Pseudomonas stutzeri A1501, PST_0006

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.490.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019825 oxygen binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.490.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 293 453 7.0E-49
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 298 454 9.42E-46
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 287 454 3.2E-48
Pfam PF11563 Protoglobin IPR044398 Globin-sensor domain 23 160 3.6E-10
SMART SM00267 duf1_3 IPR000160 GGDEF domain 281 454 8.2E-59
Gene3D G3DSA:1.10.490.10 Globins IPR012292 Globin/Protoglobin 3 155 4.7E-35
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 231 454 1.9E-57
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 295 450 4.6E-45
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 296 456 9.8E-53
CDD cd01949 GGDEF IPR000160 GGDEF domain 295 452 5.1901E-57
SUPERFAMILY SSF46458 Globin-like IPR009050 Globin-like superfamily 26 130 4.32E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.