Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3940
|
Name |
|
Replicon | chromosome |
Genomic location | 4418303 - 4418584 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
RefSeq | NP_252629.1 |
GI | 15599135 |
Affymetrix | PA3940_at |
Entrez | 878829 |
GenBank | AAG07327.1 |
INSDC | AAG07327.1 |
NCBI Locus Tag | PA3940 |
protein_id(GenBank) | gb|AAG07327.1|AE004812_2|gnl|PseudoCAP|PA3940 |
TIGR | NTL03PA03940 |
UniParc | UPI00000CAAFC |
UniProtKB Acc | Q9HX76 |
UniProtKB ID | Q9HX76_PSEAE |
UniRef100 | UniRef100_W0YXW8 |
UniRef50 | UniRef50_D8P884 |
UniRef90 | UniRef90_W0YXW8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable DNA binding protein
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by two-dimensional gel electrophoresis, mass spectral analysis and protein mass mapping (PMID:21863142).
Detected by iTRAQ (PMID:21863142).
|
Charge (pH 7) | 0.99 |
Kyte-Doolittle Hydrophobicity Value | -0.245 |
Molecular Weight (kDa) | 9.9 |
Isoelectric Point (pI) | 9.18 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 536 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001736 (503 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3940
Search term: probable DNA binding protein
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|