Pseudomonas aeruginosa LESB58, PALES_00011 (dnaN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008408 3'-5' exonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02768
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003887 DNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02768
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000804
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009360 DNA polymerase III complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000804
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000804
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Pyrimidine metabolism ECO:0000037
not_recorded
PseudoCAP Purine metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.150.10 124 248 8.4E-41
Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain IPR022634 DNA polymerase III, beta sliding clamp, N-terminal 1 119 8.3E-42
Gene3D G3DSA:3.10.150.10 1 123 2.2E-50
CDD cd00140 beta_clamp IPR001001 DNA polymerase III, beta sliding clamp 1 366 2.32621E-158
Pfam PF02767 DNA polymerase III beta subunit, central domain IPR022637 DNA polymerase III, beta sliding clamp, central 130 244 1.6E-39
SUPERFAMILY SSF55979 126 245 3.14E-31
PIRSF PIRSF000804 IPR001001 DNA polymerase III, beta sliding clamp 1 367 3.5E-125
SMART SM00480 IPR001001 DNA polymerase III, beta sliding clamp 17 363 0.0
TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit IPR001001 DNA polymerase III, beta sliding clamp 1 367 7.3E-111
Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain IPR022635 DNA polymerase III, beta sliding clamp, C-terminal 247 366 4.2E-41
SUPERFAMILY SSF55979 1 120 3.14E-29
SUPERFAMILY SSF55979 246 367 7.25E-38
Gene3D G3DSA:3.10.150.10 249 367 1.2E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.