Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
Locus Tag |
PA14_65310
|
Name |
hfq
|
Replicon | chromosome |
Genomic location | 5819787 - 5820035 (- strand) |
RefSeq | YP_793412.1 |
GI | 116053093 |
Entrez | 4384847 |
INSDC | ABJ14329.1 |
NCBI Locus Tag | PA14_65310 |
UniParc | UPI000012C6A3 |
UniProtKB Acc | Q02F74 |
UniProtKB ID | HFQ_PSEAB |
UniRef100 | UniRef100_A6VD57 |
UniRef50 | UniRef50_Q9ZI76 |
UniRef90 | UniRef90_Q4KJ73 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA-binding protein Hfq
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 3.46 |
Kyte-Doolittle Hydrophobicity Value | -0.244 |
Molecular Weight (kDa) | 9.1 |
Isoelectric Point (pI) | 10.00 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4J5Y | RNA BINDING PROTEIN | 02/11/13 | Crystal structure of Hfq from Pseudomonas aeruginosa in complex with ATP | Pseudomonas aeruginosa | 2.0953 | X-RAY DIFFRACTION | 100.0 |
8BVH | RNA BINDING PROTEIN | 12/03/22 | Cryo-EM structure of the Hfq-Crc-amiE translation repression assembly. | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 3.6 | ELECTRON MICROSCOPY | 100.0 |
3QUI | RNA BINDING PROTEIN | 02/24/11 | Crystal structure of Pseudomonas aeruginosa Hfq in complex with ADPNP | Pseudomonas aeruginosa | 1.933 | X-RAY DIFFRACTION | 100.0 |
8BVJ | RNA BINDING PROTEIN | 12/04/22 | Hfq-Crc-estA translation repression complex | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 4.5 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 282 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004559 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_65310
Search term: hfq
Search term: RNA-binding protein Hfq
|