Pseudomonas aeruginosa LESB58, PALES_00071 (glyS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004820 glycine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004814 arginine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00836
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006426 glycyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006420 arginyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00836
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other LESB58 genes in this class
Amino acid biosynthesis and metabolism Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Glycine, serine and threonine metabolism ECO:0000037
not_recorded
PseudoCAP Aminoacyl-tRNA biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 389 408 2.6E-35
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 313 329 2.6E-35
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 50 62 2.6E-35
NCBIfam TIGR00211 JCVI: glycine--tRNA ligase subunit beta IPR015944 Glycine-tRNA ligase, beta subunit 5 683 0.0
Pfam PF02092 Glycyl-tRNA synthetase beta subunit IPR015944 Glycine-tRNA ligase, beta subunit 6 544 0.0
SMART SM00836 dalr_1_4 IPR008909 DALR anticodon binding 580 683 0.0029
Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. IPR015944 Glycine-tRNA ligase, beta subunit 3 683 25.440411
Pfam PF05746 DALR anticodon binding domain IPR008909 DALR anticodon binding 577 671 1.3E-6
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 241 256 2.6E-35
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 334 485 4.5E-17
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 7 20 2.6E-35
PANTHER PTHR30075 GLYCYL-TRNA SYNTHETASE IPR006194 Glycine-tRNA synthetase, heterodimeric 3 683 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.