Pseudomonas aeruginosa PAO1, PA3556 (arnT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: CAZy:GT83
ECO:0000250
sequence similarity evidence used in manual assertion
18838391 Reviewed by curator
Biological Process GO:0046677 response to antibiotic
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
11535604 Reviewed by curator
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
11535604 Reviewed by curator
Biological Process GO:1901760 beta-L-Ara4N-lipid A biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
11535604 Reviewed by curator
Cellular Component GO:0016020 membrane
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
11535604 Reviewed by curator
Molecular Function GO:0016763 transferase activity, transferring pentosyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01165
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02366
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006493 protein O-linked glycosylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02366
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000030 mannosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02366
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00540 Lipopolysaccharide biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 1 547 41.392
Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IPR003342 Glycosyl transferase family 39/83 10 236 3.7E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.