Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0602
|
Name |
|
Replicon | chromosome |
Genomic location | 663515 - 664549 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | Structural similarity to 4I1D (ABC transporter substrate-binding protein from Bradyrhizobium japonicum, root-mean-square deviation: 0.8 angstroms). Sequence similarity to 4EUO (91%/33,44%) (ABU). Final predicted ligand: gamma-aminobutyric acid (PMID: 31631799) |
RefSeq | NP_249293.1 |
GI | 15595799 |
Affymetrix | PA0602_at |
DNASU | PaCD00006264 |
Entrez | 880771 |
GenBank | AAG03991.1 |
INSDC | AAG03991.1 |
NCBI Locus Tag | PA0602 |
protein_id(GenBank) | gb|AAG03991.1|AE004496_7|gnl|PseudoCAP|PA0602 |
TIGR | NTL03PA00603 |
UniParc | UPI00000C50D2 |
UniProtKB Acc | Q9I5T6 |
UniProtKB ID | Q9I5T6_PSEAE |
UniRef100 | UniRef100_A0A072ZQF2 |
UniRef50 | UniRef50_A9QZV4 |
UniRef90 | UniRef90_A0A086C223 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable binding protein component of ABC transporter
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | 0.87 |
Kyte-Doolittle Hydrophobicity Value | -0.177 |
Molecular Weight (kDa) | 37.8 |
Isoelectric Point (pI) | 7.50 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 142 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000585 (305 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0602
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|