Pseudomonas aeruginosa PAO1, PA3553 (arnC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1901760	beta-L-Ara4N-lipid A biosynthetic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	15695810	Reviewed by curator
Molecular Function	GO:0016757	transferase activity, transferring glycosyl groups	ISS Inferred from Sequence or Structural Similarity Term mapped from: CAZy:GT2	ECO:0000250 sequence similarity evidence used in manual assertion	18838391	Reviewed by curator
Molecular Function	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01164	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016757	transferase activity, transferring glycosyl groups	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01164	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0046677	response to antibiotic	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01164	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009245	lipid A biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01164	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class Antibiotic resistance and susceptibility Other PAO1 genes in this class Putative enzymes Other PAO1 genes in this class Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae00520	Amino sugar and nucleotide sugar metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae01503	Cationic antimicrobial peptide (CAMP) resistance	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	IPR029044	Nucleotide-diphospho-sugar transferases	6	233	3.3E-41
FunFam	G3DSA:3.90.550.10:FF:000019	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	-	-	3	229	1.3E-127
CDD	cd04187	DPM1_like_bac	-	-	11	187	2.15007E-81
PANTHER	PTHR48090	UNDECAPRENYL-PHOSPHATE 4-DEOXY-4-FORMAMIDO-L-ARABINOSE TRANSFERASE-RELATED	-	-	8	317	2.8E-92
Pfam	PF00535	Glycosyl transferase family 2	IPR001173	Glycosyltransferase 2-like	10	172	2.9E-32
Hamap	MF_01164	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC].	IPR022857	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	1	327	63.69202
SUPERFAMILY	SSF53448	Nucleotide-diphospho-sugar transferases	IPR029044	Nucleotide-diphospho-sugar transferases	8	255	1.39E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.