Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5557
|
Name |
atpH
Synonym: uncH Synonym: papE |
Replicon | chromosome |
Genomic location | 6252159 - 6252695 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
RefSeq | NP_254244.1 |
GI | 15600750 |
Affymetrix | PA5557_atpH_at |
DNASU | PaCD00007315 |
Entrez | 878509 |
GenBank | AAG08942.1 |
INSDC | AAG08942.1 |
NCBI Locus Tag | PA5557 |
protein_id(GenBank) | gb|AAG08942.1|AE004967_13|gnl|PseudoCAP|PA5557 |
TIGR | NTL03PA05558 |
UniParc | UPI00000C6071 |
UniProtKB Acc | Q9HT17 |
UniProtKB ID | ATPD_PSEAE |
UniRef100 | UniRef100_A6VF35 |
UniRef50 | UniRef50_A6VF35 |
UniRef90 | UniRef90_A6VF35 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ATP synthase delta chain
|
Synonyms | |
Evidence for Translation |
Detected using LC-MS/MS (19.26 kDa, PMID:21751344)
Detected by two-dimensional gel electrophoresis and mass spectral analysis(PMID:21863142).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.55 |
Kyte-Doolittle Hydrophobicity Value | -0.142 |
Molecular Weight (kDa) | 19.3 |
Isoelectric Point (pI) | 5.85 |
Individual Mappings | |
Additional evidence for subcellular localization |
Detetected in a periplasmic protein preparation by spheroplasting by osmotic shock.(PMID:19333994)
|
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 459 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005088 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5557
Search term: atpH
Search term: ATP synthase delta chain
|
The atp operon: nucleotide sequence of the promoter and the genes for the membrane proteins, and the delta subunit of Escherichia coli ATP-synthase.
Gay NJ, Walker JE
Nucleic Acids Res 1981 Aug 25;9(16):3919-26
PubMed ID: 6272190
|
Solution structure of the N-terminal domain of the delta subunit of the E. coli ATPsynthase.
Wilkens S, Dunn SD, Chandler J, Dahlquist FW, Capaldi RA
Nat Struct Biol 1997 Mar;4(3):198-201
PubMed ID: 9164460
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|