Pseudomonas aeruginosa PAO1, PA3555 (arnD)

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA3555
Name	arnD Synonym: arnD Synonym: amrJ
Replicon	chromosome
Genomic location	3984006 - 3984893 (+ strand)
Transposon Mutants	2 transposon mutants in PAO1

Cross-References

RefSeq	NP_252245.1
GI	15598751
Affymetrix	PA3555_at
Entrez	879121
GenBank	AAG06943.1
INSDC	AAG06943.1
NCBI Locus Tag	PA3555
protein_id(GenBank)	gb|AAG06943.1|AE004776_6|gnl|PseudoCAP|PA3555
TIGR	NTL03PA03555
UniParc	UPI00000C5A66
UniProtKB Acc	Q9HY62
UniProtKB ID	ARND_PSEAE
UniRef100	UniRef100_B7VBN1
UniRef50	UniRef50_O52326
UniRef90	UniRef90_B7VBN1

Product

Feature Type	CDS
Coding Frame	1
Product Name	ArnD Product Name Confidence: Class 2
Synonyms	ArnD
Evidence for Translation	Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7)	9.60
Kyte-Doolittle Hydrophobicity Value	-0.285
Molecular Weight (kDa)	32.9
Isoelectric Point (pI)	10.39

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002111 (416 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA3555 Search term: arnD Search term: ArnD

Human Homologs

References

PmrA-PmrB-regulated genes necessary for 4-aminoarabinose lipid A modification and polymyxin resistance. Gunn JS, Lim KB, Krueger J, Kim K, Guo L, Hackett M, Miller SI Mol Microbiol 1998 Mar;27(6):1171-82 PubMed ID: 9570402