Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3744
|
Name |
rimM
|
Replicon | chromosome |
Genomic location | 4196165 - 4196692 (- strand) |
RefSeq | NP_252433.1 |
GI | 15598939 |
Affymetrix | PA3744_rimM_at |
DNASU | PaCD00007634 |
Entrez | 880358 |
GenBank | AAG07131.1 |
INSDC | AAG07131.1 |
NCBI Locus Tag | PA3744 |
protein_id(GenBank) | gb|AAG07131.1|AE004793_8|gnl|PseudoCAP|PA3744 |
TIGR | NTL03PA03744 |
UniParc | UPI0000133914 |
UniProtKB Acc | Q9HXQ0 |
UniProtKB ID | RIMM_PSEAE |
UniRef100 | UniRef100_Q9HXQ0 |
UniRef50 | UniRef50_Q9HXQ0 |
UniRef90 | UniRef90_Q9HXQ0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
16S rRNA processing protein
|
Synonyms |
RimM |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -8.37 |
Kyte-Doolittle Hydrophobicity Value | -0.263 |
Molecular Weight (kDa) | 19.8 |
Isoelectric Point (pI) | 4.62 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
2F1L | UNKNOWN FUNCTION | 11/14/05 | CRYSTAL STRUCTURE OF A PUTATIVE 16S RIBOSOMAL RNA PROCESSING PROTEIN RIMM (PA3744) FROM PSEUDOMONAS AERUGINOSA AT 2.46 A RESOLUTION | Pseudomonas aeruginosa | 2.46 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 469 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001938 (537 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3744
Search term: rimM
Search term: 16S rRNA processing protein
|
The nucleotide sequence of an Escherichia coli operon containing genes for the tRNA(m1G)methyltransferase, the ribosomal proteins S16 and L19 and a 21-K polypeptide.
Byström AS, Hjalmarsson KJ, Wikström PM, Björk GR
EMBO J 1983;2(6):899-905
PubMed ID: 6357787
|
RimM and RbfA are essential for efficient processing of 16S rRNA in Escherichia coli.
Bylund GO, Wipemo LC, Lundberg LA, Wikström PM
J Bacteriol 1998 Jan;180(1):73-82
PubMed ID: 9422595
|