Pseudomonas aeruginosa PAO1, PA3555 (arnD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA3555
Name
arnD
Synonym: arnD
Synonym: amrJ
Replicon chromosome
Genomic location 3984006 - 3984893 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_252245.1
GI 15598751
Affymetrix PA3555_at
Entrez 879121
GenBank AAG06943.1
INSDC AAG06943.1
NCBI Locus Tag PA3555
protein_id(GenBank) gb|AAG06943.1|AE004776_6|gnl|PseudoCAP|PA3555
TIGR NTL03PA03555
UniParc UPI00000C5A66
UniProtKB Acc Q9HY62
UniProtKB ID ARND_PSEAE
UniRef100 UniRef100_B7VBN1
UniRef50 UniRef50_O52326
UniRef90 UniRef90_B7VBN1

Product

Feature Type CDS
Coding Frame 1
Product Name
ArnD
Product Name Confidence: Class 2
Synonyms ArnD
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 9.60
Kyte-Doolittle Hydrophobicity Value -0.285
Molecular Weight (kDa) 32.9
Isoelectric Point (pI) 10.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002111 (427 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3555
Search term: arnD
Search term: ArnD

Human Homologs

References

PmrA-PmrB-regulated genes necessary for 4-aminoarabinose lipid A modification and polymyxin resistance.
Gunn JS, Lim KB, Krueger J, Kim K, Guo L, Hackett M, Miller SI
Mol. Microbiol. 1998 Mar;27(6):1171-82
PubMed ID: 9570402