Motif View

Internal ID 17655626
Source Database TransTermHP TERM 44
Feature Type terminator
Name
Rho-independent transcription terminator TERM 44
Sequence CGACGGGCCCGGACGACTTGGGGCCCGTCG
Look for more occurrences
Start 252861
End 252890
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGTCGGCAAAAAAAA(5' tail) CGACGGGCCCCAA(5' stem) GTCG(loop) TCCGGGCCCGTCG(3' stem) GGTCAAAGCGCTGAC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685