Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3992
|
Name |
sltB3
Synonym: soluble lytic (exolytic) transglycosylase |
Replicon | chromosome |
Genomic location | 4472131 - 4473477 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252681.1 |
GI | 15599187 |
Affymetrix | PA3992_at |
Entrez | 878935 |
GenBank | AAG07379.1 |
INSDC | AAG07379.1 |
NCBI Locus Tag | PA3992 |
protein_id(GenBank) | gb|AAG07379.1|AE004817_3|gnl|PseudoCAP|PA3992 |
TIGR | NTL03PA03992 |
UniParc | UPI00000C5BB6 |
UniProtKB Acc | Q9HX28 |
UniProtKB ID | Q9HX28_PSEAE |
UniRef100 | UniRef100_Q9HX28 |
UniRef50 | UniRef50_W9V004 |
UniRef90 | UniRef90_Q9HX28 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
SltB3
|
Synonyms |
hypothetical protein |
Evidence for Translation |
Detected using LC-MS/MS (47.76 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | 2.87 |
Kyte-Doolittle Hydrophobicity Value | -0.216 |
Molecular Weight (kDa) | 47.8 |
Isoelectric Point (pI) | 8.22 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5AO7 | TRANSFERASE | 09/09/15 | Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide | PSEUDOMONAS AERUGINOSA | 2.09 | X-RAY DIFFRACTION | 100.0 |
5AO8 | TRANSFERASE | 09/09/15 | Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-NAM-pentapeptide | PSEUDOMONAS AERUGINOSA | 2.23 | X-RAY DIFFRACTION | 99.8 |
5ANZ | HYDROLASE | 09/09/15 | Crystal Structure of SltB3 from Pseudomonas aeruginosa. | PSEUDOMONAS AERUGINOSA | 1.614 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 226 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001689 (532 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3992
Search term: sltB3
Search term: SltB3
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|
Characterization of soluble and membrane-bound family 3 lytic transglycosylases from Pseudomonas aeruginosa.
Blackburn NT, Clarke AJ
Biochemistry 2002 Jan 22;41(3):1001-13
PubMed ID: 11790124
|