Pseudomonas aeruginosa PAO1, PA3552 (arnB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1901760	beta-L-Ara4N-lipid A biosynthetic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	12704196	Reviewed by curator
Molecular Function	GO:0008483	transaminase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01167	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other PAO1 genes in this class Adaptation, Protection Other PAO1 genes in this class Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae01503	Cationic antimicrobial peptide (CAMP) resistance	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae00520	Amino sugar and nucleotide sugar metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR30244	TRANSAMINASE	IPR000653	DegT/DnrJ/EryC1/StrS aminotransferase	6	378	8.7E-106
Gene3D	G3DSA:3.90.1150.10	Aspartate Aminotransferase, domain 1	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	254	382	7.7E-38
FunFam	G3DSA:3.40.640.10:FF:000040	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	-	-	2	253	0.0
PIRSF	PIRSF000390	PLP_StrS	IPR000653	DegT/DnrJ/EryC1/StrS aminotransferase	1	382	2.2E-109
Pfam	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family	IPR000653	DegT/DnrJ/EryC1/StrS aminotransferase	12	374	2.3E-122
FunFam	G3DSA:3.90.1150.10:FF:000030	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	-	-	254	381	7.5E-52
Hamap	MF_01167	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB].	IPR022850	UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB	2	380	67.76358
Gene3D	G3DSA:3.40.640.10	-	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	2	253	1.8E-93
SUPERFAMILY	SSF53383	PLP-dependent transferases	IPR015424	Pyridoxal phosphate-dependent transferase	5	378	1.26E-111
CDD	cd00616	AHBA_syn	IPR000653	DegT/DnrJ/EryC1/StrS aminotransferase	17	375	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.