Pseudomonas aeruginosa PAO1, PA3558 (arnF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA3558
Name
arnF
Synonym: arnF
Synonym: pmrM
Replicon chromosome
Genomic location 3986880 - 3987293 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_252248.1
GI 15598754
Affymetrix PA3558_at
DNASU PaCD00007560
Entrez 879133
GenBank AAG06946.1
INSDC AAG06946.1
NCBI Locus Tag PA3558
protein_id(GenBank) gb|AAG06946.1|AE004776_9|gnl|PseudoCAP|PA3558
TIGR NTL03PA03558
UniParc UPI000013C2D0
UniProtKB Acc Q9HY59
UniProtKB ID ARNF_PSEAE
UniRef100 UniRef100_Q9HY59
UniRef50 UniRef50_Q9HY59
UniRef90 UniRef90_Q9HY59

Product

Feature Type CDS
Coding Frame 1
Product Name
ArnF
Product Name Confidence: Class 4
Synonyms ArnF
Evidence for Translation
Charge (pH 7) 7.67
Kyte-Doolittle Hydrophobicity Value 0.627
Molecular Weight (kDa) 14.3
Isoelectric Point (pI) 10.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 36 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002108 (420 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3558
Search term: arnF
Search term: ArnF

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
PmrA-PmrB-regulated genes necessary for 4-aminoarabinose lipid A modification and polymyxin resistance.
Gunn JS, Lim KB, Krueger J, Kim K, Guo L, Hackett M, Miller SI
Mol. Microbiol. 1998 Mar;27(6):1171-82
PubMed ID: 9570402
An undecaprenyl phosphate-aminoarabinose flippase required for polymyxin resistance in Escherichia coli.
Yan A, Guan Z, Raetz CR
J. Biol. Chem. 2007 Dec;282(49):36077-89
PubMed ID: 17928292