Pseudomonas aeruginosa PAO1, PA3555 (arnD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1901760	beta-L-Ara4N-lipid A biosynthetic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	15695810	Reviewed by curator
Biological Process	GO:0005975	carbohydrate metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01522	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01522	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01870	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other PAO1 genes in this class Cell wall / LPS / capsule Other PAO1 genes in this class Adaptation, Protection Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae00520	Amino sugar and nucleotide sugar metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae01503	Cationic antimicrobial peptide (CAMP) resistance	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01522	Polysaccharide deacetylase	IPR002509	NodB homology domain	15	170	2.9E-13
PANTHER	PTHR10587	GLYCOSYL TRANSFERASE-RELATED	-	-	4	268	3.4E-22
Hamap	MF_01870	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD].	IPR023557	4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable	1	295	65.719795
Gene3D	G3DSA:3.20.20.370	Glycoside hydrolase/deacetylase	-	-	4	266	1.7E-26
SUPERFAMILY	SSF88713	Glycoside hydrolase/deacetylase	IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel	14	266	2.78E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.