Strain Overview | |
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Organism Name | Pseudomonas abyssi MT5 |
Species | Pseudomonas abyssi |
Strain | MT5 |
Description/Title | Microbe sample from Pseudomonas abyssi |
Annotated Genes | 3975 |
Partial Genes | 81 |
Host Information |
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Geographic Location | |
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Isolation Source | Deep Sea Water |
Sample Provider | |
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Name | Yunping Xu |
yl_wei@shou.edu.cn | |
Institution | Shanghai Ocean University |
Date Collected |
Database | Scheme | Sequence Type | Alleles | |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | 79 |
Contig N50 | 236029 |
Assembly Level | Contig |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN07634961 |
NCBI Taxonomy ID | 170540 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |