Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4002
|
Name |
rodA
Synonym: mrdB |
Replicon | chromosome |
Genomic location | 4482261 - 4483364 (- strand) |
RefSeq | NP_252691.1 |
GI | 15599197 |
Affymetrix | PA4002_rodA_at |
Entrez | 878947 |
GenBank | AAG07389.1 |
INSDC | AAG07389.1 |
NCBI Locus Tag | PA4002 |
protein_id(GenBank) | gb|AAG07389.1|AE004817_13|gnl|PseudoCAP|PA4002 |
TIGR | NTL03PA04002 |
UniParc | UPI00000D4286 |
UniProtKB Acc | G3XD88 |
UniProtKB ID | G3XD88_PSEAE |
UniRef100 | UniRef100_W0YW74 |
UniRef50 | UniRef50_P44468 |
UniRef90 | UniRef90_A6V0A8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
rod shape-determining protein
|
Synonyms |
RodA protein |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 11.87 |
Kyte-Doolittle Hydrophobicity Value | 0.847 |
Molecular Weight (kDa) | 40.0 |
Isoelectric Point (pI) | 10.32 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 575 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001681 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4002
Search term: rodA
Search term: rod shape-determining protein
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Molecular cloning and characterization of the genes (pbpA and rodA) responsible for the rod shape of Escherichia coli K-12: analysis of gene expression with transposon Tn5 mutagenesis and protein synthesis directed by constructed plasmids.
Asoh S, Matsuzawa H, Matsuhashi M, Ohta T
J Bacteriol 1983 Apr;154(1):10-6
PubMed ID: 6300030
|
Identification of the rodA gene product of Escherichia coli.
Stoker NG, Pratt JM, Spratt BG
J Bacteriol 1983 Aug;155(2):854-9
PubMed ID: 6348029
|