Pseudomonas aeruginosa PAO1, PA3898

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3898
Name
Replicon chromosome
Genomic location 4366301 - 4367182 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 4 transposon mutants in orthologs

Cross-References

RefSeq NP_252587.1
GI 15599093
Affymetrix PA3898_at
DNASU PaCD00007698
Entrez 878895
GenBank AAG07285.1
INSDC AAG07285.1
NCBI Locus Tag PA3898
protein_id(GenBank) gb|AAG07285.1|AE004807_4|gnl|PseudoCAP|PA3898
TIGR NTL03PA03898
UniParc UPI00000C5B66
UniProtKB Acc Q9HXB5
UniProtKB ID Q9HXB5_PSEAE
UniRef100 UniRef100_Q9HXB5
UniRef50 UniRef50_Q4KI03
UniRef90 UniRef90_Q9HXB5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 3.66
Kyte-Doolittle Hydrophobicity Value -0.430
Molecular Weight (kDa) 33.3
Isoelectric Point (pI) 7.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 427 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000722 (1221 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3898

Human Homologs

References

No references are associated with this feature.