGCTTTCTCTCCCAGTTCGCCCGTAGCGCCCAGGCTGGCAGTTCGCTGAACAACCGCGATCTCAATGTGCTGGGTCGACGCCTGTATGCCGCCTTCGAGCGCAAGGCCGGTAAGGTCGAATTCATCAACCCGGGCATCGCCCCCGATCTGGCCGAGGACATCCTGACGCTCGTCCAGCACCCCAGCCCGGAAGCGCCCAACGATTATCAGTGGGCGCTGTTCACCGGCAGCCTGGGCGCCCAGGAGTGGCCCGATTTCGCACCGCTCAAACGCACGCGCGAACTGGTCGAGCTGCTCGCCTGGTGCCACCGCAACGGGGTCATCGACGCCGCCACCCGGCTGTCGCTGCACCCGGGCAGCAGCGATCTGACCGACTTCGAGCTGTCCAACCTGATTACCAGCCTGCAGCACAGCTTTCCCCTGCCGCAACCCGGCGTCGAGGAGGCGGCTCTTTTGCGCGCCAGCGTTCCCAGCCAGGTATTGCTGCTGGTCAACGTCGGCGTCGACCCGCTGCCGCAGCACAGCCAGATGAACGTGCACATGACCACCGGACGCACCGATGCCCTGGGCTATTCGGGCGTGCGTGAGAACCTGGTGCTGACCCTGGATCAGGTGGTGCTCAACAGCTGGAACGAATTGCAGGTCAGCCGCTACGACGGCAGCGATGCCCTGCTCGACTGCCTGTGCGATCTGCTCAACAGTCTGCCGCCAGGTGGCCCGCAGCCGGGCGTGCAGGTGCGCTGCTACTGCCGCAACCGTGCGCCCGCCATCGCCGAGCGGGTCGAGGAACTGCTGCGCGACCTGCTCGCCACCTATGCCGAAGGCCGCCAGGCGCGCTACCTGGTGCAGGTGCGCCAGCATTACCACGTGCTGCAGCTGACGCCGGGCCAGGTCAGCCATGCCGCCCTGGGCGACCTGCCGGCCCTGCTCGAACACCTGGGAGCCGAGCAGGAGCTCTACAGCCCGCTGCACCTGGATCGCCATGCACTGGAGGGCGACGATCTGGCGCTGATCCTGCCCATGGGGCGGCCGCAGTGCATCCAGCTGTTCTATCGCCAGCACGAGACCAGCGGCGAAGCCGAGCTGACCCTGCTCGACGAGAACAATGCCCTGTGGCGTCGCCGTCTGCCGTTTCGCGACGAACAGAGCCTGCTGACGCCGCTGCAACGCTTCCTGCAATCGCTGCAGTACCGACGCAACGCCATGCTGCCGCTCGACAGCAGCGACAACCAGGCACCGCTGGAAATTCTCTACTACCAGTTGCTGCCAGCCGCGCCGCTGCGCGCCCAGCGCCTGGAACGCAGGCCGGCACCGCAGGCGCAGGTCAGCCATCCGTTCTACGACGTGCAGGCCATCATCGAGCCGGGCGACGGGCGCCAGCGCCATGTCACCCTGTACTGCAACCACCGCGAGTTCTCCGAGCTGGAGTACGGGCGCGAGCTGTATCGCGCCGTGGCCCAGCACATCCTGGCCCAGCGCGCCGGCGGCGAACGCTACCCCTGCTACATCACCGACCTCGATCTCTCTGCCGTGCTCGCCGGGCAACAGGCGCAGACCGTGCACTACCTGCGCTACAAGAGCGAACTGGAAGATGCCCTCAATGCGGCGCTGCAGCAGGCCTAG MTRTLEIRPDIDDGIDRKVLTQLRARFLKINQGRLQRTMLGLSSRQQLVLKLLPLLLHVNHPLLPGYVSAATPAGLSGFEPDDEVLAEVQRLTRSFVYKPRRGQGSAPLHGLFLMGSLGTVAQAEQSDMDLWLCHSPTLTAQQLQELRKKSDLLESWAATQGAEVHVFLVDPQRFTQGAREAQLTSDDCGTTQHYLLLDEFYRTAIWLGGRTPLWWLVPVYEEPRYHDYCRTLLSKRFVRAEDVLDLGHLAHIPPDEFIGAGMWQLYKGIESPYKSVLKLLLTEVYASEHPRVECLSLRFKQAVFEGRLDLDELDPYVVVYRRLEEYLSARGDLERLELVRRCLYLKVNKKISRPPTRGRAKSWQRLLLERLTAEWGWNTRQLNLLDSRSQWKVRQVAAERRVLVNELTYSYRFLSQFARSAQAGSSLNNRDLNVLGRRLYAAFERKAGKVEFINPGIAPDLAEDILTLVQHPSPEAPNDYQWALFTGSLGAQEWPDFAPLKRTRELVELLAWCHRNGVIDAATRLSLHPGSSDLTDFELSNLITSLQHSFPLPQPGVEEAALLRASVPSQVLLLVNVGVDPLPQHSQMNVHMTTGRTDALGYSGVRENLVLTLDQVVLNSWNELQVSRYDGSDALLDCLCDLLNSLPPGGPQPGVQVRCYCRNRAPAIAERVEELLRDLLATYAEGRQARYLVQVRQHYHVLQLTPGQVSHAALGDLPALLEHLGAEQELYSPLHLDRHALEGDDLALILPMGRPQCIQLFYRQHETSGEAELTLLDENNALWRRRLPFRDEQSLLTPLQRFLQSLQYRRNAMLPLDSSDNQAPLEILYYQLLPAAPLRAQRLERRPAPQAQVSHPFYDVQAIIEPGDGRQRHVTLYCNHREFSELEYGRELYRAVAQHILAQRAGGERYPCYITDLDLSAVLAGQQAQTVHYLRYKSELEDALNAALQQA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0274 CDS 283949 284203 - hypothetical protein YP_001185780.1 146305315 5110244 Unknown[Class 3] TIGR02647|DNA|conserved hypothetical protein TIGR02647|hypoth_equivalog|3.9e-42||Hypothetical proteins|Conserved PF09653|DUF2395, Protein of unknown function (DUF2395)|3|77|3e-29 ATGAAGTCATTCACTGCCGAACTGATCGACGAGCTGGAAATCCTCGCCCTGTACAACCTGGATAACCATCAGGAAGGGTTGAAGGTGCACAACAACGCCTCGTTCAAAGCCCAGGGCGCCATCACCCGCCTGTATGAGAAGGGCCTGGTCAGCCAGGCCGACGGCGGCTACCTGACCAGCCTGGGCATCGATGCCGCCGAACATGCGCAAGCCCTGCTGACCATCCTCTCGACCCGCCAGACCACCCCCGCTTAA MKSFTAELIDELEILALYNLDNHQEGLKVHNNASFKAQGAITRLYEKGLVSQADGGYLTSLGIDAAEHAQALLTILSTRQTTPA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0275 CDS 284278 284607 - hypothetical protein YP_001185781.1 146305316 5110245 Unknown[Class 3] ATGTCGGCCTGCGCCTGTAGCGCATCAACACGGAAAACCGCCATGAGCGAACACGACGACAACGACGAAGACTTCGCCGAAGCCACGCTGATCCAGGCCATCGAGAATCAGCTGGAAAGTGGCGAACCTGCCGCCGCCAAGGCGGTGTACAACAAGCTGACGCTGGTCGGCTATGAGCGCGAGGAGATTCTCGAGCTGATGGCGCTGGTGCTGGCTCATGAGGTCGACGCCATGCTGCGTGAGGACCGTCCCTTCGATGGCGCCTGGTACGAGCAGGCCCTGCGCGCGCTGCCCGAACTGCCGCCAGAGGAGCAGAGCGACGATCAATAG MSACACSASTRKTAMSEHDDNDEDFAEATLIQAIENQLESGEPAAAKAVYNKLTLVGYEREEILELMALVLAHEVDAMLREDRPFDGAWYEQALRALPELPPEEQSDDQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0276 CDS 284588 285046 - hypothetical protein YP_001185782.1 146305317 5110246 Cytoplasmic Membrane[Class 3] ATGCGTCATGCGTTGTTTTCCGGGCTGCTGGCCCTCTCGGTTCCGATGGCCCTCGCCAGCGAAGGCGACTACTGGCAGGTGCAGACCAGCGTCTACACCCGCCACTACCACCCCGAGCCGGACCACAACAACCATCAGCGCCTGATCGGCCTGGAGCGCGGCTACGCCTCGGGCAACCTGTGGGGCGGCGCCGTCTTCCGCAATTCCTTCGACCAGAATTCGCAGTACGCCTACCTGGGGCGTCGCTTCGACAGCGAACGCCATCCCTTCTACGCCAAGCTGACCGGCGGGCTGCTGCACGGATACCGCGGCGAATACCGCGACAAGATTCCCCTCAATCGCCTCGGCGTGGCGCCGGCCATCATTCCCTCGCTCGGCGTGCACGGCCACGGCCTGGCCGCCGAACTGGTACTGCTGGGCAATGCCGCGCTGATGGTCAATGTCGGCCTGCGCCTGTAG MRHALFSGLLALSVPMALASEGDYWQVQTSVYTRHYHPEPDHNNHQRLIGLERGYASGNLWGGAVFRNSFDQNSQYAYLGRRFDSERHPFYAKLTGGLLHGYRGEYRDKIPLNRLGVAPAIIPSLGVHGHGLAAELVLLGNAALMVNVGLRL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0277 CDS 285099 286493 - argininosuccinate lyase YP_001185783.1 146305318 5110247 TIGRFAM: argininosuccinate lyasePFAM: fumarate lyase ; catalyzes the formation of arginine from (N-L-arginino)succinate Alanine, aspartate and glutamate metabolism [KEGG] ; Arginine and proline metabolism [KEGG] ; Metabolic pathways [KEGG] 4.3.2.1 Cytoplasmic[Class 3] biological_process|GO:0042450|arginine biosynthetic process via ornithine|IEA ; molecular_function|GO:0004056|argininosuccinate lyase activity|IEA TIGR00838|argH|argininosuccinate lyase|equivalog|1.3e-266|4.3.2.1|Amino acid biosynthesis|Glutamate family PF00206|Lyase_1, Lyase|12|306|1e-70 COG0165|ArgH, Argininosuccinate lyase [Amino acid transport and metabolism]. ATGAGCAGCGAAAAAACCAACCAATCCTGGGGCGGCCGCTTCAGCGAGCCCGTCGACGCCTTCGTCGCCCGCTTCACCGCCTCGGTCGAATTCGACAAGCGCCTGTATCGCCACGACATCATGGGCTCCATCGCCCACGCCAGCATGCTGGCCAAGGTCGGCGTGCTCACCGATGCCGAGCGCGACGCCATCGAAGGCGGCCTCAAGCAGATCCAGGGCGAGATCGAAGCCGGCCAGTTCGACTGGCGCGTGGACCTGGAAGACGTGCACATGAACATCGAGGCGCGCCTGACCGACCGCATCGGCGTCACCGGCAAGAAGCTGCATACCGGGCGCTCGCGTAACGACCAGGTGGCCACCGACATTCGCCTGTGGCTGCGCGACGAGATCGACGTCATCCTCGCCGAGATCACCCGCCTGCAGCAGGGCCTGCTGGGTCTGGCCGAAGCCGAAGCGGACACCATCATGCCCGGCTTCACCCATCTGCAGACCGCCCAGCCGGTGACCTTCGGCCATCACCTGCTGGCCTGGTTCGAGATGCTCTCGCGTGATTACGAGCGTCTGGTGGACTGCCGCAAGCGCACCAACCGCATGCCCCTGGGCAGCGCCGCGCTGGCCGGCACCACCTACCCGATCCAGCGCGAGATCACCGCCGAACTGCTGGGCTTCGACGCCGTGGGCGGCAACTCCCTGGACGGCGTGTCGGATCGCGACTTCGCCATCGAATTCTGCGCCGCCGCCTCGCTGGCGATGATGCACCTGTCGCGCTTCTCCGAAGAGCTGGTGCTGTGGACCAGCGCGCAGTTCCAGTTCATCGACCTGCCGGATCGCTTCTGCACCGGCAGCTCGATCATGCCGCAGAAGAAGAACCCGGACGTACCCGAGCTGGTGCGTGGCAAGACCGGTCGCGTGTTCGGCGCCCTGACCGGCCTGCTGACCCTGATGAAAGGCCAGCCGCTGGCCTACAACAAGGACAACCAGGAAGACAAGGAACCGCTGTTCGACGCCGCCGACACCCTGCGCGATAGCCTGCGCGCCTTCGCCGACATGGTCCCGGCGATCAAGCCCAAGCGCGAGATCATGCGCGAGGCAGCGCTGCGCGGCTTCTCCACCGCCACCGACCTGGCCGACTACCTGGTGCGCAAGGGCCTGCCGTTCCGCGACTGCCACGAGATCGTCGGCCATGCGGTCAAGTACGGCGTACATAGCGGCAAGGACCTGGCCGAGATGAGCCTGGACGAGCTGCGCCAATTCAGCGACCAGATCGATGACGACGTGTTCGCCGTACTGACCCTGGAAGGCTCGGTCGGCGCCCGCGACCATATCGGCGGCACCGCACCGAACCAGGTACGCGCCGCGGTGGCACGCGGCCGCGAACTTCTCTCCGCGCGCTGA MSSEKTNQSWGGRFSEPVDAFVARFTASVEFDKRLYRHDIMGSIAHASMLAKVGVLTDAERDAIEGGLKQIQGEIEAGQFDWRVDLEDVHMNIEARLTDRIGVTGKKLHTGRSRNDQVATDIRLWLRDEIDVILAEITRLQQGLLGLAEAEADTIMPGFTHLQTAQPVTFGHHLLAWFEMLSRDYERLVDCRKRTNRMPLGSAALAGTTYPIQREITAELLGFDAVGGNSLDGVSDRDFAIEFCAAASLAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGKTGRVFGALTGLLTLMKGQPLAYNKDNQEDKEPLFDAADTLRDSLRAFADMVPAIKPKREIMREAALRGFSTATDLADYLVRKGLPFRDCHEIVGHAVKYGVHSGKDLAEMSLDELRQFSDQIDDDVFAVLTLEGSVGARDHIGGTAPNQVRAAVARGRELLSAR Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0278 CDS 286726 287808 + sensory transduction protein kinase AlgZ YP_001185784.1 146305319 5110248 PFAM: histidine kinase internal region Two-component system [KEGG] 2.7.3.- Cytoplasmic Membrane[Class 3] PF06580|His_kinase, Histidine kinase|163|244|2e-24 COG2972|COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]. ATGCACACTCAATCGCTTGCCAAGAACAAACACAACGACCCTGCCGACGAGTTCTTCGTCCCGGAACTGTGCCAGCCCGAAGCGCTGCTGAGCATGGTGCTGCTGGCCGAACTGCTGGTGCTGGTGCTGGTGCTCGCCCAACCGATGACGCCGGGCTTCGACTGGGTGCGTCTGGCCCTGACCTCGTTGTTCGTGCAGTGGATCGTGCTGCTGTCGGCGGCCGTGCTGTGCCGCCTGCGCCCGCTGCTGGCGCGCCTGCGCCCGGCAATCGCCGGAGGGCTTTGCTGCGCCCTGGTGGTGCTGCTGACCCTGGGCTGCACGGCCGTGGCGGACTACTACGACCTGGGCGGACCGTTGCCGCGCAGTGGCGAGGTCAATCTCTACCTGCGTCACGCGCTGATCGGCCTGATCATGTCCGCACTGCTGCTACGCTATTTTTATCTGCAGAGCCAATGGCGCAGGCAGGAACAGGCCGAATTGCGCGCGCGCATCGAATCGCTGCAGGCGCGCATCCGCCCGCATTTCCTGTTCAACAGCCTCAACAGCATCGCCAGCCTGGTCACGCTCGATCCGCACAAGGCCGAGCAGGCGGTGCTGGATCTGTCCGATCTGTTTCGCGCCAGTCTGGCCAAGCCCGGCACGCTGGTGCCCTGGAAGGAGGAACTGGAGCTGGCGAAACGATATCTATCGATTGAGCACTATCGGCTCGGCGAGCGTCTACAGTTGCAATGGGAGGTCGAAGGTGTGCCGGAGGATCTGCCGATCCCCCAATTGACCCTCCAGCCGCTGTTGGAGAATGCGCTGATCTACGGCATCCAGCCACGCATCGAGGGTGGCCTGGTGCGAGTCGAAGCGGATTACCAAAATGGTGTGTTCAGCTTGTGTGTCAGCAATCCGTATGAAGAGCGGGGCGAGCAGCATCCGTCACGGGGAACGCAACAAGCGCTGAGCAATATAGATGCGCGTCTGGCGGCACTTTTCGGGCCGCGCGCGAGTCTCAGCGTGGAGCGCCGTGACGGCCGTCATTACAGCTGTCTACGCTATCCTTGTGCGAGACTCACGCAGGAAGCCAGAGCAATATGA MHTQSLAKNKHNDPADEFFVPELCQPEALLSMVLLAELLVLVLVLAQPMTPGFDWVRLALTSLFVQWIVLLSAAVLCRLRPLLARLRPAIAGGLCCALVVLLTLGCTAVADYYDLGGPLPRSGEVNLYLRHALIGLIMSALLLRYFYLQSQWRRQEQAELRARIESLQARIRPHFLFNSLNSIASLVTLDPHKAEQAVLDLSDLFRASLAKPGTLVPWKEELELAKRYLSIEHYRLGERLQLQWEVEGVPEDLPIPQLTLQPLLENALIYGIQPRIEGGLVRVEADYQNGVFSLCVSNPYEERGEQHPSRGTQQALSNIDARLAALFGPRASLSVERRDGRHYSCLRYPCARLTQEARAI Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0279 CDS 287805 288551 + two-component response regulator AlgR YP_001185785.1 146305320 5110249 PFAM: response regulator receiver ; PFAM: response regulator receiver; LytTr DNA-binding region Two-component system [KEGG] Cytoplasmic[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; biological_process|GO:0030436|asexual sporulation|IEA ; biological_process|GO:0042173|regulation of sporulation resulting in formation of a cellular spore|IEA ; molecular_function|GO:0000156|two-component response regulator activity|IEA TIGR02875|spore_0_A|sporulation transcription factor Spo0A|equivalog|1.3e-05||Cellular processes|Sporulation and germination PF04397|LytTR, LytTr DNA-binding domain|148|246|4e-21 ; PF00072|Response_reg, Response regulator receiver domain|3|114|2e-26 COG3279|LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]. ATGAATGTCCTGATCGTCGATGACGAACCCCTAGCCCGCGAGCGCCTGAGCCGCATGGTCGGTGAGCTCGAGGGTTACCGGGTCCTGGAGCCCGCCGCCAGCAATGGCGAGGAAGCTCTGACCCTGATCGATAGCCTCAAGCCGGATGTGGTCCTGCTGGATATCCGCATGCCCGGCCTGGATGGTCTGCAGGTCGCTGCCAGACTGTGCGAGCGCGAAGCGCCGCCAGCGGTGATCTTCTGCACGGCTCACGATGAATTCGCCCTGGAGGCTTTCCAGGTCAGCGCGGTCGGCTATCTGGTCAAGCCGGTGCGGGCGGAGAATCTCAGCGAGGCGCTGAAGAAGGCCGAGCGGCCCAACCGCGTGCAGCTGGCGGCATTGACCCGCCCGGCGGCGGAAAGTGGCGGCGGCCCGCGGACCCACATCAGCGCCCGCACGCGCAAGGGCATCGAGCTGGTCCCGCTGGATCACGTGGTCTACTTCATCGCCGATCACAAGTACGTGACGCTGCGCCACGAGGGCGGCGAAGTGCTGCTCGACGAGCCGCTCAAGGCGCTGGAGGACGAGTTCGGCGACCGCTTCGTACGCATCCACCGCAATGCGCTGGTTGCCCGTGAGCGCATCGAGCGCCTGCAGCGTACGCCGCTGGGGCATTTCCAGCTGTTCCTGAAAGGCCTGGACGGCGACTCGCTGGTGGTCAGCCGGCGCCATGTGGCCGGCGTGCGCAAGCTGATGCAGTCGCTGTAG MNVLIVDDEPLARERLSRMVGELEGYRVLEPAASNGEEALTLIDSLKPDVVLLDIRMPGLDGLQVAARLCEREAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRAENLSEALKKAERPNRVQLAALTRPAAESGGGPRTHISARTRKGIELVPLDHVVYFIADHKYVTLRHEGGEVLLDEPLKALEDEFGDRFVRIHRNALVARERIERLQRTPLGHFQLFLKGLDGDSLVVSRRHVAGVRKLMQSL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0280 CDS 288636 289574 + hemC porphobilinogen deaminase YP_001185786.1 146305321 5110250 TIGRFAM: porphobilinogen deaminasePFAM: Porphobilinogen deaminase ; transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis Porphyrin and chlorophyll metabolism [KEGG] ; Metabolic pathways [KEGG] 2.5.1.61 Cytoplasmic[Class 3] biological_process|GO:0006779|porphyrin biosynthetic process|IEA ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0004418|hydroxymethylbilane synthase activity|IEA TIGR00212|hemC|porphobilinogen deaminase|equivalog|5.6e-156|2.5.1.61|Biosynthesis of cofactors, prosthetic groups, and carriers|Heme, porphyrin, and cobalamin PF01379|Porphobil_deam, Porphobilinogen deaminase, dipyromethane cofactor binding domain|5|216|1e-101 ; PF03900|Porphobil_deamC, Porphobilinogen deaminase, C-terminal domain|224|297|1e-20 COG0181|HemC, Porphobilinogen deaminase [Coenzyme metabolism]. ATGCCCCGCGAAATCCGCATCGCCACCCGTAAGAGCGCCCTGGCCCTGTGGCAGGCCGAATATGTCAAAGCCCGCCTCGAACAGGCCCACCCCGGTCTGCTGGTGAGTCTGGTGCCCATGGTCAGCCGCGGCGACAAGCTGCTCGATGCGCCGCTGGCGAAGATCGGCGGCAAGGGCCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGAGAACGAGGCCGACATCGCCGTGCATTCGATGAAGGACGTGCCGATGGACTTCCCCGAAGGCCTGGGCCTGTACTGCATCTGCGAGCGCGAGGACCCGCGCGACGCCTTCGTTTCCAACACCTATGACAGCCTCGACGCCTTGCCGGCCGGCAGCGTGGTGGGCACCTCCAGCCTGCGTCGCCAGGCCCAGCTGCTGGCCCGCCGGCCCGATCTGAAAATCCAGTTCCTGCGCGGCAACGTCAACACCCGCCTGGCCAAGCTCGATGCCGGCGAGTACGACGCCATCATCCTTGCCGCCGCCGGCCTGATCCGCCTCGGCTTCCAGGACCGTATCCGCAGCTCGATCAGCGCCGAGGACAGCCTGCCGGCCGGTGGCCAGGGTGCCGTCGGCATCGAGTGCCGAAGCGCCGACGCCGAGATCCATGCGCTGCTGGCGCCGCTGCATCACCGCGAAACCGCGCTGCGGGTGACCGCCGAGCGCGCATTGAACAAGCGCCTCAATGGCGGCTGCCAGGTGCCCATCGCCTGCTACGCGCTGCTGGAGAACGACCAACTGTGGCTGCGCGGCCTGGTCGGCCAGCCTGACGGCGGCCTGTTGCTGCGCGCAGAACACCGCGCCGCCAGCAGCGACGCCGAAGCCCTGGGGGTGCGGGTGGCCGAGGCGCTGCTGGCGCAGGGCGCCGAGGCCATCCTCAAGGCCGTTTATGGCGAGGCCGGCCACCCGTGA MPREIRIATRKSALALWQAEYVKARLEQAHPGLLVSLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPAGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFQDRIRSSISAEDSLPAGGQGAVGIECRSADAEIHALLAPLHHRETALRVTAERALNKRLNGGCQVPIACYALLENDQLWLRGLVGQPDGGLLLRAEHRAASSDAEALGVRVAEALLAQGAEAILKAVYGEAGHP Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0281 CDS 289571 290344 + uroporphyrinogen-III synthase YP_001185787.1 146305322 5110251 PFAM: Uroporphyrinogen III synthase HEM4 ; catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane Porphyrin and chlorophyll metabolism [KEGG] ; Metabolic pathways [KEGG] 4.2.1.75 Unknown[Class 3] PF02602|HEM4, Uroporphyrinogen-III synthase HemD|32|213|5e-14 COG1587|HemD, Uroporphyrinogen-III synthase [Coenzyme metabolism]. GTGAGCGCCTGGCGCCTGCTGCTGACCCGTCCTGCAGAGGACTGTGCGGCGCTGGCGCAAACGCTGGCCGAACACGGCATCACCGGCAGCTGCATGCCCTTGCTGGGTATCGAGCCGCTGCCCGAGACGGCCGAGCAGCGCATCGCCTTCGCCGAACTGCAACGCTACTGCGCGGTCATCGTGGTCAGCAAACCTGCTGCGCGCCTCGGCCTGGCGCTGCTGGATGGTCACCGCGCCGAGCCAGTGACCGGTCAGCCCTGGTTCGCCGTCGGGGCCGCCACGGCAGCGCTGCTCACCGAGCATGGCCTGCCTGTCCACTACCCCGAGCGCGGCGACGACAGCGAAGCCCTGCTTGCGCTGCCGGCCCTGCAGGGCGCGCTGGCCGCCGAGTCCGCGCCGCGGGTGCTGATCCTGCGTGGCGAGGGTGGCCGAGAATTCCTCGGCCAATGCTTGCGCGGCCAAGGTGCGAGCGTCGACTATCTGCCACTGTATCGCCGCGTCCTGCCACCATACCCGGCGGGCGAACTGAGCCGGCGCGTGCAGGCGGAACGCCTGAACGGCCTGGTGGTCAGCAGTGGACAGGGTTTCGAGCATCTGCTGCAGCTGGCTGGCGATGACTGGCCGGCGTTGGCTCGGCTACCCTTGTTCGTACCCAGCCCGCGTGTCGCCGAACAGGCACGCGCTGCGGGTGCGCAGATCGTTGTGGACTGTCGCGGCGCCAGTGCCGCGGCCTTGCTGGCAGCCCTGGAGCAGTTTCCGGCTGCCGCCCTCTAA MSAWRLLLTRPAEDCAALAQTLAEHGITGSCMPLLGIEPLPETAEQRIAFAELQRYCAVIVVSKPAARLGLALLDGHRAEPVTGQPWFAVGAATAALLTEHGLPVHYPERGDDSEALLALPALQGALAAESAPRVLILRGEGGREFLGQCLRGQGASVDYLPLYRRVLPPYPAGELSRRVQAERLNGLVVSSGQGFEHLLQLAGDDWPALARLPLFVPSPRVAEQARAAGAQIVVDCRGASAAALLAALEQFPAAAL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0282 CDS 290357 291487 + protein of unknown function DUF513, hemX YP_001185788.1 146305323 5110252 PFAM: protein of unknown function DUF513, hemX Porphyrin and chlorophyll metabolism [KEGG] ; Metabolic pathways [KEGG] Cytoplasmic Membrane[Class 3] PF04375|HemX, HemX|4|363|3e-46 COG2959|HemX, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]. GTGAGCGAAGCAGCCACCCCGCAAACGCCAGAAGAAAAACCGGCCAGCGAGGCCGTGAACACCACCCCGACCCCGCCCGTGAAGCCAGCGCGCATTGGCGCCGCGACCGGGCTTGCCGCGTTCGCTCTGCTGATCGGCCTGGCCGGCGCTGGCGCCGGCGGCTGGAGCCTCTGGCAATTGCAGCAGATGCAGAGCAGGGATCAGCAGCAGGCCGAGGCCCTGCAGCGCACGCGCGACGACAGCGCGAAACAGCTTCAGGGACTGGCCCGGCAGCTCGATGCGCGGCTCGCCGAGCTGCCCAGTGCCTCCGAACTGAACGAACGGCGCCGCCTGCTGGCCAACCTGCAGTCCGATCAGCAGCGCCTCAGCCAGCGCCTGGAGTCGGTACTCGATGGCAGCCGCCAGGACTGGCGCCTGGACGAGGCCGAGCACCTGTTGCGCCTGGCCAGCCTGCGTCTGTCTGCCCTGCAGGACGTCGCCGGCGCCGAGGCCCTGGTGCTGACGGCCGATGACATCCTGCGCGAGCAGGACGATCCCGCCGCATTCGCCGCCCGTGAGCAGCTCAGCCGCAGCCTGGAAGCGCTGCGCACCACGCAGCGCCCGGACCGCGTCGGTCTGTTCCTGCAACTGGGCGCGCTGCGCGAGCAGGCCGCCACGCTCAATCCGCTGGCGCCGACCTTCGAAGGCCAGGGCGACGTGCTCTCCGACCTGGCTGCCGAGGGCGATGGCAGCGCCTGGTGGGGCGAATGGGTTAAGAAACTGTCGGAATACTTCCGCATCGAGTTCGACGCTGACCGCAACGTGCGGCCGCTGCTGTCCGGGCAAAGCCTGTCGCAGGTTCGCCTGAGCCTGTCGCTGGCGCTGGAGCAGGCGCAGTGGGCCGCCCTGCACGGCCAGACCGGCGTGTACCGGCAGGCGTTGAAGCAGGCGGAGGAGATCCTCGATGCCCACTTCAACCTGGACAACCCGGACAGCCGTGCCCTGCGCCAGCGCTTCGCCGAACTGGCGGACGCCACCGTCGAGGTCAAGGTGCCGGATCTGAGCGATTCGCTCGACGCGCTGCAGGCCTACCTGCACCGCAAGCAGGCGCAGCGCCGGCAGGGGGCCGCCGCGGCCGAGGAGGCGCAATGA MSEAATPQTPEEKPASEAVNTTPTPPVKPARIGAATGLAAFALLIGLAGAGAGGWSLWQLQQMQSRDQQQAEALQRTRDDSAKQLQGLARQLDARLAELPSASELNERRRLLANLQSDQQRLSQRLESVLDGSRQDWRLDEAEHLLRLASLRLSALQDVAGAEALVLTADDILREQDDPAAFAAREQLSRSLEALRTTQRPDRVGLFLQLGALREQAATLNPLAPTFEGQGDVLSDLAAEGDGSAWWGEWVKKLSEYFRIEFDADRNVRPLLSGQSLSQVRLSLSLALEQAQWAALHGQTGVYRQALKQAEEILDAHFNLDNPDSRALRQRFAELADATVEVKVPDLSDSLDALQAYLHRKQAQRRQGAAAAEEAQ Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0283 CDS 291484 292731 + HemY domain-containing protein YP_001185789.1 146305324 5110253 PFAM: HemY domain protein Cytoplasmic Membrane[Class 3] TIGR00540|hemY_coli|hemY protein|hypoth_equivalog|6.3e-35||Unknown function|General PF07219|HemY_N, HemY protein N-terminus|1|135|2e-23 COG3071|HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]. ATGAGACGCCTGCTCTGGCTTCTGGTACTGCTGGCCGTCGCAGCCGGCCTCTACCTGCTCCATCTGGCCATGGAGGCGGATCGCGGCTATGTGCTGTTCGCCTACCAGGGGTTTCGTTACCAGTCCGGCCTGTGGGCATTCCTCGGTTTGGTCCTGGCCGTGGTGGTGCTCTACTACCTGATCAAGTGGACATTGCGCCTGCTGCTCAGCTCGACTCGCCTGGCCAACCCCTGGTCGCGGCTGCATCGCAATCGTCGCGTGCGTCTGGCCTCCGAACAGGGCCTGCTGGATCTCGCCGAGGGCCGCTGGGCGCGTGCCCAGCGCCAGCTGACCCGCGCCGCCGAGGCCGACAGCCAGCCGCTGATGTATTACCTGGGCGCCGCGCGCGCGGCGAACAAGCTGGGTCAGCACGAACAGAGCGATGAGTTGCTCGAGCGAGCCCTGCACAAGCAGCCGCAGGCCGAGCTGGCCATTGCGCTCACCCATGCCGAACTGCAGCGCAGCCGCGGCGACAACGAGGCCGCGCTGGAAACCCTGCAGGTGATGCGCCAGCGGCACCCGGGGCATCACCTGGTGCTGCGTCAGCTGCAGCGCCTGTACCTGCAGCGCCAGGACTGGTCGGCTCTGCTGGGTCTGCTGCCCGAGCTGCGCAAGGAGAAGGCGCTGCCGGCGGCCGAAATCGACGAGCTGGAGCGCGAAACCTGGCGCGGCCGTCTCGCCGATGCCGGCCTTGCCGGTCAGGGCCAGGGCGAAACGGCGCTGCAGCCGCTGACCCAGGCCTGGCAGCAGCTTTCCGCGCCCCTGCGTCAGGAGCCAGAACTGGTCGCCACCTATGTCGAGCAACTGCGTCGTCTGGGAGCCCAGGAAGAAGCCGAGGAGGTGCTGCGCAGCACCCTCAAGCGCAGCTACGACAGCCGCCTCGCGCGGTTCTACGGTGTGCTGCGCGGCGCCGACCCGGCGCGTCAGCTGCAGACCGCCGAGCTCTGGCTCAAGCAGCATCCGCAGGACCCGGCCTTGCTCCTGACCCTGGGGCGGCTCTGCCTGCAGAACCAGCTGTGGGGCAAGGCGCGCGACTATTTCGAAACCAGTCTCAAGCTCGAACGCCATCCCGAGACCTGTGCCGAGCTGGCGCGTCTGCTGGCCCAGCTGGGTGAGCTGGAGCGCAGCAATCAGCTGTTGCTGGAAAGCCTCGGCCTGCTGCATCAGGGCCTGCCACCCTTGCCGCAACCGCAGGGCGCGAGCGCCTGA MRRLLWLLVLLAVAAGLYLLHLAMEADRGYVLFAYQGFRYQSGLWAFLGLVLAVVVLYYLIKWTLRLLLSSTRLANPWSRLHRNRRVRLASEQGLLDLAEGRWARAQRQLTRAAEADSQPLMYYLGAARAANKLGQHEQSDELLERALHKQPQAELAIALTHAELQRSRGDNEAALETLQVMRQRHPGHHLVLRQLQRLYLQRQDWSALLGLLPELRKEKALPAAEIDELERETWRGRLADAGLAGQGQGETALQPLTQAWQQLSAPLRQEPELVATYVEQLRRLGAQEEAEEVLRSTLKRSYDSRLARFYGVLRGADPARQLQTAELWLKQHPQDPALLLTLGRLCLQNQLWGKARDYFETSLKLERHPETCAELARLLAQLGELERSNQLLLESLGLLHQGLPPLPQPQGASA Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0284 CDS 292884 293375 + Disulphide bond formation protein DsbB YP_001185790.1 146305325 5110254 PFAM: Disulphide bond formation protein DsbB Cytoplasmic Membrane[Class 3] PF02600|DsbB, Disulfide bond formation protein DsbB|9|154|3e-12 COG1495|DsbB, Disulfide bond formation protein DsbB [Posttranslational modification, protein turnover, chaperones]. ATGCATCTGGCCAGTCCGCGTCCCCTGTTCTTCCTGGCATTTATCGGCTGCGTGCTGCTGATGGCGGCTGCCCTGTACCTTGAGCACGTCGTCGGCCTCGAGCCTTGCCCGATGTGCGTGCTGCAGCGCATCTGTGTGATCGCCTTCGGCGTCGTCTGCCTGCTGGCCGCCATTCATGGCCCCGCTCGCCTTGGCCGGCGCATCTATGCGCTGCTGGCGCTGCTGTTCGCCGGCGCCGGTGCCGCCACTGCCGGTCGGCAGATCTGGTTGCAGAGCGTGCCGGCCGACCAGCTCGAGGCCTGCCTGCCTAGCCTGGAATTCATGATGCAGGCCCTGCCGATGCAGGACATCGTGCGTCTGGTGTTCCAGGGCAGCGCCGACTGTGCCGAAGTGAAGTGGACGCTGTTCGGCATGAGCATCCCGGAATGGAGCCTGCTCGGCTTCATCGGCATGATCGGTTTCTGCCTGTTTCAGCTGCTGCGCCGCGGCTGA MHLASPRPLFFLAFIGCVLLMAAALYLEHVVGLEPCPMCVLQRICVIAFGVVCLLAAIHGPARLGRRIYALLALLFAGAGAATAGRQIWLQSVPADQLEACLPSLEFMMQALPMQDIVRLVFQGSADCAEVKWTLFGMSIPEWSLLGFIGMIGFCLFQLLRRG Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0285 CDS 293685 294158 + anti-RNA polymerase sigma 70 factor YP_001185791.1 146305326 5110255 PFAM: regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ; binds specifically to the major sigma factor sigma 70; active in stationary phase Cytoplasmic[Class 3] PF04353|Rsd_AlgQ, Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ|1|148|2e-50 COG3160|Rsd, Regulator of sigma D [Transcription]. ATGCTTGAGAGTTGCCAGAACGCACAGGAACGTTGGGGTGGGGTCCATCAGTTGATCGACCGCTGGCTGGGGGAGCGTCGCGAGCTTGTGCTGGCCTATACGGCGCTCAGCAAAGCACCGCAGGCGCCTGCCATCAACGGCGAAGCCCTGCAGGGCTTCTGCGAAATCCTCGTGGATTACGTATCGGCCGGTCACTTCGAGGTCTACGAGCAGCTCACCAGCGAGGCCAAGGCATTCAACGACAAGCGCGGCCTGGAATTGGCCAAGCAGATCTACCCGCGCATCGAAGCCATCACCGAGGTGGCGCTGGCTTTCAATGACCGCTGCGACAACGGCGACTGCCGTGACAGCGTGTCGTTGGTGGCGGAGCTGAACCGTCTGGGTCAGCTGCTGCACGAGCGTTTCGAACTGGAAGACTGCCTGATCGAGGTGTTGCACAACGCCCATCAGGAGCAGGCCGCCGAAGTCCTCTGA MLESCQNAQERWGGVHQLIDRWLGERRELVLAYTALSKAPQAPAINGEALQGFCEILVDYVSAGHFEVYEQLTSEAKAFNDKRGLELAKQIYPRIEAITEVALAFNDRCDNGDCRDSVSLVAELNRLGQLLHERFELEDCLIEVLHNAHQEQAAEVL Pseudomonas mendocina ymp NC_009439 Chromosome Pmen_0286 CDS 294216 294863 - peptidylprolyl isomerase, FKBP-type YP_001185792.1 146305327 5110256 PFAM: peptidylprolyl isomerase, FKBP-type Unknown[Class 3] PF00254|FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase|123|211|4e-20 ; PF01346|FKBP_N, Domain amino terminal to FKBP-type peptidyl-prolyl isomerase|6|116|2e-08 COG0545|FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]. ATGAGCCGCGCCGTACTAGCCGCCCTTGCTATCTGCTGCAGCCTGAGCGCGCAGGCCGACCAGCACCAGCAGGATCTGGCCTACAGCCTCGGCGTACGCCTTGGCGAGCGCCTGCATGAAGAGGTACCCGACCTGCCGCTGGGCGAACTGCTCGAAGGCTTGCGCCAGGCTTACGAGGGCAAGCCTCTGCGGCTCGATGCCGCGCGCATCGAGCAGCTGCTCGAGGAACACGAAGCCCGTATCGAGGCCTCGCCTCAACGTCATGACAAGGCCATCGAAGCCGAGCAGCGCTTTCTCGCCGGGGAAAGTCGCCGCCCCAACGTGCGGGAGCTGGGCAATGGCGTGCTGGTGACCGAGCTCAGCCCTGGCAGTGGCCCCAGGCCCACCGCCCGCAGCCGAGTGCAGGTGAGTTATCGCGGCGAGCTGGCCGACGGCAGCGTCTTCGACGAGAGCAGTACGCCACAGTGGTTTCGTCTGGACAGTCTGATCGCGGGCTGGCGCAGTGCGCTGCTGCAGATGCCGAAAGGCGCCCACTGGCGCCTGGTGATTCCATCGAATCAGGCTTACGGAGAAGAAGGCGCGGGTGATCTGATACCGCCCCATGCGCCCCTGGTGTTCGATCTACGCCTGCTGGACGTGACCGACTGA MSRAVLAALAICCSLSAQADQHQQDLAYSLGVRLGERLHEEVPDLPLGELLEGLRQAYEGKPLRLDAARIEQLLEEHEARIEASPQRHDKAIEAEQRFLAGESRRPNVRELGNGVLVTELSPGSGPRPTARSRVQVSYRGELADGSVFDESSTPQWFRLDSLIAGWRSALLQMPKGAHWRL