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Pathway Tools BLAST Search Page

This page allows users to submit a sequence to BLAST against the complete genome of a particular organism. The output contains links to the BioCyc pages for any genes or proteins that produce hits.

For more information about BLAST and the various options available, see the BLAST page at NCBI.

Select an organism to blast against:

Type of query sequence: Type of database to search against:

Program:

Enter your query sequence here in FASTA format:

Expectation Value Threshold:

Filter query sequence for low-complexity regions?

Query Genetic Codes (blastx only) 


  Matrix         Gap existence cost   Per residue gap cost    Lambda ratio     

Other advanced options:     

Quick Search      

Page generated by SRI International Pathway Tools version 12.5 on Sat Feb 4, 2012.
Pseudomonas aeruginosa PAO1 version 12.5.1.