Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4005
|
Name |
Synonym: ybeB |
Replicon | chromosome |
Genomic location | 4485824 - 4486180 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252694.1 |
GI | 15599200 |
Affymetrix | PA4005_at |
DNASU | PaCD00007747 |
Entrez | 878974 |
GenBank | AAG07392.1 |
INSDC | AAG07392.1 |
NCBI Locus Tag | PA4005 |
protein_id(GenBank) | gb|AAG07392.1|AE004817_16|gnl|PseudoCAP|PA4005 |
TIGR | NTL03PA04005 |
UniParc | UPI00000C5BBB |
UniProtKB Acc | Q9HX22 |
UniProtKB ID | Q9HX22_PSEAE |
UniRef100 | UniRef100_Q02SH2 |
UniRef50 | UniRef50_Q02SH2 |
UniRef90 | UniRef90_Q02SH2 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
conserved hypothetical protein
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by iTRAQ (PMID:21863142).
|
Charge (pH 7) | -8.56 |
Kyte-Doolittle Hydrophobicity Value | -0.310 |
Molecular Weight (kDa) | 13.1 |
Isoelectric Point (pI) | 4.29 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 565 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001678 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4005
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
E-value:
1.1e-10
Percent Identity:
32.8
|
Nucleotide sequence of the pbpA gene and characteristics of the deduced amino acid sequence of penicillin-binding protein 2 of Escherichia coli K12.
Asoh S, Matsuzawa H, Ishino F, Strominger JL, Matsuhashi M, Ohta T
Eur J Biochem 1986 Oct 15;160(2):231-8
PubMed ID: 3533535
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|