Pseudomonas aeruginosa PAO1, PA0048

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA0048
Name
Replicon	chromosome
Genomic location	62403 - 62786 (- strand)
Transposon Mutants	2 transposon mutants in PAO1
Transposon Mutants in orthologs	1 transposon mutants in orthologs

Cross-References

RefSeq	NP_248738.1
GI	15595246
Affymetrix	PA0048_at
Entrez	877666
GenBank	AAG03438.1
INSDC	AAG03438.1
NCBI Locus Tag	PA0048
protein_id(GenBank)	gb|AAG03438.1|AE004444_7|gnl|PseudoCAP|PA0048
TIGR	NTL03PA00049
UniParc	UPI00000C4F02
UniProtKB Acc	Q9I784
UniProtKB ID	Q9I784_PSEAE
UniRef100	UniRef100_W1MX70
UniRef50	UniRef50_B7V0T5
UniRef90	UniRef90_B7V0T5

Product

Feature Type	CDS
Coding Frame	1
Product Name	probable transcriptional regulator Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7)	5.41
Kyte-Doolittle Hydrophobicity Value	-0.302
Molecular Weight (kDa)	14.4
Isoelectric Point (pI)	10.56

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 27 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000048 (298 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA0048 Search term: probable transcriptional regulator

Human Homologs

References